HEADER PHOTOSYNTHESIS 28-OCT-16 5M7L TITLE BLASTOCHLORIS VIRIDIS PHOTOSYNTHETIC REACTION CENTER SYNCHROTRON TITLE 2 STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOTOSYNTHETIC REACTION CENTER CYTOCHROME C SUBUNIT; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CYTOCHROME C558/C559; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: REACTION CENTER PROTEIN L CHAIN; COMPND 7 CHAIN: B; COMPND 8 SYNONYM: PHOTOSYNTHETIC REACTION CENTER L SUBUNIT; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: REACTION CENTER PROTEIN M CHAIN; COMPND 11 CHAIN: C; COMPND 12 SYNONYM: PHOTOSYNTHETIC REACTION CENTER M SUBUNIT; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: REACTION CENTER PROTEIN H CHAIN; COMPND 15 CHAIN: D; COMPND 16 SYNONYM: PHOTOSYNTHETIC REACTION CENTER H SUBUNIT SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BLASTOCHLORIS VIRIDIS; SOURCE 3 ORGANISM_TAXID: 1079; SOURCE 4 MOL_ID: 2; SOURCE 5 ORGANISM_SCIENTIFIC: BLASTOCHLORIS VIRIDIS; SOURCE 6 ORGANISM_TAXID: 1079; SOURCE 7 MOL_ID: 3; SOURCE 8 ORGANISM_SCIENTIFIC: BLASTOCHLORIS VIRIDIS; SOURCE 9 ORGANISM_TAXID: 1079; SOURCE 10 MOL_ID: 4; SOURCE 11 ORGANISM_SCIENTIFIC: BLASTOCHLORIS VIRIDIS; SOURCE 12 ORGANISM_TAXID: 1079 KEYWDS PHOTOSYNTHETIC, REACTION CENTER, PHOTOSYNTHESIS EXPDTA X-RAY DIFFRACTION AUTHOR A.S.SHARMA,L.JOHANSSON,E.DUNEVALL,W.Y.WAHLGREN,R.NEUTZE,G.KATONA REVDAT 5 23-OCT-24 5M7L 1 REMARK REVDAT 4 17-JAN-24 5M7L 1 REMARK REVDAT 3 16-OCT-19 5M7L 1 REMARK REVDAT 2 08-MAR-17 5M7L 1 JRNL REVDAT 1 08-FEB-17 5M7L 0 JRNL AUTH A.SHARMA,L.JOHANSSON,E.DUNEVALL,W.Y.WAHLGREN,R.NEUTZE, JRNL AUTH 2 G.KATONA JRNL TITL ASYMMETRY IN SERIAL FEMTOSECOND CRYSTALLOGRAPHY DATA. JRNL REF ACTA CRYSTALLOGR A FOUND ADV V. 73 93 2017 JRNL REFN ESSN 2053-2733 JRNL PMID 28248658 JRNL DOI 10.1107/S2053273316018696 REMARK 2 REMARK 2 RESOLUTION. 3.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.50 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 22020 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.244 REMARK 3 R VALUE (WORKING SET) : 0.242 REMARK 3 FREE R VALUE : 0.280 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 1095 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 50.5072 - 7.1939 0.98 2770 140 0.1974 0.2117 REMARK 3 2 7.1939 - 5.7126 1.00 2681 140 0.2351 0.2904 REMARK 3 3 5.7126 - 4.9912 1.00 2641 141 0.2312 0.3094 REMARK 3 4 4.9912 - 4.5352 1.00 2596 133 0.2278 0.2278 REMARK 3 5 4.5352 - 4.2103 1.00 2591 124 0.2388 0.2940 REMARK 3 6 4.2103 - 3.9622 1.00 2597 133 0.2710 0.3121 REMARK 3 7 3.9622 - 3.7638 0.99 2531 154 0.2994 0.3511 REMARK 3 8 3.7638 - 3.6000 0.99 2518 130 0.3170 0.3191 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.440 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.930 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 10255 REMARK 3 ANGLE : 1.184 14102 REMARK 3 CHIRALITY : 0.041 1430 REMARK 3 PLANARITY : 0.005 1773 REMARK 3 DIHEDRAL : 15.813 3505 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 1.6799 -19.6761 -53.1456 REMARK 3 T TENSOR REMARK 3 T11: 0.3118 T22: 0.4166 REMARK 3 T33: 0.3911 T12: 0.0156 REMARK 3 T13: 0.0062 T23: 0.0291 REMARK 3 L TENSOR REMARK 3 L11: 0.5190 L22: 0.7037 REMARK 3 L33: 0.9029 L12: 0.1311 REMARK 3 L13: -0.1835 L23: 0.0900 REMARK 3 S TENSOR REMARK 3 S11: 0.0350 S12: -0.3435 S13: -0.0112 REMARK 3 S21: 0.2166 S22: -0.0285 S23: 0.0125 REMARK 3 S31: 0.0485 S32: 0.1926 S33: -0.0010 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5M7L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-OCT-16. REMARK 100 THE DEPOSITION ID IS D_1200002067. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-SEP-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8726 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22398 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.580 REMARK 200 RESOLUTION RANGE LOW (A) : 50.502 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 4.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 4CAS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MELTED MONOOLEIN WAS THOROUGHLY MIXED REMARK 280 IN A RATIO OF 3:2 (V/V) WITH 0.1M HEPES, PH 7.5, 0.1 % LDAO REMARK 280 UNTIL A VISCOUS, TRANSPARENT LCP WAS OBTAINED. THE FORMED PHASE REMARK 280 WAS THEN TRANSFERRED INTO A GLASS VIAL AND SPONGE-PHASE-INDUCING REMARK 280 SOLUTION (1:4 RATIO) WAS ADDED CONTAINING 16% JEFFAMINE M-600, REMARK 280 1M HEPES PH 7.9, 0.7 M AMMONIUM SULPHATE, 2.5% 1,2,3- REMARK 280 HEPTANETRIOL, WHICH SWELL THE CUBIC PHASE TO SPONGE PHASE. AFTER REMARK 280 PHASE SEPARATION OVERNIGHT, THE UPPER PHASE (SPONGE PHASE) WAS REMARK 280 HARVESTED. CRYSTALS WERE GROWN USING BATCH CRYSTALLIZATION IN REMARK 280 THE LIPIDIC-SPONGE PHASE. EQUAL AMOUNT OF SPONGE PHASE AND REMARK 280 PROTEIN WERE MIXED WITH 2/5 (V/V) OF 1.2 M TRIS-SODIUM CITRATE REMARK 280 AND ALLOWED TO INCUBATE FOR SEVERAL WEEKS., BATCH MODE, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.80000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 191.05000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.45000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 191.05000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.80000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.45000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 50250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -372.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 LYS A -18 REMARK 465 GLN A -17 REMARK 465 LEU A -16 REMARK 465 ILE A -15 REMARK 465 VAL A -14 REMARK 465 ASN A -13 REMARK 465 SER A -12 REMARK 465 VAL A -11 REMARK 465 ALA A -10 REMARK 465 THR A -9 REMARK 465 VAL A -8 REMARK 465 ALA A -7 REMARK 465 LEU A -6 REMARK 465 ALA A -5 REMARK 465 SER A -4 REMARK 465 LEU A -3 REMARK 465 VAL A -2 REMARK 465 ALA A -1 REMARK 465 GLY A 0 REMARK 465 ALA A 333 REMARK 465 ALA A 334 REMARK 465 ALA A 335 REMARK 465 LYS A 336 REMARK 465 MET B 0 REMARK 465 MET C 0 REMARK 465 PRO D 46 REMARK 465 LEU D 47 REMARK 465 GLY D 48 REMARK 465 LEU D 49 REMARK 465 VAL D 50 REMARK 465 LYS D 51 REMARK 465 LEU D 52 REMARK 465 ALA D 53 REMARK 465 PRO D 54 REMARK 465 GLU D 55 REMARK 465 ASP D 56 REMARK 465 GLY D 57 REMARK 465 GLN D 58 REMARK 465 VAL D 59 REMARK 465 TYR D 60 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 332 CG CD CE NZ REMARK 470 TYR B 51 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP B 202 CG OD1 OD2 REMARK 470 LYS C 31 CG CD CE NZ REMARK 470 LYS C 323 CG CD CE NZ REMARK 470 ARG D 33 CG CD NE CZ NH1 NH2 REMARK 470 LEU D 43 CG CD1 CD2 REMARK 470 GLU D 45 CG CD OE1 OE2 REMARK 470 ARG D 80 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 81 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 82 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 84 CG CD OE1 OE2 REMARK 470 THR D 85 OG1 CG2 REMARK 470 ARG D 86 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 87 CG CD OE1 OE2 REMARK 470 LYS D 89 CG CD CE NZ REMARK 470 GLU D 97 CG CD OE1 OE2 REMARK 470 GLU D 119 CG CD OE1 OE2 REMARK 470 LYS D 131 CG CD CE NZ REMARK 470 ILE D 145 CG1 CG2 CD1 REMARK 470 GLU D 147 CG CD OE1 OE2 REMARK 470 ASP D 149 CG OD1 OD2 REMARK 470 VAL D 163 CG1 CG2 REMARK 470 THR D 167 OG1 CG2 REMARK 470 ARG D 175 CG CD NE CZ NH1 NH2 REMARK 470 SER D 190 OG REMARK 470 LEU D 195 CG CD1 CD2 REMARK 470 LYS D 205 CG CD CE NZ REMARK 470 LYS D 207 CG CD CE NZ REMARK 470 GLU D 216 CG CD OE1 OE2 REMARK 470 ARG D 223 CG CD NE CZ NH1 NH2 REMARK 470 GLN D 225 CG CD OE1 NE2 REMARK 470 ARG D 227 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 234 CG CD OE1 OE2 REMARK 470 GLU D 235 CG CD OE1 OE2 REMARK 470 LYS D 237 CG CD CE NZ REMARK 470 GLU D 252 CG CD OE1 OE2 REMARK 470 LEU D 258 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLN D 217 OH TYR D 241 2.06 REMARK 500 NE2 GLN B 214 O VAL C 19 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO D 79 C - N - CA ANGL. DEV. = 17.7 DEGREES REMARK 500 PRO D 79 C - N - CD ANGL. DEV. = -16.9 DEGREES REMARK 500 PRO D 83 C - N - CA ANGL. DEV. = 13.7 DEGREES REMARK 500 ASP D 142 CB - CG - OD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 LEU D 185 CB - CG - CD2 ANGL. DEV. = 10.7 DEGREES REMARK 500 ARG D 192 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 38 106.89 -46.22 REMARK 500 LEU A 62 38.97 -91.12 REMARK 500 VAL A 81 -63.03 -104.67 REMARK 500 HIS A 124 -61.48 -122.10 REMARK 500 ALA A 126 -129.31 47.80 REMARK 500 LEU A 148 26.16 -79.92 REMARK 500 ASN A 186 48.54 -88.10 REMARK 500 ALA A 250 3.44 -68.95 REMARK 500 THR A 252 86.13 -159.82 REMARK 500 TRP A 256 -150.42 -102.81 REMARK 500 TYR A 281 -52.15 -132.40 REMARK 500 PRO A 284 5.05 -68.49 REMARK 500 ASP A 304 -161.00 -117.06 REMARK 500 ARG B 10 60.95 -69.19 REMARK 500 VAL B 31 -83.36 -101.94 REMARK 500 THR B 58 163.95 -46.64 REMARK 500 TRP B 59 -28.43 169.07 REMARK 500 VAL B 133 -60.66 -125.15 REMARK 500 LEU B 165 -79.22 63.27 REMARK 500 ASP B 202 -119.40 55.93 REMARK 500 ASP B 204 151.24 19.51 REMARK 500 HIS C 16 128.05 -38.32 REMARK 500 LEU C 51 -98.24 -82.18 REMARK 500 CYS C 160 -30.74 -153.36 REMARK 500 ASN C 193 101.83 64.07 REMARK 500 ASP C 238 98.60 -171.18 REMARK 500 TYR C 308 -72.48 -103.65 REMARK 500 PRO C 310 154.53 -49.61 REMARK 500 LEU D 6 -165.08 -127.00 REMARK 500 GLN D 8 -138.82 49.49 REMARK 500 TYR D 31 -68.28 -148.42 REMARK 500 TYR D 64 166.10 -49.39 REMARK 500 PRO D 79 -175.33 -54.90 REMARK 500 GLU D 84 152.01 162.50 REMARK 500 GLU D 97 -44.16 -13.27 REMARK 500 ALA D 111 72.12 49.84 REMARK 500 PRO D 114 1.68 -69.99 REMARK 500 ALA D 121 130.76 -21.66 REMARK 500 ALA D 126 -163.44 -112.60 REMARK 500 ALA D 140 54.89 -68.48 REMARK 500 THR D 141 -75.56 40.04 REMARK 500 ARG D 153 109.82 -38.52 REMARK 500 SER D 190 14.67 -158.25 REMARK 500 THR D 193 145.77 174.68 REMARK 500 ILE D 230 130.35 -172.54 REMARK 500 GLU D 255 -179.80 -64.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 THR B 58 TRP B 59 127.77 REMARK 500 ASP D 125 ALA D 126 -145.28 REMARK 500 ALA D 140 THR D 141 135.58 REMARK 500 GLU D 184 LEU D 185 -147.51 REMARK 500 ARG D 192 THR D 193 114.55 REMARK 500 GLN D 229 ILE D 230 145.50 REMARK 500 GLU D 255 SER D 256 146.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 DGA A 405 REMARK 610 BCL B 301 REMARK 610 BPB C 402 REMARK 610 OTP C 406 REMARK 610 MPG C 407 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 401 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 91 NE2 REMARK 620 2 HEC A 401 NA 71.5 REMARK 620 3 HEC A 401 NB 84.5 93.7 REMARK 620 4 HEC A 401 NC 93.5 164.9 85.0 REMARK 620 5 HEC A 401 ND 78.2 87.8 161.2 88.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 404 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 124 NE2 REMARK 620 2 HEC A 404 NA 99.1 REMARK 620 3 HEC A 404 NB 87.9 91.5 REMARK 620 4 HEC A 404 NC 85.0 175.9 88.7 REMARK 620 5 HEC A 404 ND 97.2 91.0 173.9 88.4 REMARK 620 6 HIS A 309 NE2 162.3 91.3 77.4 84.8 97.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 402 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 136 NE2 REMARK 620 2 HEC A 402 NA 92.5 REMARK 620 3 HEC A 402 NB 68.4 89.4 REMARK 620 4 HEC A 402 NC 79.5 172.0 88.5 REMARK 620 5 HEC A 402 ND 100.8 90.7 169.2 90.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 403 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 248 NE2 REMARK 620 2 HEC A 403 NA 83.6 REMARK 620 3 HEC A 403 NB 87.6 92.9 REMARK 620 4 HEC A 403 NC 85.2 168.9 86.6 REMARK 620 5 HEC A 403 ND 78.3 88.3 165.6 89.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 C 403 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 190 NE2 REMARK 620 2 HIS B 230 NE2 78.6 REMARK 620 3 HIS C 217 NE2 131.9 101.4 REMARK 620 4 GLU C 232 OE1 90.5 78.1 137.1 REMARK 620 5 GLU C 232 OE2 138.3 79.8 87.3 50.1 REMARK 620 6 HIS C 264 NE2 100.3 158.3 95.4 80.2 87.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEC A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEC A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEC A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEC A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DGA A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BCL B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BCL B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BCL B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BPB B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPG B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPG B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BCL C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BPB C 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE2 C 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MQ7 C 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NS5 C 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OTP C 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPG C 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 C 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 C 409 DBREF 5M7L A -19 336 UNP P07173 CYCR_BLAVI 1 356 DBREF 5M7L B 0 273 UNP P06009 RCEL_BLAVI 1 274 DBREF 5M7L C 0 323 UNP P06010 RCEM_BLAVI 1 324 DBREF 5M7L D 2 258 UNP P06008 RCEH_BLAVI 2 258 SEQRES 1 A 356 MET LYS GLN LEU ILE VAL ASN SER VAL ALA THR VAL ALA SEQRES 2 A 356 LEU ALA SER LEU VAL ALA GLY CYS PHE GLU PRO PRO PRO SEQRES 3 A 356 ALA THR THR THR GLN THR GLY PHE ARG GLY LEU SER MET SEQRES 4 A 356 GLY GLU VAL LEU HIS PRO ALA THR VAL LYS ALA LYS LYS SEQRES 5 A 356 GLU ARG ASP ALA GLN TYR PRO PRO ALA LEU ALA ALA VAL SEQRES 6 A 356 LYS ALA GLU GLY PRO PRO VAL SER GLN VAL TYR LYS ASN SEQRES 7 A 356 VAL LYS VAL LEU GLY ASN LEU THR GLU ALA GLU PHE LEU SEQRES 8 A 356 ARG THR MET THR ALA ILE THR GLU TRP VAL SER PRO GLN SEQRES 9 A 356 GLU GLY CYS THR TYR CYS HIS ASP GLU ASN ASN LEU ALA SEQRES 10 A 356 SER GLU ALA LYS TYR PRO TYR VAL VAL ALA ARG ARG MET SEQRES 11 A 356 LEU GLU MET THR ARG ALA ILE ASN THR ASN TRP THR GLN SEQRES 12 A 356 HIS VAL ALA GLN THR GLY VAL THR CYS TYR THR CYS HIS SEQRES 13 A 356 ARG GLY THR PRO LEU PRO PRO TYR VAL ARG TYR LEU GLU SEQRES 14 A 356 PRO THR LEU PRO LEU ASN ASN ARG GLU THR PRO THR HIS SEQRES 15 A 356 VAL GLU ARG VAL GLU THR ARG SER GLY TYR VAL VAL ARG SEQRES 16 A 356 LEU ALA LYS TYR THR ALA TYR SER ALA LEU ASN TYR ASP SEQRES 17 A 356 PRO PHE THR MET PHE LEU ALA ASN ASP LYS ARG GLN VAL SEQRES 18 A 356 ARG VAL VAL PRO GLN THR ALA LEU PRO LEU VAL GLY VAL SEQRES 19 A 356 SER ARG GLY LYS GLU ARG ARG PRO LEU SER ASP ALA TYR SEQRES 20 A 356 ALA THR PHE ALA LEU MET MET SER ILE SER ASP SER LEU SEQRES 21 A 356 GLY THR ASN CYS THR PHE CYS HIS ASN ALA GLN THR PHE SEQRES 22 A 356 GLU SER TRP GLY LYS LYS SER THR PRO GLN ARG ALA ILE SEQRES 23 A 356 ALA TRP TRP GLY ILE ARG MET VAL ARG ASP LEU ASN MET SEQRES 24 A 356 ASN TYR LEU ALA PRO LEU ASN ALA SER LEU PRO ALA SER SEQRES 25 A 356 ARG LEU GLY ARG GLN GLY GLU ALA PRO GLN ALA ASP CYS SEQRES 26 A 356 ARG THR CYS HIS GLN GLY VAL THR LYS PRO LEU PHE GLY SEQRES 27 A 356 ALA SER ARG LEU LYS ASP TYR PRO GLU LEU GLY PRO ILE SEQRES 28 A 356 LYS ALA ALA ALA LYS SEQRES 1 B 274 MET ALA LEU LEU SER PHE GLU ARG LYS TYR ARG VAL ARG SEQRES 2 B 274 GLY GLY THR LEU ILE GLY GLY ASP LEU PHE ASP PHE TRP SEQRES 3 B 274 VAL GLY PRO TYR PHE VAL GLY PHE PHE GLY VAL SER ALA SEQRES 4 B 274 ILE PHE PHE ILE PHE LEU GLY VAL SER LEU ILE GLY TYR SEQRES 5 B 274 ALA ALA SER GLN GLY PRO THR TRP ASP PRO PHE ALA ILE SEQRES 6 B 274 SER ILE ASN PRO PRO ASP LEU LYS TYR GLY LEU GLY ALA SEQRES 7 B 274 ALA PRO LEU LEU GLU GLY GLY PHE TRP GLN ALA ILE THR SEQRES 8 B 274 VAL CYS ALA LEU GLY ALA PHE ILE SER TRP MET LEU ARG SEQRES 9 B 274 GLU VAL GLU ILE SER ARG LYS LEU GLY ILE GLY TRP HIS SEQRES 10 B 274 VAL PRO LEU ALA PHE CYS VAL PRO ILE PHE MET PHE CYS SEQRES 11 B 274 VAL LEU GLN VAL PHE ARG PRO LEU LEU LEU GLY SER TRP SEQRES 12 B 274 GLY HIS ALA PHE PRO TYR GLY ILE LEU SER HIS LEU ASP SEQRES 13 B 274 TRP VAL ASN ASN PHE GLY TYR GLN TYR LEU ASN TRP HIS SEQRES 14 B 274 TYR ASN PRO GLY HIS MET SER SER VAL SER PHE LEU PHE SEQRES 15 B 274 VAL ASN ALA MET ALA LEU GLY LEU HIS GLY GLY LEU ILE SEQRES 16 B 274 LEU SER VAL ALA ASN PRO GLY ASP GLY ASP LYS VAL LYS SEQRES 17 B 274 THR ALA GLU HIS GLU ASN GLN TYR PHE ARG ASP VAL VAL SEQRES 18 B 274 GLY TYR SER ILE GLY ALA LEU SER ILE HIS ARG LEU GLY SEQRES 19 B 274 LEU PHE LEU ALA SER ASN ILE PHE LEU THR GLY ALA PHE SEQRES 20 B 274 GLY THR ILE ALA SER GLY PRO PHE TRP THR ARG GLY TRP SEQRES 21 B 274 PRO GLU TRP TRP GLY TRP TRP LEU ASP ILE PRO PHE TRP SEQRES 22 B 274 SER SEQRES 1 C 324 MET ALA ASP TYR GLN THR ILE TYR THR GLN ILE GLN ALA SEQRES 2 C 324 ARG GLY PRO HIS ILE THR VAL SER GLY GLU TRP GLY ASP SEQRES 3 C 324 ASN ASP ARG VAL GLY LYS PRO PHE TYR SER TYR TRP LEU SEQRES 4 C 324 GLY LYS ILE GLY ASP ALA GLN ILE GLY PRO ILE TYR LEU SEQRES 5 C 324 GLY ALA SER GLY ILE ALA ALA PHE ALA PHE GLY SER THR SEQRES 6 C 324 ALA ILE LEU ILE ILE LEU PHE ASN MET ALA ALA GLU VAL SEQRES 7 C 324 HIS PHE ASP PRO LEU GLN PHE PHE ARG GLN PHE PHE TRP SEQRES 8 C 324 LEU GLY LEU TYR PRO PRO LYS ALA GLN TYR GLY MET GLY SEQRES 9 C 324 ILE PRO PRO LEU HIS ASP GLY GLY TRP TRP LEU MET ALA SEQRES 10 C 324 GLY LEU PHE MET THR LEU SER LEU GLY SER TRP TRP ILE SEQRES 11 C 324 ARG VAL TYR SER ARG ALA ARG ALA LEU GLY LEU GLY THR SEQRES 12 C 324 HIS ILE ALA TRP ASN PHE ALA ALA ALA ILE PHE PHE VAL SEQRES 13 C 324 LEU CYS ILE GLY CYS ILE HIS PRO THR LEU VAL GLY SER SEQRES 14 C 324 TRP SER GLU GLY VAL PRO PHE GLY ILE TRP PRO HIS ILE SEQRES 15 C 324 ASP TRP LEU THR ALA PHE SER ILE ARG TYR GLY ASN PHE SEQRES 16 C 324 TYR TYR CYS PRO TRP HIS GLY PHE SER ILE GLY PHE ALA SEQRES 17 C 324 TYR GLY CYS GLY LEU LEU PHE ALA ALA HIS GLY ALA THR SEQRES 18 C 324 ILE LEU ALA VAL ALA ARG PHE GLY GLY ASP ARG GLU ILE SEQRES 19 C 324 GLU GLN ILE THR ASP ARG GLY THR ALA VAL GLU ARG ALA SEQRES 20 C 324 ALA LEU PHE TRP ARG TRP THR ILE GLY PHE ASN ALA THR SEQRES 21 C 324 ILE GLU SER VAL HIS ARG TRP GLY TRP PHE PHE SER LEU SEQRES 22 C 324 MET VAL MET VAL SER ALA SER VAL GLY ILE LEU LEU THR SEQRES 23 C 324 GLY THR PHE VAL ASP ASN TRP TYR LEU TRP CYS VAL LYS SEQRES 24 C 324 HIS GLY ALA ALA PRO ASP TYR PRO ALA TYR LEU PRO ALA SEQRES 25 C 324 THR PRO ASP PRO ALA SER LEU PRO GLY ALA PRO LYS SEQRES 1 D 258 FME TYR HIS GLY ALA LEU ALA GLN HIS LEU ASP ILE ALA SEQRES 2 D 258 GLN LEU VAL TRP TYR ALA GLN TRP LEU VAL ILE TRP THR SEQRES 3 D 258 VAL VAL LEU LEU TYR LEU ARG ARG GLU ASP ARG ARG GLU SEQRES 4 D 258 GLY TYR PRO LEU VAL GLU PRO LEU GLY LEU VAL LYS LEU SEQRES 5 D 258 ALA PRO GLU ASP GLY GLN VAL TYR GLU LEU PRO TYR PRO SEQRES 6 D 258 LYS THR PHE VAL LEU PRO HIS GLY GLY THR VAL THR VAL SEQRES 7 D 258 PRO ARG ARG ARG PRO GLU THR ARG GLU LEU LYS LEU ALA SEQRES 8 D 258 GLN THR ASP GLY PHE GLU GLY ALA PRO LEU GLN PRO THR SEQRES 9 D 258 GLY ASN PRO LEU VAL ASP ALA VAL GLY PRO ALA SER TYR SEQRES 10 D 258 ALA GLU ARG ALA GLU VAL VAL ASP ALA THR VAL ASP GLY SEQRES 11 D 258 LYS ALA LYS ILE VAL PRO LEU ARG VAL ALA THR ASP PHE SEQRES 12 D 258 SER ILE ALA GLU GLY ASP VAL ASP PRO ARG GLY LEU PRO SEQRES 13 D 258 VAL VAL ALA ALA ASP GLY VAL GLU ALA GLY THR VAL THR SEQRES 14 D 258 ASP LEU TRP VAL ASP ARG SER GLU HIS TYR PHE ARG TYR SEQRES 15 D 258 LEU GLU LEU SER VAL ALA GLY SER ALA ARG THR ALA LEU SEQRES 16 D 258 ILE PRO LEU GLY PHE CYS ASP VAL LYS LYS ASP LYS ILE SEQRES 17 D 258 VAL VAL THR SER ILE LEU SER GLU GLN PHE ALA ASN VAL SEQRES 18 D 258 PRO ARG LEU GLN SER ARG ASP GLN ILE THR LEU ARG GLU SEQRES 19 D 258 GLU ASP LYS VAL SER ALA TYR TYR ALA GLY GLY LEU LEU SEQRES 20 D 258 TYR ALA THR PRO GLU ARG ALA GLU SER LEU LEU MODRES 5M7L FME D 1 MODIFIED RESIDUE HET FME D 1 10 HET HEC A 401 43 HET HEC A 402 43 HET HEC A 403 43 HET HEC A 404 43 HET DGA A 405 37 HET BCL B 301 65 HET BCL B 302 66 HET BCL B 303 66 HET BPB B 304 65 HET MPG B 305 25 HET MPG B 306 25 HET BCL C 401 66 HET BPB C 402 61 HET FE2 C 403 1 HET MQ7 C 404 48 HET NS5 C 405 40 HET OTP C 406 41 HET MPG C 407 17 HET PO4 C 408 5 HET PO4 C 409 5 HETNAM FME N-FORMYLMETHIONINE HETNAM HEC HEME C HETNAM DGA DIACYL GLYCEROL HETNAM BCL BACTERIOCHLOROPHYLL A HETNAM BPB BACTERIOPHEOPHYTIN B HETNAM MPG [(Z)-OCTADEC-9-ENYL] (2R)-2,3-BIS(OXIDANYL)PROPANOATE HETNAM FE2 FE (II) ION HETNAM MQ7 MENAQUINONE-7 HETNAM NS5 15-CIS-1,2-DIHYDRONEUROSPORENE HETNAM OTP (2E,6E,10E,14E,18E,22E,26E)-3,7,11,15,19,23,27,31- HETNAM 2 OTP OCTAMETHYLDOTRIACONTA-2,6,10,14,18,22,26,30-OCTAENYL HETNAM 3 OTP TRIHYDROGEN DIPHOSPHATE HETNAM PO4 PHOSPHATE ION HETSYN OTP OCTAPRENYL PYROPHOSPHATE FORMUL 4 FME C6 H11 N O3 S FORMUL 5 HEC 4(C34 H34 FE N4 O4) FORMUL 9 DGA C39 H76 O5 FORMUL 10 BCL 4(C55 H74 MG N4 O6) FORMUL 13 BPB 2(C55 H74 N4 O6) FORMUL 14 MPG 3(C21 H40 O4) FORMUL 18 FE2 FE 2+ FORMUL 19 MQ7 C46 H64 O2 FORMUL 20 NS5 C40 H60 FORMUL 21 OTP C40 H68 O7 P2 FORMUL 23 PO4 2(O4 P 3-) HELIX 1 AA1 HIS A 24 ALA A 36 1 13 HELIX 2 AA2 PRO A 51 TYR A 56 1 6 HELIX 3 AA3 THR A 66 VAL A 81 1 16 HELIX 4 AA4 GLY A 86 CYS A 90 5 5 HELIX 5 AA5 LYS A 101 TRP A 121 1 21 HELIX 6 AA6 CYS A 132 ARG A 137 1 6 HELIX 7 AA7 THR A 168 SER A 170 5 3 HELIX 8 AA8 GLY A 171 TYR A 179 1 9 HELIX 9 AA9 ASP A 188 LEU A 194 1 7 HELIX 10 AB1 ARG A 216 ARG A 220 5 5 HELIX 11 AB2 LEU A 223 GLY A 241 1 19 HELIX 12 AB3 ASN A 243 CYS A 247 5 5 HELIX 13 AB4 TRP A 256 SER A 260 5 5 HELIX 14 AB5 THR A 261 TYR A 281 1 21 HELIX 15 AB6 LEU A 282 SER A 288 5 7 HELIX 16 AB7 PRO A 290 LEU A 294 5 5 HELIX 17 AB8 CYS A 305 GLN A 310 1 6 HELIX 18 AB9 LYS A 314 ALA A 319 5 6 HELIX 19 AC1 TYR A 325 GLY A 329 5 5 HELIX 20 AC2 VAL B 31 GLY B 56 1 26 HELIX 21 AC3 ASP B 60 ALA B 63 5 4 HELIX 22 AC4 ASP B 70 GLY B 74 5 5 HELIX 23 AC5 PRO B 79 GLU B 82 5 4 HELIX 24 AC6 GLY B 83 GLY B 112 1 30 HELIX 25 AC7 TRP B 115 PHE B 121 1 7 HELIX 26 AC8 PHE B 121 VAL B 133 1 13 HELIX 27 AC9 VAL B 133 GLY B 140 1 8 HELIX 28 AD1 SER B 141 ALA B 145 5 5 HELIX 29 AD2 LEU B 151 GLN B 163 1 13 HELIX 30 AD3 TYR B 164 LEU B 165 5 2 HELIX 31 AD4 ASN B 166 TYR B 169 5 4 HELIX 32 AD5 ASN B 170 ASN B 199 1 30 HELIX 33 AD6 THR B 208 VAL B 220 1 13 HELIX 34 AD7 LEU B 227 SER B 251 1 25 HELIX 35 AD8 GLY B 258 TRP B 263 1 6 HELIX 36 AD9 TRP B 263 ASP B 268 1 6 HELIX 37 AE1 TRP C 37 ILE C 41 5 5 HELIX 38 AE2 LEU C 51 GLU C 76 1 26 HELIX 39 AE3 ASP C 80 PHE C 88 1 9 HELIX 40 AE4 GLY C 110 LEU C 138 1 29 HELIX 41 AE5 THR C 142 CYS C 160 1 19 HELIX 42 AE6 CYS C 160 GLY C 167 1 8 HELIX 43 AE7 SER C 168 GLY C 172 5 5 HELIX 44 AE8 TRP C 178 TYR C 191 1 14 HELIX 45 AE9 ASN C 193 TYR C 196 5 4 HELIX 46 AF1 CYS C 197 VAL C 224 1 28 HELIX 47 AF2 ALA C 225 GLY C 228 5 4 HELIX 48 AF3 GLU C 232 THR C 237 1 6 HELIX 49 AF4 GLY C 240 ILE C 254 1 15 HELIX 50 AF5 GLU C 261 PHE C 288 1 28 HELIX 51 AF6 ASN C 291 HIS C 299 1 9 HELIX 52 AF7 ASP C 314 LEU C 318 5 5 HELIX 53 AF8 ASP D 11 LEU D 30 1 20 HELIX 54 AF9 TYR D 31 ASP D 36 1 6 HELIX 55 AG1 VAL D 112 SER D 116 5 5 HELIX 56 AG2 GLY D 199 CYS D 201 5 3 HELIX 57 AG3 LEU D 214 VAL D 221 5 8 HELIX 58 AG4 THR D 231 ALA D 249 1 19 HELIX 59 AG5 THR D 250 ALA D 254 5 5 SHEET 1 AA1 2 THR A 8 THR A 9 0 SHEET 2 AA1 2 VAL A 22 LEU A 23 -1 O LEU A 23 N THR A 8 SHEET 1 AA2 2 TRP B 25 VAL B 26 0 SHEET 2 AA2 2 TYR B 29 PHE B 30 -1 O TYR B 29 N VAL B 26 SHEET 1 AA3 2 SER B 65 ILE B 66 0 SHEET 2 AA3 2 TYR B 148 GLY B 149 -1 O TYR B 148 N ILE B 66 SHEET 1 AA4 2 ALA C 12 ARG C 13 0 SHEET 2 AA4 2 SER D 144 ILE D 145 -1 O SER D 144 N ARG C 13 SHEET 1 AA5 2 ARG C 28 VAL C 29 0 SHEET 2 AA5 2 ILE C 49 TYR C 50 -1 O ILE C 49 N VAL C 29 SHEET 1 AA6 2 PHE C 33 TYR C 34 0 SHEET 2 AA6 2 GLN C 45 ILE C 46 -1 O ILE C 46 N PHE C 33 SHEET 1 AA7 2 GLY C 92 LEU C 93 0 SHEET 2 AA7 2 PHE C 175 GLY C 176 -1 O PHE C 175 N LEU C 93 SHEET 1 AA8 2 LYS D 66 VAL D 69 0 SHEET 2 AA8 2 THR D 75 VAL D 78 -1 O VAL D 76 N PHE D 68 SHEET 1 AA9 2 LEU D 90 GLN D 92 0 SHEET 2 AA9 2 LEU D 101 PRO D 103 -1 O GLN D 102 N ALA D 91 SHEET 1 AB1 4 ILE D 134 PRO D 136 0 SHEET 2 AB1 4 GLU D 164 ASP D 174 -1 O VAL D 173 N VAL D 135 SHEET 3 AB1 4 TYR D 179 VAL D 187 -1 O SER D 186 N THR D 167 SHEET 4 AB1 4 ALA D 194 PRO D 197 -1 O ILE D 196 N LEU D 183 SHEET 1 AB2 5 ILE D 134 PRO D 136 0 SHEET 2 AB2 5 GLU D 164 ASP D 174 -1 O VAL D 173 N VAL D 135 SHEET 3 AB2 5 PRO D 156 VAL D 158 -1 N VAL D 157 O ALA D 165 SHEET 4 AB2 5 ILE D 208 VAL D 209 1 O ILE D 208 N PRO D 156 SHEET 5 AB2 5 ASP D 202 VAL D 203 -1 N ASP D 202 O VAL D 209 LINK C FME D 1 N TYR D 2 1555 1555 1.33 LINK NE2 HIS A 91 FE HEC A 401 1555 1555 2.61 LINK NE2 HIS A 124 FE HEC A 404 1555 1555 2.42 LINK NE2 HIS A 136 FE HEC A 402 1555 1555 2.42 LINK NE2 HIS A 248 FE HEC A 403 1555 1555 2.50 LINK NE2 HIS A 309 FE HEC A 404 1555 1555 2.39 LINK NE2 HIS B 190 FE FE2 C 403 1555 1555 2.48 LINK NE2 HIS B 230 FE FE2 C 403 1555 1555 2.60 LINK NE2 HIS C 217 FE FE2 C 403 1555 1555 2.48 LINK OE1 GLU C 232 FE FE2 C 403 1555 1555 2.67 LINK OE2 GLU C 232 FE FE2 C 403 1555 1555 2.53 LINK NE2 HIS C 264 FE FE2 C 403 1555 1555 2.51 CISPEP 1 PRO A 5 PRO A 6 0 -1.61 CISPEP 2 LEU A 152 PRO A 153 0 1.78 CISPEP 3 GLY A 329 PRO A 330 0 1.31 CISPEP 4 GLY C 47 PRO C 48 0 -3.02 CISPEP 5 TYR D 41 PRO D 42 0 0.57 CISPEP 6 VAL D 78 PRO D 79 0 -13.23 SITE 1 AC1 18 TYR A 56 LYS A 57 ASN A 58 VAL A 59 SITE 2 AC1 18 LYS A 60 VAL A 61 LEU A 62 PHE A 70 SITE 3 AC1 18 MET A 74 ILE A 77 THR A 78 CYS A 87 SITE 4 AC1 18 CYS A 90 HIS A 91 LEU A 96 TYR A 104 SITE 5 AC1 18 ALA A 107 ARG A 108 SITE 1 AC2 18 TYR A 89 TYR A 102 PRO A 103 VAL A 106 SITE 2 AC2 18 ALA A 107 MET A 110 LEU A 111 MET A 113 SITE 3 AC2 18 THR A 114 CYS A 132 CYS A 135 HIS A 136 SITE 4 AC2 18 PRO A 140 LEU A 141 PRO A 142 LEU A 289 SITE 5 AC2 18 ARG A 293 PRO A 301 SITE 1 AC3 16 ARG A 202 VAL A 203 VAL A 204 PHE A 230 SITE 2 AC3 16 MET A 233 SER A 237 LEU A 240 CYS A 244 SITE 3 AC3 16 CYS A 247 HIS A 248 PHE A 253 ARG A 264 SITE 4 AC3 16 ALA A 267 TRP A 268 ARG A 272 ILE C 189 SITE 1 AC4 17 HIS A 124 THR A 128 GLY A 129 LEU A 240 SITE 2 AC4 17 GLN A 263 ILE A 266 ALA A 267 ILE A 271 SITE 3 AC4 17 MET A 273 VAL A 274 ASP A 304 CYS A 305 SITE 4 AC4 17 CYS A 308 HIS A 309 THR A 313 LYS A 314 SITE 5 AC4 17 PRO A 315 SITE 1 AC5 4 CYS A 1 SER B 178 TRP B 265 MPG B 306 SITE 1 AC6 16 MET B 174 VAL B 177 SER B 178 PHE B 181 SITE 2 AC6 16 VAL B 182 MET B 185 BCL B 302 MET C 120 SITE 3 AC6 16 ILE C 158 ILE C 177 HIS C 180 ILE C 181 SITE 4 AC6 16 LEU C 184 BCL C 401 BPB C 402 NS5 C 405 SITE 1 AC7 20 PHE B 97 PRO B 124 MET B 127 VAL B 157 SITE 2 AC7 20 PHE B 160 TYR B 162 TRP B 167 HIS B 168 SITE 3 AC7 20 HIS B 173 SER B 176 VAL B 177 PHE B 241 SITE 4 AC7 20 GLY B 244 THR B 248 BCL B 301 BCL B 303 SITE 5 AC7 20 BPB B 304 TYR C 195 TYR C 208 BCL C 401 SITE 1 AC8 15 PHE B 128 PHE B 146 ILE B 150 HIS B 153 SITE 2 AC8 15 LEU B 154 VAL B 157 BCL B 302 BPB B 304 SITE 3 AC8 15 TYR C 195 GLY C 201 ILE C 204 GLY C 205 SITE 4 AC8 15 TYR C 208 BCL C 401 OTP C 406 SITE 1 AC9 19 ILE B 42 ILE B 49 ALA B 96 PHE B 97 SITE 2 AC9 19 TRP B 100 GLU B 104 VAL B 117 PHE B 121 SITE 3 AC9 19 TYR B 148 GLY B 149 HIS B 153 ALA B 237 SITE 4 AC9 19 PHE B 241 BCL B 302 BCL B 303 TYR C 208 SITE 5 AC9 19 LEU C 212 TRP C 250 ILE C 254 SITE 1 AD1 8 TRP B 115 HIS B 116 LEU B 119 SER B 238 SITE 2 AD1 8 ALA C 1 ASP C 2 THR C 5 ILE C 6 SITE 1 AD2 11 DGA A 405 PHE B 179 VAL B 182 HIS B 190 SITE 2 AD2 11 LEU B 193 SER B 223 ILE B 224 GLY B 225 SITE 3 AD2 11 ILE B 229 ASN B 239 MPG C 407 SITE 1 AD3 19 TYR B 162 PHE B 181 BCL B 301 BCL B 302 SITE 2 AD3 19 BCL B 303 PHE C 148 ALA C 151 PHE C 154 SITE 3 AD3 19 VAL C 155 THR C 185 PHE C 187 TYR C 195 SITE 4 AD3 19 HIS C 200 SER C 203 ILE C 204 TYR C 208 SITE 5 AD3 19 ALA C 278 ILE C 282 BPB C 402 SITE 1 AD4 18 PHE B 181 MET B 185 LEU B 189 BCL B 301 SITE 2 AD4 18 PHE C 59 SER C 63 ILE C 66 LEU C 67 SITE 3 AD4 18 LEU C 70 SER C 123 LEU C 124 TRP C 127 SITE 4 AD4 18 ILE C 144 ASN C 147 PHE C 148 SER C 271 SITE 5 AD4 18 BCL C 401 NS5 C 405 SITE 1 AD5 5 HIS B 190 HIS B 230 HIS C 217 GLU C 232 SITE 2 AD5 5 HIS C 264 SITE 1 AD6 15 TYR B 29 ILE B 39 TRP B 100 ARG B 103 SITE 2 AD6 15 HIS C 217 THR C 220 ALA C 246 ALA C 247 SITE 3 AD6 15 TRP C 250 ILE C 254 PHE C 256 ASN C 257 SITE 4 AD6 15 ALA C 258 VAL C 263 TRP C 266 SITE 1 AD7 12 BCL B 301 LEU C 70 GLY C 117 THR C 121 SITE 2 AD7 12 GLY C 159 CYS C 160 VAL C 173 PHE C 175 SITE 3 AD7 12 GLY C 176 ILE C 177 HIS C 180 BPB C 402 SITE 1 AD8 9 PHE B 62 BCL B 303 PRO C 198 PHE C 206 SITE 2 AD8 9 TRP C 295 CYS C 296 ALA C 301 TRP D 17 SITE 3 AD8 9 TRP D 25 SITE 1 AD9 1 MPG B 306 SITE 1 AE1 6 TRP C 23 TYR C 50 GLY C 52 ALA C 53 SITE 2 AE1 6 SER C 54 SER C 133 SITE 1 AE2 3 ASN B 199 HIS C 143 ARG C 265 CRYST1 57.600 82.900 382.100 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017361 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012063 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002617 0.00000