HEADER STRUCTURAL PROTEIN 28-FEB-17 5NAZ TITLE CRYSTAL STRUCTURES OF HOMOOLIGOMERS OF COLLAGEN TYPE IV. ALPHA5NC1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: COLLAGEN ALPHA-5(IV) CHAIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: COL4A5; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: SF9 KEYWDS NON-COLLAGENOUS DOMAIN OF COLLAGEN TYPE IV. A PRINCIPAL STRUCTURAL KEYWDS 2 COMPONENT OF BASEMENT MEMBRANES, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.CASINO,A.MARINA REVDAT 6 09-OCT-24 5NAZ 1 REMARK REVDAT 5 17-JAN-24 5NAZ 1 REMARK REVDAT 4 09-OCT-19 5NAZ 1 REMARK REVDAT 3 28-NOV-18 5NAZ 1 JRNL REVDAT 2 24-OCT-18 5NAZ 1 JRNL REVDAT 1 12-SEP-18 5NAZ 0 JRNL AUTH P.CASINO,R.GOZALBO-ROVIRA,J.RODRIGUEZ-DIAZ,S.BANERJEE, JRNL AUTH 2 A.BOUTAUD,V.RUBIO,B.G.HUDSON,J.SAUS,J.CERVERA,A.MARINA JRNL TITL STRUCTURES OF COLLAGEN IV GLOBULAR DOMAINS: INSIGHT INTO JRNL TITL 2 ASSOCIATED PATHOLOGIES, FOLDING AND NETWORK ASSEMBLY. JRNL REF IUCRJ V. 5 765 2018 JRNL REFN ESSN 2052-2525 JRNL PMID 30443360 JRNL DOI 10.1107/S2052252518012459 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.87 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 25014 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1333 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1845 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.2500 REMARK 3 BIN FREE R VALUE SET COUNT : 89 REMARK 3 BIN FREE R VALUE : 0.2350 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1752 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 25 REMARK 3 SOLVENT ATOMS : 116 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.116 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.099 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.065 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.148 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1841 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2493 ; 1.246 ; 1.940 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 229 ; 5.947 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 82 ;33.038 ;23.293 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 289 ;13.548 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;11.492 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 259 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1410 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5NAZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1200003807. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-NOV-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.25 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26393 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 42.880 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : 0.10000 REMARK 200 FOR THE DATA SET : 12.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.35400 REMARK 200 R SYM FOR SHELL (I) : 0.35400 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER, PHASER REMARK 200 STARTING MODEL: 1T60 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20%PEG8000, 0.2 M NACL, CAPS PH 10.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+3/4,X+1/4,-Z+1/4 REMARK 290 14555 -Y+3/4,-X+3/4,-Z+3/4 REMARK 290 15555 Y+1/4,-X+1/4,Z+3/4 REMARK 290 16555 -Y+1/4,X+3/4,Z+1/4 REMARK 290 17555 X+3/4,Z+1/4,-Y+1/4 REMARK 290 18555 -X+1/4,Z+3/4,Y+1/4 REMARK 290 19555 -X+3/4,-Z+3/4,-Y+3/4 REMARK 290 20555 X+1/4,-Z+1/4,Y+3/4 REMARK 290 21555 Z+3/4,Y+1/4,-X+1/4 REMARK 290 22555 Z+1/4,-Y+1/4,X+3/4 REMARK 290 23555 -Z+1/4,Y+3/4,X+1/4 REMARK 290 24555 -Z+3/4,-Y+3/4,-X+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 60.64150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.64150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 60.64150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 60.64150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 60.64150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 60.64150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 60.64150 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 60.64150 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 60.64150 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 60.64150 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 60.64150 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 60.64150 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 60.64150 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 60.64150 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 60.64150 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 60.64150 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 60.64150 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 60.64150 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 90.96225 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 30.32075 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 30.32075 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 90.96225 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 90.96225 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 90.96225 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 30.32075 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 30.32075 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 90.96225 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 30.32075 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 90.96225 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 30.32075 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 90.96225 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 30.32075 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 30.32075 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 30.32075 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 90.96225 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 30.32075 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 90.96225 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 90.96225 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 90.96225 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 30.32075 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 30.32075 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 90.96225 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 90.96225 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 30.32075 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 30.32075 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 30.32075 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 30.32075 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 90.96225 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 30.32075 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 90.96225 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 30.32075 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 90.96225 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 90.96225 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 90.96225 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 43880 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -283.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 -60.64150 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 -60.64150 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 60.64150 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 -60.64150 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 -1.000000 0.000000 -30.32075 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 -30.32075 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -30.32075 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 30.32075 REMARK 350 BIOMT2 5 0.000000 0.000000 1.000000 -30.32075 REMARK 350 BIOMT3 5 0.000000 1.000000 0.000000 30.32075 REMARK 350 BIOMT1 6 0.000000 0.000000 1.000000 30.32075 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 -90.96225 REMARK 350 BIOMT3 6 1.000000 0.000000 0.000000 -30.32075 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 VAL A 2 REMARK 465 ALA A 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 41 O HOH A 401 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 40 -16.44 76.34 REMARK 500 LYS A 40 -19.34 79.06 REMARK 500 ARG A 76 -129.19 -140.43 REMARK 500 SER A 148 -120.77 -147.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PG4 A 304 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 A 304 DBREF 5NAZ A 1 229 UNP P29400 CO4A5_HUMAN 1457 1685 SEQRES 1 A 229 SER VAL ALA HIS GLY PHE LEU ILE THR ARG HIS SER GLN SEQRES 2 A 229 THR THR ASP ALA PRO GLN CYS PRO GLN GLY THR LEU GLN SEQRES 3 A 229 VAL TYR GLU GLY PHE SER LEU LEU TYR VAL GLN GLY ASN SEQRES 4 A 229 LYS ARG ALA HIS GLY GLN ASP LEU GLY THR ALA GLY SER SEQRES 5 A 229 CYS LEU ARG ARG PHE SER THR MET PRO PHE MET PHE CYS SEQRES 6 A 229 ASN ILE ASN ASN VAL CYS ASN PHE ALA SER ARG ASN ASP SEQRES 7 A 229 TYR SER TYR TRP LEU SER THR PRO GLU PRO MET PRO MET SEQRES 8 A 229 SER MET GLN PRO LEU LYS GLY GLN SER ILE GLN PRO PHE SEQRES 9 A 229 ILE SER ARG CYS ALA VAL CYS GLU ALA PRO ALA VAL VAL SEQRES 10 A 229 ILE ALA VAL HIS SER GLN THR ILE GLN ILE PRO HIS CYS SEQRES 11 A 229 PRO GLN GLY TRP ASP SER LEU TRP ILE GLY TYR SER PHE SEQRES 12 A 229 MET MET HIS THR SER ALA GLY ALA GLU GLY SER GLY GLN SEQRES 13 A 229 ALA LEU ALA SER PRO GLY SER CYS LEU GLU GLU PHE ARG SEQRES 14 A 229 SER ALA PRO PHE ILE GLU CYS HIS GLY ARG GLY THR CYS SEQRES 15 A 229 ASN TYR TYR ALA ASN SER TYR SER PHE TRP LEU ALA THR SEQRES 16 A 229 VAL ASP VAL SER ASP MET PHE SER LYS PRO GLN SER GLU SEQRES 17 A 229 THR LEU LYS ALA GLY ASP LEU ARG THR ARG ILE SER ARG SEQRES 18 A 229 CYS GLN VAL CYS MET LYS ARG THR HET CL A 301 1 HET CL A 302 1 HET PG4 A 303 13 HET PG4 A 304 10 HETNAM CL CHLORIDE ION HETNAM PG4 TETRAETHYLENE GLYCOL FORMUL 2 CL 2(CL 1-) FORMUL 4 PG4 2(C8 H18 O5) FORMUL 6 HOH *116(H2 O) HELIX 1 AA1 THR A 49 GLY A 51 5 3 HELIX 2 AA2 GLN A 99 ILE A 105 5 7 HELIX 3 AA3 ALA A 149 ALA A 151 5 3 HELIX 4 AA4 SER A 160 GLY A 162 5 3 HELIX 5 AA5 ASP A 197 MET A 201 5 5 HELIX 6 AA6 ASP A 214 ILE A 219 5 6 SHEET 1 AA1 4 PHE A 6 HIS A 11 0 SHEET 2 AA1 4 ARG A 107 ALA A 113 -1 O ALA A 113 N PHE A 6 SHEET 3 AA1 4 LEU A 25 GLY A 38 -1 N LEU A 25 O GLU A 112 SHEET 4 AA1 4 CYS A 53 LEU A 54 -1 O LEU A 54 N PHE A 31 SHEET 1 AA2 6 ARG A 41 GLY A 44 0 SHEET 2 AA2 6 LEU A 25 GLY A 38 -1 N VAL A 36 O HIS A 43 SHEET 3 AA2 6 TYR A 79 LEU A 83 -1 O TYR A 81 N TYR A 35 SHEET 4 AA2 6 PHE A 173 HIS A 177 -1 O CYS A 176 N SER A 80 SHEET 5 AA2 6 THR A 181 ASN A 183 -1 O THR A 181 N HIS A 177 SHEET 6 AA2 6 LEU A 96 LYS A 97 -1 N LEU A 96 O CYS A 182 SHEET 1 AA3 2 MET A 63 ASN A 66 0 SHEET 2 AA3 2 VAL A 70 PHE A 73 -1 O ASN A 72 N PHE A 64 SHEET 1 AA4 4 VAL A 117 HIS A 121 0 SHEET 2 AA4 4 ARG A 221 LYS A 227 -1 O CYS A 225 N ILE A 118 SHEET 3 AA4 4 TRP A 134 THR A 147 -1 N LEU A 137 O VAL A 224 SHEET 4 AA4 4 CYS A 164 LEU A 165 -1 O LEU A 165 N TYR A 141 SHEET 1 AA5 3 GLY A 153 GLY A 155 0 SHEET 2 AA5 3 TRP A 134 THR A 147 -1 N HIS A 146 O SER A 154 SHEET 3 AA5 3 TYR A 189 TRP A 192 -1 O PHE A 191 N MET A 145 SSBOND 1 CYS A 20 CYS A 111 1555 1555 2.04 SSBOND 2 CYS A 53 CYS A 108 1555 1555 2.10 SSBOND 3 CYS A 65 CYS A 71 1555 1555 2.07 SSBOND 4 CYS A 130 CYS A 225 1555 1555 2.07 SSBOND 5 CYS A 164 CYS A 222 1555 1555 2.04 SSBOND 6 CYS A 176 CYS A 182 1555 1555 2.06 SITE 1 AC1 5 ALA A 74 ARG A 76 ASP A 78 GLY A 178 SITE 2 AC1 5 ARG A 179 SITE 1 AC2 3 ASN A 66 ALA A 186 TYR A 189 SITE 1 AC3 2 ASN A 66 ASN A 68 SITE 1 AC4 5 ILE A 67 ASN A 68 PRO A 86 GLU A 87 SITE 2 AC4 5 TYR A 184 CRYST1 121.283 121.283 121.283 90.00 90.00 90.00 P 41 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008245 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008245 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008245 0.00000