HEADER DE NOVO PROTEIN 18-NOV-16 5MFF TITLE DESIGNED ARMADILLO REPEAT PROTEIN YIIIM5AII IN COMPLEX WITH PEPTIDE TITLE 2 (RR)5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: YIIIM5AII; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: (RR)5; COMPND 7 CHAIN: E, F; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 6 MOL_ID: 2; SOURCE 7 SYNTHETIC: YES; SOURCE 8 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 9 ORGANISM_TAXID: 32630 KEYWDS DESIGNED ARMADILLO REPEAT PROTEIN, PEPTIDE BINDING, DE NOVO PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.HANSEN,P.ERNST,C.REICHEN,C.EWALD,P.MITTL,A.PLUECKTHUN REVDAT 3 08-MAY-24 5MFF 1 REMARK REVDAT 2 21-FEB-18 5MFF 1 JRNL REVDAT 1 13-SEP-17 5MFF 0 JRNL AUTH S.HANSEN,P.ERNST,S.L.B.KONIG,C.REICHEN,C.EWALD,D.NETTELS, JRNL AUTH 2 P.R.E.MITTL,B.SCHULER,A.PLUCKTHUN JRNL TITL CURVATURE OF DESIGNED ARMADILLO REPEAT PROTEINS ALLOWS JRNL TITL 2 MODULAR PEPTIDE BINDING. JRNL REF J. STRUCT. BIOL. V. 201 108 2018 JRNL REFN ESSN 1095-8657 JRNL PMID 28864298 JRNL DOI 10.1016/J.JSB.2017.08.009 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.31 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 105947 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5293 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.000 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.95 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.23 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 7683 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2400 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 7309 REMARK 3 BIN R VALUE (WORKING SET) : 0.2400 REMARK 3 BIN FREE R VALUE : 0.2480 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.87 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 374 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8502 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 56 REMARK 3 SOLVENT ATOMS : 396 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 44.06 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.78570 REMARK 3 B22 (A**2) : -1.77850 REMARK 3 B33 (A**2) : 0.99290 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.260 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.126 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.118 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.126 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.119 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 8789 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 11953 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 3151 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 356 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 1218 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 8789 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 1173 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : 18 ; 1.000 ; HARMONIC REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 10889 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.11 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.47 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 19.36 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 30.6007 6.4727 192.9510 REMARK 3 T TENSOR REMARK 3 T11: -0.3203 T22: -0.2937 REMARK 3 T33: -0.3309 T12: -0.0639 REMARK 3 T13: -0.0062 T23: 0.0046 REMARK 3 L TENSOR REMARK 3 L11: 1.0773 L22: 1.7833 REMARK 3 L33: 0.6320 L12: 0.9823 REMARK 3 L13: -0.2382 L23: -0.5373 REMARK 3 S TENSOR REMARK 3 S11: -0.0253 S12: -0.0353 S13: 0.0376 REMARK 3 S21: -0.0782 S22: 0.0500 S23: 0.0468 REMARK 3 S31: 0.1286 S32: -0.0951 S33: -0.0247 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): -9.2846 15.4607 233.3480 REMARK 3 T TENSOR REMARK 3 T11: 0.3208 T22: 0.1415 REMARK 3 T33: 0.1136 T12: -0.1206 REMARK 3 T13: -0.0407 T23: -0.2012 REMARK 3 L TENSOR REMARK 3 L11: 0.3334 L22: 0.1626 REMARK 3 L33: 0.9586 L12: 0.0854 REMARK 3 L13: -0.5185 L23: 0.1230 REMARK 3 S TENSOR REMARK 3 S11: 0.0603 S12: -0.0175 S13: 0.1363 REMARK 3 S21: 0.1643 S22: -0.1623 S23: -0.0238 REMARK 3 S31: 0.1703 S32: -0.0067 S33: 0.1020 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): -17.0975 16.7311 215.6940 REMARK 3 T TENSOR REMARK 3 T11: -0.3157 T22: -0.3342 REMARK 3 T33: -0.3889 T12: -0.0629 REMARK 3 T13: -0.0145 T23: 0.0163 REMARK 3 L TENSOR REMARK 3 L11: 2.8606 L22: 1.1320 REMARK 3 L33: 1.0480 L12: 0.7863 REMARK 3 L13: 0.9369 L23: 0.0946 REMARK 3 S TENSOR REMARK 3 S11: 0.1682 S12: -0.1280 S13: -0.1604 REMARK 3 S21: 0.0602 S22: -0.0947 S23: -0.1202 REMARK 3 S31: 0.1645 S32: -0.1277 S33: -0.0735 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { D|* } REMARK 3 ORIGIN FOR THE GROUP (A): 30.4128 9.1441 173.7640 REMARK 3 T TENSOR REMARK 3 T11: 0.1796 T22: 0.1834 REMARK 3 T33: 0.3438 T12: -0.1220 REMARK 3 T13: 0.0722 T23: -0.0161 REMARK 3 L TENSOR REMARK 3 L11: 0.2756 L22: 0.3114 REMARK 3 L33: 1.1914 L12: -0.0540 REMARK 3 L13: -0.5519 L23: 0.4308 REMARK 3 S TENSOR REMARK 3 S11: -0.0064 S12: -0.0690 S13: 0.0597 REMARK 3 S21: -0.1525 S22: 0.1598 S23: -0.2075 REMARK 3 S31: -0.3716 S32: 0.1634 S33: -0.1535 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { E|* } REMARK 3 ORIGIN FOR THE GROUP (A): 29.2831 4.6981 182.2440 REMARK 3 T TENSOR REMARK 3 T11: -0.1145 T22: 0.0915 REMARK 3 T33: -0.1582 T12: 0.0013 REMARK 3 T13: 0.0149 T23: 0.1357 REMARK 3 L TENSOR REMARK 3 L11: 0.3144 L22: 0.0299 REMARK 3 L33: 2.3812 L12: 0.6808 REMARK 3 L13: 0.3578 L23: -0.4825 REMARK 3 S TENSOR REMARK 3 S11: -0.0743 S12: 0.0570 S13: 0.0756 REMARK 3 S21: -0.0751 S22: -0.0398 S23: -0.0660 REMARK 3 S31: 0.2602 S32: -0.0446 S33: 0.1141 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: { F|* } REMARK 3 ORIGIN FOR THE GROUP (A): -16.3364 16.7862 225.5090 REMARK 3 T TENSOR REMARK 3 T11: 0.0920 T22: -0.0296 REMARK 3 T33: -0.2161 T12: -0.0033 REMARK 3 T13: -0.1206 T23: 0.0334 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.0052 REMARK 3 L33: 2.3095 L12: -0.9198 REMARK 3 L13: -0.7462 L23: 0.6023 REMARK 3 S TENSOR REMARK 3 S11: 0.0196 S12: -0.0296 S13: 0.0693 REMARK 3 S21: 0.0085 S22: -0.2280 S23: -0.1790 REMARK 3 S31: 0.0860 S32: -0.1390 S33: 0.2083 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5MFF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-NOV-16. REMARK 100 THE DEPOSITION ID IS D_1200002390. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 106118 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 48.310 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 11.00 REMARK 200 R MERGE (I) : 0.10800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.5100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 11.20 REMARK 200 R MERGE FOR SHELL (I) : 4.68000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 60% (NH4)2 SO4, 0.1M HEPES PH 8.0, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 40.87750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 89.82950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.44300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 89.82950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.87750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.44300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 8 REMARK 465 PRO A 9 REMARK 465 GLY A 10 REMARK 465 SER A 11 REMARK 465 SER A 292 REMARK 465 HIS A 293 REMARK 465 GLY B 8 REMARK 465 PRO B 9 REMARK 465 GLY B 10 REMARK 465 SER B 11 REMARK 465 SER B 292 REMARK 465 HIS B 293 REMARK 465 GLY C 8 REMARK 465 PRO C 9 REMARK 465 GLY C 10 REMARK 465 SER C 11 REMARK 465 GLN C 291 REMARK 465 SER C 292 REMARK 465 HIS C 293 REMARK 465 GLY D 8 REMARK 465 PRO D 9 REMARK 465 GLY D 10 REMARK 465 SER D 11 REMARK 465 GLN D 291 REMARK 465 SER D 292 REMARK 465 HIS D 293 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP D 24 134.80 -173.93 REMARK 500 ALA D 39 6.31 -66.44 REMARK 500 ARG F 9 -75.76 -67.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D 466 DISTANCE = 5.87 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO E 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO F 101 DBREF 5MFF A 8 293 PDB 5MFF 5MFF 8 293 DBREF 5MFF B 8 293 PDB 5MFF 5MFF 8 293 DBREF 5MFF C 8 293 PDB 5MFF 5MFF 8 293 DBREF 5MFF D 8 293 PDB 5MFF 5MFF 8 293 DBREF 5MFF E 1 10 PDB 5MFF 5MFF 1 10 DBREF 5MFF F 1 10 PDB 5MFF 5MFF 1 10 SEQRES 1 A 286 GLY PRO GLY SER GLU LEU PRO GLN MET VAL GLN GLN LEU SEQRES 2 A 286 ASN SER PRO ASP GLN GLN GLU LEU GLN SER ALA LEU ARG SEQRES 3 A 286 LYS LEU SER GLN ILE ALA SER GLY GLY ASN GLU GLN ILE SEQRES 4 A 286 GLN ALA VAL ILE ASP ALA GLY ALA LEU PRO ALA LEU VAL SEQRES 5 A 286 GLN LEU LEU SER SER PRO ASN GLU GLN ILE LEU GLN GLU SEQRES 6 A 286 ALA LEU TRP ALA LEU SER ASN ILE ALA SER GLY GLY ASN SEQRES 7 A 286 GLU GLN ILE GLN ALA VAL ILE ASP ALA GLY ALA LEU PRO SEQRES 8 A 286 ALA LEU VAL GLN LEU LEU SER SER PRO ASN GLU GLN ILE SEQRES 9 A 286 LEU GLN GLU ALA LEU TRP ALA LEU SER ASN ILE ALA SER SEQRES 10 A 286 GLY GLY ASN GLU GLN ILE GLN ALA VAL ILE ASP ALA GLY SEQRES 11 A 286 ALA LEU PRO ALA LEU VAL GLN LEU LEU SER SER PRO ASN SEQRES 12 A 286 GLU GLN ILE LEU GLN GLU ALA LEU TRP ALA LEU SER ASN SEQRES 13 A 286 ILE ALA SER GLY GLY ASN GLU GLN ILE GLN ALA VAL ILE SEQRES 14 A 286 ASP ALA GLY ALA LEU PRO ALA LEU VAL GLN LEU LEU SER SEQRES 15 A 286 SER PRO ASN GLU GLN ILE LEU GLN GLU ALA LEU TRP ALA SEQRES 16 A 286 LEU SER ASN ILE ALA SER GLY GLY ASN GLU GLN ILE GLN SEQRES 17 A 286 ALA VAL ILE ASP ALA GLY ALA LEU PRO ALA LEU VAL GLN SEQRES 18 A 286 LEU LEU SER SER PRO ASN GLU GLN ILE LEU GLN GLU ALA SEQRES 19 A 286 LEU TRP ALA LEU SER ASN ILE ALA SER GLY GLY ASN GLU SEQRES 20 A 286 GLN LYS GLN ALA VAL LYS GLU ALA GLY ALA LEU GLU LYS SEQRES 21 A 286 LEU GLU GLN LEU GLN SER HIS GLU ASN GLU LYS ILE GLN SEQRES 22 A 286 LYS GLU ALA GLN GLU ALA LEU GLU LYS LEU GLN SER HIS SEQRES 1 B 286 GLY PRO GLY SER GLU LEU PRO GLN MET VAL GLN GLN LEU SEQRES 2 B 286 ASN SER PRO ASP GLN GLN GLU LEU GLN SER ALA LEU ARG SEQRES 3 B 286 LYS LEU SER GLN ILE ALA SER GLY GLY ASN GLU GLN ILE SEQRES 4 B 286 GLN ALA VAL ILE ASP ALA GLY ALA LEU PRO ALA LEU VAL SEQRES 5 B 286 GLN LEU LEU SER SER PRO ASN GLU GLN ILE LEU GLN GLU SEQRES 6 B 286 ALA LEU TRP ALA LEU SER ASN ILE ALA SER GLY GLY ASN SEQRES 7 B 286 GLU GLN ILE GLN ALA VAL ILE ASP ALA GLY ALA LEU PRO SEQRES 8 B 286 ALA LEU VAL GLN LEU LEU SER SER PRO ASN GLU GLN ILE SEQRES 9 B 286 LEU GLN GLU ALA LEU TRP ALA LEU SER ASN ILE ALA SER SEQRES 10 B 286 GLY GLY ASN GLU GLN ILE GLN ALA VAL ILE ASP ALA GLY SEQRES 11 B 286 ALA LEU PRO ALA LEU VAL GLN LEU LEU SER SER PRO ASN SEQRES 12 B 286 GLU GLN ILE LEU GLN GLU ALA LEU TRP ALA LEU SER ASN SEQRES 13 B 286 ILE ALA SER GLY GLY ASN GLU GLN ILE GLN ALA VAL ILE SEQRES 14 B 286 ASP ALA GLY ALA LEU PRO ALA LEU VAL GLN LEU LEU SER SEQRES 15 B 286 SER PRO ASN GLU GLN ILE LEU GLN GLU ALA LEU TRP ALA SEQRES 16 B 286 LEU SER ASN ILE ALA SER GLY GLY ASN GLU GLN ILE GLN SEQRES 17 B 286 ALA VAL ILE ASP ALA GLY ALA LEU PRO ALA LEU VAL GLN SEQRES 18 B 286 LEU LEU SER SER PRO ASN GLU GLN ILE LEU GLN GLU ALA SEQRES 19 B 286 LEU TRP ALA LEU SER ASN ILE ALA SER GLY GLY ASN GLU SEQRES 20 B 286 GLN LYS GLN ALA VAL LYS GLU ALA GLY ALA LEU GLU LYS SEQRES 21 B 286 LEU GLU GLN LEU GLN SER HIS GLU ASN GLU LYS ILE GLN SEQRES 22 B 286 LYS GLU ALA GLN GLU ALA LEU GLU LYS LEU GLN SER HIS SEQRES 1 C 286 GLY PRO GLY SER GLU LEU PRO GLN MET VAL GLN GLN LEU SEQRES 2 C 286 ASN SER PRO ASP GLN GLN GLU LEU GLN SER ALA LEU ARG SEQRES 3 C 286 LYS LEU SER GLN ILE ALA SER GLY GLY ASN GLU GLN ILE SEQRES 4 C 286 GLN ALA VAL ILE ASP ALA GLY ALA LEU PRO ALA LEU VAL SEQRES 5 C 286 GLN LEU LEU SER SER PRO ASN GLU GLN ILE LEU GLN GLU SEQRES 6 C 286 ALA LEU TRP ALA LEU SER ASN ILE ALA SER GLY GLY ASN SEQRES 7 C 286 GLU GLN ILE GLN ALA VAL ILE ASP ALA GLY ALA LEU PRO SEQRES 8 C 286 ALA LEU VAL GLN LEU LEU SER SER PRO ASN GLU GLN ILE SEQRES 9 C 286 LEU GLN GLU ALA LEU TRP ALA LEU SER ASN ILE ALA SER SEQRES 10 C 286 GLY GLY ASN GLU GLN ILE GLN ALA VAL ILE ASP ALA GLY SEQRES 11 C 286 ALA LEU PRO ALA LEU VAL GLN LEU LEU SER SER PRO ASN SEQRES 12 C 286 GLU GLN ILE LEU GLN GLU ALA LEU TRP ALA LEU SER ASN SEQRES 13 C 286 ILE ALA SER GLY GLY ASN GLU GLN ILE GLN ALA VAL ILE SEQRES 14 C 286 ASP ALA GLY ALA LEU PRO ALA LEU VAL GLN LEU LEU SER SEQRES 15 C 286 SER PRO ASN GLU GLN ILE LEU GLN GLU ALA LEU TRP ALA SEQRES 16 C 286 LEU SER ASN ILE ALA SER GLY GLY ASN GLU GLN ILE GLN SEQRES 17 C 286 ALA VAL ILE ASP ALA GLY ALA LEU PRO ALA LEU VAL GLN SEQRES 18 C 286 LEU LEU SER SER PRO ASN GLU GLN ILE LEU GLN GLU ALA SEQRES 19 C 286 LEU TRP ALA LEU SER ASN ILE ALA SER GLY GLY ASN GLU SEQRES 20 C 286 GLN LYS GLN ALA VAL LYS GLU ALA GLY ALA LEU GLU LYS SEQRES 21 C 286 LEU GLU GLN LEU GLN SER HIS GLU ASN GLU LYS ILE GLN SEQRES 22 C 286 LYS GLU ALA GLN GLU ALA LEU GLU LYS LEU GLN SER HIS SEQRES 1 D 286 GLY PRO GLY SER GLU LEU PRO GLN MET VAL GLN GLN LEU SEQRES 2 D 286 ASN SER PRO ASP GLN GLN GLU LEU GLN SER ALA LEU ARG SEQRES 3 D 286 LYS LEU SER GLN ILE ALA SER GLY GLY ASN GLU GLN ILE SEQRES 4 D 286 GLN ALA VAL ILE ASP ALA GLY ALA LEU PRO ALA LEU VAL SEQRES 5 D 286 GLN LEU LEU SER SER PRO ASN GLU GLN ILE LEU GLN GLU SEQRES 6 D 286 ALA LEU TRP ALA LEU SER ASN ILE ALA SER GLY GLY ASN SEQRES 7 D 286 GLU GLN ILE GLN ALA VAL ILE ASP ALA GLY ALA LEU PRO SEQRES 8 D 286 ALA LEU VAL GLN LEU LEU SER SER PRO ASN GLU GLN ILE SEQRES 9 D 286 LEU GLN GLU ALA LEU TRP ALA LEU SER ASN ILE ALA SER SEQRES 10 D 286 GLY GLY ASN GLU GLN ILE GLN ALA VAL ILE ASP ALA GLY SEQRES 11 D 286 ALA LEU PRO ALA LEU VAL GLN LEU LEU SER SER PRO ASN SEQRES 12 D 286 GLU GLN ILE LEU GLN GLU ALA LEU TRP ALA LEU SER ASN SEQRES 13 D 286 ILE ALA SER GLY GLY ASN GLU GLN ILE GLN ALA VAL ILE SEQRES 14 D 286 ASP ALA GLY ALA LEU PRO ALA LEU VAL GLN LEU LEU SER SEQRES 15 D 286 SER PRO ASN GLU GLN ILE LEU GLN GLU ALA LEU TRP ALA SEQRES 16 D 286 LEU SER ASN ILE ALA SER GLY GLY ASN GLU GLN ILE GLN SEQRES 17 D 286 ALA VAL ILE ASP ALA GLY ALA LEU PRO ALA LEU VAL GLN SEQRES 18 D 286 LEU LEU SER SER PRO ASN GLU GLN ILE LEU GLN GLU ALA SEQRES 19 D 286 LEU TRP ALA LEU SER ASN ILE ALA SER GLY GLY ASN GLU SEQRES 20 D 286 GLN LYS GLN ALA VAL LYS GLU ALA GLY ALA LEU GLU LYS SEQRES 21 D 286 LEU GLU GLN LEU GLN SER HIS GLU ASN GLU LYS ILE GLN SEQRES 22 D 286 LYS GLU ALA GLN GLU ALA LEU GLU LYS LEU GLN SER HIS SEQRES 1 E 10 ARG ARG ARG ARG ARG ARG ARG ARG ARG ARG SEQRES 1 F 10 ARG ARG ARG ARG ARG ARG ARG ARG ARG ARG HET EDO A 301 4 HET EDO A 302 4 HET EDO B 301 4 HET EDO B 302 4 HET EDO B 303 4 HET EDO C 301 4 HET EDO C 302 4 HET EDO C 303 4 HET EDO C 304 4 HET EDO D 301 4 HET EDO D 302 4 HET EDO D 303 4 HET EDO E 101 4 HET EDO F 101 4 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 7 EDO 14(C2 H6 O2) FORMUL 21 HOH *396(H2 O) HELIX 1 AA1 GLU A 12 LEU A 20 1 9 HELIX 2 AA2 ASP A 24 SER A 40 1 17 HELIX 3 AA3 GLY A 42 ALA A 52 1 11 HELIX 4 AA4 GLY A 53 LEU A 61 1 9 HELIX 5 AA5 LEU A 62 SER A 64 5 3 HELIX 6 AA6 ASN A 66 ALA A 81 1 16 HELIX 7 AA7 GLY A 84 ALA A 94 1 11 HELIX 8 AA8 GLY A 95 LEU A 103 1 9 HELIX 9 AA9 LEU A 104 SER A 106 5 3 HELIX 10 AB1 ASN A 108 ALA A 123 1 16 HELIX 11 AB2 GLY A 126 ALA A 136 1 11 HELIX 12 AB3 GLY A 137 LEU A 145 1 9 HELIX 13 AB4 LEU A 146 SER A 148 5 3 HELIX 14 AB5 ASN A 150 ALA A 165 1 16 HELIX 15 AB6 GLY A 168 ALA A 178 1 11 HELIX 16 AB7 GLY A 179 LEU A 187 1 9 HELIX 17 AB8 LEU A 188 SER A 190 5 3 HELIX 18 AB9 ASN A 192 ALA A 207 1 16 HELIX 19 AC1 GLY A 210 ALA A 220 1 11 HELIX 20 AC2 GLY A 221 LEU A 230 1 10 HELIX 21 AC3 ASN A 234 SER A 250 1 17 HELIX 22 AC4 GLY A 252 ALA A 262 1 11 HELIX 23 AC5 ALA A 264 GLN A 272 1 9 HELIX 24 AC6 ASN A 276 GLN A 291 1 16 HELIX 25 AC7 LEU B 13 GLN B 19 1 7 HELIX 26 AC8 LEU B 20 SER B 22 5 3 HELIX 27 AC9 ASP B 24 SER B 40 1 17 HELIX 28 AD1 GLY B 42 ALA B 52 1 11 HELIX 29 AD2 ALA B 54 LEU B 62 1 9 HELIX 30 AD3 ASN B 66 ALA B 81 1 16 HELIX 31 AD4 GLY B 84 ALA B 94 1 11 HELIX 32 AD5 GLY B 95 LEU B 103 1 9 HELIX 33 AD6 LEU B 104 SER B 106 5 3 HELIX 34 AD7 ASN B 108 ALA B 123 1 16 HELIX 35 AD8 GLY B 126 ALA B 136 1 11 HELIX 36 AD9 GLY B 137 LEU B 145 1 9 HELIX 37 AE1 LEU B 146 SER B 148 5 3 HELIX 38 AE2 ASN B 150 ALA B 165 1 16 HELIX 39 AE3 GLY B 168 ALA B 178 1 11 HELIX 40 AE4 GLY B 179 LEU B 188 1 10 HELIX 41 AE5 ASN B 192 ALA B 207 1 16 HELIX 42 AE6 GLY B 210 ALA B 220 1 11 HELIX 43 AE7 ALA B 222 LEU B 230 1 9 HELIX 44 AE8 ASN B 234 SER B 250 1 17 HELIX 45 AE9 GLY B 252 ALA B 262 1 11 HELIX 46 AF1 GLY B 263 GLN B 272 1 10 HELIX 47 AF2 ASN B 276 GLN B 291 1 16 HELIX 48 AF3 LEU C 13 GLN C 19 1 7 HELIX 49 AF4 ASP C 24 ALA C 39 1 16 HELIX 50 AF5 GLY C 42 ALA C 52 1 11 HELIX 51 AF6 GLY C 53 LEU C 61 1 9 HELIX 52 AF7 LEU C 62 SER C 64 5 3 HELIX 53 AF8 ASN C 66 ALA C 81 1 16 HELIX 54 AF9 GLY C 84 ALA C 94 1 11 HELIX 55 AG1 GLY C 95 LEU C 104 1 10 HELIX 56 AG2 ASN C 108 ALA C 123 1 16 HELIX 57 AG3 GLY C 126 ALA C 136 1 11 HELIX 58 AG4 GLY C 137 LEU C 146 1 10 HELIX 59 AG5 ASN C 150 ALA C 165 1 16 HELIX 60 AG6 GLY C 168 ALA C 178 1 11 HELIX 61 AG7 GLY C 179 LEU C 188 1 10 HELIX 62 AG8 ASN C 192 ALA C 207 1 16 HELIX 63 AG9 GLY C 210 ALA C 220 1 11 HELIX 64 AH1 GLY C 221 LEU C 229 1 9 HELIX 65 AH2 LEU C 230 SER C 232 5 3 HELIX 66 AH3 ASN C 234 SER C 250 1 17 HELIX 67 AH4 GLY C 252 ALA C 262 1 11 HELIX 68 AH5 GLY C 263 GLN C 272 1 10 HELIX 69 AH6 ASN C 276 LEU C 290 1 15 HELIX 70 AH7 LEU D 13 LEU D 20 1 8 HELIX 71 AH8 GLN D 25 ALA D 39 1 15 HELIX 72 AH9 GLY D 42 ALA D 52 1 11 HELIX 73 AI1 GLY D 53 LEU D 61 1 9 HELIX 74 AI2 LEU D 62 SER D 64 5 3 HELIX 75 AI3 GLU D 67 ALA D 81 1 15 HELIX 76 AI4 GLY D 84 ALA D 94 1 11 HELIX 77 AI5 GLY D 95 LEU D 103 1 9 HELIX 78 AI6 LEU D 104 SER D 106 5 3 HELIX 79 AI7 ASN D 108 ALA D 123 1 16 HELIX 80 AI8 GLY D 126 ALA D 136 1 11 HELIX 81 AI9 GLY D 137 LEU D 145 1 9 HELIX 82 AJ1 LEU D 146 SER D 148 5 3 HELIX 83 AJ2 ASN D 150 ALA D 165 1 16 HELIX 84 AJ3 GLY D 168 ALA D 178 1 11 HELIX 85 AJ4 GLY D 179 LEU D 187 1 9 HELIX 86 AJ5 LEU D 188 SER D 190 5 3 HELIX 87 AJ6 ASN D 192 ALA D 207 1 16 HELIX 88 AJ7 GLY D 210 ALA D 220 1 11 HELIX 89 AJ8 ALA D 222 LEU D 230 1 9 HELIX 90 AJ9 ASN D 234 SER D 250 1 17 HELIX 91 AK1 GLY D 252 ALA D 262 1 11 HELIX 92 AK2 GLY D 263 LEU D 271 1 9 HELIX 93 AK3 GLN D 272 HIS D 274 5 3 HELIX 94 AK4 ASN D 276 LEU D 290 1 15 SITE 1 AC1 3 GLY A 252 ASN A 253 HOH A 466 SITE 1 AC2 3 HOH A 485 GLU B 193 SER B 232 SITE 1 AC3 6 GLU A 235 GLN A 239 ASN A 276 ASN B 127 SITE 2 AC3 6 GLY B 167 GLY B 168 SITE 1 AC4 5 GLY A 42 PRO B 191 ASN B 192 GLU B 193 SITE 2 AC4 5 GLN B 194 SITE 1 AC5 7 GLY B 179 LEU B 181 PRO B 182 HOH B 404 SITE 2 AC5 7 HOH B 413 GLY C 179 HOH C 409 SITE 1 AC6 3 ILE B 134 ILE C 218 HOH C 417 SITE 1 AC7 6 TRP C 159 SER C 162 ASN C 163 TRP C 201 SITE 2 AC7 6 ASN C 205 HOH D 437 SITE 1 AC8 3 GLY C 84 ASN C 85 GLU C 86 SITE 1 AC9 5 ASN C 169 GLU C 170 GLN C 171 GLU D 275 SITE 2 AC9 5 GLU D 277 SITE 1 AD1 3 PRO D 149 ASN D 150 GLU D 151 SITE 1 AD2 6 GLY A 95 ASP D 93 HOH D 422 HOH D 429 SITE 2 AD2 6 HOH D 430 HOH D 447 SITE 1 AD3 3 GLN D 197 HOH D 437 ARG F 8 SITE 1 AD4 4 GLN B 197 ARG E 7 ARG E 9 HOH E 205 SITE 1 AD5 2 ARG F 7 HOH F 206 CRYST1 81.755 90.886 179.659 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012232 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011003 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005566 0.00000