HEADER TRANSFERASE 20-NOV-16 5MG0 TITLE STRUCTURE OF PAS-GAF FRAGMENT OF DEINOCOCCUS PHYTOCHROME BY SERIAL TITLE 2 FEMTOSECOND CRYSTALLOGRAPHY COMPND MOL_ID: 1; COMPND 2 MOLECULE: BACTERIOPHYTOCHROME; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PHYTOCHROME-LIKE PROTEIN; COMPND 5 EC: 2.7.13.3; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DEINOCOCCUS RADIODURANS (STRAIN ATCC 13939 / SOURCE 3 DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / SOURCE 4 VKM B-1422); SOURCE 5 ORGANISM_TAXID: 243230; SOURCE 6 STRAIN: ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / SOURCE 7 NCIMB 9279 / R1 / VKM B-1422; SOURCE 8 GENE: BPHP, DR_A0050; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS PHYTOCHROME, PHOTORECEPTOR, BILIN, SFX, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR E.S.BURGIE,F.D.FULLER,S.GUL,M.D.MILLER,I.D.YOUNG,A.S.BREWSTER, AUTHOR 2 J.CLINGER,P.ALLER,P.BRAEUER,C.HUTCHISON,R.ALONSO-MORI,J.KERN, AUTHOR 3 V.K.YACHANDRA,J.YANO,N.K.SAUTER,G.N.PHILLIPS JR.,R.D.VIERSTRA, AUTHOR 4 A.M.ORVILLE REVDAT 7 20-NOV-24 5MG0 1 REMARK REVDAT 6 17-JAN-24 5MG0 1 COMPND HETNAM LINK REVDAT 5 14-NOV-18 5MG0 1 SOURCE REMARK REVDAT 4 29-NOV-17 5MG0 1 REMARK REVDAT 3 12-APR-17 5MG0 1 JRNL REVDAT 2 15-MAR-17 5MG0 1 JRNL REVDAT 1 22-FEB-17 5MG0 0 JRNL AUTH F.D.FULLER,S.GUL,R.CHATTERJEE,E.S.BURGIE,I.D.YOUNG, JRNL AUTH 2 H.LEBRETTE,V.SRINIVAS,A.S.BREWSTER,T.MICHELS-CLARK, JRNL AUTH 3 J.A.CLINGER,B.ANDI,M.IBRAHIM,E.PASTOR,C.DE LICHTENBERG, JRNL AUTH 4 R.HUSSEIN,C.J.POLLOCK,M.ZHANG,C.A.STAN,T.KROLL,T.FRANSSON, JRNL AUTH 5 C.WENINGER,M.KUBIN,P.ALLER,L.LASSALLE,P.BRAUER,M.D.MILLER, JRNL AUTH 6 M.AMIN,S.KOROIDOV,C.G.ROESSLER,M.ALLAIRE,R.G.SIERRA, JRNL AUTH 7 P.T.DOCKER,J.M.GLOWNIA,S.NELSON,J.E.KOGLIN,D.ZHU,M.CHOLLET, JRNL AUTH 8 S.SONG,H.LEMKE,M.LIANG,D.SOKARAS,R.ALONSO-MORI,A.ZOUNI, JRNL AUTH 9 J.MESSINGER,U.BERGMANN,A.K.BOAL,J.M.BOLLINGER,C.KREBS, JRNL AUTH10 M.HOGBOM,G.N.PHILLIPS,R.D.VIERSTRA,N.K.SAUTER,A.M.ORVILLE, JRNL AUTH11 J.KERN,V.K.YACHANDRA,J.YANO JRNL TITL DROP-ON-DEMAND SAMPLE DELIVERY FOR STUDYING BIOCATALYSTS IN JRNL TITL 2 ACTION AT X-RAY FREE-ELECTRON LASERS. JRNL REF NAT. METHODS V. 14 443 2017 JRNL REFN ESSN 1548-7105 JRNL PMID 28250468 JRNL DOI 10.1038/NMETH.4195 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.24 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 41718 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.610 REMARK 3 FREE R VALUE TEST SET COUNT : 1925 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.2494 - 3.9744 1.00 2948 141 0.1344 0.1620 REMARK 3 2 3.9744 - 3.1555 1.00 2883 142 0.1424 0.1568 REMARK 3 3 3.1555 - 2.7569 1.00 2844 137 0.1758 0.1971 REMARK 3 4 2.7569 - 2.5049 1.00 2847 132 0.1842 0.2666 REMARK 3 5 2.5049 - 2.3254 1.00 2851 153 0.1861 0.2133 REMARK 3 6 2.3254 - 2.1884 1.00 2831 122 0.1807 0.2126 REMARK 3 7 2.1884 - 2.0788 1.00 2856 150 0.1811 0.2241 REMARK 3 8 2.0788 - 1.9883 1.00 2846 123 0.1989 0.2363 REMARK 3 9 1.9883 - 1.9118 1.00 2830 139 0.2119 0.2672 REMARK 3 10 1.9118 - 1.8458 1.00 2810 139 0.2348 0.2849 REMARK 3 11 1.8458 - 1.7881 1.00 2851 149 0.2575 0.2937 REMARK 3 12 1.7881 - 1.7370 1.00 2823 122 0.2862 0.3371 REMARK 3 13 1.7370 - 1.6913 1.00 2787 139 0.3342 0.3512 REMARK 3 14 1.6913 - 1.6500 0.98 2786 137 0.3942 0.4404 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.300 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2724 REMARK 3 ANGLE : 0.954 3744 REMARK 3 CHIRALITY : 0.054 420 REMARK 3 PLANARITY : 0.006 492 REMARK 3 DIHEDRAL : 20.909 1648 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 550 ) REMARK 3 ORIGIN FOR THE GROUP (A): 100.9954 1.9081 14.0290 REMARK 3 T TENSOR REMARK 3 T11: 0.1887 T22: 0.2497 REMARK 3 T33: 0.2363 T12: -0.0227 REMARK 3 T13: -0.0087 T23: 0.0203 REMARK 3 L TENSOR REMARK 3 L11: 1.1604 L22: 0.9966 REMARK 3 L33: 1.8662 L12: -0.3475 REMARK 3 L13: -0.1544 L23: 0.5285 REMARK 3 S TENSOR REMARK 3 S11: 0.0165 S12: -0.0612 S13: 0.0122 REMARK 3 S21: 0.0440 S22: -0.0187 S23: 0.0417 REMARK 3 S31: -0.0504 S32: 0.0012 S33: 0.0036 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5MG0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-NOV-16. REMARK 100 THE DEPOSITION ID IS D_1200002416. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : FREE ELECTRON LASER REMARK 200 BEAMLINE : MFX REMARK 200 X-RAY GENERATOR MODEL : SLAC LCLS BEAMLINE MFX REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.265 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : COMPOUND REFRACTIVE LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX170-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CCTBX.PRIME, CCTBX.XFEL, PSANA REMARK 200 DATA SCALING SOFTWARE : CCTBX.PRIME REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41877 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 72.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 72.62 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 62.8300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 72.52 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 195.7 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 371.6 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.6.0 REMARK 200 STARTING MODEL: PDB 2O9C LACKING THE BILIN AND ALL NEIGHBORING REMARK 200 SIDE CHAINS REMARK 200 REMARK 200 REMARK: ~50 MICRON CRYSTALLINE PLATES REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, ISOPROPANOL, GLYCEROL, REMARK 280 SODIUM CITRATE, PH 5.6, BATCH MODE, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 45.26750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.69250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 45.26750 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 26.69250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -78.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 181.07000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -14 REMARK 465 ALA A -13 REMARK 465 LEU A -12 REMARK 465 SER A -11 REMARK 465 MET A -10 REMARK 465 THR A -9 REMARK 465 GLY A -8 REMARK 465 GLY A -7 REMARK 465 GLN A -6 REMARK 465 GLN A -5 REMARK 465 MET A -4 REMARK 465 GLY A -3 REMARK 465 ARG A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ARG A 3 REMARK 465 ALA A 107 REMARK 465 ALA A 108 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 402 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 110 NE2 REMARK 620 2 HIS A 325 NE2 54.3 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LBV A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 405 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2O9C RELATED DB: PDB REMARK 900 ALL PREVIOUS DEPOSITIONS WERE FROM SINGLE CRYSTAL DATASET COLLECTED REMARK 900 AT 100 K REMARK 900 RELATED ID: 4Y3I RELATED DB: PDB REMARK 900 ALL PREVIOUS DEPOSITIONS WERE FROM SINGLE CRYSTAL DATASET COLLECTED REMARK 900 AT 100 K REMARK 900 RELATED ID: 4Y5F RELATED DB: PDB REMARK 900 ALL PREVIOUS DEPOSITIONS WERE FROM SINGLE CRYSTAL DATASET COLLECTED REMARK 900 AT 100 K REMARK 900 RELATED ID: 4Q0H RELATED DB: PDB REMARK 900 ALL PREVIOUS DEPOSITIONS WERE FROM SINGLE CRYSTAL DATASET COLLECTED REMARK 900 AT 100 K DBREF 5MG0 A 1 321 UNP Q9RZA4 BPHY_DEIRA 1 321 SEQADV 5MG0 MET A -14 UNP Q9RZA4 INITIATING METHIONINE SEQADV 5MG0 ALA A -13 UNP Q9RZA4 EXPRESSION TAG SEQADV 5MG0 LEU A -12 UNP Q9RZA4 EXPRESSION TAG SEQADV 5MG0 SER A -11 UNP Q9RZA4 EXPRESSION TAG SEQADV 5MG0 MET A -10 UNP Q9RZA4 EXPRESSION TAG SEQADV 5MG0 THR A -9 UNP Q9RZA4 EXPRESSION TAG SEQADV 5MG0 GLY A -8 UNP Q9RZA4 EXPRESSION TAG SEQADV 5MG0 GLY A -7 UNP Q9RZA4 EXPRESSION TAG SEQADV 5MG0 GLN A -6 UNP Q9RZA4 EXPRESSION TAG SEQADV 5MG0 GLN A -5 UNP Q9RZA4 EXPRESSION TAG SEQADV 5MG0 MET A -4 UNP Q9RZA4 EXPRESSION TAG SEQADV 5MG0 GLY A -3 UNP Q9RZA4 EXPRESSION TAG SEQADV 5MG0 ARG A -2 UNP Q9RZA4 EXPRESSION TAG SEQADV 5MG0 GLY A -1 UNP Q9RZA4 EXPRESSION TAG SEQADV 5MG0 SER A 0 UNP Q9RZA4 EXPRESSION TAG SEQADV 5MG0 SER A 307 UNP Q9RZA4 TYR 307 ENGINEERED MUTATION SEQADV 5MG0 HIS A 322 UNP Q9RZA4 EXPRESSION TAG SEQADV 5MG0 HIS A 323 UNP Q9RZA4 EXPRESSION TAG SEQADV 5MG0 HIS A 324 UNP Q9RZA4 EXPRESSION TAG SEQADV 5MG0 HIS A 325 UNP Q9RZA4 EXPRESSION TAG SEQADV 5MG0 HIS A 326 UNP Q9RZA4 EXPRESSION TAG SEQADV 5MG0 HIS A 327 UNP Q9RZA4 EXPRESSION TAG SEQRES 1 A 342 MET ALA LEU SER MET THR GLY GLY GLN GLN MET GLY ARG SEQRES 2 A 342 GLY SER MET SER ARG ASP PRO LEU PRO PHE PHE PRO PRO SEQRES 3 A 342 LEU TYR LEU GLY GLY PRO GLU ILE THR THR GLU ASN CYS SEQRES 4 A 342 GLU ARG GLU PRO ILE HIS ILE PRO GLY SER ILE GLN PRO SEQRES 5 A 342 HIS GLY ALA LEU LEU THR ALA ASP GLY HIS SER GLY GLU SEQRES 6 A 342 VAL LEU GLN MET SER LEU ASN ALA ALA THR PHE LEU GLY SEQRES 7 A 342 GLN GLU PRO THR VAL LEU ARG GLY GLN THR LEU ALA ALA SEQRES 8 A 342 LEU LEU PRO GLU GLN TRP PRO ALA LEU GLN ALA ALA LEU SEQRES 9 A 342 PRO PRO GLY CYS PRO ASP ALA LEU GLN TYR ARG ALA THR SEQRES 10 A 342 LEU ASP TRP PRO ALA ALA GLY HIS LEU SER LEU THR VAL SEQRES 11 A 342 HIS ARG VAL GLY GLU LEU LEU ILE LEU GLU PHE GLU PRO SEQRES 12 A 342 THR GLU ALA TRP ASP SER THR GLY PRO HIS ALA LEU ARG SEQRES 13 A 342 ASN ALA MET PHE ALA LEU GLU SER ALA PRO ASN LEU ARG SEQRES 14 A 342 ALA LEU ALA GLU VAL ALA THR GLN THR VAL ARG GLU LEU SEQRES 15 A 342 THR GLY PHE ASP ARG VAL MET LEU TYR LYS PHE ALA PRO SEQRES 16 A 342 ASP ALA THR GLY GLU VAL ILE ALA GLU ALA ARG ARG GLU SEQRES 17 A 342 GLY LEU HIS ALA PHE LEU GLY HIS ARG PHE PRO ALA SER SEQRES 18 A 342 ASP ILE PRO ALA GLN ALA ARG ALA LEU TYR THR ARG HIS SEQRES 19 A 342 LEU LEU ARG LEU THR ALA ASP THR ARG ALA ALA ALA VAL SEQRES 20 A 342 PRO LEU ASP PRO VAL LEU ASN PRO GLN THR ASN ALA PRO SEQRES 21 A 342 THR PRO LEU GLY GLY ALA VAL LEU ARG ALA THR SER PRO SEQRES 22 A 342 MET HIS MET GLN TYR LEU ARG ASN MET GLY VAL GLY SER SEQRES 23 A 342 SER LEU SER VAL SER VAL VAL VAL GLY GLY GLN LEU TRP SEQRES 24 A 342 GLY LEU ILE ALA CYS HIS HIS GLN THR PRO TYR VAL LEU SEQRES 25 A 342 PRO PRO ASP LEU ARG THR THR LEU GLU SER LEU GLY ARG SEQRES 26 A 342 LEU LEU SER LEU GLN VAL GLN VAL LYS GLU ALA HIS HIS SEQRES 27 A 342 HIS HIS HIS HIS HET LBV A 401 43 HET NI A 402 1 HET CL A 403 1 HET CL A 404 1 HET EDO A 405 4 HETNAM LBV 3-[2-[(Z)-[3-(2-CARBOXYETHYL)-5-[(Z)-(4-ETHENYL-3- HETNAM 2 LBV METHYL-5-OXIDANYLIDENE-PYRROL-2-YLIDENE)METHYL]-4- HETNAM 3 LBV METHYL-PYRROL-1-IUM -2-YLIDENE]METHYL]-5-[(Z)-[(3E)-3- HETNAM 4 LBV ETHYLIDENE-4-METHYL-5-OXIDANYLIDENE-PYRROLIDIN-2- HETNAM 5 LBV YLIDENE]METHYL]-4-METHYL-1H-PYRROL-3- YL]PROPANOIC HETNAM 6 LBV ACID HETNAM NI NICKEL (II) ION HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN LBV 2(R),3(E)- PHYTOCHROMOBILIN HETSYN EDO ETHYLENE GLYCOL FORMUL 2 LBV C33 H37 N4 O6 1+ FORMUL 3 NI NI 2+ FORMUL 4 CL 2(CL 1-) FORMUL 6 EDO C2 H6 O2 FORMUL 7 HOH *159(H2 O) HELIX 1 AA1 PRO A 11 GLY A 15 5 5 HELIX 2 AA2 ASN A 23 GLU A 27 5 5 HELIX 3 AA3 ASN A 57 GLY A 63 1 7 HELIX 4 AA4 GLU A 65 LEU A 69 5 5 HELIX 5 AA5 THR A 73 LEU A 78 1 6 HELIX 6 AA6 GLU A 80 LEU A 89 1 10 HELIX 7 AA7 GLU A 130 SER A 134 5 5 HELIX 8 AA8 PRO A 137 SER A 149 1 13 HELIX 9 AA9 ASN A 152 GLY A 169 1 18 HELIX 10 AB1 PRO A 204 ILE A 208 5 5 HELIX 11 AB2 PRO A 209 HIS A 219 1 11 HELIX 12 AB3 SER A 257 MET A 267 1 11 HELIX 13 AB4 PRO A 298 HIS A 326 1 29 SHEET 1 AA1 7 SER A 34 ILE A 35 0 SHEET 2 AA1 7 VAL A 232 ASP A 235 -1 O VAL A 232 N ILE A 35 SHEET 3 AA1 7 VAL A 51 SER A 55 -1 N MET A 54 O ASP A 235 SHEET 4 AA1 7 ALA A 40 ASP A 45 -1 N THR A 43 O LEU A 52 SHEET 5 AA1 7 LEU A 121 THR A 129 -1 O PHE A 126 N ALA A 40 SHEET 6 AA1 7 HIS A 110 VAL A 118 -1 N SER A 112 O GLU A 127 SHEET 7 AA1 7 TYR A 99 ASP A 104 -1 N LEU A 103 O LEU A 111 SHEET 1 AA2 6 ARG A 202 PHE A 203 0 SHEET 2 AA2 6 GLY A 184 ARG A 191 -1 N GLY A 184 O PHE A 203 SHEET 3 AA2 6 ARG A 172 PHE A 178 -1 N LYS A 177 O GLU A 185 SHEET 4 AA2 6 GLN A 282 HIS A 291 -1 O ALA A 288 N MET A 174 SHEET 5 AA2 6 SER A 271 VAL A 279 -1 N LEU A 273 O CYS A 289 SHEET 6 AA2 6 LEU A 221 THR A 224 -1 N THR A 224 O SER A 272 LINK SG CYS A 24 CBA LBV A 401 1555 1555 1.71 LINK NE2 HIS A 110 NI NI A 402 1555 2765 1.90 LINK NE2 HIS A 325 NI NI A 402 1555 1555 1.93 CISPEP 1 ASP A 235 PRO A 236 0 -9.24 SITE 1 AC1 23 CYS A 24 MET A 174 TYR A 176 PHE A 198 SITE 2 AC1 23 PHE A 203 ASP A 207 ILE A 208 PRO A 209 SITE 3 AC1 23 TYR A 216 ARG A 254 THR A 256 SER A 257 SITE 4 AC1 23 HIS A 260 TYR A 263 SER A 272 SER A 274 SITE 5 AC1 23 HIS A 290 HOH A 547 HOH A 559 HOH A 570 SITE 6 AC1 23 HOH A 579 HOH A 597 HOH A 598 SITE 1 AC2 5 HIS A 110 HIS A 324 HIS A 325 CL A 403 SITE 2 AC2 5 EDO A 405 SITE 1 AC3 1 NI A 402 SITE 1 AC4 4 GLU A 25 PRO A 209 ALA A 210 HOH A 609 SITE 1 AC5 4 THR A 102 HIS A 110 HIS A 326 NI A 402 CRYST1 90.535 53.385 80.912 90.00 116.32 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011045 0.000000 0.005464 0.00000 SCALE2 0.000000 0.018732 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013789 0.00000