HEADER RNA 12-MAR-17 5NEW TITLE RNA-RNA BASE STACKING IN THE CRYSTAL STRUCTURE OF AN HFQ6:RNA DIMER COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA-BINDING PROTEIN HFQ; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: RNA (5'-R(P*AP*AP*AP*AP*AP*A)-3'); COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: RNA (5'-R(P*UP*U)-3'); COMPND 11 CHAIN: C SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI S88; SOURCE 3 ORGANISM_TAXID: 585035; SOURCE 4 GENE: HFQ, ECS88_4758; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 10 ORGANISM_TAXID: 562; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 13 ORGANISM_TAXID: 562 KEYWDS HFQ SRNA RNA-RNA INTERACTION BASE STACKING, RNA EXPDTA X-RAY DIFFRACTION AUTHOR E.C.SCHULZ,O.BARABAS REVDAT 2 16-OCT-19 5NEW 1 REMARK REVDAT 1 04-OCT-17 5NEW 0 JRNL AUTH E.C.SCHULZ,M.SEILER,C.ZULIANI,F.VOIGT,V.RYBIN,V.POGENBERG, JRNL AUTH 2 N.MUCKE,M.WILMANNS,T.J.GIBSON,O.BARABAS JRNL TITL INTERMOLECULAR BASE STACKING MEDIATES RNA-RNA INTERACTION IN JRNL TITL 2 A CRYSTAL STRUCTURE OF THE RNA CHAPERONE HFQ. JRNL REF SCI REP V. 7 9903 2017 JRNL REFN ESSN 2045-2322 JRNL PMID 28852099 JRNL DOI 10.1038/S41598-017-10085-8 REMARK 2 REMARK 2 RESOLUTION. 2.51 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.3_928 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.51 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 3 NUMBER OF REFLECTIONS : 6816 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 341 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.6063 - 3.1628 0.99 3387 178 0.1863 0.2363 REMARK 3 2 3.1628 - 2.5105 0.94 3088 163 0.2233 0.2920 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.39 REMARK 3 B_SOL : 44.33 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.650 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -10.63520 REMARK 3 B22 (A**2) : -10.63520 REMARK 3 B33 (A**2) : 21.27040 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 1252 REMARK 3 ANGLE : 1.095 1733 REMARK 3 CHIRALITY : 0.067 210 REMARK 3 PLANARITY : 0.006 187 REMARK 3 DIHEDRAL : 14.530 483 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5NEW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1200003993. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-DEC-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM30A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979681 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6816 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.510 REMARK 200 RESOLUTION RANGE LOW (A) : 40.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.0300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M PHOSPHATE-CITRATE BUFFER PH 4.2, REMARK 280 27% PEG 1000, AND 0.2 M LISO4, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 33.44000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 19.30659 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 75.90667 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 33.44000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 19.30659 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 75.90667 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 33.44000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 19.30659 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 75.90667 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 33.44000 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 19.30659 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 75.90667 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 33.44000 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 19.30659 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 75.90667 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 33.44000 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 19.30659 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 75.90667 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 38.61319 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 151.81333 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 38.61319 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 151.81333 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 38.61319 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 151.81333 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 38.61319 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 151.81333 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 38.61319 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 151.81333 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 38.61319 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 151.81333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 20800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -293.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, H, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 100.32000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 57.91978 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 115.83956 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 LYS A 3 REMARK 465 GLY A 4 REMARK 465 SER A 69 REMARK 465 HIS A 70 REMARK 465 HIS A 71 REMARK 465 SER A 72 REMARK 465 ASN A 73 REMARK 465 ASN A 74 REMARK 465 ALA A 75 REMARK 465 GLY A 76 REMARK 465 GLY A 77 REMARK 465 GLY A 78 REMARK 465 THR A 79 REMARK 465 SER A 80 REMARK 465 SER A 81 REMARK 465 ASN A 82 REMARK 465 TYR A 83 REMARK 465 HIS A 84 REMARK 465 HIS A 85 REMARK 465 GLY A 86 REMARK 465 SER A 87 REMARK 465 SER A 88 REMARK 465 ALA A 89 REMARK 465 GLN A 90 REMARK 465 ASN A 91 REMARK 465 THR A 92 REMARK 465 SER A 93 REMARK 465 ALA A 94 REMARK 465 GLN A 95 REMARK 465 GLN A 96 REMARK 465 ASP A 97 REMARK 465 SER A 98 REMARK 465 GLU A 99 REMARK 465 GLU A 100 REMARK 465 THR A 101 REMARK 465 GLU A 102 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 LYS B 3 REMARK 465 GLY B 4 REMARK 465 SER B 69 REMARK 465 HIS B 70 REMARK 465 HIS B 71 REMARK 465 SER B 72 REMARK 465 ASN B 73 REMARK 465 ASN B 74 REMARK 465 ALA B 75 REMARK 465 GLY B 76 REMARK 465 GLY B 77 REMARK 465 GLY B 78 REMARK 465 THR B 79 REMARK 465 SER B 80 REMARK 465 SER B 81 REMARK 465 ASN B 82 REMARK 465 TYR B 83 REMARK 465 HIS B 84 REMARK 465 HIS B 85 REMARK 465 GLY B 86 REMARK 465 SER B 87 REMARK 465 SER B 88 REMARK 465 ALA B 89 REMARK 465 GLN B 90 REMARK 465 ASN B 91 REMARK 465 THR B 92 REMARK 465 SER B 93 REMARK 465 ALA B 94 REMARK 465 GLN B 95 REMARK 465 GLN B 96 REMARK 465 ASP B 97 REMARK 465 SER B 98 REMARK 465 GLU B 99 REMARK 465 GLU B 100 REMARK 465 THR B 101 REMARK 465 GLU B 102 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B 66 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 37 OG SER B 51 1.93 REMARK 500 O HOH A 313 O HOH A 317 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 P A H 4 O3' A H 9 3675 1.62 REMARK 500 O5' A H 4 O3' A H 9 3675 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 6 -178.83 -174.67 REMARK 500 LEU A 7 -28.09 -147.32 REMARK 500 ASP A 40 -148.00 -130.87 REMARK 500 ASN A 48 -114.49 -121.36 REMARK 500 SER A 60 -72.14 -78.60 REMARK 500 LEU B 7 -31.56 -138.02 REMARK 500 ASP B 40 -153.09 -133.73 REMARK 500 ASN B 48 -103.63 -135.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 203 DBREF 5NEW A 1 102 UNP B7MKX6 HFQ_ECO45 1 102 DBREF 5NEW B 1 102 UNP B7MKX6 HFQ_ECO45 1 102 DBREF 5NEW H 4 9 PDB 5NEW 5NEW 4 9 DBREF 5NEW C 0 1 PDB 5NEW 5NEW 0 1 SEQRES 1 A 102 MET ALA LYS GLY GLN SER LEU GLN ASP PRO PHE LEU ASN SEQRES 2 A 102 ALA LEU ARG ARG GLU ARG VAL PRO VAL SER ILE TYR LEU SEQRES 3 A 102 VAL ASN GLY ILE LYS LEU GLN GLY GLN ILE GLU SER PHE SEQRES 4 A 102 ASP GLN PHE VAL ILE LEU LEU LYS ASN THR VAL SER GLN SEQRES 5 A 102 MET VAL TYR LYS HIS ALA ILE SER THR VAL VAL PRO SER SEQRES 6 A 102 ARG PRO VAL SER HIS HIS SER ASN ASN ALA GLY GLY GLY SEQRES 7 A 102 THR SER SER ASN TYR HIS HIS GLY SER SER ALA GLN ASN SEQRES 8 A 102 THR SER ALA GLN GLN ASP SER GLU GLU THR GLU SEQRES 1 B 102 MET ALA LYS GLY GLN SER LEU GLN ASP PRO PHE LEU ASN SEQRES 2 B 102 ALA LEU ARG ARG GLU ARG VAL PRO VAL SER ILE TYR LEU SEQRES 3 B 102 VAL ASN GLY ILE LYS LEU GLN GLY GLN ILE GLU SER PHE SEQRES 4 B 102 ASP GLN PHE VAL ILE LEU LEU LYS ASN THR VAL SER GLN SEQRES 5 B 102 MET VAL TYR LYS HIS ALA ILE SER THR VAL VAL PRO SER SEQRES 6 B 102 ARG PRO VAL SER HIS HIS SER ASN ASN ALA GLY GLY GLY SEQRES 7 B 102 THR SER SER ASN TYR HIS HIS GLY SER SER ALA GLN ASN SEQRES 8 B 102 THR SER ALA GLN GLN ASP SER GLU GLU THR GLU SEQRES 1 H 6 A A A A A A SEQRES 1 C 2 U U HET SO4 A 201 5 HET SO4 A 202 5 HET SO4 B 201 5 HET SO4 B 202 5 HET SO4 B 203 5 HETNAM SO4 SULFATE ION FORMUL 5 SO4 5(O4 S 2-) FORMUL 10 HOH *44(H2 O) HELIX 1 AA1 LEU A 7 GLU A 18 1 12 HELIX 2 AA2 LEU B 7 GLU B 18 1 12 SHEET 1 AA110 SER A 51 TYR A 55 0 SHEET 2 AA110 VAL A 43 LYS A 47 -1 N ILE A 44 O VAL A 54 SHEET 3 AA110 LYS A 31 PHE A 39 -1 N SER A 38 O LEU A 45 SHEET 4 AA110 PRO A 21 LEU A 26 -1 N ILE A 24 O LEU A 32 SHEET 5 AA110 ILE A 59 PRO A 64 -1 O VAL A 63 N SER A 23 SHEET 6 AA110 SER B 51 TYR B 55 -1 O TYR B 55 N SER A 60 SHEET 7 AA110 VAL B 43 LYS B 47 -1 N ILE B 44 O VAL B 54 SHEET 8 AA110 LYS B 31 PHE B 39 -1 N SER B 38 O LEU B 45 SHEET 9 AA110 PRO B 21 LEU B 26 -1 N ILE B 24 O LEU B 32 SHEET 10 AA110 ILE B 59 PRO B 64 -1 O VAL B 63 N SER B 23 SITE 1 AC1 3 SER A 23 TYR A 25 HOH A 302 SITE 1 AC2 2 ARG A 16 ARG A 17 SITE 1 AC3 5 PRO A 67 LYS B 47 VAL B 50 SER B 51 SITE 2 AC3 5 HOH B 303 SITE 1 AC4 5 SER B 23 TYR B 25 LYS B 31 HOH B 309 SITE 2 AC4 5 HOH B 310 SITE 1 AC5 2 ASN B 13 ARG B 17 CRYST1 66.880 66.880 227.720 90.00 90.00 120.00 H 3 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014952 0.008633 0.000000 0.00000 SCALE2 0.000000 0.017265 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004391 0.00000