data_5MND # _entry.id 5MND # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5MND pdb_00005mnd 10.2210/pdb5mnd/pdb WWPDB D_1200002745 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-03-29 2 'Structure model' 1 1 2018-01-24 3 'Structure model' 1 2 2018-11-14 4 'Structure model' 1 3 2022-03-30 5 'Structure model' 1 4 2024-01-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Data collection' 3 3 'Structure model' 'Data collection' 4 4 'Structure model' Advisory 5 4 'Structure model' 'Author supporting evidence' 6 4 'Structure model' 'Database references' 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' diffrn_source 2 2 'Structure model' pdbx_unobs_or_zero_occ_atoms 3 3 'Structure model' diffrn 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_audit_support 6 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 7 5 'Structure model' chem_comp_atom 8 5 'Structure model' chem_comp_bond 9 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_diffrn_source.pdbx_synchrotron_beamline' 2 2 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 3 3 'Structure model' '_diffrn.pdbx_serial_crystal_experiment' 4 4 'Structure model' '_database_2.pdbx_DOI' 5 4 'Structure model' '_database_2.pdbx_database_accession' 6 4 'Structure model' '_pdbx_audit_support.funding_organization' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5MND _pdbx_database_status.recvd_initial_deposition_date 2016-12-13 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Oberthuer, D.' 1 ? 'Chapman, H.' 2 ? 'Doerner, K.' 3 ? 'Xavier, P.L.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Sci Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2045-2322 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 7 _citation.language ? _citation.page_first 44628 _citation.page_last 44628 _citation.title 'Double-flow focused liquid injector for efficient serial femtosecond crystallography.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/srep44628 _citation.pdbx_database_id_PubMed 28300169 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Oberthuer, D.' 1 ? primary 'Knoska, J.' 2 ? primary 'Wiedorn, M.O.' 3 ? primary 'Beyerlein, K.R.' 4 ? primary 'Bushnell, D.A.' 5 ? primary 'Kovaleva, E.G.' 6 ? primary 'Heymann, M.' 7 ? primary 'Gumprecht, L.' 8 ? primary 'Kirian, R.A.' 9 ? primary 'Barty, A.' 10 ? primary 'Mariani, V.' 11 ? primary 'Tolstikova, A.' 12 ? primary 'Adriano, L.' 13 ? primary 'Awel, S.' 14 ? primary 'Barthelmess, M.' 15 ? primary 'Dorner, K.' 16 ? primary 'Xavier, P.L.' 17 ? primary 'Yefanov, O.' 18 ? primary 'James, D.R.' 19 ? primary 'Nelson, G.' 20 ? primary 'Wang, D.' 21 ? primary 'Calvey, G.' 22 ? primary 'Chen, Y.' 23 ? primary 'Schmidt, A.' 24 ? primary 'Szczepek, M.' 25 ? primary 'Frielingsdorf, S.' 26 ? primary 'Lenz, O.' 27 ? primary 'Snell, E.' 28 ? primary 'Robinson, P.J.' 29 ? primary 'Sarler, B.' 30 ? primary 'Belsak, G.' 31 ? primary 'Macek, M.' 32 ? primary 'Wilde, F.' 33 ? primary 'Aquila, A.' 34 ? primary 'Boutet, S.' 35 ? primary 'Liang, M.' 36 ? primary 'Hunter, M.S.' 37 ? primary 'Scheerer, P.' 38 ? primary 'Lipscomb, J.D.' 39 ? primary 'Weierstall, U.' 40 ? primary 'Kornberg, R.D.' 41 ? primary 'Spence, J.C.' 42 ? primary 'Pollack, L.' 43 ? primary 'Chapman, H.N.' 44 ? primary 'Bajt, S.' 45 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat Granulin 28783.861 1 ? ? ? ? 2 water nat water 18.015 80 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Matrix protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SLRYSRHDGTSCVIDNHHLKSLGAVLNDVRRKKDRIREAEYEPIIDIADQYMVTEDPFRGPGKNVRITLFKEIRRVHPDT MKLVCNWSGKEFLRETWTRFISEEFPITTDQEIMDLWFELQLRPMHPNRCYKFTMQYALGAHPDYVAHDVIRQQDPYYVG PNNIERINLSKKGFAFPLTCLQSVYNDNFERFFDDVLWPYFYRPLVYVGTTSAEIEEIMIEVSLLFKIKEFAPDVPLFTG PAY ; _entity_poly.pdbx_seq_one_letter_code_can ;SLRYSRHDGTSCVIDNHHLKSLGAVLNDVRRKKDRIREAEYEPIIDIADQYMVTEDPFRGPGKNVRITLFKEIRRVHPDT MKLVCNWSGKEFLRETWTRFISEEFPITTDQEIMDLWFELQLRPMHPNRCYKFTMQYALGAHPDYVAHDVIRQQDPYYVG PNNIERINLSKKGFAFPLTCLQSVYNDNFERFFDDVLWPYFYRPLVYVGTTSAEIEEIMIEVSLLFKIKEFAPDVPLFTG PAY ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 LEU n 1 3 ARG n 1 4 TYR n 1 5 SER n 1 6 ARG n 1 7 HIS n 1 8 ASP n 1 9 GLY n 1 10 THR n 1 11 SER n 1 12 CYS n 1 13 VAL n 1 14 ILE n 1 15 ASP n 1 16 ASN n 1 17 HIS n 1 18 HIS n 1 19 LEU n 1 20 LYS n 1 21 SER n 1 22 LEU n 1 23 GLY n 1 24 ALA n 1 25 VAL n 1 26 LEU n 1 27 ASN n 1 28 ASP n 1 29 VAL n 1 30 ARG n 1 31 ARG n 1 32 LYS n 1 33 LYS n 1 34 ASP n 1 35 ARG n 1 36 ILE n 1 37 ARG n 1 38 GLU n 1 39 ALA n 1 40 GLU n 1 41 TYR n 1 42 GLU n 1 43 PRO n 1 44 ILE n 1 45 ILE n 1 46 ASP n 1 47 ILE n 1 48 ALA n 1 49 ASP n 1 50 GLN n 1 51 TYR n 1 52 MET n 1 53 VAL n 1 54 THR n 1 55 GLU n 1 56 ASP n 1 57 PRO n 1 58 PHE n 1 59 ARG n 1 60 GLY n 1 61 PRO n 1 62 GLY n 1 63 LYS n 1 64 ASN n 1 65 VAL n 1 66 ARG n 1 67 ILE n 1 68 THR n 1 69 LEU n 1 70 PHE n 1 71 LYS n 1 72 GLU n 1 73 ILE n 1 74 ARG n 1 75 ARG n 1 76 VAL n 1 77 HIS n 1 78 PRO n 1 79 ASP n 1 80 THR n 1 81 MET n 1 82 LYS n 1 83 LEU n 1 84 VAL n 1 85 CYS n 1 86 ASN n 1 87 TRP n 1 88 SER n 1 89 GLY n 1 90 LYS n 1 91 GLU n 1 92 PHE n 1 93 LEU n 1 94 ARG n 1 95 GLU n 1 96 THR n 1 97 TRP n 1 98 THR n 1 99 ARG n 1 100 PHE n 1 101 ILE n 1 102 SER n 1 103 GLU n 1 104 GLU n 1 105 PHE n 1 106 PRO n 1 107 ILE n 1 108 THR n 1 109 THR n 1 110 ASP n 1 111 GLN n 1 112 GLU n 1 113 ILE n 1 114 MET n 1 115 ASP n 1 116 LEU n 1 117 TRP n 1 118 PHE n 1 119 GLU n 1 120 LEU n 1 121 GLN n 1 122 LEU n 1 123 ARG n 1 124 PRO n 1 125 MET n 1 126 HIS n 1 127 PRO n 1 128 ASN n 1 129 ARG n 1 130 CYS n 1 131 TYR n 1 132 LYS n 1 133 PHE n 1 134 THR n 1 135 MET n 1 136 GLN n 1 137 TYR n 1 138 ALA n 1 139 LEU n 1 140 GLY n 1 141 ALA n 1 142 HIS n 1 143 PRO n 1 144 ASP n 1 145 TYR n 1 146 VAL n 1 147 ALA n 1 148 HIS n 1 149 ASP n 1 150 VAL n 1 151 ILE n 1 152 ARG n 1 153 GLN n 1 154 GLN n 1 155 ASP n 1 156 PRO n 1 157 TYR n 1 158 TYR n 1 159 VAL n 1 160 GLY n 1 161 PRO n 1 162 ASN n 1 163 ASN n 1 164 ILE n 1 165 GLU n 1 166 ARG n 1 167 ILE n 1 168 ASN n 1 169 LEU n 1 170 SER n 1 171 LYS n 1 172 LYS n 1 173 GLY n 1 174 PHE n 1 175 ALA n 1 176 PHE n 1 177 PRO n 1 178 LEU n 1 179 THR n 1 180 CYS n 1 181 LEU n 1 182 GLN n 1 183 SER n 1 184 VAL n 1 185 TYR n 1 186 ASN n 1 187 ASP n 1 188 ASN n 1 189 PHE n 1 190 GLU n 1 191 ARG n 1 192 PHE n 1 193 PHE n 1 194 ASP n 1 195 ASP n 1 196 VAL n 1 197 LEU n 1 198 TRP n 1 199 PRO n 1 200 TYR n 1 201 PHE n 1 202 TYR n 1 203 ARG n 1 204 PRO n 1 205 LEU n 1 206 VAL n 1 207 TYR n 1 208 VAL n 1 209 GLY n 1 210 THR n 1 211 THR n 1 212 SER n 1 213 ALA n 1 214 GLU n 1 215 ILE n 1 216 GLU n 1 217 GLU n 1 218 ILE n 1 219 MET n 1 220 ILE n 1 221 GLU n 1 222 VAL n 1 223 SER n 1 224 LEU n 1 225 LEU n 1 226 PHE n 1 227 LYS n 1 228 ILE n 1 229 LYS n 1 230 GLU n 1 231 PHE n 1 232 ALA n 1 233 PRO n 1 234 ASP n 1 235 VAL n 1 236 PRO n 1 237 LEU n 1 238 PHE n 1 239 THR n 1 240 GLY n 1 241 PRO n 1 242 ALA n 1 243 TYR n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 243 _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Cydia pomonella granulosis virus (isolate Mexico/1963)' _entity_src_nat.pdbx_ncbi_taxonomy_id 654905 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 6 6 SER SER A . n A 1 2 LEU 2 7 7 LEU LEU A . n A 1 3 ARG 3 8 8 ARG ARG A . n A 1 4 TYR 4 9 9 TYR TYR A . n A 1 5 SER 5 10 10 SER SER A . n A 1 6 ARG 6 11 11 ARG ARG A . n A 1 7 HIS 7 12 12 HIS HIS A . n A 1 8 ASP 8 13 13 ASP ASP A . n A 1 9 GLY 9 14 14 GLY GLY A . n A 1 10 THR 10 15 15 THR THR A . n A 1 11 SER 11 16 16 SER SER A . n A 1 12 CYS 12 17 17 CYS CYS A . n A 1 13 VAL 13 18 18 VAL VAL A . n A 1 14 ILE 14 19 19 ILE ILE A . n A 1 15 ASP 15 20 20 ASP ASP A . n A 1 16 ASN 16 21 21 ASN ASN A . n A 1 17 HIS 17 22 22 HIS HIS A . n A 1 18 HIS 18 23 23 HIS HIS A . n A 1 19 LEU 19 24 24 LEU LEU A . n A 1 20 LYS 20 25 25 LYS LYS A . n A 1 21 SER 21 26 26 SER SER A . n A 1 22 LEU 22 27 27 LEU LEU A . n A 1 23 GLY 23 28 28 GLY GLY A . n A 1 24 ALA 24 29 29 ALA ALA A . n A 1 25 VAL 25 30 30 VAL VAL A . n A 1 26 LEU 26 31 31 LEU LEU A . n A 1 27 ASN 27 32 32 ASN ASN A . n A 1 28 ASP 28 33 33 ASP ASP A . n A 1 29 VAL 29 34 34 VAL VAL A . n A 1 30 ARG 30 35 35 ARG ARG A . n A 1 31 ARG 31 36 36 ARG ARG A . n A 1 32 LYS 32 37 37 LYS LYS A . n A 1 33 LYS 33 38 38 LYS LYS A . n A 1 34 ASP 34 39 39 ASP ASP A . n A 1 35 ARG 35 40 40 ARG ARG A . n A 1 36 ILE 36 41 41 ILE ILE A . n A 1 37 ARG 37 42 42 ARG ARG A . n A 1 38 GLU 38 43 43 GLU GLU A . n A 1 39 ALA 39 44 44 ALA ALA A . n A 1 40 GLU 40 45 45 GLU GLU A . n A 1 41 TYR 41 46 46 TYR TYR A . n A 1 42 GLU 42 47 47 GLU GLU A . n A 1 43 PRO 43 48 48 PRO PRO A . n A 1 44 ILE 44 49 49 ILE ILE A . n A 1 45 ILE 45 50 50 ILE ILE A . n A 1 46 ASP 46 51 51 ASP ASP A . n A 1 47 ILE 47 52 52 ILE ILE A . n A 1 48 ALA 48 53 53 ALA ALA A . n A 1 49 ASP 49 54 54 ASP ASP A . n A 1 50 GLN 50 55 55 GLN GLN A . n A 1 51 TYR 51 56 56 TYR TYR A . n A 1 52 MET 52 57 57 MET MET A . n A 1 53 VAL 53 58 58 VAL VAL A . n A 1 54 THR 54 59 59 THR THR A . n A 1 55 GLU 55 60 60 GLU GLU A . n A 1 56 ASP 56 61 61 ASP ASP A . n A 1 57 PRO 57 62 62 PRO PRO A . n A 1 58 PHE 58 63 63 PHE PHE A . n A 1 59 ARG 59 64 64 ARG ARG A . n A 1 60 GLY 60 65 65 GLY GLY A . n A 1 61 PRO 61 66 66 PRO PRO A . n A 1 62 GLY 62 67 67 GLY GLY A . n A 1 63 LYS 63 68 68 LYS LYS A . n A 1 64 ASN 64 69 69 ASN ASN A . n A 1 65 VAL 65 70 70 VAL VAL A . n A 1 66 ARG 66 71 71 ARG ARG A . n A 1 67 ILE 67 72 72 ILE ILE A . n A 1 68 THR 68 73 73 THR THR A . n A 1 69 LEU 69 74 74 LEU LEU A . n A 1 70 PHE 70 75 75 PHE PHE A . n A 1 71 LYS 71 76 76 LYS LYS A . n A 1 72 GLU 72 77 77 GLU GLU A . n A 1 73 ILE 73 78 78 ILE ILE A . n A 1 74 ARG 74 79 79 ARG ARG A . n A 1 75 ARG 75 80 80 ARG ARG A . n A 1 76 VAL 76 81 81 VAL VAL A . n A 1 77 HIS 77 82 82 HIS HIS A . n A 1 78 PRO 78 83 83 PRO PRO A . n A 1 79 ASP 79 84 84 ASP ASP A . n A 1 80 THR 80 85 85 THR THR A . n A 1 81 MET 81 86 86 MET MET A . n A 1 82 LYS 82 87 87 LYS LYS A . n A 1 83 LEU 83 88 88 LEU LEU A . n A 1 84 VAL 84 89 89 VAL VAL A . n A 1 85 CYS 85 90 90 CYS CYS A . n A 1 86 ASN 86 91 91 ASN ASN A . n A 1 87 TRP 87 92 92 TRP TRP A . n A 1 88 SER 88 93 93 SER SER A . n A 1 89 GLY 89 94 94 GLY GLY A . n A 1 90 LYS 90 95 95 LYS LYS A . n A 1 91 GLU 91 96 96 GLU GLU A . n A 1 92 PHE 92 97 97 PHE PHE A . n A 1 93 LEU 93 98 98 LEU LEU A . n A 1 94 ARG 94 99 99 ARG ARG A . n A 1 95 GLU 95 100 100 GLU GLU A . n A 1 96 THR 96 101 101 THR THR A . n A 1 97 TRP 97 102 102 TRP TRP A . n A 1 98 THR 98 103 103 THR THR A . n A 1 99 ARG 99 104 104 ARG ARG A . n A 1 100 PHE 100 105 105 PHE PHE A . n A 1 101 ILE 101 106 106 ILE ILE A . n A 1 102 SER 102 107 107 SER SER A . n A 1 103 GLU 103 108 108 GLU GLU A . n A 1 104 GLU 104 109 109 GLU GLU A . n A 1 105 PHE 105 110 110 PHE PHE A . n A 1 106 PRO 106 111 111 PRO PRO A . n A 1 107 ILE 107 112 112 ILE ILE A . n A 1 108 THR 108 113 113 THR THR A . n A 1 109 THR 109 114 114 THR THR A . n A 1 110 ASP 110 115 115 ASP ASP A . n A 1 111 GLN 111 116 116 GLN GLN A . n A 1 112 GLU 112 117 117 GLU GLU A . n A 1 113 ILE 113 118 118 ILE ILE A . n A 1 114 MET 114 119 119 MET MET A . n A 1 115 ASP 115 120 120 ASP ASP A . n A 1 116 LEU 116 121 121 LEU LEU A . n A 1 117 TRP 117 122 122 TRP TRP A . n A 1 118 PHE 118 123 123 PHE PHE A . n A 1 119 GLU 119 124 124 GLU GLU A . n A 1 120 LEU 120 125 125 LEU LEU A . n A 1 121 GLN 121 126 126 GLN GLN A . n A 1 122 LEU 122 127 127 LEU LEU A . n A 1 123 ARG 123 128 128 ARG ARG A . n A 1 124 PRO 124 129 129 PRO PRO A . n A 1 125 MET 125 130 130 MET MET A . n A 1 126 HIS 126 131 131 HIS HIS A . n A 1 127 PRO 127 132 132 PRO PRO A . n A 1 128 ASN 128 133 133 ASN ASN A . n A 1 129 ARG 129 134 134 ARG ARG A . n A 1 130 CYS 130 135 135 CYS CYS A . n A 1 131 TYR 131 136 136 TYR TYR A . n A 1 132 LYS 132 137 137 LYS LYS A . n A 1 133 PHE 133 138 138 PHE PHE A . n A 1 134 THR 134 139 139 THR THR A . n A 1 135 MET 135 140 140 MET MET A . n A 1 136 GLN 136 141 141 GLN GLN A . n A 1 137 TYR 137 142 142 TYR TYR A . n A 1 138 ALA 138 143 143 ALA ALA A . n A 1 139 LEU 139 144 144 LEU LEU A . n A 1 140 GLY 140 145 145 GLY GLY A . n A 1 141 ALA 141 146 146 ALA ALA A . n A 1 142 HIS 142 147 147 HIS HIS A . n A 1 143 PRO 143 148 148 PRO PRO A . n A 1 144 ASP 144 149 149 ASP ASP A . n A 1 145 TYR 145 150 150 TYR TYR A . n A 1 146 VAL 146 151 151 VAL VAL A . n A 1 147 ALA 147 152 152 ALA ALA A . n A 1 148 HIS 148 153 153 HIS HIS A . n A 1 149 ASP 149 154 154 ASP ASP A . n A 1 150 VAL 150 155 155 VAL VAL A . n A 1 151 ILE 151 156 156 ILE ILE A . n A 1 152 ARG 152 157 157 ARG ARG A . n A 1 153 GLN 153 158 158 GLN GLN A . n A 1 154 GLN 154 159 159 GLN GLN A . n A 1 155 ASP 155 160 160 ASP ASP A . n A 1 156 PRO 156 161 161 PRO PRO A . n A 1 157 TYR 157 162 162 TYR TYR A . n A 1 158 TYR 158 163 163 TYR TYR A . n A 1 159 VAL 159 164 164 VAL VAL A . n A 1 160 GLY 160 165 165 GLY GLY A . n A 1 161 PRO 161 166 166 PRO PRO A . n A 1 162 ASN 162 167 167 ASN ASN A . n A 1 163 ASN 163 168 168 ASN ASN A . n A 1 164 ILE 164 169 169 ILE ILE A . n A 1 165 GLU 165 170 170 GLU GLU A . n A 1 166 ARG 166 171 171 ARG ARG A . n A 1 167 ILE 167 172 172 ILE ILE A . n A 1 168 ASN 168 173 173 ASN ASN A . n A 1 169 LEU 169 174 174 LEU LEU A . n A 1 170 SER 170 175 175 SER SER A . n A 1 171 LYS 171 176 176 LYS LYS A . n A 1 172 LYS 172 177 177 LYS LYS A . n A 1 173 GLY 173 178 178 GLY GLY A . n A 1 174 PHE 174 179 179 PHE PHE A . n A 1 175 ALA 175 180 180 ALA ALA A . n A 1 176 PHE 176 181 181 PHE PHE A . n A 1 177 PRO 177 182 182 PRO PRO A . n A 1 178 LEU 178 183 183 LEU LEU A . n A 1 179 THR 179 184 184 THR THR A . n A 1 180 CYS 180 185 185 CYS CYS A . n A 1 181 LEU 181 186 186 LEU LEU A . n A 1 182 GLN 182 187 187 GLN GLN A . n A 1 183 SER 183 188 188 SER SER A . n A 1 184 VAL 184 189 189 VAL VAL A . n A 1 185 TYR 185 190 190 TYR TYR A . n A 1 186 ASN 186 191 191 ASN ASN A . n A 1 187 ASP 187 192 192 ASP ASP A . n A 1 188 ASN 188 193 193 ASN ASN A . n A 1 189 PHE 189 194 194 PHE PHE A . n A 1 190 GLU 190 195 195 GLU GLU A . n A 1 191 ARG 191 196 196 ARG ARG A . n A 1 192 PHE 192 197 197 PHE PHE A . n A 1 193 PHE 193 198 198 PHE PHE A . n A 1 194 ASP 194 199 199 ASP ASP A . n A 1 195 ASP 195 200 200 ASP ASP A . n A 1 196 VAL 196 201 201 VAL VAL A . n A 1 197 LEU 197 202 202 LEU LEU A . n A 1 198 TRP 198 203 203 TRP TRP A . n A 1 199 PRO 199 204 204 PRO PRO A . n A 1 200 TYR 200 205 205 TYR TYR A . n A 1 201 PHE 201 206 206 PHE PHE A . n A 1 202 TYR 202 207 207 TYR TYR A . n A 1 203 ARG 203 208 208 ARG ARG A . n A 1 204 PRO 204 209 209 PRO PRO A . n A 1 205 LEU 205 210 210 LEU LEU A . n A 1 206 VAL 206 211 211 VAL VAL A . n A 1 207 TYR 207 212 212 TYR TYR A . n A 1 208 VAL 208 213 213 VAL VAL A . n A 1 209 GLY 209 214 214 GLY GLY A . n A 1 210 THR 210 215 215 THR THR A . n A 1 211 THR 211 216 216 THR THR A . n A 1 212 SER 212 217 217 SER SER A . n A 1 213 ALA 213 218 218 ALA ALA A . n A 1 214 GLU 214 219 219 GLU GLU A . n A 1 215 ILE 215 220 220 ILE ILE A . n A 1 216 GLU 216 221 221 GLU GLU A . n A 1 217 GLU 217 222 222 GLU GLU A . n A 1 218 ILE 218 223 223 ILE ILE A . n A 1 219 MET 219 224 224 MET MET A . n A 1 220 ILE 220 225 225 ILE ILE A . n A 1 221 GLU 221 226 226 GLU GLU A . n A 1 222 VAL 222 227 227 VAL VAL A . n A 1 223 SER 223 228 228 SER SER A . n A 1 224 LEU 224 229 229 LEU LEU A . n A 1 225 LEU 225 230 230 LEU LEU A . n A 1 226 PHE 226 231 231 PHE PHE A . n A 1 227 LYS 227 232 232 LYS LYS A . n A 1 228 ILE 228 233 233 ILE ILE A . n A 1 229 LYS 229 234 234 LYS LYS A . n A 1 230 GLU 230 235 235 GLU GLU A . n A 1 231 PHE 231 236 236 PHE PHE A . n A 1 232 ALA 232 237 237 ALA ALA A . n A 1 233 PRO 233 238 238 PRO PRO A . n A 1 234 ASP 234 239 239 ASP ASP A . n A 1 235 VAL 235 240 240 VAL VAL A . n A 1 236 PRO 236 241 241 PRO PRO A . n A 1 237 LEU 237 242 242 LEU LEU A . n A 1 238 PHE 238 243 243 PHE PHE A . n A 1 239 THR 239 244 244 THR THR A . n A 1 240 GLY 240 245 245 GLY GLY A . n A 1 241 PRO 241 246 246 PRO PRO A . n A 1 242 ALA 242 247 247 ALA ALA A . n A 1 243 TYR 243 248 248 TYR TYR A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 301 5 HOH HOH A . B 2 HOH 2 302 16 HOH HOH A . B 2 HOH 3 303 53 HOH HOH A . B 2 HOH 4 304 6 HOH HOH A . B 2 HOH 5 305 2 HOH HOH A . B 2 HOH 6 306 43 HOH HOH A . B 2 HOH 7 307 51 HOH HOH A . B 2 HOH 8 308 29 HOH HOH A . B 2 HOH 9 309 31 HOH HOH A . B 2 HOH 10 310 78 HOH HOH A . B 2 HOH 11 311 77 HOH HOH A . B 2 HOH 12 312 71 HOH HOH A . B 2 HOH 13 313 44 HOH HOH A . B 2 HOH 14 314 7 HOH HOH A . B 2 HOH 15 315 11 HOH HOH A . B 2 HOH 16 316 24 HOH HOH A . B 2 HOH 17 317 40 HOH HOH A . B 2 HOH 18 318 33 HOH HOH A . B 2 HOH 19 319 45 HOH HOH A . B 2 HOH 20 320 36 HOH HOH A . B 2 HOH 21 321 13 HOH HOH A . B 2 HOH 22 322 25 HOH HOH A . B 2 HOH 23 323 49 HOH HOH A . B 2 HOH 24 324 19 HOH HOH A . B 2 HOH 25 325 8 HOH HOH A . B 2 HOH 26 326 10 HOH HOH A . B 2 HOH 27 327 50 HOH HOH A . B 2 HOH 28 328 35 HOH HOH A . B 2 HOH 29 329 32 HOH HOH A . B 2 HOH 30 330 12 HOH HOH A . B 2 HOH 31 331 21 HOH HOH A . B 2 HOH 32 332 23 HOH HOH A . B 2 HOH 33 333 3 HOH HOH A . B 2 HOH 34 334 66 HOH HOH A . B 2 HOH 35 335 59 HOH HOH A . B 2 HOH 36 336 17 HOH HOH A . B 2 HOH 37 337 47 HOH HOH A . B 2 HOH 38 338 27 HOH HOH A . B 2 HOH 39 339 4 HOH HOH A . B 2 HOH 40 340 67 HOH HOH A . B 2 HOH 41 341 63 HOH HOH A . B 2 HOH 42 342 20 HOH HOH A . B 2 HOH 43 343 14 HOH HOH A . B 2 HOH 44 344 55 HOH HOH A . B 2 HOH 45 345 62 HOH HOH A . B 2 HOH 46 346 9 HOH HOH A . B 2 HOH 47 347 57 HOH HOH A . B 2 HOH 48 348 26 HOH HOH A . B 2 HOH 49 349 48 HOH HOH A . B 2 HOH 50 350 37 HOH HOH A . B 2 HOH 51 351 65 HOH HOH A . B 2 HOH 52 352 38 HOH HOH A . B 2 HOH 53 353 18 HOH HOH A . B 2 HOH 54 354 60 HOH HOH A . B 2 HOH 55 355 34 HOH HOH A . B 2 HOH 56 356 52 HOH HOH A . B 2 HOH 57 357 15 HOH HOH A . B 2 HOH 58 358 74 HOH HOH A . B 2 HOH 59 359 56 HOH HOH A . B 2 HOH 60 360 72 HOH HOH A . B 2 HOH 61 361 75 HOH HOH A . B 2 HOH 62 362 70 HOH HOH A . B 2 HOH 63 363 73 HOH HOH A . B 2 HOH 64 364 22 HOH HOH A . B 2 HOH 65 365 41 HOH HOH A . B 2 HOH 66 366 68 HOH HOH A . B 2 HOH 67 367 61 HOH HOH A . B 2 HOH 68 368 76 HOH HOH A . B 2 HOH 69 369 28 HOH HOH A . B 2 HOH 70 370 39 HOH HOH A . B 2 HOH 71 371 1 HOH HOH A . B 2 HOH 72 372 46 HOH HOH A . B 2 HOH 73 373 69 HOH HOH A . B 2 HOH 74 374 30 HOH HOH A . B 2 HOH 75 375 64 HOH HOH A . B 2 HOH 76 376 80 HOH HOH A . B 2 HOH 77 377 58 HOH HOH A . B 2 HOH 78 378 42 HOH HOH A . B 2 HOH 79 379 79 HOH HOH A . B 2 HOH 80 380 54 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A LYS 176 ? CG ? A LYS 171 CG 2 1 Y 0 A LYS 176 ? CD ? A LYS 171 CD 3 1 Y 0 A LYS 176 ? CE ? A LYS 171 CE 4 1 Y 0 A LYS 176 ? NZ ? A LYS 171 NZ 5 1 Y 0 A LYS 177 ? CB ? A LYS 172 CB 6 1 Y 0 A LYS 177 ? CG ? A LYS 172 CG 7 1 Y 0 A LYS 177 ? CD ? A LYS 172 CD 8 1 Y 0 A LYS 177 ? CE ? A LYS 172 CE 9 1 Y 0 A LYS 177 ? NZ ? A LYS 172 NZ # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.11_2567 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? CrystFEL ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? CrystFEL ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5MND _cell.details ? _cell.formula_units_Z ? _cell.length_a 103.400 _cell.length_a_esd ? _cell.length_b 103.400 _cell.length_b_esd ? _cell.length_c 103.400 _cell.length_c_esd ? _cell.volume 1105507.304 _cell.volume_esd ? _cell.Z_PDB 24 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MND _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall 'I 2 2 3' _symmetry.space_group_name_H-M 'I 2 3' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5MND _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.60 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 23.14 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'IN CELL' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;We used Madex HP (Certisusa). Madex HP contains about 1E13 virus occlusion bodies (OB) per liter and the OBs were purified from the aqueous suspension by applying iterative washing and centrifugation cycles. The pellet was then re-suspended in ultra-pure water at pH7. After 3h of incubation at room temperature the supernatant, containing the almost pure OBs, was removed from the pellet and subjected to filtration steps through a sequence of stainless steel filters with decreasing pore sizes (20 um, 10 um, 5 um, 2 um, 0.5 m; all IDEX). To increase the concentration of CpGV to the desired 1E11 particles/ml for injection at LCLS, the suspension was subjected to centrifugation at 21,000 g, the supernatant was removed, and the pellet re-suspended. Size distribution and particle concentration was estimated using a Nanosight LM14 instrument (Malvern). ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 293.15 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment Y # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'CS-PAD CXI-2' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-06-26 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5498 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'FREE ELECTRON LASER' _diffrn_source.target ? _diffrn_source.type 'SLAC LCLS BEAMLINE CXI' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.5498 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline CXI _diffrn_source.pdbx_synchrotron_site 'SLAC LCLS' # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5MND _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.55 _reflns.d_resolution_low 32.7 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 6052 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.2 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 1755.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 35.21 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.99 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.56 _reflns_shell.d_res_low 2.651 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 8.57 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 96.96 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 351.9 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.965 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 21.0136272722 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5MND _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.56 _refine.ls_d_res_low 32.70 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 6052 _refine.ls_number_reflns_R_free 601 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.2293818659 _refine.ls_percent_reflns_R_free 9.93060145406 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.160 _refine.ls_R_factor_R_free 0.207 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.154 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.385 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5G0Z _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details 'Rfree from 5G0Z' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 20.3617872178 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.331465050494 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2031 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 80 _refine_hist.number_atoms_total 2111 _refine_hist.d_res_high 2.56 _refine_hist.d_res_low 32.70 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.00270642187068 ? 2102 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.542254716655 ? 2854 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0449375355728 ? 299 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.00292430002288 ? 372 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 15.2507022006 ? 1259 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.56 2.82 . . 142 1329 97.1598414795 . . . 0.303 . 0.206 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.82 3.22 . . 158 1337 100.0 . . . 0.221 . 0.164 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.22 4.06 . . 161 1360 100.0 . . . 0.181 . 0.139 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.06 32.70 . . 140 1425 99.8086734694 . . . 0.182 . 0.141 . . . . . . . . . . # _struct.entry_id 5MND _struct.title 'SFX structure of Cydia pomonella granulovirus using a double flow-focusing nozzle' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5MND _struct_keywords.text 'SFX, granulovirus, in vivo crystals, nanocrystals, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GRAN_GVCPM _struct_ref.pdbx_db_accession P87577 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SLRYSRHDGTSCVIDNHHLKSLGAVLNDVRRKKDRIREAEYEPIIDIADQYMVTEDPFRGPGKNVRITLFKEIRRVHPDT MKLVCNWSGKEFLRETWTRFISEEFPITTDQEIMDLWFELQLRPMHPNRCYKFTMQYALGAHPDYVAHDVIRQQDPYYVG PNNIERINLSKKGFAFPLTCLQSVYNDNFERFFDDVLWPYFYRPLVYVGTTSAEIEEIMIEVSLLFKIKEFAPDVPLFTG PAY ; _struct_ref.pdbx_align_begin 6 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5MND _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 243 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P87577 _struct_ref_seq.db_align_beg 6 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 248 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 6 _struct_ref_seq.pdbx_auth_seq_align_end 248 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 51470 ? 1 MORE -339 ? 1 'SSA (A^2)' 151650 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_575 -x,-y+2,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 206.8000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_559 -x,y,-z+4 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 413.6000000000 4 'crystal symmetry operation' 4_579 x,-y+2,-z+4 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 206.8000000000 0.0000000000 0.0000000000 -1.0000000000 413.6000000000 5 'crystal symmetry operation' 5_366 z-2,x+1,y+1 0.0000000000 0.0000000000 1.0000000000 -206.8000000000 1.0000000000 0.0000000000 0.0000000000 103.4000000000 0.0000000000 1.0000000000 0.0000000000 103.4000000000 6 'crystal symmetry operation' 6_368 z-2,-x+1,-y+3 0.0000000000 0.0000000000 1.0000000000 -206.8000000000 -1.0000000000 0.0000000000 0.0000000000 103.4000000000 0.0000000000 -1.0000000000 0.0000000000 310.2000000000 7 'crystal symmetry operation' 7_766 -z+2,-x+1,y+1 0.0000000000 0.0000000000 -1.0000000000 206.8000000000 -1.0000000000 0.0000000000 0.0000000000 103.4000000000 0.0000000000 1.0000000000 0.0000000000 103.4000000000 8 'crystal symmetry operation' 8_768 -z+2,x+1,-y+3 0.0000000000 0.0000000000 -1.0000000000 206.8000000000 1.0000000000 0.0000000000 0.0000000000 103.4000000000 0.0000000000 -1.0000000000 0.0000000000 310.2000000000 9 'crystal symmetry operation' 9_447 y-1,z-1,x+2 0.0000000000 1.0000000000 0.0000000000 -103.4000000000 0.0000000000 0.0000000000 1.0000000000 -103.4000000000 1.0000000000 0.0000000000 0.0000000000 206.8000000000 10 'crystal symmetry operation' 10_647 -y+1,z-1,-x+2 0.0000000000 -1.0000000000 0.0000000000 103.4000000000 0.0000000000 0.0000000000 1.0000000000 -103.4000000000 -1.0000000000 0.0000000000 0.0000000000 206.8000000000 11 'crystal symmetry operation' 11_487 y-1,-z+3,-x+2 0.0000000000 1.0000000000 0.0000000000 -103.4000000000 0.0000000000 0.0000000000 -1.0000000000 310.2000000000 -1.0000000000 0.0000000000 0.0000000000 206.8000000000 12 'crystal symmetry operation' 12_687 -y+1,-z+3,x+2 0.0000000000 -1.0000000000 0.0000000000 103.4000000000 0.0000000000 0.0000000000 -1.0000000000 310.2000000000 1.0000000000 0.0000000000 0.0000000000 206.8000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 21 ? ASP A 49 ? SER A 26 ASP A 54 1 ? 29 HELX_P HELX_P2 AA2 SER A 88 ? PHE A 105 ? SER A 93 PHE A 110 1 ? 18 HELX_P HELX_P3 AA3 ASN A 188 ? VAL A 196 ? ASN A 193 VAL A 201 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 130 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 130 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 135 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 135 _struct_conn.ptnr2_symmetry 3_559 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.041 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PHE 105 A . ? PHE 110 A PRO 106 A ? PRO 111 A 1 1.88 2 GLY 240 A . ? GLY 245 A PRO 241 A ? PRO 246 A 1 -4.24 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 4 ? AA3 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 11 ? ILE A 14 ? SER A 16 ILE A 19 AA1 2 HIS A 17 ? LYS A 20 ? HIS A 22 LYS A 25 AA2 1 LYS A 63 ? VAL A 76 ? LYS A 68 VAL A 81 AA2 2 GLU A 216 ? PHE A 231 ? GLU A 221 PHE A 236 AA2 3 ASP A 110 ? PRO A 124 ? ASP A 115 PRO A 129 AA2 4 ILE A 164 ? ASN A 168 ? ILE A 169 ASN A 173 AA3 1 VAL A 150 ? ARG A 152 ? VAL A 155 ARG A 157 AA3 2 THR A 80 ? LEU A 83 ? THR A 85 LEU A 88 AA3 3 TYR A 202 ? THR A 210 ? TYR A 207 THR A 215 AA3 4 PHE A 133 ? GLY A 140 ? PHE A 138 GLY A 145 AA3 5 TYR A 157 ? TYR A 158 ? TYR A 162 TYR A 163 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N CYS A 12 ? N CYS A 17 O LEU A 19 ? O LEU A 24 AA2 1 2 N ARG A 74 ? N ARG A 79 O ILE A 218 ? O ILE A 223 AA2 2 3 O PHE A 231 ? O PHE A 236 N ASP A 110 ? N ASP A 115 AA2 3 4 N LEU A 120 ? N LEU A 125 O GLU A 165 ? O GLU A 170 AA3 1 2 O ILE A 151 ? O ILE A 156 N MET A 81 ? N MET A 86 AA3 2 3 N LYS A 82 ? N LYS A 87 O VAL A 208 ? O VAL A 213 AA3 3 4 O TYR A 207 ? O TYR A 212 N GLN A 136 ? N GLN A 141 AA3 4 5 N MET A 135 ? N MET A 140 O TYR A 157 ? O TYR A 162 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A GLN 158 ? ? O A HOH 301 ? ? 1.88 2 1 O A ASP 239 ? ? O A HOH 302 ? ? 1.96 3 1 OD2 A ASP 192 ? ? O A HOH 303 ? ? 2.10 4 1 OE1 A GLU 235 ? ? O A HOH 304 ? ? 2.17 5 1 O A LEU 183 ? ? O A HOH 305 ? ? 2.17 6 1 O A LEU 174 ? ? O A HOH 306 ? ? 2.19 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 366 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 367 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 21_436 _pdbx_validate_symm_contact.dist 2.13 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 12 ? ? -107.11 44.25 2 1 ASN A 21 ? ? 69.80 -11.08 3 1 CYS A 185 ? ? -125.24 -157.18 4 1 TRP A 203 ? ? -116.44 72.49 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 376 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 z,x,y 3 y,z,x 4 -y,-z,x 5 z,-x,-y 6 -y,z,-x 7 -z,-x,y 8 -z,x,-y 9 y,-z,-x 10 x,-y,-z 11 -x,y,-z 12 -x,-y,z 13 x+1/2,y+1/2,z+1/2 14 z+1/2,x+1/2,y+1/2 15 y+1/2,z+1/2,x+1/2 16 -y+1/2,-z+1/2,x+1/2 17 z+1/2,-x+1/2,-y+1/2 18 -y+1/2,z+1/2,-x+1/2 19 -z+1/2,-x+1/2,y+1/2 20 -z+1/2,x+1/2,-y+1/2 21 y+1/2,-z+1/2,-x+1/2 22 x+1/2,-y+1/2,-z+1/2 23 -x+1/2,y+1/2,-z+1/2 24 -x+1/2,-y+1/2,z+1/2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal BMBF Germany 05E13GU1 1 BMBF Germany 05K13GUK 2 BMBF Germany 05K2012 3 'National Science Foundation (NSF, United States)' 'United States' '1231306).' 4 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5G0Z _pdbx_initial_refinement_model.details ? # _space_group.name_H-M_alt 'I 2 3' _space_group.name_Hall 'I 2 2 3' _space_group.IT_number 197 _space_group.crystal_system cubic _space_group.id 1 # _atom_sites.entry_id 5MND _atom_sites.fract_transf_matrix[1][1] 0.009671 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009671 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009671 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 25.62398 1.50364 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? 0.51345 0.48472 24.73122 6.32584 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 19.97189 1.75589 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 15.80542 1.70748 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 1.23737 29.19336 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_