HEADER CELL CYCLE 06-FEB-17 5N1W TITLE STRUCTURE OF XECO2 ACETYLTRANSFERASE DOMAIN BOUND TO K105-COA TITLE 2 CONJUGATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: XECO2; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ILE-GLY-ALA-LYX-LYS-ALA,ILE-GLY-ALA-LYX-LYS-ALA,ILE-GLY- COMPND 7 ALA-LYX-LYS-ALA,ILE-GLY-ALA-LYX-LYS-ALA; COMPND 8 CHAIN: C, D; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 3 ORGANISM_COMMON: AFRICAN CLAWED FROG; SOURCE 4 ORGANISM_TAXID: 8355; SOURCE 5 GENE: XECO2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 11 ORGANISM_TAXID: 8355 KEYWDS CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR W.C.H.CHAO,B.O.WADE,M.R.SINGLETON REVDAT 4 17-JAN-24 5N1W 1 LINK REVDAT 3 13-SEP-17 5N1W 1 REMARK LINK SITE ATOM REVDAT 2 29-MAR-17 5N1W 1 JRNL REVDAT 1 15-MAR-17 5N1W 0 JRNL AUTH W.C.CHAO,B.O.WADE,C.BOUCHOUX,A.W.JONES,A.G.PURKISS, JRNL AUTH 2 S.FEDERICO,N.O'REILLY,A.P.SNIJDERS,F.UHLMANN,M.R.SINGLETON JRNL TITL STRUCTURAL BASIS OF ECO1-MEDIATED COHESIN ACETYLATION. JRNL REF SCI REP V. 7 44313 2017 JRNL REFN ESSN 2045-2322 JRNL PMID 28290497 JRNL DOI 10.1038/SREP44313 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_2664: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 56.49 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 20228 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.880 REMARK 3 FREE R VALUE TEST SET COUNT : 988 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 56.5103 - 4.3992 1.00 2798 168 0.1977 0.2452 REMARK 3 2 4.3992 - 3.4919 1.00 2768 134 0.1538 0.1982 REMARK 3 3 3.4919 - 3.0505 1.00 2742 148 0.1820 0.2067 REMARK 3 4 3.0505 - 2.7716 1.00 2740 136 0.1913 0.2438 REMARK 3 5 2.7716 - 2.5730 1.00 2712 144 0.2247 0.2559 REMARK 3 6 2.5730 - 2.4213 1.00 2764 121 0.2586 0.3023 REMARK 3 7 2.4213 - 2.3000 1.00 2716 137 0.3045 0.3689 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.630 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.018 2927 REMARK 3 ANGLE : 1.422 3957 REMARK 3 CHIRALITY : 0.064 438 REMARK 3 PLANARITY : 0.008 484 REMARK 3 DIHEDRAL : 14.914 1739 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5N1W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1200003420. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20265 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 56.493 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.27010 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.7800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 1.83400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.020 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4MXE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40% ETHYLENE GLYCOL, 0.1 M HEPES PH REMARK 280 7.5, 5% PEG 3K, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 30.30500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 520 REMARK 465 SER A 521 REMARK 465 MET A 522 REMARK 465 SER A 611 REMARK 465 LEU A 612 REMARK 465 HIS A 613 REMARK 465 GLY A 614 REMARK 465 GLU A 615 REMARK 465 PRO A 616 REMARK 465 LEU A 617 REMARK 465 GLU A 618 REMARK 465 ARG A 619 REMARK 465 HIS A 620 REMARK 465 GLY B 520 REMARK 465 SER B 521 REMARK 465 MET B 522 REMARK 465 LYS B 523 REMARK 465 LYS B 524 REMARK 465 SER B 611 REMARK 465 LEU B 612 REMARK 465 HIS B 613 REMARK 465 GLY B 614 REMARK 465 GLU B 615 REMARK 465 PRO B 616 REMARK 465 LEU B 617 REMARK 465 GLU B 618 REMARK 465 ARG B 619 REMARK 465 HIS B 620 REMARK 465 ARG B 621 REMARK 465 ALA B 622 REMARK 465 VAL C 101 REMARK 465 ALA D 107 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 570 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 574 CG CD OE1 NE2 REMARK 470 GLU B 530 CG CD OE1 OE2 REMARK 470 GLU B 556 CG CD OE1 OE2 REMARK 470 GLN B 574 CG CD OE1 NE2 REMARK 470 ILE C 102 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H LYS B 550 O HOH B 901 1.40 REMARK 500 HZ2 LYS B 683 O HOH B 905 1.59 REMARK 500 O TYR B 546 O HOH B 901 1.89 REMARK 500 O HOH B 930 O HOH B 953 1.94 REMARK 500 O HOH A 931 O HOH A 957 1.96 REMARK 500 O HOH A 907 O HOH A 963 1.96 REMARK 500 O HOH B 914 O HOH B 927 2.03 REMARK 500 N LYS B 549 O HOH B 901 2.07 REMARK 500 O HOH B 935 O HOH B 948 2.14 REMARK 500 N LYS B 550 O HOH B 901 2.15 REMARK 500 O HOH A 916 O HOH A 951 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 634 CB CYS A 634 SG -0.102 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 542 40.11 -107.54 REMARK 500 ARG A 570 171.77 -59.12 REMARK 500 PRO A 572 -4.28 -59.24 REMARK 500 ASP A 677 67.16 26.56 REMARK 500 ASP A 694 61.49 -105.04 REMARK 500 ASN A 699 65.62 72.45 REMARK 500 ASP B 542 47.61 -108.64 REMARK 500 PRO B 572 -2.45 -56.24 REMARK 500 GLN B 574 -40.93 81.24 REMARK 500 ASP B 677 68.18 23.79 REMARK 500 ASP B 694 60.98 -106.34 REMARK 500 ASN B 699 65.53 70.62 REMARK 500 ALA C 104 25.05 -73.53 REMARK 500 LYS C 105 24.88 -179.51 REMARK 500 LYS C 106 -144.80 -158.11 REMARK 500 ILE D 102 -69.63 -100.52 REMARK 500 ALA D 104 11.80 -67.15 REMARK 500 LYS D 105 -58.82 -133.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 958 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH B 959 DISTANCE = 7.92 ANGSTROMS REMARK 525 HOH B 960 DISTANCE = 8.14 ANGSTROMS REMARK 525 HOH D 915 DISTANCE = 7.93 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 801 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 969 O REMARK 620 2 8HB C 802 O45 159.0 REMARK 620 3 HOH C 901 O 109.8 72.9 REMARK 620 4 HOH C 904 O 91.8 67.8 80.5 REMARK 620 5 HOH C 905 O 98.8 71.6 142.0 73.9 REMARK 620 6 HOH C 906 O 124.1 75.1 96.1 142.1 87.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 801 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 951 O REMARK 620 2 8HB D 802 O45 169.3 REMARK 620 3 HOH D 902 O 100.0 88.7 REMARK 620 4 HOH D 904 O 97.7 76.0 89.0 REMARK 620 5 HOH D 908 O 100.4 87.0 81.9 160.9 REMARK 620 6 HOH D 910 O 89.3 82.7 169.1 95.4 90.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG D 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide 8HB C 201 and LYS C REMARK 800 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide 8HB D 201 and LYS D REMARK 800 105 DBREF 5N1W A 523 702 UNP A8QZK6 A8QZK6_XENLA 523 702 DBREF 5N1W B 523 702 UNP A8QZK6 A8QZK6_XENLA 523 702 DBREF 5N1W C 101 107 PDB 5N1W 5N1W 101 107 DBREF 5N1W C 101 107 PDB 5N1W 5N1W 101 107 DBREF 5N1W D 101 107 PDB 5N1W 5N1W 101 107 DBREF 5N1W D 101 107 PDB 5N1W 5N1W 101 107 SEQADV 5N1W GLY A 520 UNP A8QZK6 EXPRESSION TAG SEQADV 5N1W SER A 521 UNP A8QZK6 EXPRESSION TAG SEQADV 5N1W MET A 522 UNP A8QZK6 EXPRESSION TAG SEQADV 5N1W GLY B 520 UNP A8QZK6 EXPRESSION TAG SEQADV 5N1W SER B 521 UNP A8QZK6 EXPRESSION TAG SEQADV 5N1W MET B 522 UNP A8QZK6 EXPRESSION TAG SEQRES 1 A 183 GLY SER MET LYS LYS GLU ARG VAL ILE THR GLU PHE TRP SEQRES 2 A 183 ASP GLY LYS ILE ILE MET VAL SER PRO ASP ASP PRO LYS SEQRES 3 A 183 TYR ALA LEU LYS LYS ALA GLU GLU VAL ARG GLU LEU VAL SEQRES 4 A 183 ASP SER GLU LEU GLY PHE GLN GLN VAL SER LEU ARG CYS SEQRES 5 A 183 PRO SER GLN THR ARG THR TYR MET PHE VAL SER ASN GLU SEQRES 6 A 183 LYS LYS ILE VAL GLY CYS LEU ILE ALA GLU PRO ILE ARG SEQRES 7 A 183 GLU ALA TYR ARG VAL LEU ALA GLU PRO PRO SER LEU HIS SEQRES 8 A 183 SER LEU HIS GLY GLU PRO LEU GLU ARG HIS ARG ALA TRP SEQRES 9 A 183 ARG CYS SER THR GLU PRO GLU PRO ALA ILE CYS GLY ILE SEQRES 10 A 183 SER ARG ILE TRP VAL PHE ALA LEU MET ARG ARG LYS ALA SEQRES 11 A 183 ILE ALA SER ARG MET VAL ASP ALA VAL ARG SER SER PHE SEQRES 12 A 183 MET TYR GLY SER VAL LEU THR THR GLU GLU ILE ALA PHE SEQRES 13 A 183 SER ASP PRO THR PRO ASP GLY LYS LEU PHE ALA SER THR SEQRES 14 A 183 TYR CYS LYS VAL PRO ASP PHE LEU VAL TYR ASN PHE VAL SEQRES 15 A 183 SER SEQRES 1 B 183 GLY SER MET LYS LYS GLU ARG VAL ILE THR GLU PHE TRP SEQRES 2 B 183 ASP GLY LYS ILE ILE MET VAL SER PRO ASP ASP PRO LYS SEQRES 3 B 183 TYR ALA LEU LYS LYS ALA GLU GLU VAL ARG GLU LEU VAL SEQRES 4 B 183 ASP SER GLU LEU GLY PHE GLN GLN VAL SER LEU ARG CYS SEQRES 5 B 183 PRO SER GLN THR ARG THR TYR MET PHE VAL SER ASN GLU SEQRES 6 B 183 LYS LYS ILE VAL GLY CYS LEU ILE ALA GLU PRO ILE ARG SEQRES 7 B 183 GLU ALA TYR ARG VAL LEU ALA GLU PRO PRO SER LEU HIS SEQRES 8 B 183 SER LEU HIS GLY GLU PRO LEU GLU ARG HIS ARG ALA TRP SEQRES 9 B 183 ARG CYS SER THR GLU PRO GLU PRO ALA ILE CYS GLY ILE SEQRES 10 B 183 SER ARG ILE TRP VAL PHE ALA LEU MET ARG ARG LYS ALA SEQRES 11 B 183 ILE ALA SER ARG MET VAL ASP ALA VAL ARG SER SER PHE SEQRES 12 B 183 MET TYR GLY SER VAL LEU THR THR GLU GLU ILE ALA PHE SEQRES 13 B 183 SER ASP PRO THR PRO ASP GLY LYS LEU PHE ALA SER THR SEQRES 14 B 183 TYR CYS LYS VAL PRO ASP PHE LEU VAL TYR ASN PHE VAL SEQRES 15 B 183 SER SEQRES 1 C 7 VAL ILE GLY ALA LYS LYS ALA SEQRES 1 D 7 VAL ILE GLY ALA LYS LYS ALA HET MG C 801 1 HET 8HB C 802 52 HET MG D 801 1 HET 8HB D 802 52 HETNAM MG MAGNESIUM ION HETNAM 8HB (2~{S})-2-[2-[3-[[(2~{R})-4-[[[(2~{R},3~{S},4~{R}, HETNAM 2 8HB 5~{R})-5-(6-AMINOPURIN-9-YL)-4-OXIDANYL-3- HETNAM 3 8HB PHOSPHONOOXY-OXOLAN-2-YL]METHOXY-OXIDANYL- HETNAM 4 8HB PHOSPHORYL]OXY-OXIDANYL-PHOSPHORYL]OXY-3,3-DIMETHYL-2- HETNAM 5 8HB OXIDANYL-BUTANOYL]AMINO]PROPANOYLAMINO]ETHYLSULFANYL]P HETNAM 6 8HB ROPANOIC ACID FORMUL 5 MG 2(MG 2+) FORMUL 6 8HB 2(C24 H40 N7 O18 P3 S) FORMUL 9 HOH *156(H2 O) HELIX 1 AA1 PRO A 544 LEU A 562 1 19 HELIX 2 AA2 CYS A 571 THR A 575 5 5 HELIX 3 AA3 ALA A 643 ARG A 646 5 4 HELIX 4 AA4 ALA A 649 PHE A 662 1 14 HELIX 5 AA5 THR A 669 GLU A 671 5 3 HELIX 6 AA6 THR A 679 LYS A 691 1 13 HELIX 7 AA7 PRO B 544 LEU B 562 1 19 HELIX 8 AA8 ALA B 643 ARG B 646 5 4 HELIX 9 AA9 ALA B 649 PHE B 662 1 14 HELIX 10 AB1 THR B 679 LYS B 691 1 13 SHEET 1 AA1 9 VAL A 527 PHE A 531 0 SHEET 2 AA1 9 GLY A 534 VAL A 539 -1 O ILE A 536 N THR A 529 SHEET 3 AA1 9 ARG A 576 SER A 582 -1 O VAL A 581 N LYS A 535 SHEET 4 AA1 9 ILE A 587 PRO A 595 -1 O LEU A 591 N TYR A 578 SHEET 5 AA1 9 CYS A 634 VAL A 641 -1 O GLY A 635 N GLU A 594 SHEET 6 AA1 9 ILE A 673 SER A 676 1 O ALA A 674 N ILE A 636 SHEET 7 AA1 9 LEU A 696 TYR A 698 1 O LEU A 696 N PHE A 675 SHEET 8 AA1 9 GLU A 598 LEU A 603 -1 N TYR A 600 O VAL A 697 SHEET 9 AA1 9 ARG A 624 CYS A 625 -1 O ARG A 624 N LEU A 603 SHEET 1 AA2 9 VAL A 527 PHE A 531 0 SHEET 2 AA2 9 GLY A 534 VAL A 539 -1 O ILE A 536 N THR A 529 SHEET 3 AA2 9 ARG A 576 SER A 582 -1 O VAL A 581 N LYS A 535 SHEET 4 AA2 9 ILE A 587 PRO A 595 -1 O LEU A 591 N TYR A 578 SHEET 5 AA2 9 CYS A 634 VAL A 641 -1 O GLY A 635 N GLU A 594 SHEET 6 AA2 9 ILE A 673 SER A 676 1 O ALA A 674 N ILE A 636 SHEET 7 AA2 9 LEU A 696 TYR A 698 1 O LEU A 696 N PHE A 675 SHEET 8 AA2 9 GLU A 598 LEU A 603 -1 N TYR A 600 O VAL A 697 SHEET 9 AA2 9 GLU A 630 PRO A 631 -1 O GLU A 630 N ALA A 599 SHEET 1 AA3 2 VAL A 567 SER A 568 0 SHEET 2 AA3 2 PHE B 700 VAL B 701 -1 O PHE B 700 N SER A 568 SHEET 1 AA4 2 PHE A 700 VAL A 701 0 SHEET 2 AA4 2 VAL B 567 SER B 568 -1 O SER B 568 N PHE A 700 SHEET 1 AA5 9 VAL B 527 PHE B 531 0 SHEET 2 AA5 9 GLY B 534 VAL B 539 -1 O ILE B 536 N ILE B 528 SHEET 3 AA5 9 ARG B 576 SER B 582 -1 O VAL B 581 N LYS B 535 SHEET 4 AA5 9 ILE B 587 PRO B 595 -1 O LEU B 591 N TYR B 578 SHEET 5 AA5 9 CYS B 634 VAL B 641 -1 O GLY B 635 N GLU B 594 SHEET 6 AA5 9 ILE B 673 SER B 676 1 O ALA B 674 N ILE B 636 SHEET 7 AA5 9 LEU B 696 TYR B 698 1 O LEU B 696 N PHE B 675 SHEET 8 AA5 9 GLU B 598 LEU B 603 -1 N TYR B 600 O VAL B 697 SHEET 9 AA5 9 ARG B 624 CYS B 625 -1 O ARG B 624 N LEU B 603 SHEET 1 AA6 9 VAL B 527 PHE B 531 0 SHEET 2 AA6 9 GLY B 534 VAL B 539 -1 O ILE B 536 N ILE B 528 SHEET 3 AA6 9 ARG B 576 SER B 582 -1 O VAL B 581 N LYS B 535 SHEET 4 AA6 9 ILE B 587 PRO B 595 -1 O LEU B 591 N TYR B 578 SHEET 5 AA6 9 CYS B 634 VAL B 641 -1 O GLY B 635 N GLU B 594 SHEET 6 AA6 9 ILE B 673 SER B 676 1 O ALA B 674 N ILE B 636 SHEET 7 AA6 9 LEU B 696 TYR B 698 1 O LEU B 696 N PHE B 675 SHEET 8 AA6 9 GLU B 598 LEU B 603 -1 N TYR B 600 O VAL B 697 SHEET 9 AA6 9 GLU B 630 PRO B 631 -1 O GLU B 630 N ALA B 599 LINK NZ LYS C 105 C23 8HB C 802 1555 1555 1.46 LINK NZ LYS D 105 C23 8HB D 802 1555 1555 1.44 LINK O HOH A 969 MG MG C 801 2543 1555 2.29 LINK O HOH B 951 MG MG D 801 2554 1555 2.42 LINK MG MG C 801 O45 8HB C 802 1555 1555 2.44 LINK MG MG C 801 O HOH C 901 1555 1555 2.03 LINK MG MG C 801 O HOH C 904 1555 1555 2.25 LINK MG MG C 801 O HOH C 905 1555 1555 1.99 LINK MG MG C 801 O HOH C 906 1555 1555 2.25 LINK MG MG D 801 O45 8HB D 802 1555 1555 2.32 LINK MG MG D 801 O HOH D 902 1555 1555 2.13 LINK MG MG D 801 O HOH D 904 1555 1555 1.91 LINK MG MG D 801 O HOH D 908 1555 1555 2.28 LINK MG MG D 801 O HOH D 910 1555 1555 2.22 SITE 1 AC1 5 8HB D 802 HOH D 902 HOH D 904 HOH D 908 SITE 2 AC1 5 HOH D 910 SITE 1 AC2 5 8HB C 802 HOH C 901 HOH C 904 HOH C 905 SITE 2 AC2 5 HOH C 906 SITE 1 AC3 34 LYS A 648 PHE B 564 ILE B 636 SER B 637 SITE 2 AC3 34 ILE B 639 VAL B 641 ARG B 646 ARG B 647 SITE 3 AC3 34 LYS B 648 ALA B 649 ILE B 650 ALA B 651 SITE 4 AC3 34 SER B 652 SER B 676 ASP B 677 THR B 679 SITE 5 AC3 34 ASP B 681 GLY B 682 LEU B 684 PHE B 685 SITE 6 AC3 34 THR B 688 MG C 801 HOH B 912 GLY C 103 SITE 7 AC3 34 ALA C 104 LYS C 106 HOH C 901 HOH C 902 SITE 8 AC3 34 HOH C 903 HOH C 904 HOH C 905 HOH C 906 SITE 9 AC3 34 HOH C 907 ILE D 102 SITE 1 AC4 34 PHE A 564 ILE A 636 SER A 637 ILE A 639 SITE 2 AC4 34 TRP A 640 VAL A 641 ARG A 646 ARG A 647 SITE 3 AC4 34 LYS A 648 ALA A 649 ILE A 650 ALA A 651 SITE 4 AC4 34 SER A 652 SER A 676 ASP A 677 THR A 679 SITE 5 AC4 34 ASP A 681 LEU A 684 PHE A 685 THR A 688 SITE 6 AC4 34 MG D 801 LYS B 648 GLY D 103 ALA D 104 SITE 7 AC4 34 LYS D 106 HOH D 902 HOH D 903 HOH D 904 SITE 8 AC4 34 HOH D 905 HOH D 906 HOH D 907 HOH D 908 SITE 9 AC4 34 HOH D 909 HOH D 910 CRYST1 57.301 60.610 66.905 90.00 99.63 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017452 0.000000 0.002962 0.00000 SCALE2 0.000000 0.016499 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015160 0.00000