HEADER PHOTOSYNTHESIS 01-DEC-16 5MJO TITLE STRUCTURE OF PSB29 AT 1.55A COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN THF1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS ELONGATUS; SOURCE 3 ORGANISM_TAXID: 146786; SOURCE 4 GENE: THF1, TLR1134; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: KRX; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PRSETA MODIFIED KEYWDS PHOTOSYSTEM II FTSH, PHOTOSYNTHESIS EXPDTA X-RAY DIFFRACTION AUTHOR J.W.MURRAY,A.KOZLO REVDAT 3 08-MAY-24 5MJO 1 REMARK REVDAT 2 16-OCT-19 5MJO 1 REMARK REVDAT 1 23-AUG-17 5MJO 0 JRNL AUTH M.BEC KOVA,J.YU,V.KRYNICKA,A.KOZLO,S.SHAO,P.KONIK,J.KOMENDA, JRNL AUTH 2 J.W.MURRAY,P.J.NIXON JRNL TITL STRUCTURE OF PSB29/THF1 AND ITS ASSOCIATION WITH THE FTSH JRNL TITL 2 PROTEASE COMPLEX INVOLVED IN PHOTOSYSTEM II REPAIR IN JRNL TITL 3 CYANOBACTERIA. JRNL REF PHILOS. TRANS. R. SOC. V. 372 2017 JRNL REF 2 LOND., B, BIOL. SCI. JRNL REFN ESSN 1471-2970 JRNL PMID 28808107 JRNL DOI 10.1098/RSTB.2016.0394 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.16 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 22013 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.136 REMARK 3 R VALUE (WORKING SET) : 0.133 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1187 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1627 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.01 REMARK 3 BIN R VALUE (WORKING SET) : 0.1470 REMARK 3 BIN FREE R VALUE SET COUNT : 72 REMARK 3 BIN FREE R VALUE : 0.2540 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1507 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 110 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.95 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.20000 REMARK 3 B22 (A**2) : -0.15000 REMARK 3 B33 (A**2) : 0.30000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.02000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.100 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.083 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.057 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.561 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.972 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1559 ; 0.024 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1433 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2118 ; 2.070 ; 1.957 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3326 ; 1.170 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 191 ; 5.057 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 81 ;30.300 ;23.827 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 265 ;14.068 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;22.643 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 233 ; 0.145 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1738 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 323 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 752 ; 2.985 ; 1.322 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 751 ; 2.933 ; 1.315 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 941 ; 3.546 ; 1.983 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 942 ; 3.581 ; 1.987 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 807 ; 5.385 ; 1.899 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 808 ; 5.383 ; 1.901 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1176 ; 6.009 ; 2.661 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 1790 ; 5.248 ;17.119 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 1780 ; 5.226 ;16.982 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 2992 ; 4.505 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 69 ;21.688 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 2998 ;13.092 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 9 REMARK 3 ORIGIN FOR THE GROUP (A): 15.1430 22.3585 1.4612 REMARK 3 T TENSOR REMARK 3 T11: 0.0230 T22: 0.0135 REMARK 3 T33: 0.0110 T12: -0.0055 REMARK 3 T13: 0.0037 T23: -0.0100 REMARK 3 L TENSOR REMARK 3 L11: 3.9664 L22: 2.4204 REMARK 3 L33: 1.0763 L12: 1.8202 REMARK 3 L13: -1.9013 L23: -0.3613 REMARK 3 S TENSOR REMARK 3 S11: 0.1304 S12: -0.1313 S13: 0.1871 REMARK 3 S21: -0.0267 S22: -0.0479 S23: 0.1054 REMARK 3 S31: -0.0887 S32: 0.0670 S33: -0.0825 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 10 A 25 REMARK 3 ORIGIN FOR THE GROUP (A): 9.2906 8.8478 6.8393 REMARK 3 T TENSOR REMARK 3 T11: 0.0310 T22: 0.0068 REMARK 3 T33: 0.0036 T12: 0.0012 REMARK 3 T13: -0.0071 T23: -0.0000 REMARK 3 L TENSOR REMARK 3 L11: 0.2854 L22: 0.6585 REMARK 3 L33: 0.2194 L12: 0.3384 REMARK 3 L13: -0.0437 L23: 0.1820 REMARK 3 S TENSOR REMARK 3 S11: 0.0117 S12: -0.0214 S13: -0.0057 REMARK 3 S21: 0.0328 S22: 0.0033 S23: -0.0264 REMARK 3 S31: 0.0186 S32: 0.0275 S33: -0.0151 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 26 A 41 REMARK 3 ORIGIN FOR THE GROUP (A): 10.6918 10.9943 -3.8067 REMARK 3 T TENSOR REMARK 3 T11: 0.0213 T22: 0.0034 REMARK 3 T33: 0.0026 T12: 0.0032 REMARK 3 T13: -0.0015 T23: 0.0007 REMARK 3 L TENSOR REMARK 3 L11: 0.5362 L22: 3.8296 REMARK 3 L33: 0.5730 L12: 1.1482 REMARK 3 L13: -0.4469 L23: -0.9368 REMARK 3 S TENSOR REMARK 3 S11: 0.0029 S12: -0.0183 S13: -0.0207 REMARK 3 S21: 0.0381 S22: -0.0222 S23: -0.0904 REMARK 3 S31: 0.0214 S32: 0.0368 S33: 0.0194 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 42 A 51 REMARK 3 ORIGIN FOR THE GROUP (A): 4.5283 24.3139 -11.5178 REMARK 3 T TENSOR REMARK 3 T11: 0.0346 T22: 0.0014 REMARK 3 T33: 0.0086 T12: 0.0022 REMARK 3 T13: -0.0025 T23: 0.0006 REMARK 3 L TENSOR REMARK 3 L11: 0.7127 L22: 0.4472 REMARK 3 L33: 0.2061 L12: 0.5558 REMARK 3 L13: -0.2411 L23: -0.2293 REMARK 3 S TENSOR REMARK 3 S11: 0.0424 S12: -0.0105 S13: 0.0194 REMARK 3 S21: 0.0448 S22: -0.0125 S23: 0.0202 REMARK 3 S31: -0.0331 S32: -0.0002 S33: -0.0298 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 52 A 72 REMARK 3 ORIGIN FOR THE GROUP (A): -0.0202 6.2278 -3.8675 REMARK 3 T TENSOR REMARK 3 T11: 0.0325 T22: 0.0088 REMARK 3 T33: 0.0029 T12: -0.0019 REMARK 3 T13: -0.0020 T23: -0.0015 REMARK 3 L TENSOR REMARK 3 L11: 0.0451 L22: 0.6332 REMARK 3 L33: 0.5866 L12: -0.1665 REMARK 3 L13: 0.1572 L23: -0.6065 REMARK 3 S TENSOR REMARK 3 S11: -0.0021 S12: 0.0025 S13: -0.0010 REMARK 3 S21: 0.0206 S22: 0.0008 S23: 0.0005 REMARK 3 S31: -0.0195 S32: -0.0078 S33: 0.0013 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 73 A 80 REMARK 3 ORIGIN FOR THE GROUP (A): 0.2667 9.9490 3.5438 REMARK 3 T TENSOR REMARK 3 T11: 0.0435 T22: 0.0094 REMARK 3 T33: 0.0122 T12: -0.0056 REMARK 3 T13: 0.0019 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 0.5783 L22: 3.2360 REMARK 3 L33: 2.0932 L12: -0.0739 REMARK 3 L13: 1.0519 L23: -0.8888 REMARK 3 S TENSOR REMARK 3 S11: 0.0947 S12: -0.0624 S13: -0.0347 REMARK 3 S21: 0.0410 S22: 0.0062 S23: 0.1669 REMARK 3 S31: 0.1456 S32: -0.1140 S33: -0.1009 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 81 A 102 REMARK 3 ORIGIN FOR THE GROUP (A): -5.2064 17.2473 -5.8296 REMARK 3 T TENSOR REMARK 3 T11: 0.0288 T22: 0.0042 REMARK 3 T33: 0.0046 T12: 0.0004 REMARK 3 T13: -0.0016 T23: 0.0008 REMARK 3 L TENSOR REMARK 3 L11: 0.3472 L22: 0.0122 REMARK 3 L33: 0.2214 L12: 0.0591 REMARK 3 L13: 0.2641 L23: 0.0389 REMARK 3 S TENSOR REMARK 3 S11: 0.0121 S12: -0.0095 S13: -0.0088 REMARK 3 S21: 0.0028 S22: -0.0029 S23: -0.0017 REMARK 3 S31: 0.0168 S32: -0.0094 S33: -0.0092 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 103 A 125 REMARK 3 ORIGIN FOR THE GROUP (A): -10.8983 18.8168 -24.3420 REMARK 3 T TENSOR REMARK 3 T11: 0.0298 T22: 0.0039 REMARK 3 T33: 0.0032 T12: 0.0014 REMARK 3 T13: -0.0039 T23: 0.0019 REMARK 3 L TENSOR REMARK 3 L11: 0.0239 L22: 0.2051 REMARK 3 L33: 0.1133 L12: -0.0440 REMARK 3 L13: -0.0292 L23: -0.0424 REMARK 3 S TENSOR REMARK 3 S11: 0.0032 S12: -0.0014 S13: -0.0007 REMARK 3 S21: -0.0177 S22: 0.0039 S23: 0.0111 REMARK 3 S31: -0.0068 S32: -0.0012 S33: -0.0071 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 126 A 149 REMARK 3 ORIGIN FOR THE GROUP (A): -0.7226 13.4610 -18.7117 REMARK 3 T TENSOR REMARK 3 T11: 0.0284 T22: 0.0015 REMARK 3 T33: 0.0050 T12: -0.0004 REMARK 3 T13: -0.0027 T23: 0.0000 REMARK 3 L TENSOR REMARK 3 L11: 0.3366 L22: 0.2733 REMARK 3 L33: 0.0613 L12: 0.2687 REMARK 3 L13: 0.0340 L23: 0.0847 REMARK 3 S TENSOR REMARK 3 S11: -0.0052 S12: -0.0076 S13: 0.0123 REMARK 3 S21: -0.0145 S22: -0.0030 S23: 0.0151 REMARK 3 S31: -0.0051 S32: 0.0016 S33: 0.0082 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 150 A 189 REMARK 3 ORIGIN FOR THE GROUP (A): 3.3755 7.8198 -23.5011 REMARK 3 T TENSOR REMARK 3 T11: 0.0299 T22: 0.0022 REMARK 3 T33: 0.0024 T12: -0.0008 REMARK 3 T13: -0.0005 T23: 0.0000 REMARK 3 L TENSOR REMARK 3 L11: 0.0713 L22: 0.2059 REMARK 3 L33: 0.0316 L12: -0.1064 REMARK 3 L13: 0.0202 L23: 0.0001 REMARK 3 S TENSOR REMARK 3 S11: -0.0060 S12: 0.0010 S13: 0.0017 REMARK 3 S21: 0.0005 S22: 0.0041 S23: -0.0015 REMARK 3 S31: 0.0057 S32: 0.0031 S33: 0.0018 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5MJO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-DEC-16. REMARK 100 THE DEPOSITION ID IS D_1200002570. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91730 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23219 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 46.160 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 16.90 REMARK 200 R MERGE (I) : 0.11400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.2976 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 16.68 REMARK 200 R MERGE FOR SHELL (I) : 1.09800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.650 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BICINE, PH 9.0, 20% W/V PEG REMARK 280 6000, PH 5.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 28.36500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -16 REMARK 465 ARG A -15 REMARK 465 GLY A -14 REMARK 465 SER A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 GLY A -6 REMARK 465 LEU A -5 REMARK 465 VAL A -4 REMARK 465 PRO A -3 REMARK 465 ARG A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 GLN A 2 REMARK 465 ASN A 3 REMARK 465 ARG A 190 REMARK 465 SER A 191 REMARK 465 LEU A 192 REMARK 465 MET A 193 REMARK 465 LYS A 194 REMARK 465 GLU A 195 REMARK 465 LEU A 196 REMARK 465 VAL A 197 REMARK 465 GLU A 198 REMARK 465 GLN A 199 REMARK 465 GLU A 200 REMARK 465 ARG A 201 REMARK 465 LYS A 202 REMARK 465 ARG A 203 REMARK 465 ARG A 204 REMARK 465 ALA A 205 REMARK 465 GLN A 206 REMARK 465 GLN A 207 REMARK 465 THR A 208 REMARK 465 SER A 209 REMARK 465 ALA A 210 REMARK 465 PRO A 211 REMARK 465 PRO A 212 REMARK 465 ALA A 213 REMARK 465 VAL A 214 REMARK 465 ASP A 215 REMARK 465 ALA A 216 REMARK 465 SER A 217 REMARK 465 SER A 218 REMARK 465 ASP A 219 REMARK 465 ALA A 220 REMARK 465 PRO A 221 REMARK 465 ALA A 222 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN A 108 O HOH A 401 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 115 CB SER A 115 OG 0.087 REMARK 500 GLU A 145 CD GLU A 145 OE1 -0.084 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 27 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 41 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG A 133 NE - CZ - NH1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG A 133 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG A 174 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG A 180 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 153 71.33 -119.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 303 DBREF 5MJO A 1 222 UNP Q8DJT8 THF1_THEEB 1 222 SEQADV 5MJO MET A -16 UNP Q8DJT8 INITIATING METHIONINE SEQADV 5MJO ARG A -15 UNP Q8DJT8 EXPRESSION TAG SEQADV 5MJO GLY A -14 UNP Q8DJT8 EXPRESSION TAG SEQADV 5MJO SER A -13 UNP Q8DJT8 EXPRESSION TAG SEQADV 5MJO HIS A -12 UNP Q8DJT8 EXPRESSION TAG SEQADV 5MJO HIS A -11 UNP Q8DJT8 EXPRESSION TAG SEQADV 5MJO HIS A -10 UNP Q8DJT8 EXPRESSION TAG SEQADV 5MJO HIS A -9 UNP Q8DJT8 EXPRESSION TAG SEQADV 5MJO HIS A -8 UNP Q8DJT8 EXPRESSION TAG SEQADV 5MJO HIS A -7 UNP Q8DJT8 EXPRESSION TAG SEQADV 5MJO GLY A -6 UNP Q8DJT8 EXPRESSION TAG SEQADV 5MJO LEU A -5 UNP Q8DJT8 EXPRESSION TAG SEQADV 5MJO VAL A -4 UNP Q8DJT8 EXPRESSION TAG SEQADV 5MJO PRO A -3 UNP Q8DJT8 EXPRESSION TAG SEQADV 5MJO ARG A -2 UNP Q8DJT8 EXPRESSION TAG SEQADV 5MJO GLY A -1 UNP Q8DJT8 EXPRESSION TAG SEQADV 5MJO SER A 0 UNP Q8DJT8 EXPRESSION TAG SEQRES 1 A 239 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY LEU VAL SEQRES 2 A 239 PRO ARG GLY SER MET GLN ASN PRO ARG THR VAL SER ASP SEQRES 3 A 239 THR LYS ARG ALA PHE TYR ALA ALA HIS THR ARG PRO ILE SEQRES 4 A 239 HIS SER ILE TYR ARG ARG PHE ILE GLU GLU LEU LEU VAL SEQRES 5 A 239 GLU ILE HIS LEU LEU ARG VAL ASN VAL ASP PHE ARG TYR SEQRES 6 A 239 SER PRO LEU PHE ALA LEU GLY VAL VAL THR ALA PHE ASP SEQRES 7 A 239 GLN PHE MET GLU GLY TYR GLN PRO GLU GLY ASP ARG ASP SEQRES 8 A 239 ARG ILE PHE HIS ALA LEU CYS VAL ALA GLU GLU MET ASN SEQRES 9 A 239 PRO GLN GLN LEU LYS GLU ASP ALA ALA SER TRP GLN GLN SEQRES 10 A 239 TYR GLN GLY ARG PRO LEU SER GLN ILE LEU ASP GLU LEU SEQRES 11 A 239 ASN SER GLY GLN PRO SER ALA PRO LEU ASN SER LEU ASN SEQRES 12 A 239 HIS THR GLY LYS TYR SER ARG LEU HIS ALA VAL GLY LEU SEQRES 13 A 239 TYR ALA PHE LEU GLN GLU LEU ALA GLY GLU VAL THR ILE SEQRES 14 A 239 HIS LEU ASN GLU THR LEU ASP GLN LEU ALA PRO VAL ILE SEQRES 15 A 239 PRO LEU PRO ILE GLU LYS VAL LYS ARG ASP LEU GLU LEU SEQRES 16 A 239 TYR ARG SER ASN LEU ASP LYS ILE ASN GLN ALA ARG SER SEQRES 17 A 239 LEU MET LYS GLU LEU VAL GLU GLN GLU ARG LYS ARG ARG SEQRES 18 A 239 ALA GLN GLN THR SER ALA PRO PRO ALA VAL ASP ALA SER SEQRES 19 A 239 SER ASP ALA PRO ALA HET HG A 301 1 HET IOD A 302 1 HET IOD A 303 1 HETNAM HG MERCURY (II) ION HETNAM IOD IODIDE ION FORMUL 2 HG HG 2+ FORMUL 3 IOD 2(I 1-) FORMUL 5 HOH *110(H2 O) HELIX 1 AA1 THR A 6 HIS A 18 1 13 HELIX 2 AA2 HIS A 23 VAL A 42 1 20 HELIX 3 AA3 SER A 49 MET A 64 1 16 HELIX 4 AA4 GLY A 71 GLU A 84 1 14 HELIX 5 AA5 ASN A 87 SER A 97 1 11 HELIX 6 AA6 TRP A 98 GLN A 102 5 5 HELIX 7 AA7 PRO A 105 SER A 115 1 11 HELIX 8 AA8 PRO A 121 HIS A 127 5 7 HELIX 9 AA9 SER A 132 LEU A 146 1 15 HELIX 10 AB1 HIS A 153 ALA A 162 1 10 HELIX 11 AB2 PRO A 168 ALA A 189 1 22 LINK O PHE A 77 HG HG A 301 1555 1555 3.03 CISPEP 1 GLN A 68 PRO A 69 0 2.14 CISPEP 2 ALA A 120 PRO A 121 0 8.34 SITE 1 AC1 3 PHE A 77 CYS A 81 IOD A 303 SITE 1 AC2 1 MET A 86 SITE 1 AC3 3 PHE A 77 LEU A 80 HG A 301 CRYST1 31.240 56.730 47.730 90.00 104.72 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.032010 0.000000 0.008410 0.00000 SCALE2 0.000000 0.017627 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021662 0.00000