HEADER CALCIUM BINDING PROTEIN 24-OCT-16 5M6C TITLE CRYSTAL STRUCTURE OF T71N MUTANT OF HUMAN HIPPOCALCIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEURON-SPECIFIC CALCIUM-BINDING PROTEIN HIPPOCALCIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CALCIUM-BINDING PROTEIN BDR-2; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: NEURON-SPECIFIC CALCIUM-BINDING PROTEIN HIPPOCALCIN; COMPND 9 CHAIN: E; COMPND 10 SYNONYM: CALCIUM-BINDING PROTEIN BDR-2; COMPND 11 ENGINEERED: YES; COMPND 12 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HPCA, BDR2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PE-SUMO; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: HPCA, BDR2; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PE-SUMO KEYWDS CALCIUM BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.HELASSA,S.V.ANTONYUK,L.Y.LIAN,L.P.HAYNES,R.D.BURGOYNE REVDAT 5 17-JAN-24 5M6C 1 LINK REVDAT 4 12-JUN-19 5M6C 1 AUTHOR REVDAT 3 05-JUL-17 5M6C 1 JRNL REVDAT 2 19-APR-17 5M6C 1 JRNL REVDAT 1 12-APR-17 5M6C 0 JRNL AUTH N.HELASSA,S.V.ANTONYUK,L.Y.LIAN,L.P.HAYNES,R.D.BURGOYNE JRNL TITL BIOPHYSICAL AND FUNCTIONAL CHARACTERIZATION OF HIPPOCALCIN JRNL TITL 2 MUTANTS RESPONSIBLE FOR HUMAN DYSTONIA. JRNL REF HUM. MOL. GENET. V. 26 2426 2017 JRNL REFN ESSN 1460-2083 JRNL PMID 28398555 JRNL DOI 10.1093/HMG/DDX133 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.30 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 7856 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.283 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 426 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 592 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.19 REMARK 3 BIN R VALUE (WORKING SET) : 0.3480 REMARK 3 BIN FREE R VALUE SET COUNT : 19 REMARK 3 BIN FREE R VALUE : 0.3200 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2994 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 13 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 62.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 78.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.35000 REMARK 3 B22 (A**2) : -0.35000 REMARK 3 B33 (A**2) : 1.14000 REMARK 3 B12 (A**2) : -0.18000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.538 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.551 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 31.597 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.934 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.861 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3063 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4119 ; 1.139 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 367 ; 4.516 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 160 ;38.412 ;24.375 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 573 ;16.189 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;11.751 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 435 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2337 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1468 ; 1.813 ; 7.852 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1832 ; 3.196 ;11.769 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1595 ; 1.684 ; 7.847 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4503 ; 7.288 ;63.901 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 7 187 E 7 187 532 0.08 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 5M6C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-OCT-16. REMARK 100 THE DEPOSITION ID IS D_1200002013. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 300K REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8283 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 47.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 2.700 REMARK 200 R MERGE (I) : 0.12200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.57000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5G4P REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CITRATE TRIBASIC REMARK 280 DIHYDRATE PH 5.5, 18% V/V 2-PROPANOL, 16% W/V PEG 4000, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 94.68700 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 189.37400 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 142.03050 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 236.71750 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 47.34350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 LYS A 3 REMARK 465 GLN A 4 REMARK 465 ASN A 5 REMARK 465 SER A 189 REMARK 465 ALA A 190 REMARK 465 SER A 191 REMARK 465 GLN A 192 REMARK 465 PHE A 193 REMARK 465 MET E 1 REMARK 465 GLY E 2 REMARK 465 LYS E 3 REMARK 465 GLN E 4 REMARK 465 ASN E 5 REMARK 465 SER E 6 REMARK 465 SER E 191 REMARK 465 GLN E 192 REMARK 465 PHE E 193 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 63 CD CE NZ REMARK 470 GLU A 142 CG CD OE1 OE2 REMARK 470 LYS E 137 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 138 170.08 74.88 REMARK 500 PRO A 139 -121.32 -77.21 REMARK 500 GLU A 140 -43.18 -149.31 REMARK 500 SER A 143 21.49 -78.41 REMARK 500 MET A 156 -42.16 -135.55 REMARK 500 SER E 76 70.57 67.60 REMARK 500 SER E 188 95.36 -65.60 REMARK 500 SER E 189 -42.01 -131.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 73 OD1 REMARK 620 2 ASN A 75 OD1 75.0 REMARK 620 3 ASP A 77 OD1 80.9 79.3 REMARK 620 4 THR A 79 O 81.6 153.9 85.8 REMARK 620 5 GLU A 84 OE1 96.5 89.2 168.5 105.0 REMARK 620 6 HOH E 305 O 160.6 97.8 80.0 100.6 101.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 203 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 109 OD1 REMARK 620 2 ASP A 111 OD1 87.2 REMARK 620 3 ASN A 113 OD1 80.9 72.9 REMARK 620 4 TYR A 115 O 95.2 158.3 86.2 REMARK 620 5 GLU A 120 OE1 119.9 123.4 151.7 73.7 REMARK 620 6 GLU A 120 OE2 104.4 82.1 154.3 117.8 45.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 157 OD1 REMARK 620 2 ASN A 159 OD1 94.2 REMARK 620 3 ASP A 161 OD1 83.2 66.0 REMARK 620 4 LYS A 163 O 82.7 139.8 73.8 REMARK 620 5 GLU A 168 OE1 115.7 129.4 150.9 86.4 REMARK 620 6 GLU A 168 OE2 93.9 95.2 160.6 124.9 46.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA E 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP E 73 OD1 REMARK 620 2 ASN E 75 OD1 77.4 REMARK 620 3 ASP E 77 OD1 81.2 79.7 REMARK 620 4 THR E 79 O 83.8 157.6 85.4 REMARK 620 5 GLU E 84 OE1 95.5 89.5 169.2 104.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA E 203 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP E 109 OD1 REMARK 620 2 ASP E 111 OD1 84.8 REMARK 620 3 ASN E 113 OD1 85.6 71.2 REMARK 620 4 TYR E 115 O 95.4 157.9 86.8 REMARK 620 5 GLU E 120 OE1 111.1 126.5 155.4 74.0 REMARK 620 6 GLU E 120 OE2 98.2 81.3 151.8 120.4 46.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA E 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP E 157 OD1 REMARK 620 2 ASN E 159 OD1 94.7 REMARK 620 3 ASP E 161 OD1 87.5 68.6 REMARK 620 4 LYS E 163 O 83.8 146.8 78.2 REMARK 620 5 GLU E 168 OE1 110.3 121.0 157.6 90.0 REMARK 620 6 GLU E 168 OE2 86.0 88.3 155.4 124.5 44.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA E 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA E 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA E 203 DBREF 5M6C A 1 193 UNP P84074 HPCA_HUMAN 1 193 DBREF 5M6C E 1 193 UNP P84074 HPCA_HUMAN 1 193 SEQADV 5M6C ASN A 71 UNP P84074 THR 71 ENGINEERED MUTATION SEQADV 5M6C ASN E 71 UNP P84074 THR 71 ENGINEERED MUTATION SEQADV 5M6C THR E 190 UNP P84074 ALA 190 CONFLICT SEQRES 1 A 193 MET GLY LYS GLN ASN SER LYS LEU ARG PRO GLU MET LEU SEQRES 2 A 193 GLN ASP LEU ARG GLU ASN THR GLU PHE SER GLU LEU GLU SEQRES 3 A 193 LEU GLN GLU TRP TYR LYS GLY PHE LEU LYS ASP CYS PRO SEQRES 4 A 193 THR GLY ILE LEU ASN VAL ASP GLU PHE LYS LYS ILE TYR SEQRES 5 A 193 ALA ASN PHE PHE PRO TYR GLY ASP ALA SER LYS PHE ALA SEQRES 6 A 193 GLU HIS VAL PHE ARG ASN PHE ASP THR ASN SER ASP GLY SEQRES 7 A 193 THR ILE ASP PHE ARG GLU PHE ILE ILE ALA LEU SER VAL SEQRES 8 A 193 THR SER ARG GLY ARG LEU GLU GLN LYS LEU MET TRP ALA SEQRES 9 A 193 PHE SER MET TYR ASP LEU ASP GLY ASN GLY TYR ILE SER SEQRES 10 A 193 ARG GLU GLU MET LEU GLU ILE VAL GLN ALA ILE TYR LYS SEQRES 11 A 193 MET VAL SER SER VAL MET LYS MET PRO GLU ASP GLU SER SEQRES 12 A 193 THR PRO GLU LYS ARG THR GLU LYS ILE PHE ARG GLN MET SEQRES 13 A 193 ASP THR ASN ASN ASP GLY LYS LEU SER LEU GLU GLU PHE SEQRES 14 A 193 ILE ARG GLY ALA LYS SER ASP PRO SER ILE VAL ARG LEU SEQRES 15 A 193 LEU GLN CYS ASP PRO SER SER ALA SER GLN PHE SEQRES 1 E 193 MET GLY LYS GLN ASN SER LYS LEU ARG PRO GLU MET LEU SEQRES 2 E 193 GLN ASP LEU ARG GLU ASN THR GLU PHE SER GLU LEU GLU SEQRES 3 E 193 LEU GLN GLU TRP TYR LYS GLY PHE LEU LYS ASP CYS PRO SEQRES 4 E 193 THR GLY ILE LEU ASN VAL ASP GLU PHE LYS LYS ILE TYR SEQRES 5 E 193 ALA ASN PHE PHE PRO TYR GLY ASP ALA SER LYS PHE ALA SEQRES 6 E 193 GLU HIS VAL PHE ARG ASN PHE ASP THR ASN SER ASP GLY SEQRES 7 E 193 THR ILE ASP PHE ARG GLU PHE ILE ILE ALA LEU SER VAL SEQRES 8 E 193 THR SER ARG GLY ARG LEU GLU GLN LYS LEU MET TRP ALA SEQRES 9 E 193 PHE SER MET TYR ASP LEU ASP GLY ASN GLY TYR ILE SER SEQRES 10 E 193 ARG GLU GLU MET LEU GLU ILE VAL GLN ALA ILE TYR LYS SEQRES 11 E 193 MET VAL SER SER VAL MET LYS MET PRO GLU ASP GLU SER SEQRES 12 E 193 THR PRO GLU LYS ARG THR GLU LYS ILE PHE ARG GLN MET SEQRES 13 E 193 ASP THR ASN ASN ASP GLY LYS LEU SER LEU GLU GLU PHE SEQRES 14 E 193 ILE ARG GLY ALA LYS SER ASP PRO SER ILE VAL ARG LEU SEQRES 15 E 193 LEU GLN CYS ASP PRO SER SER THR SER GLN PHE HET CA A 201 1 HET CA A 202 1 HET CA A 203 1 HET CA E 201 1 HET CA E 202 1 HET CA E 203 1 HETNAM CA CALCIUM ION FORMUL 3 CA 6(CA 2+) FORMUL 9 HOH *13(H2 O) HELIX 1 AA1 ARG A 9 THR A 20 1 12 HELIX 2 AA2 SER A 23 CYS A 38 1 16 HELIX 3 AA3 ASN A 44 ALA A 53 1 10 HELIX 4 AA4 PRO A 57 ASP A 73 1 17 HELIX 5 AA5 ASP A 81 GLY A 95 1 15 HELIX 6 AA6 ARG A 96 ASP A 109 1 14 HELIX 7 AA7 ARG A 118 SER A 133 1 16 HELIX 8 AA8 THR A 144 GLN A 155 1 12 HELIX 9 AA9 SER A 165 LYS A 174 1 10 HELIX 10 AB1 ASP A 176 GLN A 184 1 9 HELIX 11 AB2 ARG E 9 THR E 20 1 12 HELIX 12 AB3 SER E 23 CYS E 38 1 16 HELIX 13 AB4 ASN E 44 ALA E 53 1 10 HELIX 14 AB5 PRO E 57 ASP E 73 1 17 HELIX 15 AB6 ASP E 81 GLY E 95 1 15 HELIX 16 AB7 ARG E 96 ASP E 109 1 14 HELIX 17 AB8 ARG E 118 SER E 133 1 16 HELIX 18 AB9 PRO E 139 SER E 143 5 5 HELIX 19 AC1 THR E 144 ASP E 157 1 14 HELIX 20 AC2 SER E 165 LYS E 174 1 10 HELIX 21 AC3 ASP E 176 GLN E 184 1 9 SHEET 1 AA1 2 ILE A 116 SER A 117 0 SHEET 2 AA1 2 LYS A 163 LEU A 164 -1 O LEU A 164 N ILE A 116 SHEET 1 AA2 2 ILE E 116 SER E 117 0 SHEET 2 AA2 2 LYS E 163 LEU E 164 -1 O LEU E 164 N ILE E 116 LINK OD1 ASP A 73 CA CA A 201 1555 1555 2.43 LINK OD1 ASN A 75 CA CA A 201 1555 1555 2.45 LINK OD1 ASP A 77 CA CA A 201 1555 1555 2.32 LINK O THR A 79 CA CA A 201 1555 1555 2.34 LINK OE1 GLU A 84 CA CA A 201 1555 1555 2.23 LINK OD1 ASP A 109 CA CA A 203 1555 1555 2.43 LINK OD1 ASP A 111 CA CA A 203 1555 1555 2.55 LINK OD1 ASN A 113 CA CA A 203 1555 1555 2.44 LINK O TYR A 115 CA CA A 203 1555 1555 2.29 LINK OE1 GLU A 120 CA CA A 203 1555 1555 2.75 LINK OE2 GLU A 120 CA CA A 203 1555 1555 2.93 LINK OD1 ASP A 157 CA CA A 202 1555 1555 2.41 LINK OD1 ASN A 159 CA CA A 202 1555 1555 2.87 LINK OD1 ASP A 161 CA CA A 202 1555 1555 2.60 LINK O LYS A 163 CA CA A 202 1555 1555 2.42 LINK OE1 GLU A 168 CA CA A 202 1555 1555 2.83 LINK OE2 GLU A 168 CA CA A 202 1555 1555 2.75 LINK CA CA A 201 O HOH E 305 1555 6665 2.38 LINK OD1 ASP E 73 CA CA E 201 1555 1555 2.38 LINK OD1 ASN E 75 CA CA E 201 1555 1555 2.37 LINK OD1 ASP E 77 CA CA E 201 1555 1555 2.37 LINK O THR E 79 CA CA E 201 1555 1555 2.29 LINK OE1 GLU E 84 CA CA E 201 1555 1555 2.29 LINK OD1 ASP E 109 CA CA E 203 1555 1555 2.34 LINK OD1 ASP E 111 CA CA E 203 1555 1555 2.73 LINK OD1 ASN E 113 CA CA E 203 1555 1555 2.32 LINK O TYR E 115 CA CA E 203 1555 1555 2.37 LINK OE1 GLU E 120 CA CA E 203 1555 1555 2.67 LINK OE2 GLU E 120 CA CA E 203 1555 1555 2.81 LINK OD1 ASP E 157 CA CA E 202 1555 1555 2.40 LINK OD1 ASN E 159 CA CA E 202 1555 1555 2.86 LINK OD1 ASP E 161 CA CA E 202 1555 1555 2.40 LINK O LYS E 163 CA CA E 202 1555 1555 2.38 LINK OE1 GLU E 168 CA CA E 202 1555 1555 2.70 LINK OE2 GLU E 168 CA CA E 202 1555 1555 3.08 SITE 1 AC1 6 ASP A 73 ASN A 75 ASP A 77 THR A 79 SITE 2 AC1 6 GLU A 84 HOH E 305 SITE 1 AC2 5 ASP A 157 ASN A 159 ASP A 161 LYS A 163 SITE 2 AC2 5 GLU A 168 SITE 1 AC3 5 ASP A 109 ASP A 111 ASN A 113 TYR A 115 SITE 2 AC3 5 GLU A 120 SITE 1 AC4 5 ASP E 73 ASN E 75 ASP E 77 THR E 79 SITE 2 AC4 5 GLU E 84 SITE 1 AC5 5 ASP E 157 ASN E 159 ASP E 161 LYS E 163 SITE 2 AC5 5 GLU E 168 SITE 1 AC6 5 ASP E 109 ASP E 111 ASN E 113 TYR E 115 SITE 2 AC6 5 GLU E 120 CRYST1 51.160 51.160 284.061 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019547 0.011285 0.000000 0.00000 SCALE2 0.000000 0.022570 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003520 0.00000