HEADER MEMBRANE PROTEIN 20-JAN-17 5MWV TITLE SOLID-STATE NMR STRUCTURE OF OUTER MEMBRANE PROTEIN G IN LIPID TITLE 2 BILAYERS COMPND MOL_ID: 1; COMPND 2 MOLECULE: OUTER MEMBRANE PROTEIN G; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K12; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 GENE: OMPG, B1319, JW1312; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PORIN BETA-BARREL MEMBRANE LIPID, MEMBRANE PROTEIN EXPDTA SOLID-STATE NMR NUMMDL 15 AUTHOR J.S.RETEL,A.J.NIEUWKOOP,M.HILLER,V.A.HIGMAN,E.BARBET-MASSIN,J.STANEK, AUTHOR 2 L.B.ANDREAS,W.T.FRANKS,B.-J.VAN ROSSUM,K.R.VINOTHKUMAR,L.HANDEL, AUTHOR 3 G.G.DE PALMA,B.BARDIAUX,G.PINTACUDA,L.EMSLEY,W.KUELBRANDT, AUTHOR 4 H.OSCHKINAT REVDAT 3 15-MAY-24 5MWV 1 REMARK REVDAT 2 21-AUG-19 5MWV 1 REMARK REVDAT 1 27-DEC-17 5MWV 0 JRNL AUTH J.S.RETEL,A.J.NIEUWKOOP,M.HILLER,V.A.HIGMAN,E.BARBET-MASSIN, JRNL AUTH 2 J.STANEK,L.B.ANDREAS,W.T.FRANKS,B.J.VAN ROSSUM, JRNL AUTH 3 K.R.VINOTHKUMAR,L.HANDEL,G.G.DE PALMA,B.BARDIAUX, JRNL AUTH 4 G.PINTACUDA,L.EMSLEY,W.KUHLBRANDT,H.OSCHKINAT JRNL TITL STRUCTURE OF OUTER MEMBRANE PROTEIN G IN LIPID BILAYERS. JRNL REF NAT COMMUN V. 8 2073 2017 JRNL REFN ESSN 2041-1723 JRNL PMID 29233991 JRNL DOI 10.1038/S41467-017-02228-2 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER A. T. ET.AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5MWV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1200003122. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 280; 280; 280 REMARK 210 PH : 6.3; 6.8; 6.8 REMARK 210 IONIC STRENGTH : 50 MM NACL; 50 MM NACL; 50 MM REMARK 210 NACL REMARK 210 PRESSURE : 1 ATM; 1 ATM; 1 ATM REMARK 210 SAMPLE CONTENTS : 0.66 W/W [U-13C; U-15N; U-2H] REMARK 210 BACKEXCHANGED 1H OUTER MEMBRANE REMARK 210 PROTEIN G, 0.33 W/W LIPIDS, MES REMARK 210 BUFFER; 0.66 W/W [U-13C; U-15N; REMARK 210 U-2H] BACKEXCHANGED 1H OUTER REMARK 210 MEMBRANE PROTEIN G, HEPES BUFFER; REMARK 210 0.66 W/W [U-15N; U-1H] OUTER REMARK 210 MEMBRANE PROTEIN G, 0.33 W/W REMARK 210 LIPIDS, HEPES BUFFER; 0.66 W/W REMARK 210 [U-15N; U-1H] OUTER MEMBRANE REMARK 210 PROTEIN G, 0.33 W/W LIPIDS, REMARK 210 HEPES BUFFER; 0.66 W/W [U-15N; U- REMARK 210 1H] OUTER MEMBRANE PROTEIN G, REMARK 210 0.33 W/W LIPIDS, HEPES BUFFER; REMARK 210 0.66 W/W [U-15N; U-1H] OUTER REMARK 210 MEMBRANE PROTEIN G, 0.33 W/W REMARK 210 LIPIDS, HEPES BUFFER; 0.66 W/W REMARK 210 [U-15N; U-1H] OUTER MEMBRANE REMARK 210 PROTEIN G, 0.33 W/W NA LIPIDS, REMARK 210 HEPES BUFFER; 0.66 W/W [U-15N; U- REMARK 210 1H] OUTER MEMBRANE PROTEIN G, REMARK 210 0.33 W/W LIPIDS, HEPES BUFFER REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D (H)N(HH)NH RFDR 2MS; 3D REMARK 210 (H)NHH RFDR 2MS; 2D 13C-13C DARR REMARK 210 200MS; 2D 13C-13C DARR 400MS; 2D REMARK 210 13C-13C DARR 150MS; 2D 13C-13C REMARK 210 DARR 500MS; 3D (H)CANH; 3D (HCO) REMARK 210 CA(CO)NH; 3D (HCA)CB(CA)NH; 3D REMARK 210 (HCA)CBCA(CO)NH; 3D (H)CONH; 3D REMARK 210 (H)CO(CA)NH REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ; 1000 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : ARIA 1.21, CCPNMR ANALYSIS 2.4, REMARK 210 TALOS TALOS+ REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 15 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 217 REMARK 217 SOLID STATE NMR STUDY REMARK 217 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLID REMARK 217 STATE NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 217 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 217 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 125 HH21 ARG A 128 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 41 95.14 -167.53 REMARK 500 1 ALA A 139 -175.28 60.05 REMARK 500 1 GLU A 164 -46.01 73.57 REMARK 500 2 ASN A 41 95.04 -169.12 REMARK 500 2 PRO A 43 174.91 -49.23 REMARK 500 2 ALA A 139 -178.19 74.72 REMARK 500 2 GLU A 164 -50.22 72.92 REMARK 500 2 ARG A 176 135.23 -173.85 REMARK 500 2 GLU A 228 42.62 -94.64 REMARK 500 2 LEU A 253 -179.67 73.23 REMARK 500 2 GLU A 254 -86.11 -177.91 REMARK 500 3 ASP A 28 55.38 -105.95 REMARK 500 3 ASN A 41 94.15 -169.13 REMARK 500 3 PHE A 86 -76.75 71.97 REMARK 500 3 TYR A 99 80.31 65.29 REMARK 500 3 ALA A 139 -165.03 58.99 REMARK 500 3 GLU A 164 -49.03 72.98 REMARK 500 4 ASN A 5 73.22 -107.43 REMARK 500 4 TRP A 44 -172.99 -69.41 REMARK 500 4 ALA A 139 -178.69 72.16 REMARK 500 4 GLU A 164 -53.87 72.40 REMARK 500 4 ARG A 217 70.67 57.86 REMARK 500 5 ASN A 41 94.64 -168.85 REMARK 500 5 PRO A 43 176.27 -50.44 REMARK 500 5 LEU A 79 130.02 170.02 REMARK 500 5 HIS A 98 79.94 -150.03 REMARK 500 5 ALA A 139 -178.57 63.56 REMARK 500 5 GLU A 164 -39.71 73.60 REMARK 500 6 ASN A 41 95.37 -165.95 REMARK 500 6 PRO A 43 175.12 -45.12 REMARK 500 6 LEU A 123 -79.01 -90.15 REMARK 500 6 ALA A 139 170.09 64.42 REMARK 500 6 GLU A 164 -53.83 72.52 REMARK 500 6 GLU A 254 -159.99 60.34 REMARK 500 7 ASN A 19 35.07 -165.23 REMARK 500 7 ASN A 41 94.14 -167.68 REMARK 500 7 PRO A 43 173.53 -50.51 REMARK 500 7 TRP A 119 -176.59 176.61 REMARK 500 7 ALA A 139 -164.87 59.99 REMARK 500 7 GLU A 164 -53.41 73.88 REMARK 500 8 ASN A 41 94.97 -168.28 REMARK 500 8 PRO A 43 176.66 -59.59 REMARK 500 8 LEU A 79 106.21 69.68 REMARK 500 8 HIS A 98 62.03 69.76 REMARK 500 8 ALA A 139 -163.44 60.61 REMARK 500 8 GLU A 164 -46.92 72.47 REMARK 500 9 ASN A 41 96.01 -167.24 REMARK 500 9 PRO A 43 175.00 -47.82 REMARK 500 9 TRP A 44 -177.44 -69.72 REMARK 500 9 LEU A 123 -79.78 -90.39 REMARK 500 REMARK 500 THIS ENTRY HAS 91 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34088 RELATED DB: BMRB REMARK 900 SOLID-STATE NMR STRUCTURE OF OUTER MEMBRANE PROTEIN G IN NATIVE E. REMARK 900 COLI LIPIDS DBREF 5MWV A 2 281 UNP P76045 OMPG_ECOLI 22 301 SEQADV 5MWV MET A 1 UNP P76045 INITIATING METHIONINE SEQRES 1 A 281 MET GLU GLU ARG ASN ASP TRP HIS PHE ASN ILE GLY ALA SEQRES 2 A 281 MET TYR GLU ILE GLU ASN VAL GLU GLY TYR GLY GLU ASP SEQRES 3 A 281 MET ASP GLY LEU ALA GLU PRO SER VAL TYR PHE ASN ALA SEQRES 4 A 281 ALA ASN GLY PRO TRP ARG ILE ALA LEU ALA TYR TYR GLN SEQRES 5 A 281 GLU GLY PRO VAL ASP TYR SER ALA GLY LYS ARG GLY THR SEQRES 6 A 281 TRP PHE ASP ARG PRO GLU LEU GLU VAL HIS TYR GLN PHE SEQRES 7 A 281 LEU GLU ASN ASP ASP PHE SER PHE GLY LEU THR GLY GLY SEQRES 8 A 281 PHE ARG ASN TYR GLY TYR HIS TYR VAL ASP GLU PRO GLY SEQRES 9 A 281 LYS ASP THR ALA ASN MET GLN ARG TRP LYS ILE ALA PRO SEQRES 10 A 281 ASP TRP ASP VAL LYS LEU THR ASP ASP LEU ARG PHE ASN SEQRES 11 A 281 GLY TRP LEU SER MET TYR LYS PHE ALA ASN ASP LEU ASN SEQRES 12 A 281 THR THR GLY TYR ALA ASP THR ARG VAL GLU THR GLU THR SEQRES 13 A 281 GLY LEU GLN TYR THR PHE ASN GLU THR VAL ALA LEU ARG SEQRES 14 A 281 VAL ASN TYR TYR LEU GLU ARG GLY PHE ASN MET ASP ASP SEQRES 15 A 281 SER ARG ASN ASN GLY GLU PHE SER THR GLN GLU ILE ARG SEQRES 16 A 281 ALA TYR LEU PRO LEU THR LEU GLY ASN HIS SER VAL THR SEQRES 17 A 281 PRO TYR THR ARG ILE GLY LEU ASP ARG TRP SER ASN TRP SEQRES 18 A 281 ASP TRP GLN ASP ASP ILE GLU ARG GLU GLY HIS ASP PHE SEQRES 19 A 281 ASN ARG VAL GLY LEU PHE TYR GLY TYR ASP PHE GLN ASN SEQRES 20 A 281 GLY LEU SER VAL SER LEU GLU TYR ALA PHE GLU TRP GLN SEQRES 21 A 281 ASP HIS ASP GLU GLY ASP SER ASP LYS PHE HIS TYR ALA SEQRES 22 A 281 GLY VAL GLY VAL ASN TYR SER PHE HELIX 1 AA1 MET A 27 ALA A 31 5 5 HELIX 2 AA2 VAL A 56 ALA A 60 5 5 HELIX 3 AA3 ASN A 140 GLY A 146 1 7 HELIX 4 AA4 TYR A 147 THR A 150 5 4 SHEET 1 AA116 LEU A 200 LEU A 202 0 SHEET 2 AA116 HIS A 205 THR A 211 -1 O VAL A 207 N LEU A 200 SHEET 3 AA116 VAL A 237 ASP A 244 -1 O PHE A 240 N THR A 208 SHEET 4 AA116 SER A 250 PHE A 257 -1 O LEU A 253 N TYR A 241 SHEET 5 AA116 VAL A 275 PHE A 281 -1 O ASN A 278 N SER A 250 SHEET 6 AA116 HIS A 8 TYR A 15 -1 N PHE A 9 O PHE A 281 SHEET 7 AA116 PRO A 33 ALA A 40 -1 O SER A 34 N MET A 14 SHEET 8 AA116 ARG A 45 GLN A 52 -1 O ILE A 46 N ALA A 39 SHEET 9 AA116 ASP A 68 PHE A 78 -1 O GLU A 71 N ALA A 49 SHEET 10 AA116 PHE A 86 GLY A 96 -1 O LEU A 88 N TYR A 76 SHEET 11 AA116 ASN A 109 ASP A 120 -1 O MET A 110 N TYR A 95 SHEET 12 AA116 ARG A 128 LYS A 137 -1 O MET A 135 N ILE A 115 SHEET 13 AA116 ARG A 151 TYR A 160 -1 O GLU A 153 N SER A 134 SHEET 14 AA116 LEU A 168 GLU A 175 -1 O VAL A 170 N LEU A 158 SHEET 15 AA116 ILE A 194 TYR A 197 -1 O ARG A 195 N ASN A 171 SHEET 16 AA116 HIS A 205 THR A 211 -1 O THR A 211 N ALA A 196 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1