HEADER STRUCTURAL PROTEIN 03-MAR-17 5NCA TITLE SOLUTION STRUCTURE OF COMGC FROM STREPTOCOCCUS PNEUMONIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: COMPETENCE PROTEIN COMGC; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: COMGC, UNP RESIDU7ES 40-108; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 1313; SOURCE 4 GENE: ERS325003_01925, ERS409372_01422, ERS515225_01852; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: ROSETTA; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS COMGC, PILIN, TYPE IV PILIN, STREPTOCOCCUS PNEUMONIAE TYPE IV KEYWDS 2 COMPETENCE PILIN, STRUCTURAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.ERLENDSSON,P.SCHMEIDER,C.LICHTENBERG,K.TEILUM,U.AKBEY REVDAT 4 14-JUN-23 5NCA 1 REMARK REVDAT 3 06-SEP-17 5NCA 1 JRNL REVDAT 2 12-JUL-17 5NCA 1 REVDAT 1 05-JUL-17 5NCA 0 JRNL AUTH S.MUSCHIOL,S.ERLENDSSON,M.S.ASCHTGEN,V.OLIVEIRA,P.SCHMIEDER, JRNL AUTH 2 C.DE LICHTENBERG,K.TEILUM,T.BOESEN,U.AKBEY, JRNL AUTH 3 B.HENRIQUES-NORMARK JRNL TITL STRUCTURE OF THE COMPETENCE PILUS MAJOR PILIN COMGC IN JRNL TITL 2 STREPTOCOCCUS PNEUMONIAE. JRNL REF J. BIOL. CHEM. V. 292 14134 2017 JRNL REFN ESSN 1083-351X JRNL PMID 28659339 JRNL DOI 10.1074/JBC.M117.787671 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER A. T. ET.AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5NCA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1200003094. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 283; 298 REMARK 210 PH : 7.5; 7.5 REMARK 210 IONIC STRENGTH : 50; 50 REMARK 210 PRESSURE : AMBIENT PA; AMBIENT PA REMARK 210 SAMPLE CONTENTS : 900 UM [U-13C; U-15N] COMGC, 50 REMARK 210 MM TRIS, 50 MM NACL, 0.25 MM DSS, REMARK 210 90% H2O, 10%D20; 500 UM [U-13C; REMARK 210 U-15N] COMGC, 50 MM TRIS, 50 MM REMARK 210 NACL, 0.25 MM DSS, 4 % HEXANOL/ REMARK 210 PEG, 80% H2O, 20%D20 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D HNCO; 3D HN(CA)CO; 3D HNCA; REMARK 210 3D HN(CO)CA; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; HCC_CO_NH; 3D HCCH- REMARK 210 TOCSY; 13C-TOCSY-HSQC; 15N-TOCSY- REMARK 210 HSQC; 3D 1H-15N NOESY; 3D 1H-13C REMARK 210 NOESY; HSQC IPAP REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVIII; DD2 REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : 20 STRUCTURES FOR LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 2 LYS A 41 -67.22 63.11 REMARK 500 2 VAL A 55 -23.57 -39.87 REMARK 500 2 ILE A 84 174.43 -59.15 REMARK 500 3 ASP A 48 26.20 -143.72 REMARK 500 3 ASN A 70 18.08 57.72 REMARK 500 3 ASN A 103 62.88 -115.69 REMARK 500 4 ASP A 48 64.20 -108.86 REMARK 500 5 LYS A 43 68.10 61.44 REMARK 500 5 GLU A 44 29.13 38.46 REMARK 500 5 ASP A 48 26.42 -164.83 REMARK 500 5 GLU A 71 66.67 -61.43 REMARK 500 5 ASN A 103 -127.03 46.53 REMARK 500 5 LYS A 105 12.81 56.50 REMARK 500 6 GLU A 44 140.95 57.09 REMARK 500 6 VAL A 46 156.93 -35.60 REMARK 500 6 VAL A 58 -19.95 -44.60 REMARK 500 7 GLN A 42 -111.34 -171.61 REMARK 500 7 ASN A 107 -135.87 45.12 REMARK 500 8 LYS A 43 -69.43 62.85 REMARK 500 9 LEU A 78 -70.48 -38.65 REMARK 500 9 ARG A 104 -18.18 71.48 REMARK 500 10 LYS A 43 -119.86 57.45 REMARK 500 10 VAL A 57 -19.46 -48.02 REMARK 500 10 ARG A 104 66.35 -115.20 REMARK 500 11 VAL A 58 -21.51 -39.71 REMARK 500 11 LYS A 105 -166.20 51.88 REMARK 500 11 VAL A 106 12.64 47.63 REMARK 500 12 LYS A 43 65.44 60.22 REMARK 500 12 ASP A 48 -52.46 -173.62 REMARK 500 12 ASN A 107 -68.84 64.56 REMARK 500 13 GLU A 44 -102.05 -57.59 REMARK 500 13 ARG A 104 71.97 52.16 REMARK 500 13 VAL A 106 68.35 31.17 REMARK 500 14 ASP A 48 -65.72 -142.97 REMARK 500 14 ASN A 70 60.25 60.06 REMARK 500 14 ARG A 104 160.41 -45.37 REMARK 500 14 LYS A 105 -153.23 38.92 REMARK 500 15 GLN A 42 -165.76 52.89 REMARK 500 15 GLU A 71 17.51 42.83 REMARK 500 15 SER A 74 -170.61 -63.77 REMARK 500 15 LYS A 105 69.14 -60.07 REMARK 500 16 ASN A 103 -178.14 55.23 REMARK 500 16 ARG A 104 -90.19 -102.14 REMARK 500 16 LYS A 105 24.77 -160.63 REMARK 500 17 ALA A 45 29.11 -71.12 REMARK 500 17 ASN A 70 18.72 50.92 REMARK 500 17 GLU A 71 -114.80 36.17 REMARK 500 17 ILE A 84 -179.34 -61.71 REMARK 500 17 ASN A 103 15.04 58.19 REMARK 500 17 VAL A 106 52.51 73.47 REMARK 500 REMARK 500 THIS ENTRY HAS 60 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34112 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE OF COMGC FROM STREPTOCOCCUS PNEUMONIAE DBREF1 5NCA A 40 108 UNP A0A0Z7FCS2_STREE DBREF2 5NCA A A0A0Z7FCS2 40 108 SEQRES 1 A 69 THR LYS GLN LYS GLU ALA VAL ASN ASP LYS GLY LYS ALA SEQRES 2 A 69 ALA VAL VAL LYS VAL VAL GLU SER GLN ALA GLU LEU TYR SEQRES 3 A 69 SER LEU GLU LYS ASN GLU ASP ALA SER LEU ARG LYS LEU SEQRES 4 A 69 GLN ALA ASP GLY ARG ILE THR GLU GLU GLN ALA LYS ALA SEQRES 5 A 69 TYR LYS GLU TYR ASN ASP LYS ASN GLY GLY ALA ASN ARG SEQRES 6 A 69 LYS VAL ASN ASP HELIX 1 AA1 VAL A 55 ASN A 70 1 16 HELIX 2 AA2 SER A 74 GLY A 82 1 9 HELIX 3 AA3 THR A 85 LYS A 90 1 6 HELIX 4 AA4 TYR A 92 GLY A 100 1 9 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1