HEADER NICKEL-BINDING PROTEIN 19-FEB-17 5N76 TITLE CRYSTAL STRUCTURE OF THE APO-FORM OF THE CO DEHYDROGENASE ACCESSORY TITLE 2 PROTEIN COOT FROM RHODOSPIRILLUM RUBRUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: COOT; COMPND 3 CHAIN: A, D, B, C, E, F; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: COMPND 6 MCMAKVVLTKADGGRVEIGDVLEVRAEGGAVRVTTLFDEEHAFPGLAIGRVDLRSGVISL IEEQNR SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOSPIRILLUM RUBRUM; SOURCE 3 ORGANISM_TAXID: 1085; SOURCE 4 GENE: COOT; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS CODH MATURATION, NICKEL-BINDING PROTEIN, ANAEROBIC METABOLISM EXPDTA X-RAY DIFFRACTION AUTHOR J.TIMM,C.BROCHIER-ARMANET,J.PERARD,B.ZAMBELLI,S.OLLAGNIER-DE- AUTHOR 2 CHOUDENS,S.CIURLI,C.CAVAZZA REVDAT 3 16-OCT-19 5N76 1 REMARK REVDAT 2 31-MAY-17 5N76 1 JRNL REVDAT 1 10-MAY-17 5N76 0 JRNL AUTH J.TIMM,C.BROCHIER-ARMANET,J.PERARD,B.ZAMBELLI, JRNL AUTH 2 S.OLLAGNIER-DE-CHOUDENS,S.CIURLI,C.CAVAZZA JRNL TITL THE CO DEHYDROGENASE ACCESSORY PROTEIN COOT IS A NOVEL JRNL TITL 2 NICKEL-BINDING PROTEIN. JRNL REF METALLOMICS V. 9 575 2017 JRNL REFN ESSN 1756-591X JRNL PMID 28447092 JRNL DOI 10.1039/C7MT00063D REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.59 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 49987 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2748 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 239 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5N76 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1200003600. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM30A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52618 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 44.590 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 7.260 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.8400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXCD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM SODIUM ACETATE PH 4.6, 100 MM REMARK 280 CACL2 AND 16% (V/V) 2-PROPANOL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.36700 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 54.47150 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 54.47150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 27.68350 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 54.47150 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 54.47150 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 83.05050 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 54.47150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 54.47150 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 27.68350 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 54.47150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 54.47150 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 83.05050 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 55.36700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 64 REMARK 465 ASN A 65 REMARK 465 ARG A 66 REMARK 465 MET D 1 REMARK 465 GLN D 64 REMARK 465 ASN D 65 REMARK 465 ARG D 66 REMARK 465 MET B 1 REMARK 465 ASN B 65 REMARK 465 ARG B 66 REMARK 465 MET C 1 REMARK 465 ASN C 65 REMARK 465 ARG C 66 REMARK 465 MET E 1 REMARK 465 GLN E 64 REMARK 465 ASN E 65 REMARK 465 ARG E 66 REMARK 465 MET F 1 REMARK 465 ASP F 12 REMARK 465 GLY F 13 REMARK 465 GLY F 14 REMARK 465 GLN F 64 REMARK 465 ASN F 65 REMARK 465 ARG F 66 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP B 12 CB CG OD1 OD2 REMARK 470 LYS F 10 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 HIS C 41 O HOH C 101 2.06 REMARK 500 O HOH E 115 O HOH E 135 2.10 REMARK 500 OD2 ASP E 20 O HOH E 101 2.13 REMARK 500 O GLU C 40 O HOH C 102 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 125 O HOH E 108 2675 1.96 REMARK 500 OD1 ASP C 38 CB ALA E 11 8666 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU C 39 CD GLU C 39 OE1 -0.068 REMARK 500 GLU E 23 CD GLU E 23 OE2 -0.103 REMARK 500 GLU F 17 CD GLU F 17 OE1 -0.107 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 2 CA - CB - SG ANGL. DEV. = -12.6 DEGREES REMARK 500 ASP A 20 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 GLU D 23 OE1 - CD - OE2 ANGL. DEV. = 7.4 DEGREES REMARK 500 ARG D 50 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 MET B 3 CG - SD - CE ANGL. DEV. = 10.1 DEGREES REMARK 500 ARG C 32 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 GLU E 23 OE1 - CD - OE2 ANGL. DEV. = -11.9 DEGREES REMARK 500 ARG F 32 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG F 50 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 12 15.59 83.80 REMARK 500 PHE E 37 41.68 -107.15 REMARK 500 REMARK 500 REMARK: NULL DBREF 5N76 A 1 66 UNP P72320 P72320_RHORU 1 66 DBREF 5N76 D 1 66 UNP P72320 P72320_RHORU 1 66 DBREF 5N76 B 1 66 UNP P72320 P72320_RHORU 1 66 DBREF 5N76 C 1 66 UNP P72320 P72320_RHORU 1 66 DBREF 5N76 E 1 66 UNP P72320 P72320_RHORU 1 66 DBREF 5N76 F 1 66 UNP P72320 P72320_RHORU 1 66 SEQRES 1 A 66 MET CYS MET ALA LYS VAL VAL LEU THR LYS ALA ASP GLY SEQRES 2 A 66 GLY ARG VAL GLU ILE GLY ASP VAL LEU GLU VAL ARG ALA SEQRES 3 A 66 GLU GLY GLY ALA VAL ARG VAL THR THR LEU PHE ASP GLU SEQRES 4 A 66 GLU HIS ALA PHE PRO GLY LEU ALA ILE GLY ARG VAL ASP SEQRES 5 A 66 LEU ARG SER GLY VAL ILE SER LEU ILE GLU GLU GLN ASN SEQRES 6 A 66 ARG SEQRES 1 D 66 MET CYS MET ALA LYS VAL VAL LEU THR LYS ALA ASP GLY SEQRES 2 D 66 GLY ARG VAL GLU ILE GLY ASP VAL LEU GLU VAL ARG ALA SEQRES 3 D 66 GLU GLY GLY ALA VAL ARG VAL THR THR LEU PHE ASP GLU SEQRES 4 D 66 GLU HIS ALA PHE PRO GLY LEU ALA ILE GLY ARG VAL ASP SEQRES 5 D 66 LEU ARG SER GLY VAL ILE SER LEU ILE GLU GLU GLN ASN SEQRES 6 D 66 ARG SEQRES 1 B 66 MET CYS MET ALA LYS VAL VAL LEU THR LYS ALA ASP GLY SEQRES 2 B 66 GLY ARG VAL GLU ILE GLY ASP VAL LEU GLU VAL ARG ALA SEQRES 3 B 66 GLU GLY GLY ALA VAL ARG VAL THR THR LEU PHE ASP GLU SEQRES 4 B 66 GLU HIS ALA PHE PRO GLY LEU ALA ILE GLY ARG VAL ASP SEQRES 5 B 66 LEU ARG SER GLY VAL ILE SER LEU ILE GLU GLU GLN ASN SEQRES 6 B 66 ARG SEQRES 1 C 66 MET CYS MET ALA LYS VAL VAL LEU THR LYS ALA ASP GLY SEQRES 2 C 66 GLY ARG VAL GLU ILE GLY ASP VAL LEU GLU VAL ARG ALA SEQRES 3 C 66 GLU GLY GLY ALA VAL ARG VAL THR THR LEU PHE ASP GLU SEQRES 4 C 66 GLU HIS ALA PHE PRO GLY LEU ALA ILE GLY ARG VAL ASP SEQRES 5 C 66 LEU ARG SER GLY VAL ILE SER LEU ILE GLU GLU GLN ASN SEQRES 6 C 66 ARG SEQRES 1 E 66 MET CYS MET ALA LYS VAL VAL LEU THR LYS ALA ASP GLY SEQRES 2 E 66 GLY ARG VAL GLU ILE GLY ASP VAL LEU GLU VAL ARG ALA SEQRES 3 E 66 GLU GLY GLY ALA VAL ARG VAL THR THR LEU PHE ASP GLU SEQRES 4 E 66 GLU HIS ALA PHE PRO GLY LEU ALA ILE GLY ARG VAL ASP SEQRES 5 E 66 LEU ARG SER GLY VAL ILE SER LEU ILE GLU GLU GLN ASN SEQRES 6 E 66 ARG SEQRES 1 F 66 MET CYS MET ALA LYS VAL VAL LEU THR LYS ALA ASP GLY SEQRES 2 F 66 GLY ARG VAL GLU ILE GLY ASP VAL LEU GLU VAL ARG ALA SEQRES 3 F 66 GLU GLY GLY ALA VAL ARG VAL THR THR LEU PHE ASP GLU SEQRES 4 F 66 GLU HIS ALA PHE PRO GLY LEU ALA ILE GLY ARG VAL ASP SEQRES 5 F 66 LEU ARG SER GLY VAL ILE SER LEU ILE GLU GLU GLN ASN SEQRES 6 F 66 ARG FORMUL 7 HOH *239(H2 O) SHEET 1 AA1 7 ARG A 15 ILE A 18 0 SHEET 2 AA1 7 LYS A 5 THR A 9 -1 N LEU A 8 O VAL A 16 SHEET 3 AA1 7 VAL A 57 GLU A 62 1 O ILE A 58 N LYS A 5 SHEET 4 AA1 7 LEU A 46 ASP A 52 -1 N ALA A 47 O ILE A 61 SHEET 5 AA1 7 VAL D 21 GLU D 27 -1 O VAL D 24 N VAL A 51 SHEET 6 AA1 7 ALA D 30 THR D 35 -1 O THR D 34 N GLU D 23 SHEET 7 AA1 7 GLU D 40 PRO D 44 -1 O PHE D 43 N VAL D 31 SHEET 1 AA214 GLU A 40 PRO A 44 0 SHEET 2 AA214 ALA A 30 THR A 35 -1 N VAL A 33 O HIS A 41 SHEET 3 AA214 VAL A 21 GLU A 27 -1 N GLU A 23 O THR A 34 SHEET 4 AA214 LEU D 46 ASP D 52 -1 O GLY D 49 N ALA A 26 SHEET 5 AA214 VAL D 57 GLU D 62 -1 O VAL D 57 N ASP D 52 SHEET 6 AA214 LYS D 5 THR D 9 1 N LYS D 5 O ILE D 58 SHEET 7 AA214 ARG D 15 ILE D 18 -1 O VAL D 16 N LEU D 8 SHEET 8 AA214 GLU B 39 PRO B 44 -1 O ALA B 42 N ARG D 15 SHEET 9 AA214 ALA B 30 THR B 35 -1 N VAL B 31 O PHE B 43 SHEET 10 AA214 VAL B 21 GLU B 27 -1 N GLU B 23 O THR B 34 SHEET 11 AA214 LEU C 46 ASP C 52 -1 O GLY C 49 N ALA B 26 SHEET 12 AA214 VAL C 57 GLU C 62 -1 O ILE C 61 N ALA C 47 SHEET 13 AA214 LYS C 5 THR C 9 1 N LYS C 5 O ILE C 58 SHEET 14 AA214 ARG C 15 ILE C 18 -1 O ILE C 18 N VAL C 6 SHEET 1 AA314 GLU C 40 PRO C 44 0 SHEET 2 AA314 ALA C 30 THR C 35 -1 N VAL C 31 O PHE C 43 SHEET 3 AA314 VAL C 21 GLU C 27 -1 N GLU C 23 O THR C 34 SHEET 4 AA314 LEU B 46 ASP B 52 -1 N GLY B 49 O ALA C 26 SHEET 5 AA314 VAL B 57 GLU B 62 -1 O ILE B 61 N ALA B 47 SHEET 6 AA314 LYS B 5 THR B 9 1 N LYS B 5 O ILE B 58 SHEET 7 AA314 ARG B 15 ILE B 18 -1 O VAL B 16 N LEU B 8 SHEET 8 AA314 GLU F 39 PRO F 44 -1 O ALA F 42 N ARG B 15 SHEET 9 AA314 ALA F 30 THR F 35 -1 N VAL F 33 O HIS F 41 SHEET 10 AA314 VAL F 21 GLU F 27 -1 N LEU F 22 O THR F 34 SHEET 11 AA314 LEU E 46 ASP E 52 -1 N VAL E 51 O VAL F 24 SHEET 12 AA314 VAL E 57 GLU E 62 -1 O ILE E 61 N ALA E 47 SHEET 13 AA314 LYS E 5 THR E 9 1 N VAL E 7 O LEU E 60 SHEET 14 AA314 ARG E 15 ILE E 18 -1 O VAL E 16 N LEU E 8 SHEET 1 AA4 7 GLU E 40 PRO E 44 0 SHEET 2 AA4 7 ALA E 30 THR E 35 -1 N VAL E 31 O PHE E 43 SHEET 3 AA4 7 VAL E 21 GLU E 27 -1 N GLU E 23 O THR E 34 SHEET 4 AA4 7 LEU F 46 ASP F 52 -1 O GLY F 49 N ALA E 26 SHEET 5 AA4 7 VAL F 57 GLU F 62 -1 O ILE F 61 N ALA F 47 SHEET 6 AA4 7 LYS F 5 LEU F 8 1 N VAL F 7 O LEU F 60 SHEET 7 AA4 7 VAL F 16 ILE F 18 -1 O VAL F 16 N LEU F 8 SSBOND 1 CYS B 2 CYS C 2 1555 1555 2.63 SSBOND 2 CYS E 2 CYS F 2 1555 1555 2.08 CRYST1 108.943 108.943 110.734 90.00 90.00 90.00 P 41 21 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009179 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009179 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009031 0.00000