HEADER DNA BINDING PROTEIN 06-FEB-17 5N1C TITLE IODINATED FORM OF THE MYCOBACTERIUM TUBERCULOSIS REPRESSOR ETHR2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TETR FAMILY TRANSCRIPTIONAL REGULATOR; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: PURIFICATION TAG: RESIDUE 1-20 CHEMICAL MODIFICATION COMPND 7 (IODINATION REACTION) : TYR52 AND TYR133 (NUMBERING ACCORDING THE COMPND 8 GENE SEQUENCE) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS H37RV; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 ATCC: 25618; SOURCE 5 GENE: RV0078, LH57_00450; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS REPRESSOR, ETHR, IODINATION, CHEMICAL MODIFICATION, DNA BINDING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.WINTJENS,A.WOHLKONIG REVDAT 3 01-MAR-23 5N1C 1 SPRSDE REVDAT 2 13-DEC-17 5N1C 1 JRNL REVDAT 1 26-APR-17 5N1C 0 JRNL AUTH N.BLONDIAUX,M.MOUNE,M.DESROSES,R.FRITA,M.FLIPO,V.MATHYS, JRNL AUTH 2 K.SOETAERT,M.KIASS,V.DELORME,K.DJAOUT,V.TREBOSC,C.KEMMER, JRNL AUTH 3 R.WINTJENS,A.WOHLKONIG,R.ANTOINE,L.HUOT,D.HOT,M.COSCOLLA, JRNL AUTH 4 J.FELDMANN,S.GAGNEUX,C.LOCHT,P.BRODIN,M.GITZINGER,B.DEPREZ, JRNL AUTH 5 N.WILLAND,A.R.BAULARD JRNL TITL REVERSION OF ANTIBIOTIC RESISTANCE IN MYCOBACTERIUM JRNL TITL 2 TUBERCULOSIS BY SPIROISOXAZOLINE SMART-420. JRNL REF SCIENCE V. 355 1206 2017 JRNL REFN ESSN 1095-9203 JRNL PMID 28302858 JRNL DOI 10.1126/SCIENCE.AAG1006 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.WOHLKONIG,H.REMAUT,M.MOUNE,A.TANINA,F.MEYER,M.DESROSES, REMARK 1 AUTH 2 J.STEYAERT,N.WILLAND,A.R.BAULARD,R.WINTJENS REMARK 1 TITL STRUCTURAL ANALYSIS OF THE INTERACTION BETWEEN REMARK 1 TITL 2 SPIROISOXAZOLINE SMART-420 AND THE MYCOBACTERIUM REMARK 1 TITL 3 TUBERCULOSIS REPRESSOR ETHR2. REMARK 1 REF BIOCHEM. BIOPHYS. RES. V. 487 403 2017 REMARK 1 REF 2 COMMUN. REMARK 1 REFN ESSN 1090-2104 REMARK 1 PMID 28416386 REMARK 1 DOI 10.1016/J.BBRC.2017.04.074 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0155 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 57.10 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 11878 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.243 REMARK 3 R VALUE (WORKING SET) : 0.240 REMARK 3 FREE R VALUE : 0.308 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 626 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 799 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.45 REMARK 3 BIN R VALUE (WORKING SET) : 0.3520 REMARK 3 BIN FREE R VALUE SET COUNT : 43 REMARK 3 BIN FREE R VALUE : 0.3650 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2911 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 9 REMARK 3 SOLVENT ATOMS : 6 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 49.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.05000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : 0.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 2.610 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.405 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.319 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 15.577 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.921 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.868 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2950 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2893 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4012 ; 1.553 ; 1.985 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6579 ; 0.976 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 386 ; 6.458 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 123 ;33.928 ;22.602 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 472 ;15.782 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 37 ;13.045 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 470 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3393 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 654 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1550 ; 3.353 ; 4.716 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1549 ; 3.353 ; 4.714 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1934 ; 5.227 ; 7.067 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1935 ; 5.226 ; 7.069 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1400 ; 4.047 ; 5.031 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1401 ; 4.046 ; 5.032 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2079 ; 6.186 ; 7.421 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3418 ; 9.451 ;57.604 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3419 ; 9.450 ;57.616 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 11 200 B 11 200 11416 0.09 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5N1C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1200003399. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-AUG-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-D REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS VERSION MARCH 30, 2013 REMARK 200 DATA SCALING SOFTWARE : XDS VERSION MARCH 30, 2013 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12520 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 60.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 38.50 REMARK 200 R MERGE (I) : 0.23400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.67 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 26.20 REMARK 200 R MERGE FOR SHELL (I) : 1.70000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXCD 2006/3, PHASER 2.5.6, PARROT VERSION 1.0.2 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM NACL, 200 MM NA CITRATE PH 4.2 REMARK 280 AND 15% POLYETHYLENE GLYCOL MONOMETHYLETHER 5000, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.71500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.52000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.71500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.52000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 ILE A 3 REMARK 465 LYS A 4 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 ILE B 3 REMARK 465 LYS B 4 REMARK 465 ARG B 5 REMARK 465 ARG B 6 REMARK 465 THR B 7 REMARK 465 GLN B 8 REMARK 465 GLU B 9 REMARK 465 GLU B 10 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 6 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 8 CG CD OE1 NE2 REMARK 470 ARG A 11 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 71 CG CD OE1 NE2 REMARK 470 ARG A 132 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 181 CG CD CE NZ REMARK 470 ARG B 11 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 16 CG CD NE CZ NH1 NH2 REMARK 470 HIS B 53 CG ND1 CD2 CE1 NE2 REMARK 470 VAL B 81 CG1 CG2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 306 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5ICJ RELATED DB: PDB REMARK 900 5ICJ CONTAINS THE SAME PROTEIN COMPLEXED WITH THE LIGAND SMART-420 DBREF 5N1C A 1 201 UNP O53623 O53623_MYCTU 1 201 DBREF 5N1C B 1 201 UNP O53623 O53623_MYCTU 1 201 SEQADV 5N1C MET A -19 UNP O53623 INITIATING METHIONINE SEQADV 5N1C GLY A -18 UNP O53623 EXPRESSION TAG SEQADV 5N1C SER A -17 UNP O53623 EXPRESSION TAG SEQADV 5N1C SER A -16 UNP O53623 EXPRESSION TAG SEQADV 5N1C HIS A -15 UNP O53623 EXPRESSION TAG SEQADV 5N1C HIS A -14 UNP O53623 EXPRESSION TAG SEQADV 5N1C HIS A -13 UNP O53623 EXPRESSION TAG SEQADV 5N1C HIS A -12 UNP O53623 EXPRESSION TAG SEQADV 5N1C HIS A -11 UNP O53623 EXPRESSION TAG SEQADV 5N1C HIS A -10 UNP O53623 EXPRESSION TAG SEQADV 5N1C SER A -9 UNP O53623 EXPRESSION TAG SEQADV 5N1C SER A -8 UNP O53623 EXPRESSION TAG SEQADV 5N1C GLY A -7 UNP O53623 EXPRESSION TAG SEQADV 5N1C LEU A -6 UNP O53623 EXPRESSION TAG SEQADV 5N1C VAL A -5 UNP O53623 EXPRESSION TAG SEQADV 5N1C PRO A -4 UNP O53623 EXPRESSION TAG SEQADV 5N1C ARG A -3 UNP O53623 EXPRESSION TAG SEQADV 5N1C GLY A -2 UNP O53623 EXPRESSION TAG SEQADV 5N1C SER A -1 UNP O53623 EXPRESSION TAG SEQADV 5N1C HIS A 0 UNP O53623 EXPRESSION TAG SEQADV 5N1C MET B -19 UNP O53623 INITIATING METHIONINE SEQADV 5N1C GLY B -18 UNP O53623 EXPRESSION TAG SEQADV 5N1C SER B -17 UNP O53623 EXPRESSION TAG SEQADV 5N1C SER B -16 UNP O53623 EXPRESSION TAG SEQADV 5N1C HIS B -15 UNP O53623 EXPRESSION TAG SEQADV 5N1C HIS B -14 UNP O53623 EXPRESSION TAG SEQADV 5N1C HIS B -13 UNP O53623 EXPRESSION TAG SEQADV 5N1C HIS B -12 UNP O53623 EXPRESSION TAG SEQADV 5N1C HIS B -11 UNP O53623 EXPRESSION TAG SEQADV 5N1C HIS B -10 UNP O53623 EXPRESSION TAG SEQADV 5N1C SER B -9 UNP O53623 EXPRESSION TAG SEQADV 5N1C SER B -8 UNP O53623 EXPRESSION TAG SEQADV 5N1C GLY B -7 UNP O53623 EXPRESSION TAG SEQADV 5N1C LEU B -6 UNP O53623 EXPRESSION TAG SEQADV 5N1C VAL B -5 UNP O53623 EXPRESSION TAG SEQADV 5N1C PRO B -4 UNP O53623 EXPRESSION TAG SEQADV 5N1C ARG B -3 UNP O53623 EXPRESSION TAG SEQADV 5N1C GLY B -2 UNP O53623 EXPRESSION TAG SEQADV 5N1C SER B -1 UNP O53623 EXPRESSION TAG SEQADV 5N1C HIS B 0 UNP O53623 EXPRESSION TAG SEQRES 1 A 221 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 221 LEU VAL PRO ARG GLY SER HIS MET GLU ILE LYS ARG ARG SEQRES 3 A 221 THR GLN GLU GLU ARG SER ALA ALA THR ARG GLU ALA LEU SEQRES 4 A 221 ILE THR GLY ALA ARG LYS LEU TRP GLY LEU ARG GLY TYR SEQRES 5 A 221 ALA GLU VAL GLY THR PRO GLU ILE ALA THR GLU ALA GLY SEQRES 6 A 221 VAL THR ARG GLY ALA MET TYI HIS GLN PHE ALA ASP LYS SEQRES 7 A 221 ALA ALA LEU PHE ARG ASP VAL VAL GLU VAL VAL GLU GLN SEQRES 8 A 221 ASP VAL MET ALA ARG MET ALA THR LEU VAL ALA ALA SER SEQRES 9 A 221 GLY ALA ALA THR PRO ALA ASP ALA ILE ARG ALA ALA VAL SEQRES 10 A 221 ASP ALA TRP LEU GLU VAL SER GLY ASP PRO GLU VAL ARG SEQRES 11 A 221 GLN LEU ILE LEU LEU ASP ALA PRO VAL VAL LEU GLY TRP SEQRES 12 A 221 ALA GLY PHE ARG ASP VAL ALA GLN ARG TYI SER LEU GLY SEQRES 13 A 221 MET THR GLU GLN LEU ILE THR GLU ALA ILE ARG ALA GLY SEQRES 14 A 221 GLN LEU ALA ARG GLN PRO VAL ARG PRO LEU ALA GLN VAL SEQRES 15 A 221 LEU ILE GLY ALA LEU ASP GLU ALA ALA MET PHE ILE ALA SEQRES 16 A 221 THR ALA ASP ASP PRO LYS ARG ALA ARG ARG GLU THR ARG SEQRES 17 A 221 GLN VAL LEU ARG ARG LEU ILE ASP GLY MET LEU ASN GLY SEQRES 1 B 221 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 221 LEU VAL PRO ARG GLY SER HIS MET GLU ILE LYS ARG ARG SEQRES 3 B 221 THR GLN GLU GLU ARG SER ALA ALA THR ARG GLU ALA LEU SEQRES 4 B 221 ILE THR GLY ALA ARG LYS LEU TRP GLY LEU ARG GLY TYR SEQRES 5 B 221 ALA GLU VAL GLY THR PRO GLU ILE ALA THR GLU ALA GLY SEQRES 6 B 221 VAL THR ARG GLY ALA MET TYI HIS GLN PHE ALA ASP LYS SEQRES 7 B 221 ALA ALA LEU PHE ARG ASP VAL VAL GLU VAL VAL GLU GLN SEQRES 8 B 221 ASP VAL MET ALA ARG MET ALA THR LEU VAL ALA ALA SER SEQRES 9 B 221 GLY ALA ALA THR PRO ALA ASP ALA ILE ARG ALA ALA VAL SEQRES 10 B 221 ASP ALA TRP LEU GLU VAL SER GLY ASP PRO GLU VAL ARG SEQRES 11 B 221 GLN LEU ILE LEU LEU ASP ALA PRO VAL VAL LEU GLY TRP SEQRES 12 B 221 ALA GLY PHE ARG ASP VAL ALA GLN ARG TYI SER LEU GLY SEQRES 13 B 221 MET THR GLU GLN LEU ILE THR GLU ALA ILE ARG ALA GLY SEQRES 14 B 221 GLN LEU ALA ARG GLN PRO VAL ARG PRO LEU ALA GLN VAL SEQRES 15 B 221 LEU ILE GLY ALA LEU ASP GLU ALA ALA MET PHE ILE ALA SEQRES 16 B 221 THR ALA ASP ASP PRO LYS ARG ALA ARG ARG GLU THR ARG SEQRES 17 B 221 GLN VAL LEU ARG ARG LEU ILE ASP GLY MET LEU ASN GLY MODRES 5N1C TYI A 52 TYR MODIFIED RESIDUE MODRES 5N1C TYI A 133 TYR MODIFIED RESIDUE MODRES 5N1C TYI B 52 TYR MODIFIED RESIDUE MODRES 5N1C TYI B 133 TYR MODIFIED RESIDUE HET TYI A 52 14 HET TYI A 133 14 HET TYI B 52 14 HET TYI B 133 14 HET IOD A 301 1 HET IOD A 302 1 HET IOD A 303 1 HET IOD A 304 1 HET IOD A 305 1 HET IOD A 306 1 HET IOD B 301 1 HET IOD B 302 1 HET IOD B 303 1 HETNAM TYI 3,5-DIIODOTYROSINE HETNAM IOD IODIDE ION FORMUL 1 TYI 4(C9 H9 I2 N O3) FORMUL 3 IOD 9(I 1-) FORMUL 12 HOH *6(H2 O) HELIX 1 AA1 ARG A 5 VAL A 35 1 31 HELIX 2 AA2 GLY A 36 ALA A 44 1 9 HELIX 3 AA3 THR A 47 PHE A 55 1 9 HELIX 4 AA4 ASP A 57 GLY A 85 1 29 HELIX 5 AA5 THR A 88 ASP A 106 1 19 HELIX 6 AA6 ASP A 106 ILE A 113 1 8 HELIX 7 AA7 LEU A 115 LEU A 121 1 7 HELIX 8 AA8 GLY A 122 ALA A 148 1 27 HELIX 9 AA9 PRO A 155 THR A 176 1 22 HELIX 10 AB1 ASP A 179 LEU A 199 1 21 HELIX 11 AB2 SER B 12 VAL B 35 1 24 HELIX 12 AB3 GLY B 36 ALA B 44 1 9 HELIX 13 AB4 THR B 47 PHE B 55 1 9 HELIX 14 AB5 ASP B 57 GLY B 85 1 29 HELIX 15 AB6 THR B 88 ASP B 106 1 19 HELIX 16 AB7 ASP B 106 ILE B 113 1 8 HELIX 17 AB8 LEU B 115 LEU B 121 1 7 HELIX 18 AB9 GLY B 122 ALA B 148 1 27 HELIX 19 AC1 PRO B 155 THR B 176 1 22 HELIX 20 AC2 ASP B 179 LEU B 199 1 21 LINK C MET A 51 N TYI A 52 1555 1555 1.33 LINK C TYI A 52 N HIS A 53 1555 1555 1.33 LINK C ARG A 132 N TYI A 133 1555 1555 1.33 LINK C TYI A 133 N SER A 134 1555 1555 1.32 LINK C MET B 51 N TYI B 52 1555 1555 1.33 LINK C TYI B 52 N HIS B 53 1555 1555 1.33 LINK C ARG B 132 N TYI B 133 1555 1555 1.32 LINK C TYI B 133 N SER B 134 1555 1555 1.32 SITE 1 AC1 2 GLN A 154 MET A 198 SITE 1 AC2 1 MET A 137 SITE 1 AC3 1 ILE A 195 SITE 1 AC4 2 ARG A 5 ARG B 76 CRYST1 59.430 75.040 88.000 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016827 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013326 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011364 0.00000