HEADER CELL CYCLE 12-JAN-17 5MU3 TITLE CRYSTAL STRUCTURE OF CTF19-MCM21 KINETOCHORE ASSEMBLY BOUND WITH TITLE 2 CTF19-MCM21 BINDING MOTIF OF CENTRAL KINETOCHORE SUBUNIT OKP1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CENTRAL KINETOCHORE SUBUNIT MCM21; COMPND 3 CHAIN: A, D; COMPND 4 SYNONYM: MINICHROMOSOME MAINTENANCE PROTEIN 21; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CENTRAL KINETOCHORE SUBUNIT CTF19; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: CHROMOSOME TRANSMISSION FIDELITY PROTEIN 19; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: CENTRAL KINETOCHORE SUBUNIT OKP1; COMPND 13 CHAIN: C, F; COMPND 14 SYNONYM: OKP1; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: CENTRAL KINETOCHORE SUBUNIT CTF19; COMPND 18 CHAIN: E; COMPND 19 SYNONYM: CHROMOSOME TRANSMISSION FIDELITY PROTEIN 19; COMPND 20 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLUYVEROMYCES LACTIS NRRL Y-1140; SOURCE 3 ORGANISM_TAXID: 284590; SOURCE 4 GENE: MCM21, KLLA0B10142G; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: ROSETTA PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET3ATR; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: KLUYVEROMYCES LACTIS NRRL Y-1140; SOURCE 12 ORGANISM_TAXID: 284590; SOURCE 13 GENE: CTF19, KLLA0D07612G; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_VARIANT: ROSETTA PLYSS; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PET3ATR; SOURCE 19 MOL_ID: 3; SOURCE 20 ORGANISM_SCIENTIFIC: KLUYVEROMYCES LACTIS NRRL Y-1140; SOURCE 21 ORGANISM_TAXID: 284590; SOURCE 22 GENE: KLLA0_F15136G; SOURCE 23 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 24 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 25 EXPRESSION_SYSTEM_VARIANT: ROSETTA PLYSS; SOURCE 26 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 27 EXPRESSION_SYSTEM_PLASMID: PET3ATR; SOURCE 28 MOL_ID: 4; SOURCE 29 ORGANISM_SCIENTIFIC: KLUYVEROMYCES LACTIS NRRL Y-1140; SOURCE 30 ORGANISM_TAXID: 284590; SOURCE 31 GENE: CTF19, KLLA0D07612G; SOURCE 32 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 33 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 34 EXPRESSION_SYSTEM_VARIANT: ROSETTA PLYSS; SOURCE 35 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 36 EXPRESSION_SYSTEM_PLASMID: PET3ATR KEYWDS CELL CYCLE, CHROMOSOME SEGREGATION, CENTROMERE, KINETOCHORE, RWD KEYWDS 2 DOMAIN EXPDTA X-RAY DIFFRACTION AUTHOR F.SCHMITZBERGER REVDAT 4 17-JAN-24 5MU3 1 REMARK REVDAT 3 21-NOV-18 5MU3 1 LINK REVDAT 2 13-DEC-17 5MU3 1 JRNL REVDAT 1 01-NOV-17 5MU3 0 JRNL AUTH F.SCHMITZBERGER,M.M.RICHTER,Y.GORDIYENKO,C.V.ROBINSON, JRNL AUTH 2 M.DADLEZ,S.WESTERMANN JRNL TITL MOLECULAR BASIS FOR INNER KINETOCHORE CONFIGURATION THROUGH JRNL TITL 2 RWD DOMAIN-PEPTIDE INTERACTIONS. JRNL REF EMBO J. V. 36 3458 2017 JRNL REFN ESSN 1460-2075 JRNL PMID 29046335 JRNL DOI 10.15252/EMBJ.201796636 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH F.SCHMITZBERGER,S.C.HARRISON REMARK 1 TITL RWD DOMAIN: A RECURRING MODULE IN KINETOCHORE ARCHITECTURE REMARK 1 TITL 2 SHOWN BY A CTF19-MCM21 COMPLEX STRUCTURE. REMARK 1 REF EMBO REP. V. 13 216 2012 REMARK 1 REFN ESSN 1469-3178 REMARK 1 PMID 22322944 REMARK 1 DOI 10.1038/EMBOR.2012.1 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 80.06 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.040 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 71210 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.420 REMARK 3 FREE R VALUE TEST SET COUNT : 3247 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 80.1213 - 5.9714 0.97 5673 141 0.2379 0.2850 REMARK 3 2 5.9714 - 4.7398 0.99 5734 142 0.1845 0.1821 REMARK 3 3 4.7398 - 4.1407 0.99 5763 139 0.1522 0.1708 REMARK 3 4 4.1407 - 3.7621 0.99 5727 137 0.1630 0.1796 REMARK 3 5 3.7621 - 3.4925 0.99 5786 138 0.1755 0.2116 REMARK 3 6 3.4925 - 3.2866 0.99 5764 143 0.1958 0.2593 REMARK 3 7 3.2866 - 3.1220 0.99 5779 144 0.2166 0.2601 REMARK 3 8 3.1220 - 2.9860 0.99 5794 146 0.2113 0.2590 REMARK 3 9 2.9860 - 2.8711 1.00 5753 140 0.2214 0.2374 REMARK 3 10 2.8711 - 2.7720 1.00 5791 149 0.2334 0.3049 REMARK 3 11 2.7720 - 2.6853 1.00 5812 142 0.2493 0.2743 REMARK 3 12 2.6853 - 2.6086 1.00 5747 139 0.2583 0.3013 REMARK 3 13 2.6086 - 2.5399 1.00 5834 142 0.2750 0.3104 REMARK 3 14 2.5399 - 2.4779 1.00 5796 144 0.2960 0.3273 REMARK 3 15 2.4779 - 2.4216 1.00 5757 141 0.3169 0.3498 REMARK 3 16 2.4216 - 2.3700 1.00 5820 147 0.3243 0.3415 REMARK 3 17 2.3700 - 2.3226 1.00 5750 141 0.3345 0.3374 REMARK 3 18 2.3226 - 2.2788 0.99 5728 145 0.3540 0.3909 REMARK 3 19 2.2788 - 2.2381 0.99 5756 141 0.3830 0.3330 REMARK 3 20 2.2381 - 2.2002 0.98 5622 148 0.4010 0.3994 REMARK 3 21 2.2002 - 2.1647 0.96 5582 136 0.4305 0.4035 REMARK 3 22 2.1647 - 2.1314 0.91 5289 141 0.4509 0.4637 REMARK 3 23 2.1314 - 2.1000 0.83 4828 121 0.4758 0.4395 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.420 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.410 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 6244 REMARK 3 ANGLE : 0.456 8437 REMARK 3 CHIRALITY : 0.041 961 REMARK 3 PLANARITY : 0.002 1066 REMARK 3 DIHEDRAL : 8.659 3778 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: MAXIMUM LIKELIHOOD TARGET WITH TWO-FOLD REMARK 3 NON-CRYSTALLOGRAPHIC SYMMETRY RESTRAINTS REMARK 4 REMARK 4 5MU3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1200003000. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : CRYOGENICALLY-COOLED SINGLE REMARK 200 CRYSTAL SI(220) SIDE BOUNCE REMARK 200 OPTICS : KIRKPATRICK-BAEZ MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS JANUARY 2014 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.1.27 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71441 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 122.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.09800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.40 REMARK 200 R MERGE FOR SHELL (I) : 3.44600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.6 REMARK 200 STARTING MODEL: 3ZXU REMARK 200 REMARK 200 REMARK: CUBIC REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 35 % (V/V) GLYCEROL ETHOXYLATE 200 MM REMARK 280 LI-CITRATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.73800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.49100 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.73800 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 61.49100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -3 REMARK 465 ASN A -2 REMARK 465 ILE A 291 REMARK 465 ILE A 292 REMARK 465 MET A 293 REMARK 465 MET B 106 REMARK 465 ILE B 270 REMARK 465 MET C 294 REMARK 465 LYS C 295 REMARK 465 THR C 296 REMARK 465 MET C 297 REMARK 465 HIS C 298 REMARK 465 PRO C 299 REMARK 465 SER C 300 REMARK 465 LEU C 301 REMARK 465 SER C 302 REMARK 465 VAL C 303 REMARK 465 ALA C 304 REMARK 465 LEU C 305 REMARK 465 SER C 306 REMARK 465 ASN C 307 REMARK 465 THR C 308 REMARK 465 PHE C 309 REMARK 465 GLY C 310 REMARK 465 LEU C 311 REMARK 465 ILE C 312 REMARK 465 LYS C 313 REMARK 465 ASP C 314 REMARK 465 ASP C 315 REMARK 465 LYS C 316 REMARK 465 MET C 317 REMARK 465 SER C 318 REMARK 465 SER C 343 REMARK 465 GLU C 344 REMARK 465 LYS C 345 REMARK 465 GLU C 346 REMARK 465 GLU C 347 REMARK 465 ASN C 348 REMARK 465 SER C 349 REMARK 465 LEU C 350 REMARK 465 ASN C 351 REMARK 465 GLY C 352 REMARK 465 LEU C 353 REMARK 465 THR C 354 REMARK 465 ASN C 355 REMARK 465 ALA C 356 REMARK 465 MET C 357 REMARK 465 ASP C 358 REMARK 465 ASN C 359 REMARK 465 ASN C 360 REMARK 465 SER D -3 REMARK 465 ASN D -2 REMARK 465 ILE D 292 REMARK 465 MET D 293 REMARK 465 ILE E 270 REMARK 465 MET F 294 REMARK 465 LYS F 295 REMARK 465 THR F 296 REMARK 465 MET F 297 REMARK 465 HIS F 298 REMARK 465 PRO F 299 REMARK 465 SER F 300 REMARK 465 LEU F 301 REMARK 465 SER F 302 REMARK 465 VAL F 303 REMARK 465 ALA F 304 REMARK 465 LEU F 305 REMARK 465 SER F 306 REMARK 465 ASN F 307 REMARK 465 THR F 308 REMARK 465 PHE F 309 REMARK 465 GLY F 310 REMARK 465 LEU F 311 REMARK 465 ILE F 312 REMARK 465 LYS F 313 REMARK 465 ASP F 314 REMARK 465 ASP F 315 REMARK 465 LYS F 316 REMARK 465 MET F 317 REMARK 465 SER F 343 REMARK 465 GLU F 344 REMARK 465 LYS F 345 REMARK 465 GLU F 346 REMARK 465 GLU F 347 REMARK 465 ASN F 348 REMARK 465 SER F 349 REMARK 465 LEU F 350 REMARK 465 ASN F 351 REMARK 465 GLY F 352 REMARK 465 LEU F 353 REMARK 465 THR F 354 REMARK 465 ASN F 355 REMARK 465 ALA F 356 REMARK 465 MET F 357 REMARK 465 ASP F 358 REMARK 465 ASN F 359 REMARK 465 ASN F 360 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 204 O HOH B 301 2.08 REMARK 500 O HOH B 341 O HOH B 349 2.12 REMARK 500 O HOH D 338 O HOH D 346 2.15 REMARK 500 OD1 ASP E 129 NH1 ARG E 143 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH1 ARG B 143 OD1 ASP E 129 1565 2.04 REMARK 500 OG SER A 280 OD2 ASP D 130 3755 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 189 19.86 58.23 REMARK 500 THR A 191 -51.73 -132.26 REMARK 500 ASN B 120 -117.21 63.35 REMARK 500 LYS B 128 -140.91 64.66 REMARK 500 SER B 137 -17.19 84.40 REMARK 500 ASN B 148 -133.45 40.51 REMARK 500 ASN B 219 -126.50 58.50 REMARK 500 LYS B 244 -114.30 -114.51 REMARK 500 PHE D 170 -73.65 -108.11 REMARK 500 THR D 191 -52.97 -131.58 REMARK 500 ASN D 228 -98.85 54.02 REMARK 500 ASN E 120 -118.35 62.23 REMARK 500 LYS E 128 -151.20 64.27 REMARK 500 VAL E 146 76.66 -112.28 REMARK 500 ASN E 148 -136.41 40.91 REMARK 500 ASN E 219 -126.51 61.18 REMARK 500 ASN E 230 77.27 -115.68 REMARK 500 LYS E 244 -113.45 -112.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH E 360 DISTANCE = 6.13 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ZXU RELATED DB: PDB DBREF 5MU3 A 108 293 UNP Q6CVQ9 MCM21_KLULA 108 293 DBREF 5MU3 B 107 270 UNP Q6CRN7 CTF19_KLULA 107 270 DBREF 5MU3 C 295 360 UNP Q6CJY0 Q6CJY0_KLULA 295 360 DBREF 5MU3 D 108 293 UNP Q6CVQ9 MCM21_KLULA 108 293 DBREF 5MU3 E 107 270 UNP Q6CRN7 CTF19_KLULA 107 270 DBREF 5MU3 F 295 360 UNP Q6CJY0 Q6CJY0_KLULA 295 360 SEQADV 5MU3 SER A -3 UNP Q6CVQ9 EXPRESSION TAG SEQADV 5MU3 ASN A -2 UNP Q6CVQ9 EXPRESSION TAG SEQADV 5MU3 ALA A -1 UNP Q6CVQ9 EXPRESSION TAG SEQADV 5MU3 MET B 106 UNP Q6CRN7 INITIATING METHIONINE SEQADV 5MU3 MET C 294 UNP Q6CJY0 INITIATING METHIONINE SEQADV 5MU3 SER D -3 UNP Q6CVQ9 EXPRESSION TAG SEQADV 5MU3 ASN D -2 UNP Q6CVQ9 EXPRESSION TAG SEQADV 5MU3 ALA D -1 UNP Q6CVQ9 EXPRESSION TAG SEQADV 5MU3 MET E 106 UNP Q6CRN7 INITIATING METHIONINE SEQADV 5MU3 MET F 294 UNP Q6CJY0 INITIATING METHIONINE SEQRES 1 A 189 SER ASN ALA THR ASP PHE VAL GLN TRP GLU ASN SER VAL SEQRES 2 A 189 ARG LEU ILE GLY VAL SER LEU PHE PRO VAL ASN TYR ASP SEQRES 3 A 189 ASN ILE GLU PHE MET GLY ILE ARG LEU GLU LEU PHE ASP SEQRES 4 A 189 GLU LEU SER LEU LYS TYR ASP PRO PRO PHE TYR VAL ILE SEQRES 5 A 189 LEU LYS PRO SER VAL LYS ARG LEU GLY ILE TRP GLU LEU SEQRES 6 A 189 PHE LYS HIS ASN LEU PRO LYS TYR ILE ASN ILE HIS GLN SEQRES 7 A 189 HIS TRP GLN LEU ILE THR LYS ASP THR ASP THR SER ASP SEQRES 8 A 189 SER ASN ILE MET LYS PHE ALA ASN LEU CYS TYR LYS ASP SEQRES 9 A 189 LEU LEU LYS VAL HIS SER ARG VAL GLN PHE PHE ARG LYS SEQRES 10 A 189 LEU GLU GLY ASN TYR VAL ASN ASP LYS GLN TYR SER LEU SEQRES 11 A 189 LEU HIS ILE ASP ASN MET GLY LEU ASN VAL SER PHE ARG SEQRES 12 A 189 LEU GLY ALA ASP ILE ILE LYS ILE LYS VAL ASP ASP GLY SEQRES 13 A 189 ASP ASP GLU ILE ILE ASP CYS THR PHE ASN GLY GLU LYS SEQRES 14 A 189 ASN ILE SER LEU LEU GLY SER ILE TYR GLY ILE THR ASN SEQRES 15 A 189 ARG PHE GLN SER ILE ILE MET SEQRES 1 B 165 MET ASN ILE GLU GLN ARG LYS LYS TYR LEU ASP ILE THR SEQRES 2 B 165 LEU ASN ASP VAL THR VAL THR CYS GLU LYS ASP MET ILE SEQRES 3 B 165 LEU LEU ARG LYS GLY SER PHE THR ALA SER PHE ARG ILE SEQRES 4 B 165 ALA VAL GLU ASN GLU SER ILE ARG SER MET ALA ILE ASP SEQRES 5 B 165 LEU ASN ALA PHE GLU VAL GLU LEU GLN PRO ILE ILE GLN SEQRES 6 B 165 TYR ALA GLU ASP THR GLN ASN VAL ASN VAL ALA MET MET SEQRES 7 B 165 ALA VAL VAL GLN PHE LEU ARG ILE LYS GLU LEU HIS GLU SEQRES 8 B 165 GLN MET ILE SER LYS ILE VAL GLU ALA SER LYS PHE ILE SEQRES 9 B 165 ARG ALA SER ASN ASN THR ILE THR LEU ASN ASP LEU GLU SEQRES 10 B 165 VAL SER PHE HIS CYS TYR TRP ASN LEU PRO SER PRO TYR SEQRES 11 B 165 PRO GLU THR LEU ILE LEU THR ASN LYS VAL GLN LYS ILE SEQRES 12 B 165 LEU ASP PHE LEU ILE TYR GLN TYR GLY ILE GLN LEU GLY SEQRES 13 B 165 VAL ILE LYS TYR GLY SER THR ILE ILE SEQRES 1 C 67 MET LYS THR MET HIS PRO SER LEU SER VAL ALA LEU SER SEQRES 2 C 67 ASN THR PHE GLY LEU ILE LYS ASP ASP LYS MET SER ASN SEQRES 3 C 67 GLU ILE TYR GLN GLN ASP LYS ILE ASP PHE ASN LEU LYS SEQRES 4 C 67 LEU LYS THR ASP PHE SER LYS PRO LEU ILE SER GLU LYS SEQRES 5 C 67 GLU GLU ASN SER LEU ASN GLY LEU THR ASN ALA MET ASP SEQRES 6 C 67 ASN ASN SEQRES 1 D 189 SER ASN ALA THR ASP PHE VAL GLN TRP GLU ASN SER VAL SEQRES 2 D 189 ARG LEU ILE GLY VAL SER LEU PHE PRO VAL ASN TYR ASP SEQRES 3 D 189 ASN ILE GLU PHE MET GLY ILE ARG LEU GLU LEU PHE ASP SEQRES 4 D 189 GLU LEU SER LEU LYS TYR ASP PRO PRO PHE TYR VAL ILE SEQRES 5 D 189 LEU LYS PRO SER VAL LYS ARG LEU GLY ILE TRP GLU LEU SEQRES 6 D 189 PHE LYS HIS ASN LEU PRO LYS TYR ILE ASN ILE HIS GLN SEQRES 7 D 189 HIS TRP GLN LEU ILE THR LYS ASP THR ASP THR SER ASP SEQRES 8 D 189 SER ASN ILE MET LYS PHE ALA ASN LEU CYS TYR LYS ASP SEQRES 9 D 189 LEU LEU LYS VAL HIS SER ARG VAL GLN PHE PHE ARG LYS SEQRES 10 D 189 LEU GLU GLY ASN TYR VAL ASN ASP LYS GLN TYR SER LEU SEQRES 11 D 189 LEU HIS ILE ASP ASN MET GLY LEU ASN VAL SER PHE ARG SEQRES 12 D 189 LEU GLY ALA ASP ILE ILE LYS ILE LYS VAL ASP ASP GLY SEQRES 13 D 189 ASP ASP GLU ILE ILE ASP CYS THR PHE ASN GLY GLU LYS SEQRES 14 D 189 ASN ILE SER LEU LEU GLY SER ILE TYR GLY ILE THR ASN SEQRES 15 D 189 ARG PHE GLN SER ILE ILE MET SEQRES 1 E 165 MET ASN ILE GLU GLN ARG LYS LYS TYR LEU ASP ILE THR SEQRES 2 E 165 LEU ASN ASP VAL THR VAL THR CYS GLU LYS ASP MET ILE SEQRES 3 E 165 LEU LEU ARG LYS GLY SER PHE THR ALA SER PHE ARG ILE SEQRES 4 E 165 ALA VAL GLU ASN GLU SER ILE ARG SER MET ALA ILE ASP SEQRES 5 E 165 LEU ASN ALA PHE GLU VAL GLU LEU GLN PRO ILE ILE GLN SEQRES 6 E 165 TYR ALA GLU ASP THR GLN ASN VAL ASN VAL ALA MET MET SEQRES 7 E 165 ALA VAL VAL GLN PHE LEU ARG ILE LYS GLU LEU HIS GLU SEQRES 8 E 165 GLN MET ILE SER LYS ILE VAL GLU ALA SER LYS PHE ILE SEQRES 9 E 165 ARG ALA SER ASN ASN THR ILE THR LEU ASN ASP LEU GLU SEQRES 10 E 165 VAL SER PHE HIS CSX TYR TRP ASN LEU PRO SER PRO TYR SEQRES 11 E 165 PRO GLU THR LEU ILE LEU THR ASN LYS VAL GLN LYS ILE SEQRES 12 E 165 LEU ASP PHE LEU ILE TYR GLN TYR GLY ILE GLN LEU GLY SEQRES 13 E 165 VAL ILE LYS TYR GLY SER THR ILE ILE SEQRES 1 F 67 MET LYS THR MET HIS PRO SER LEU SER VAL ALA LEU SER SEQRES 2 F 67 ASN THR PHE GLY LEU ILE LYS ASP ASP LYS MET SER ASN SEQRES 3 F 67 GLU ILE TYR GLN GLN ASP LYS ILE ASP PHE ASN LEU LYS SEQRES 4 F 67 LEU LYS THR ASP PHE SER LYS PRO LEU ILE SER GLU LYS SEQRES 5 F 67 GLU GLU ASN SER LEU ASN GLY LEU THR ASN ALA MET ASP SEQRES 6 F 67 ASN ASN MODRES 5MU3 CSX E 227 CYS MODIFIED RESIDUE HET CSX E 227 11 HETNAM CSX S-OXY CYSTEINE FORMUL 5 CSX C3 H7 N O3 S FORMUL 7 HOH *338(H2 O) HELIX 1 AA1 THR A 108 LEU A 119 1 12 HELIX 2 AA2 ASN A 179 LYS A 189 1 11 HELIX 3 AA3 SER A 194 LEU A 222 1 29 HELIX 4 AA4 TYR A 282 ARG A 287 5 6 HELIX 5 AA5 ILE B 108 ASN B 120 1 13 HELIX 6 AA6 PHE B 161 GLN B 176 1 16 HELIX 7 AA7 ASN B 177 SER B 206 1 30 HELIX 8 AA8 VAL B 245 GLY B 257 1 13 HELIX 9 AA9 GLY B 257 THR B 268 1 12 HELIX 10 AB1 GLU C 320 ASN C 330 1 11 HELIX 11 AB2 THR D 108 LEU D 119 1 12 HELIX 12 AB3 ASN D 179 LYS D 189 1 11 HELIX 13 AB4 SER D 194 LEU D 222 1 29 HELIX 14 AB5 TYR D 282 ILE D 291 5 10 HELIX 15 AB6 ASN E 107 ASN E 120 1 14 HELIX 16 AB7 PHE E 161 GLN E 176 1 16 HELIX 17 AB8 ASN E 177 ALA E 205 1 29 HELIX 18 AB9 VAL E 245 GLY E 257 1 13 HELIX 19 AC1 GLY E 257 THR E 268 1 12 HELIX 20 AC2 ASN F 319 ASN F 330 1 12 SHEET 1 AA1 4 VAL A 122 TYR A 129 0 SHEET 2 AA1 4 ILE A 132 LEU A 139 -1 O PHE A 134 N VAL A 127 SHEET 3 AA1 4 PHE A 153 PRO A 159 -1 O LEU A 157 N MET A 135 SHEET 4 AA1 4 TRP A 167 HIS A 172 -1 O LYS A 171 N ILE A 156 SHEET 1 AA2 2 PHE A 142 ASP A 143 0 SHEET 2 AA2 2 LYS A 148 TYR A 149 -1 O LYS A 148 N ASP A 143 SHEET 1 AA3 6 TYR A 226 VAL A 227 0 SHEET 2 AA3 6 LYS A 230 ILE A 237 -1 O LYS A 230 N VAL A 227 SHEET 3 AA3 6 ASN A 243 LEU A 248 -1 O ARG A 247 N SER A 233 SHEET 4 AA3 6 ASP A 251 ASP A 258 -1 O ILE A 255 N VAL A 244 SHEET 5 AA3 6 GLU A 263 PHE A 269 -1 O ASP A 266 N LYS A 256 SHEET 6 AA3 6 GLU A 272 LYS A 273 -1 O GLU A 272 N PHE A 269 SHEET 1 AA4 6 TYR A 226 VAL A 227 0 SHEET 2 AA4 6 LYS A 230 ILE A 237 -1 O LYS A 230 N VAL A 227 SHEET 3 AA4 6 ASN A 243 LEU A 248 -1 O ARG A 247 N SER A 233 SHEET 4 AA4 6 ASP A 251 ASP A 258 -1 O ILE A 255 N VAL A 244 SHEET 5 AA4 6 GLU A 263 PHE A 269 -1 O ASP A 266 N LYS A 256 SHEET 6 AA4 6 GLY A 279 SER A 280 -1 O GLY A 279 N ILE A 264 SHEET 1 AA5 4 THR B 123 GLU B 127 0 SHEET 2 AA5 4 MET B 130 LYS B 135 -1 O LEU B 132 N THR B 125 SHEET 3 AA5 4 PHE B 138 GLU B 147 -1 O ALA B 140 N LEU B 133 SHEET 4 AA5 4 SER B 150 LEU B 158 -1 O ASP B 157 N SER B 141 SHEET 1 AA6 4 ILE B 209 ARG B 210 0 SHEET 2 AA6 4 THR B 215 LEU B 218 -1 O THR B 217 N ILE B 209 SHEET 3 AA6 4 LEU B 221 TYR B 228 -1 O VAL B 223 N ILE B 216 SHEET 4 AA6 4 GLU B 237 THR B 242 -1 O LEU B 239 N HIS B 226 SHEET 1 AA7 4 VAL D 122 TYR D 129 0 SHEET 2 AA7 4 ILE D 132 LEU D 139 -1 O ARG D 138 N SER D 123 SHEET 3 AA7 4 PHE D 153 PRO D 159 -1 O PHE D 153 N LEU D 139 SHEET 4 AA7 4 TRP D 167 HIS D 172 -1 O LYS D 171 N ILE D 156 SHEET 1 AA8 2 PHE D 142 ASP D 143 0 SHEET 2 AA8 2 LYS D 148 TYR D 149 -1 O LYS D 148 N ASP D 143 SHEET 1 AA9 6 TYR D 226 VAL D 227 0 SHEET 2 AA9 6 LYS D 230 ILE D 237 -1 O LYS D 230 N VAL D 227 SHEET 3 AA9 6 ASN D 243 LEU D 248 -1 O SER D 245 N HIS D 236 SHEET 4 AA9 6 ASP D 251 ASP D 258 -1 O ILE D 253 N PHE D 246 SHEET 5 AA9 6 GLU D 263 PHE D 269 -1 O GLU D 263 N ASP D 258 SHEET 6 AA9 6 GLU D 272 LYS D 273 -1 O GLU D 272 N PHE D 269 SHEET 1 AB1 6 TYR D 226 VAL D 227 0 SHEET 2 AB1 6 LYS D 230 ILE D 237 -1 O LYS D 230 N VAL D 227 SHEET 3 AB1 6 ASN D 243 LEU D 248 -1 O SER D 245 N HIS D 236 SHEET 4 AB1 6 ASP D 251 ASP D 258 -1 O ILE D 253 N PHE D 246 SHEET 5 AB1 6 GLU D 263 PHE D 269 -1 O GLU D 263 N ASP D 258 SHEET 6 AB1 6 GLY D 279 SER D 280 -1 O GLY D 279 N ILE D 264 SHEET 1 AB2 4 THR E 123 GLU E 127 0 SHEET 2 AB2 4 MET E 130 LYS E 135 -1 O ARG E 134 N THR E 123 SHEET 3 AB2 4 PHE E 138 ALA E 145 -1 O ALA E 140 N LEU E 133 SHEET 4 AB2 4 SER E 153 LEU E 158 -1 O ASP E 157 N SER E 141 SHEET 1 AB3 5 ILE E 209 ARG E 210 0 SHEET 2 AB3 5 THR E 215 LEU E 218 -1 O THR E 217 N ILE E 209 SHEET 3 AB3 5 LEU E 221 TYR E 228 -1 O VAL E 223 N ILE E 216 SHEET 4 AB3 5 GLU E 237 THR E 242 -1 O LEU E 239 N HIS E 226 SHEET 5 AB3 5 LEU F 331 LYS F 332 1 O LYS F 332 N THR E 238 LINK C HIS E 226 N CSX E 227 1555 1555 1.33 LINK C CSX E 227 N TYR E 228 1555 1555 1.33 CISPEP 1 LEU B 231 PRO B 232 0 -0.65 CISPEP 2 LEU E 231 PRO E 232 0 2.82 CRYST1 93.342 105.476 122.982 90.00 90.00 90.00 P 2 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010713 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009481 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008131 0.00000