HEADER TRANSCRIPTION 24-NOV-16 5MHK TITLE ICP4 DNA-BINDING DOMAIN IN COMPLEX WITH 19MER DNA DUPLEX FROM ITS OWN TITLE 2 PROMOTER COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'- COMPND 3 D(*GP*CP*TP*CP*CP*GP*TP*GP*TP*GP*GP*AP*CP*GP*AP*TP*CP*GP*G)-3'); COMPND 4 CHAIN: G, E; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: SYNTHETIC DNA, SEQUENCES MATCHES A REGION FROM THE COMPND 7 ICP4 PROMOTER (IE3); COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA (5'- COMPND 10 D(*GP*CP*TP*CP*CP*GP*TP*GP*TP*GP*GP*AP*CP*GP*AP*TP*CP*GP*G)-3'); COMPND 11 CHAIN: H, F; COMPND 12 ENGINEERED: YES; COMPND 13 OTHER_DETAILS: SYNTHETIC DNA, SEQUENCES MATCHES A REGION FROM THE COMPND 14 ICP4 PROMOTER (IE3); COMPND 15 MOL_ID: 3; COMPND 16 MOLECULE: RS1; COMPND 17 CHAIN: A, C, D, B; COMPND 18 ENGINEERED: YES; COMPND 19 OTHER_DETAILS: DNA BINDING DOMAIN OF ICP4, RESIDUES 258-487; COMPND 20 MOL_ID: 4; COMPND 21 MOLECULE: ICP4 DNA BINDING DOMAIN; COMPND 22 CHAIN: J; COMPND 23 FRAGMENT: LIKELY N-TERMINUS OF CHAIN D, BUT CHAIN CONNECTIVITY IS COMPND 24 AMBIGUOUS; COMPND 25 ENGINEERED: YES; COMPND 26 OTHER_DETAILS: DNA BINDING DOMAIN OF ICP4, RESIDUES 258-487 SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HUMAN HERPESVIRUS 1; SOURCE 4 ORGANISM_TAXID: 10298; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: HUMAN HERPESVIRUS 1; SOURCE 8 ORGANISM_TAXID: 10298; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: HUMAN HERPESVIRUS 1; SOURCE 11 ORGANISM_COMMON: HHV-1; SOURCE 12 ORGANISM_TAXID: 10298; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 EXPRESSION_SYSTEM_VARIANT: T7 EXPRESS LYSY; SOURCE 16 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 17 EXPRESSION_SYSTEM_PLASMID: PET-21A; SOURCE 18 MOL_ID: 4; SOURCE 19 ORGANISM_SCIENTIFIC: HUMAN HERPESVIRUS 1; SOURCE 20 ORGANISM_COMMON: HHV-1; SOURCE 21 ORGANISM_TAXID: 10298; SOURCE 22 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 23 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 24 EXPRESSION_SYSTEM_VARIANT: T7 EXPRESS LYSY; SOURCE 25 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 26 EXPRESSION_SYSTEM_PLASMID: PET-21A KEYWDS TRANSCRIPTION FACTOR, HERPES VIRUS, INTERCALATION, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR R.B.TUNNICLIFFE,M.P.LOCKHART-CAIRNS,C.LEVY,P.MOULD,T.A.JOWITT,H.SITO, AUTHOR 2 C.BALDOCK,R.M.SANDRI-GOLDIN,A.P.GOLOVANOV REVDAT 3 10-APR-19 5MHK 1 SOURCE REVDAT 2 06-SEP-17 5MHK 1 JRNL REVDAT 1 24-MAY-17 5MHK 0 JRNL AUTH R.B.TUNNICLIFFE,M.P.LOCKHART-CAIRNS,C.LEVY,A.P.MOULD, JRNL AUTH 2 T.A.JOWITT,H.SITO,C.BALDOCK,R.M.SANDRI-GOLDIN,A.P.GOLOVANOV JRNL TITL THE HERPES VIRAL TRANSCRIPTION FACTOR ICP4 FORMS A NOVEL DNA JRNL TITL 2 RECOGNITION COMPLEX. JRNL REF NUCLEIC ACIDS RES. V. 45 8064 2017 JRNL REFN ESSN 1362-4962 JRNL PMID 28505309 JRNL DOI 10.1093/NAR/GKX419 REMARK 2 REMARK 2 RESOLUTION. 2.28 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.28 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 71.30 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 58104 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2849 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 71.3376 - 6.1877 0.99 2959 157 0.1975 0.2246 REMARK 3 2 6.1877 - 4.9117 1.00 2852 148 0.2116 0.2472 REMARK 3 3 4.9117 - 4.2909 1.00 2808 154 0.1837 0.1919 REMARK 3 4 4.2909 - 3.8986 1.00 2766 151 0.1784 0.1931 REMARK 3 5 3.8986 - 3.6192 1.00 2784 139 0.1855 0.2045 REMARK 3 6 3.6192 - 3.4058 1.00 2779 142 0.1880 0.2384 REMARK 3 7 3.4058 - 3.2353 1.00 2740 152 0.2186 0.2468 REMARK 3 8 3.2353 - 3.0944 1.00 2765 136 0.2254 0.2824 REMARK 3 9 3.0944 - 2.9753 1.00 2788 116 0.2307 0.2737 REMARK 3 10 2.9753 - 2.8726 1.00 2757 147 0.2272 0.2643 REMARK 3 11 2.8726 - 2.7828 1.00 2704 151 0.2197 0.2600 REMARK 3 12 2.7828 - 2.7033 1.00 2763 128 0.2408 0.3094 REMARK 3 13 2.7033 - 2.6321 1.00 2739 125 0.2475 0.3083 REMARK 3 14 2.6321 - 2.5679 1.00 2712 128 0.2550 0.2721 REMARK 3 15 2.5679 - 2.5095 1.00 2747 156 0.2555 0.3168 REMARK 3 16 2.5095 - 2.4561 1.00 2693 154 0.2632 0.3036 REMARK 3 17 2.4561 - 2.4069 1.00 2724 152 0.2643 0.3199 REMARK 3 18 2.4069 - 2.3615 1.00 2713 146 0.2672 0.3340 REMARK 3 19 2.3615 - 2.3193 1.00 2765 126 0.2843 0.3116 REMARK 3 20 2.3193 - 2.2800 1.00 2697 141 0.2986 0.3377 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 7600 REMARK 3 ANGLE : 0.559 10629 REMARK 3 CHIRALITY : 0.037 1101 REMARK 3 PLANARITY : 0.004 1172 REMARK 3 DIHEDRAL : 16.446 4200 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5MHK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-NOV-16. REMARK 100 THE DEPOSITION ID IS D_1200000512. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58110 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.280 REMARK 200 RESOLUTION RANGE LOW (A) : 71.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.16130 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.6900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.28 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 1.33300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.390 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM SULFATE, 0.1 BIS/TRIS PH REMARK 280 5.5 & 25% W/V PEG3350 [SG1 B8 MOLECULAR DIMENSIONS]. REMARK 280 CRYOPROTECTED WITH 20% PEG 200, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.75500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 100.94500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 50.36500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 100.94500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.75500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 50.36500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, C, D, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -118.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DC H 19 REMARK 465 DG E 21 REMARK 465 DC E 22 REMARK 465 DT E 23 REMARK 465 DC E 24 REMARK 465 DA F 17 REMARK 465 DG F 18 REMARK 465 DC F 19 REMARK 465 GLY A 257 REMARK 465 PRO A 258 REMARK 465 ALA A 259 REMARK 465 ALA A 260 REMARK 465 SER A 261 REMARK 465 ALA A 262 REMARK 465 GLY A 263 REMARK 465 ARG A 264 REMARK 465 ILE A 265 REMARK 465 GLU A 266 REMARK 465 ARG A 267 REMARK 465 ARG A 268 REMARK 465 ARG A 269 REMARK 465 ALA A 270 REMARK 465 ARG A 271 REMARK 465 ALA A 272 REMARK 465 ALA A 273 REMARK 465 VAL A 274 REMARK 465 ALA A 275 REMARK 465 GLY A 276 REMARK 465 ARG A 277 REMARK 465 ASP A 278 REMARK 465 ALA A 279 REMARK 465 THR A 280 REMARK 465 GLY A 281 REMARK 465 ARG A 282 REMARK 465 PHE A 283 REMARK 465 THR A 284 REMARK 465 ALA A 285 REMARK 465 GLY A 286 REMARK 465 GLN A 287 REMARK 465 PRO A 288 REMARK 465 ARG A 289 REMARK 465 ARG A 290 REMARK 465 VAL A 291 REMARK 465 GLU A 292 REMARK 465 LEU A 293 REMARK 465 ASP A 294 REMARK 465 ALA A 295 REMARK 465 ASP A 296 REMARK 465 ALA A 297 REMARK 465 THR A 298 REMARK 465 SER A 299 REMARK 465 THR A 486 REMARK 465 GLY A 487 REMARK 465 GLY C 257 REMARK 465 PRO C 258 REMARK 465 ALA C 259 REMARK 465 ALA C 260 REMARK 465 SER C 261 REMARK 465 ALA C 262 REMARK 465 GLY C 263 REMARK 465 ARG C 264 REMARK 465 ILE C 265 REMARK 465 GLU C 266 REMARK 465 ARG C 267 REMARK 465 ARG C 268 REMARK 465 ARG C 269 REMARK 465 ALA C 270 REMARK 465 ARG C 271 REMARK 465 ALA C 272 REMARK 465 ALA C 273 REMARK 465 VAL C 274 REMARK 465 ALA C 275 REMARK 465 GLY C 276 REMARK 465 ARG C 277 REMARK 465 ASP C 278 REMARK 465 ALA C 279 REMARK 465 THR C 280 REMARK 465 GLY C 281 REMARK 465 ARG C 282 REMARK 465 PHE C 283 REMARK 465 THR C 284 REMARK 465 ALA C 285 REMARK 465 GLY C 286 REMARK 465 GLN C 287 REMARK 465 PRO C 288 REMARK 465 ARG C 289 REMARK 465 ARG C 290 REMARK 465 VAL C 291 REMARK 465 GLY C 487 REMARK 465 GLY D 257 REMARK 465 PRO D 258 REMARK 465 ALA D 259 REMARK 465 ALA D 260 REMARK 465 SER D 261 REMARK 465 ALA D 262 REMARK 465 GLY D 263 REMARK 465 ARG D 264 REMARK 465 ILE D 265 REMARK 465 GLU D 266 REMARK 465 ARG D 267 REMARK 465 ARG D 268 REMARK 465 ARG D 269 REMARK 465 ALA D 270 REMARK 465 ARG D 271 REMARK 465 ALA D 272 REMARK 465 ALA D 273 REMARK 465 VAL D 274 REMARK 465 ALA D 275 REMARK 465 GLY D 276 REMARK 465 ARG D 277 REMARK 465 ASP D 278 REMARK 465 ALA D 279 REMARK 465 THR D 280 REMARK 465 GLY D 281 REMARK 465 ARG D 282 REMARK 465 PHE D 283 REMARK 465 THR D 284 REMARK 465 ALA D 285 REMARK 465 GLY D 286 REMARK 465 GLN D 287 REMARK 465 PRO D 288 REMARK 465 THR D 486 REMARK 465 GLY D 487 REMARK 465 GLY B 257 REMARK 465 PRO B 258 REMARK 465 ALA B 259 REMARK 465 ALA B 260 REMARK 465 SER B 261 REMARK 465 ALA B 262 REMARK 465 GLY B 263 REMARK 465 ARG B 264 REMARK 465 ILE B 265 REMARK 465 GLU B 266 REMARK 465 ARG B 267 REMARK 465 ARG B 268 REMARK 465 ARG B 269 REMARK 465 ALA B 270 REMARK 465 ARG B 271 REMARK 465 ALA B 272 REMARK 465 ALA B 273 REMARK 465 VAL B 274 REMARK 465 ALA B 275 REMARK 465 GLY B 276 REMARK 465 ARG B 277 REMARK 465 ASP B 278 REMARK 465 ALA B 279 REMARK 465 THR B 280 REMARK 465 GLY B 281 REMARK 465 ARG B 282 REMARK 465 PHE B 283 REMARK 465 THR B 284 REMARK 465 ALA B 285 REMARK 465 GLY B 286 REMARK 465 SER B 417 REMARK 465 SER B 418 REMARK 465 THR B 486 REMARK 465 GLY B 487 REMARK 465 ALA J 285 REMARK 465 GLY J 286 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP D 340 -9.72 -59.39 REMARK 500 SER D 411 -155.97 -79.58 REMARK 500 ASN D 416 -12.27 -150.27 REMARK 500 ARG B 290 85.60 -172.00 REMARK 500 ALA B 413 46.11 -98.83 REMARK 500 ARG B 415 40.62 -108.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG H 101 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC H 1 O3' REMARK 620 2 DC H 2 OP1 52.4 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG H 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL C 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 502 DBREF 5MHK G 21 39 PDB 5MHK 5MHK 21 39 DBREF 5MHK H 1 19 PDB 5MHK 5MHK 1 19 DBREF 5MHK E 21 39 PDB 5MHK 5MHK 21 39 DBREF 5MHK F 1 19 PDB 5MHK 5MHK 1 19 DBREF 5MHK A 258 487 UNP Q09I77 Q09I77_HHV1 258 487 DBREF 5MHK C 258 487 UNP Q09I77 Q09I77_HHV1 258 487 DBREF 5MHK D 258 487 UNP Q09I77 Q09I77_HHV1 258 487 DBREF 5MHK B 258 487 UNP Q09I77 Q09I77_HHV1 258 487 DBREF 5MHK J 283 286 UNP Q09I77 Q09I77_HHV1 283 286 SEQADV 5MHK GLY A 257 UNP Q09I77 EXPRESSION TAG SEQADV 5MHK GLY C 257 UNP Q09I77 EXPRESSION TAG SEQADV 5MHK GLY D 257 UNP Q09I77 EXPRESSION TAG SEQADV 5MHK GLY B 257 UNP Q09I77 EXPRESSION TAG SEQRES 1 G 19 DG DC DT DC DC DG DT DG DT DG DG DA DC SEQRES 2 G 19 DG DA DT DC DG DG SEQRES 1 H 19 DC DC DG DA DT DC DG DT DC DC DA DC DA SEQRES 2 H 19 DC DG DG DA DG DC SEQRES 1 E 19 DG DC DT DC DC DG DT DG DT DG DG DA DC SEQRES 2 E 19 DG DA DT DC DG DG SEQRES 1 F 19 DC DC DG DA DT DC DG DT DC DC DA DC DA SEQRES 2 F 19 DC DG DG DA DG DC SEQRES 1 A 231 GLY PRO ALA ALA SER ALA GLY ARG ILE GLU ARG ARG ARG SEQRES 2 A 231 ALA ARG ALA ALA VAL ALA GLY ARG ASP ALA THR GLY ARG SEQRES 3 A 231 PHE THR ALA GLY GLN PRO ARG ARG VAL GLU LEU ASP ALA SEQRES 4 A 231 ASP ALA THR SER GLY ALA PHE TYR ALA ARG TYR ARG ASP SEQRES 5 A 231 GLY TYR VAL SER GLY GLU PRO TRP PRO GLY ALA GLY PRO SEQRES 6 A 231 PRO PRO PRO GLY ARG VAL LEU TYR GLY GLY LEU GLY ASP SEQRES 7 A 231 SER ARG PRO GLY LEU TRP GLY ALA PRO GLU ALA GLU GLU SEQRES 8 A 231 ALA ARG ARG ARG PHE GLU ALA SER GLY ALA PRO ALA ALA SEQRES 9 A 231 VAL TRP ALA PRO GLU LEU GLY ASP ALA ALA GLN GLN TYR SEQRES 10 A 231 ALA LEU ILE THR ARG LEU LEU TYR THR PRO ASP ALA GLU SEQRES 11 A 231 ALA MET GLY TRP LEU GLN ASN PRO ARG VAL VAL PRO GLY SEQRES 12 A 231 ASP VAL ALA LEU ASP GLN ALA CYS PHE ARG ILE SER GLY SEQRES 13 A 231 ALA ALA ARG ASN SER SER SER PHE ILE THR GLY SER VAL SEQRES 14 A 231 ALA ARG ALA VAL PRO HIS LEU GLY TYR ALA MET ALA ALA SEQRES 15 A 231 GLY ARG PHE GLY TRP GLY LEU ALA HIS ALA ALA ALA ALA SEQRES 16 A 231 VAL ALA MET SER ARG ARG TYR ASP ARG ALA GLN LYS GLY SEQRES 17 A 231 PHE LEU LEU THR SER LEU ARG ARG ALA TYR ALA PRO LEU SEQRES 18 A 231 LEU ALA ARG GLU ASN ALA ALA LEU THR GLY SEQRES 1 C 231 GLY PRO ALA ALA SER ALA GLY ARG ILE GLU ARG ARG ARG SEQRES 2 C 231 ALA ARG ALA ALA VAL ALA GLY ARG ASP ALA THR GLY ARG SEQRES 3 C 231 PHE THR ALA GLY GLN PRO ARG ARG VAL GLU LEU ASP ALA SEQRES 4 C 231 ASP ALA THR SER GLY ALA PHE TYR ALA ARG TYR ARG ASP SEQRES 5 C 231 GLY TYR VAL SER GLY GLU PRO TRP PRO GLY ALA GLY PRO SEQRES 6 C 231 PRO PRO PRO GLY ARG VAL LEU TYR GLY GLY LEU GLY ASP SEQRES 7 C 231 SER ARG PRO GLY LEU TRP GLY ALA PRO GLU ALA GLU GLU SEQRES 8 C 231 ALA ARG ARG ARG PHE GLU ALA SER GLY ALA PRO ALA ALA SEQRES 9 C 231 VAL TRP ALA PRO GLU LEU GLY ASP ALA ALA GLN GLN TYR SEQRES 10 C 231 ALA LEU ILE THR ARG LEU LEU TYR THR PRO ASP ALA GLU SEQRES 11 C 231 ALA MET GLY TRP LEU GLN ASN PRO ARG VAL VAL PRO GLY SEQRES 12 C 231 ASP VAL ALA LEU ASP GLN ALA CYS PHE ARG ILE SER GLY SEQRES 13 C 231 ALA ALA ARG ASN SER SER SER PHE ILE THR GLY SER VAL SEQRES 14 C 231 ALA ARG ALA VAL PRO HIS LEU GLY TYR ALA MET ALA ALA SEQRES 15 C 231 GLY ARG PHE GLY TRP GLY LEU ALA HIS ALA ALA ALA ALA SEQRES 16 C 231 VAL ALA MET SER ARG ARG TYR ASP ARG ALA GLN LYS GLY SEQRES 17 C 231 PHE LEU LEU THR SER LEU ARG ARG ALA TYR ALA PRO LEU SEQRES 18 C 231 LEU ALA ARG GLU ASN ALA ALA LEU THR GLY SEQRES 1 D 231 GLY PRO ALA ALA SER ALA GLY ARG ILE GLU ARG ARG ARG SEQRES 2 D 231 ALA ARG ALA ALA VAL ALA GLY ARG ASP ALA THR GLY ARG SEQRES 3 D 231 PHE THR ALA GLY GLN PRO ARG ARG VAL GLU LEU ASP ALA SEQRES 4 D 231 ASP ALA THR SER GLY ALA PHE TYR ALA ARG TYR ARG ASP SEQRES 5 D 231 GLY TYR VAL SER GLY GLU PRO TRP PRO GLY ALA GLY PRO SEQRES 6 D 231 PRO PRO PRO GLY ARG VAL LEU TYR GLY GLY LEU GLY ASP SEQRES 7 D 231 SER ARG PRO GLY LEU TRP GLY ALA PRO GLU ALA GLU GLU SEQRES 8 D 231 ALA ARG ARG ARG PHE GLU ALA SER GLY ALA PRO ALA ALA SEQRES 9 D 231 VAL TRP ALA PRO GLU LEU GLY ASP ALA ALA GLN GLN TYR SEQRES 10 D 231 ALA LEU ILE THR ARG LEU LEU TYR THR PRO ASP ALA GLU SEQRES 11 D 231 ALA MET GLY TRP LEU GLN ASN PRO ARG VAL VAL PRO GLY SEQRES 12 D 231 ASP VAL ALA LEU ASP GLN ALA CYS PHE ARG ILE SER GLY SEQRES 13 D 231 ALA ALA ARG ASN SER SER SER PHE ILE THR GLY SER VAL SEQRES 14 D 231 ALA ARG ALA VAL PRO HIS LEU GLY TYR ALA MET ALA ALA SEQRES 15 D 231 GLY ARG PHE GLY TRP GLY LEU ALA HIS ALA ALA ALA ALA SEQRES 16 D 231 VAL ALA MET SER ARG ARG TYR ASP ARG ALA GLN LYS GLY SEQRES 17 D 231 PHE LEU LEU THR SER LEU ARG ARG ALA TYR ALA PRO LEU SEQRES 18 D 231 LEU ALA ARG GLU ASN ALA ALA LEU THR GLY SEQRES 1 B 231 GLY PRO ALA ALA SER ALA GLY ARG ILE GLU ARG ARG ARG SEQRES 2 B 231 ALA ARG ALA ALA VAL ALA GLY ARG ASP ALA THR GLY ARG SEQRES 3 B 231 PHE THR ALA GLY GLN PRO ARG ARG VAL GLU LEU ASP ALA SEQRES 4 B 231 ASP ALA THR SER GLY ALA PHE TYR ALA ARG TYR ARG ASP SEQRES 5 B 231 GLY TYR VAL SER GLY GLU PRO TRP PRO GLY ALA GLY PRO SEQRES 6 B 231 PRO PRO PRO GLY ARG VAL LEU TYR GLY GLY LEU GLY ASP SEQRES 7 B 231 SER ARG PRO GLY LEU TRP GLY ALA PRO GLU ALA GLU GLU SEQRES 8 B 231 ALA ARG ARG ARG PHE GLU ALA SER GLY ALA PRO ALA ALA SEQRES 9 B 231 VAL TRP ALA PRO GLU LEU GLY ASP ALA ALA GLN GLN TYR SEQRES 10 B 231 ALA LEU ILE THR ARG LEU LEU TYR THR PRO ASP ALA GLU SEQRES 11 B 231 ALA MET GLY TRP LEU GLN ASN PRO ARG VAL VAL PRO GLY SEQRES 12 B 231 ASP VAL ALA LEU ASP GLN ALA CYS PHE ARG ILE SER GLY SEQRES 13 B 231 ALA ALA ARG ASN SER SER SER PHE ILE THR GLY SER VAL SEQRES 14 B 231 ALA ARG ALA VAL PRO HIS LEU GLY TYR ALA MET ALA ALA SEQRES 15 B 231 GLY ARG PHE GLY TRP GLY LEU ALA HIS ALA ALA ALA ALA SEQRES 16 B 231 VAL ALA MET SER ARG ARG TYR ASP ARG ALA GLN LYS GLY SEQRES 17 B 231 PHE LEU LEU THR SER LEU ARG ARG ALA TYR ALA PRO LEU SEQRES 18 B 231 LEU ALA ARG GLU ASN ALA ALA LEU THR GLY SEQRES 1 J 4 PHE THR ALA GLY HET MG H 101 1 HET SO4 A 501 5 HET SO4 A 502 5 HET CL C 501 1 HET SO4 C 502 5 HET SO4 C 503 5 HET SO4 D 501 5 HET SO4 B 501 5 HET SO4 B 502 5 HETNAM MG MAGNESIUM ION HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION FORMUL 10 MG MG 2+ FORMUL 11 SO4 7(O4 S 2-) FORMUL 13 CL CL 1- FORMUL 19 HOH *236(H2 O) HELIX 1 AA1 GLY A 300 ALA A 304 5 5 HELIX 2 AA2 ALA A 342 GLY A 356 1 15 HELIX 3 AA3 ALA A 363 GLY A 367 5 5 HELIX 4 AA4 ASP A 368 TYR A 381 1 14 HELIX 5 AA5 GLU A 386 ASN A 393 1 8 HELIX 6 AA6 VAL A 397 SER A 411 1 15 HELIX 7 AA7 HIS A 431 GLY A 439 1 9 HELIX 8 AA8 ARG A 440 GLY A 442 5 3 HELIX 9 AA9 TRP A 443 SER A 455 1 13 HELIX 10 AB1 ASP A 459 LEU A 485 1 27 HELIX 11 AB2 ASP C 294 SER C 299 1 6 HELIX 12 AB3 GLY C 300 ARG C 305 1 6 HELIX 13 AB4 ALA C 342 GLY C 356 1 15 HELIX 14 AB5 ALA C 363 GLY C 367 5 5 HELIX 15 AB6 ASP C 368 LEU C 380 1 13 HELIX 16 AB7 GLU C 386 ASN C 393 1 8 HELIX 17 AB8 VAL C 397 GLY C 412 1 16 HELIX 18 AB9 HIS C 431 GLY C 439 1 9 HELIX 19 AC1 ARG C 440 GLY C 442 5 3 HELIX 20 AC2 TRP C 443 SER C 455 1 13 HELIX 21 AC3 ASP C 459 LEU C 485 1 27 HELIX 22 AC4 ASP D 294 SER D 299 1 6 HELIX 23 AC5 GLY D 300 ARG D 305 1 6 HELIX 24 AC6 ALA D 342 GLY D 356 1 15 HELIX 25 AC7 ALA D 363 GLY D 367 5 5 HELIX 26 AC8 ASP D 368 TYR D 381 1 14 HELIX 27 AC9 GLU D 386 ASN D 393 1 8 HELIX 28 AD1 VAL D 397 SER D 411 1 15 HELIX 29 AD2 HIS D 431 GLY D 439 1 9 HELIX 30 AD3 ARG D 440 GLY D 442 5 3 HELIX 31 AD4 TRP D 443 SER D 455 1 13 HELIX 32 AD5 ASP D 459 LEU D 485 1 27 HELIX 33 AD6 ASP B 294 SER B 299 1 6 HELIX 34 AD7 GLY B 300 ARG B 305 1 6 HELIX 35 AD8 ALA B 342 GLY B 356 1 15 HELIX 36 AD9 ALA B 363 GLY B 367 5 5 HELIX 37 AE1 ASP B 368 TYR B 381 1 14 HELIX 38 AE2 GLU B 386 ASN B 393 1 8 HELIX 39 AE3 VAL B 397 GLY B 412 1 16 HELIX 40 AE4 HIS B 431 GLY B 439 1 9 HELIX 41 AE5 ARG B 440 GLY B 442 5 3 HELIX 42 AE6 TRP B 443 SER B 455 1 13 HELIX 43 AE7 ASP B 459 LEU B 485 1 27 SHEET 1 AA1 2 ARG A 307 ASP A 308 0 SHEET 2 AA1 2 ARG D 395 VAL D 396 -1 O VAL D 396 N ARG A 307 SHEET 1 AA2 2 ARG A 326 LEU A 328 0 SHEET 2 AA2 2 SER A 335 PRO A 337 -1 O ARG A 336 N VAL A 327 SHEET 1 AA3 2 ARG C 326 LEU C 328 0 SHEET 2 AA3 2 SER C 335 PRO C 337 -1 O ARG C 336 N VAL C 327 SHEET 1 AA4 2 ARG D 326 LEU D 328 0 SHEET 2 AA4 2 SER D 335 PRO D 337 -1 O ARG D 336 N VAL D 327 SHEET 1 AA5 2 ARG B 326 LEU B 328 0 SHEET 2 AA5 2 SER B 335 PRO B 337 -1 O ARG B 336 N VAL B 327 LINK O3' DC H 1 MG MG H 101 1555 1555 2.78 LINK OP1 DC H 2 MG MG H 101 1555 1555 2.86 SITE 1 AC1 2 DC H 1 DC H 2 SITE 1 AC2 3 PRO A 383 ASP A 384 ARG A 471 SITE 1 AC3 6 LEU A 391 GLN A 392 ALA A 426 ARG A 427 SITE 2 AC3 6 MET A 454 HOH A 606 SITE 1 AC4 1 SER C 312 SITE 1 AC5 4 PRO C 383 ASP C 384 ARG C 471 HOH C 619 SITE 1 AC6 4 LEU C 391 ARG C 427 MET C 454 HOH C 631 SITE 1 AC7 5 PRO D 383 ASP D 384 ARG D 471 HOH D 601 SITE 2 AC7 5 HOH D 609 SITE 1 AC8 5 PRO B 383 ASP B 384 ALA B 385 ARG B 471 SITE 2 AC8 5 HOH B 610 SITE 1 AC9 4 ARG A 472 TYR B 310 VAL B 311 SER B 312 CRYST1 61.510 100.730 201.890 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016258 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009928 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004953 0.00000