HEADER MEMBRANE PROTEIN 13-MAR-17 5NF6 TITLE STRUCTURE OF GLUK3 LIGAND-BINDING DOMAIN (S1S2) IN COMPLEX WITH CIP-AS TITLE 2 AT 2.55 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTAMATE RECEPTOR IONOTROPIC, KAINATE 3,GLUTAMATE RECEPTOR COMPND 3 IONOTROPIC, KAINATE 3; COMPND 4 CHAIN: B, A; COMPND 5 SYNONYM: GLUK3,GLUTAMATE RECEPTOR 7,GLUR7,GLUK3,GLUTAMATE RECEPTOR 7, COMPND 6 GLUR7; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: THE PROTEIN CRYSTALLIZED IS THE EXTRACELLULAR LIGAND- COMPND 9 BINDING DOMAIN OF GLUK3. TRANSMEMBRANE REGIONS WERE REPLACED WITH A COMPND 10 GLY-THR LINKER (RESIDUES 117-118). THE SEQUENCE MATCHES COMPND 11 DISCONTINOUSLY WITH REFERENCE DATABASE (432-546, 669-806). THE FIRST COMPND 12 THREE RESIDUES GLY-PRO-GLY ARE CLONING REMNANTS. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: GRIK3, GLUR7; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ORIGAMI 2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: POPINJ KEYWDS IONOTROPIC GLUTAMATE RECEPTOR, KAINATE RECEPTOR, LIGAND-BINDING KEYWDS 2 DOMAIN, GLUK3, GLUR7, AGONIST, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.FRYDENVANG,R.VENSKUTONYTE,T.S.THORSEN,J.S.KASTRUP REVDAT 3 17-JAN-24 5NF6 1 LINK REVDAT 2 27-SEP-17 5NF6 1 JRNL REVDAT 1 26-JUL-17 5NF6 0 JRNL AUTH S.MLLERUD,A.PINTO,L.MARCONI,K.FRYDENVANG,T.S.THORSEN, JRNL AUTH 2 S.LAULUMAA,R.VENSKUTONYTE,S.WINTHER,A.M.C.MORAL,L.TAMBORINI, JRNL AUTH 3 P.CONTI,D.S.PICKERING,J.S.KASTRUP JRNL TITL STRUCTURE AND AFFINITY OF TWO BICYCLIC GLUTAMATE ANALOGUES JRNL TITL 2 AT AMPA AND KAINATE RECEPTORS. JRNL REF ACS CHEM NEUROSCI V. 8 2056 2017 JRNL REFN ESSN 1948-7193 JRNL PMID 28691798 JRNL DOI 10.1021/ACSCHEMNEURO.7B00201 REMARK 2 REMARK 2 RESOLUTION. 2.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.48 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.290 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 21573 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 1106 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.4820 - 5.0975 1.00 2714 149 0.1812 0.2350 REMARK 3 2 5.0975 - 4.0470 1.00 2596 147 0.1555 0.1967 REMARK 3 3 4.0470 - 3.5358 1.00 2534 154 0.1933 0.2348 REMARK 3 4 3.5358 - 3.2126 1.00 2555 137 0.2142 0.2373 REMARK 3 5 3.2126 - 2.9824 1.00 2518 140 0.2375 0.2930 REMARK 3 6 2.9824 - 2.8066 1.00 2520 124 0.2414 0.3102 REMARK 3 7 2.8066 - 2.6661 1.00 2517 123 0.2435 0.2800 REMARK 3 8 2.6661 - 2.5500 1.00 2513 132 0.2535 0.3200 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.750 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 38.96 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 4154 REMARK 3 ANGLE : 0.528 5595 REMARK 3 CHIRALITY : 0.039 619 REMARK 3 PLANARITY : 0.003 705 REMARK 3 DIHEDRAL : 11.625 2503 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 4 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.4027 6.7773 97.8277 REMARK 3 T TENSOR REMARK 3 T11: 0.3216 T22: 0.3197 REMARK 3 T33: 0.1683 T12: -0.0852 REMARK 3 T13: -0.0075 T23: -0.0712 REMARK 3 L TENSOR REMARK 3 L11: 5.6877 L22: 3.5722 REMARK 3 L33: 1.9667 L12: -0.6500 REMARK 3 L13: -0.3695 L23: -0.0378 REMARK 3 S TENSOR REMARK 3 S11: -0.2517 S12: 0.5256 S13: -0.0006 REMARK 3 S21: 0.0117 S22: 0.1129 S23: -0.2081 REMARK 3 S31: -0.0331 S32: 0.3716 S33: 0.1387 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 48 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.7476 18.9116 104.8737 REMARK 3 T TENSOR REMARK 3 T11: 0.3939 T22: 0.2586 REMARK 3 T33: 0.3084 T12: -0.0210 REMARK 3 T13: -0.1007 T23: -0.0781 REMARK 3 L TENSOR REMARK 3 L11: 4.0633 L22: 2.2672 REMARK 3 L33: 4.0112 L12: -0.6783 REMARK 3 L13: -0.4609 L23: 0.4124 REMARK 3 S TENSOR REMARK 3 S11: -0.3143 S12: -0.0374 S13: 0.7527 REMARK 3 S21: 0.1155 S22: 0.1611 S23: -0.0381 REMARK 3 S31: -0.5936 S32: 0.1577 S33: 0.1272 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 123 THROUGH 238 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.5246 15.6072 116.0349 REMARK 3 T TENSOR REMARK 3 T11: 0.4247 T22: 0.4852 REMARK 3 T33: 0.3091 T12: 0.0656 REMARK 3 T13: -0.0440 T23: -0.1733 REMARK 3 L TENSOR REMARK 3 L11: 3.5016 L22: 1.5671 REMARK 3 L33: 3.0282 L12: -0.3463 REMARK 3 L13: -0.4191 L23: 0.1775 REMARK 3 S TENSOR REMARK 3 S11: -0.3564 S12: -0.8999 S13: 0.5136 REMARK 3 S21: 0.4718 S22: 0.1439 S23: 0.0144 REMARK 3 S31: -0.1779 S32: -0.0571 S33: 0.1797 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 239 THROUGH 255 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.7982 -1.7980 105.1776 REMARK 3 T TENSOR REMARK 3 T11: 0.3769 T22: 0.2238 REMARK 3 T33: 0.3017 T12: -0.0779 REMARK 3 T13: 0.0723 T23: -0.0451 REMARK 3 L TENSOR REMARK 3 L11: 5.6023 L22: 7.4310 REMARK 3 L33: 6.3401 L12: 2.2715 REMARK 3 L13: -1.2300 L23: 5.3493 REMARK 3 S TENSOR REMARK 3 S11: -0.2182 S12: -0.4625 S13: -0.2640 REMARK 3 S21: -0.0299 S22: -0.4441 S23: -0.1724 REMARK 3 S31: 1.0664 S32: -0.3785 S33: 0.3433 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.1685 -20.6654 95.2045 REMARK 3 T TENSOR REMARK 3 T11: 0.4248 T22: 0.3832 REMARK 3 T33: 0.9342 T12: -0.1126 REMARK 3 T13: 0.0449 T23: -0.1578 REMARK 3 L TENSOR REMARK 3 L11: 1.5814 L22: 1.6561 REMARK 3 L33: 3.5162 L12: 0.8241 REMARK 3 L13: 0.5981 L23: -0.4482 REMARK 3 S TENSOR REMARK 3 S11: -0.1200 S12: 0.2997 S13: -1.2022 REMARK 3 S21: -0.0601 S22: 0.1014 S23: 0.9637 REMARK 3 S31: 0.6988 S32: -0.4510 S33: 0.1744 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 48 THROUGH 132 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.3745 -7.9041 106.5355 REMARK 3 T TENSOR REMARK 3 T11: 0.3965 T22: 0.3194 REMARK 3 T33: 0.3095 T12: -0.0973 REMARK 3 T13: 0.1703 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 4.3934 L22: 2.0800 REMARK 3 L33: 2.7879 L12: -0.5072 REMARK 3 L13: -1.1830 L23: 0.1290 REMARK 3 S TENSOR REMARK 3 S11: 0.1628 S12: -0.7742 S13: -0.2504 REMARK 3 S21: 0.6408 S22: 0.0105 S23: 0.3699 REMARK 3 S31: 0.1168 S32: 0.1236 S33: 0.0136 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 133 THROUGH 238 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.5405 -2.4016 106.2381 REMARK 3 T TENSOR REMARK 3 T11: 0.4129 T22: 0.3623 REMARK 3 T33: 0.4300 T12: -0.1155 REMARK 3 T13: 0.1751 T23: -0.0321 REMARK 3 L TENSOR REMARK 3 L11: 4.7420 L22: 2.2482 REMARK 3 L33: 2.2865 L12: -0.9741 REMARK 3 L13: -1.5622 L23: -0.0318 REMARK 3 S TENSOR REMARK 3 S11: 0.3008 S12: -0.6586 S13: 0.1446 REMARK 3 S21: 0.3765 S22: -0.0973 S23: 0.5311 REMARK 3 S31: -0.3830 S32: 0.1086 S33: -0.1440 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 239 THROUGH 256 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.0138 -5.2000 88.3385 REMARK 3 T TENSOR REMARK 3 T11: 0.2687 T22: 0.6787 REMARK 3 T33: 0.6366 T12: 0.1505 REMARK 3 T13: -0.0255 T23: -0.0869 REMARK 3 L TENSOR REMARK 3 L11: 0.0282 L22: 3.4910 REMARK 3 L33: 4.4337 L12: 0.0908 REMARK 3 L13: 0.1929 L23: -0.7285 REMARK 3 S TENSOR REMARK 3 S11: 0.8593 S12: 0.8148 S13: -0.8756 REMARK 3 S21: -0.1356 S22: -0.3938 S23: 1.3395 REMARK 3 S31: -0.7902 S32: -1.0180 S33: 0.1821 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESSEQ 5:8 OR (RESID 9 AND REMARK 3 (NAME N OR NAME C OR NAME O OR NAME CB OR REMARK 3 NAME OG1 OR NAME CG2 OR NAME H OR NAME HA REMARK 3 OR NAME HB OR NAME HG1 OR NAME HG21 OR REMARK 3 NAME HG22 OR NAME HG23)) OR RESSEQ 10 OR REMARK 3 (RESID 11 AND (NAME N OR NAME C OR NAME O REMARK 3 OR NAME CB OR NAME CG OR NAME CD1 OR NAME REMARK 3 CD2 OR NAME H OR NAME HA OR NAME HB2 OR REMARK 3 NAME HB3 OR NAME HG OR NAME HD11 OR NAME REMARK 3 HD12 OR NAME HD13 OR NAME HD21 OR NAME REMARK 3 HD22 OR NAME HD23)) OR RESSEQ 12:17 OR REMARK 3 (RESID 18 AND (NAME N OR NAME C OR NAME O REMARK 3 OR NAME CB OR NAME CG OR NAME SD OR NAME REMARK 3 CE OR NAME H OR NAME HA OR NAME HB2 OR REMARK 3 NAME HB3 OR NAME HG2 OR NAME HG3 OR NAME REMARK 3 HE1 OR NAME HE2 OR NAME HE3)) OR RESSEQ REMARK 3 19:20 OR RESSEQ 22:23 OR RESSEQ 25:26 OR REMARK 3 RESSEQ 28:44 OR (RESID 45 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB OR REMARK 3 NAME CG OR NAME ND1 OR NAME CD2 OR NAME REMARK 3 CE1 OR NAME NE2 OR NAME H OR NAME HA OR REMARK 3 NAME HB2 OR NAME HB3 OR NAME HD2 OR NAME REMARK 3 HE1)) OR RESSEQ 46:50 OR (RESID 51 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB OR NAME CG OR NAME CD2 OR NAME REMARK 3 CE2 OR NAME CZ OR NAME OH OR NAME H OR REMARK 3 NAME HA OR NAME HB2 OR NAME HB3 OR NAME REMARK 3 HD2 OR NAME HE2 OR NAME HH )) OR RESSEQ REMARK 3 53:56 OR (RESID 57 AND (NAME N OR NAME C REMARK 3 OR NAME O OR NAME CB OR NAME CG OR NAME REMARK 3 CD OR NAME OE1 OR NAME OE2 OR NAME H OR REMARK 3 NAME HA OR NAME HB2 OR NAME HB3 OR NAME REMARK 3 HG2 OR NAME HG3)) OR RESSEQ 58:59 OR REMARK 3 RESSEQ 61:65 OR RESSEQ 68:90 OR (RESID 91 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB OR NAME CG1 OR NAME CG2 OR REMARK 3 NAME H OR NAME HA OR NAME HB OR NAME HG12 REMARK 3 OR NAME HG13 OR NAME HG21 OR NAME HG22 OR REMARK 3 NAME HG23 OR NAME HD11 OR NAME HD12 OR REMARK 3 NAME HD13)) OR RESSEQ 92 OR RESSEQ 94:96 REMARK 3 OR RESSEQ 98:114 OR (RESID 115 AND (NAME REMARK 3 N OR NAME C OR NAME O OR NAME CB OR NAME REMARK 3 CG OR NAME CD OR NAME NE OR NAME CZ OR REMARK 3 NAME NH1 OR NAME NH2 OR NAME H OR NAME HA REMARK 3 OR NAME HB2 OR NAME HB3 OR NAME HG2 OR REMARK 3 NAME HG3 OR NAME HD2 OR NAME HD3 OR NAME REMARK 3 HE OR NAME HH11 OR NAME HH12 OR NAME HH21 REMARK 3 OR NAME HH22)) OR RESSEQ 116:123 OR REMARK 3 (RESID 124 AND (NAME N OR NAME C OR NAME REMARK 3 O OR NAME CB OR NAME CG OR NAME OD1 OR REMARK 3 NAME OD2 OR NAME H OR NAME HA OR NAME HB2 REMARK 3 OR NAME HB3)) OR RESSEQ 125 OR RESSEQ 127 REMARK 3 OR RESSEQ 129 OR RESSEQ 131:132 OR (RESID REMARK 3 133 AND (NAME N OR NAME C OR NAME O OR REMARK 3 NAME CB OR NAME CG OR NAME CD OR NAME OE1 REMARK 3 OR NAME OE2 OR NAME H OR NAME HA OR NAME REMARK 3 HB2 OR NAME HB3 OR NAME HG2 OR NAME HG3)) REMARK 3 OR RESSEQ 135:137 OR RESSEQ 139:145 OR REMARK 3 (RESID 146 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB OR NAME CG OR NAME REMARK 3 CD1 OR NAME CE1 OR NAME CZ OR NAME H OR REMARK 3 NAME HA OR NAME HB2 OR NAME HB3 OR NAME REMARK 3 HD1 OR NAME HD2 OR NAME HE1 OR NAME HE2 REMARK 3 OR NAME HZ )) OR RESSEQ 147:149 OR RESSEQ REMARK 3 151:155 OR RESSEQ 157:160 OR (RESID 161 REMARK 3 AND (NAME N OR NAME C OR NAME O OR NAME REMARK 3 CB OR NAME CG OR NAME SD OR NAME CE OR REMARK 3 NAME H OR NAME HA OR NAME HB2 OR NAME HB3 REMARK 3 OR NAME HG2 OR NAME HG3 OR NAME HE1 OR REMARK 3 NAME HE2 OR NAME HE3)) OR (RESID 162 AND REMARK 3 (NAME O OR NAME N OR NAME CA OR NAME C OR REMARK 3 NAME CB OR NAME OG OR NAME H OR NAME HA REMARK 3 OR NAME HB2 OR NAME HB3)) OR (RESID 163 REMARK 3 AND (NAME O OR NAME N OR NAME CA OR NAME REMARK 3 C OR NAME CB OR NAME OG OR NAME H OR NAME REMARK 3 HA OR NAME HB2 OR NAME HB3)) OR (RESID REMARK 3 164 AND (NAME O OR NAME CA OR NAME CB OR REMARK 3 NAME CG OR NAME CD OR NAME CE OR NAME NZ REMARK 3 OR NAME H OR NAME HA OR NAME HB2 OR NAME REMARK 3 HB3 OR NAME HG2 OR NAME HG3 OR NAME HD2 REMARK 3 OR NAME HD3 OR NAME HE2 OR NAME HE3 OR REMARK 3 NAME HZ1 OR NAME HZ2 OR NAME HZ3)) OR REMARK 3 (RESID 165 AND (NAME O OR NAME N OR NAME REMARK 3 CA OR NAME C OR NAME CB OR NAME CG OR REMARK 3 NAME CD OR NAME HA OR NAME HB2 OR NAME REMARK 3 HB3 OR NAME HG2 OR NAME HG3 OR NAME HD2)) REMARK 3 OR (RESID 166 AND (NAME O OR NAME N OR REMARK 3 NAME CA OR NAME C OR NAME CB OR NAME OG REMARK 3 OR NAME H OR NAME HA OR NAME HB2 OR NAME REMARK 3 HB3)) OR RESSEQ 167:169 OR (RESID 170 AND REMARK 3 (NAME N OR NAME C OR NAME O OR NAME CB OR REMARK 3 NAME CG OR NAME CD OR NAME CE OR NAME NZ REMARK 3 OR NAME H OR NAME HA OR NAME HB2 OR NAME REMARK 3 HB3 OR NAME HG2 OR NAME HG3 OR NAME HD2 REMARK 3 OR NAME HD3 OR NAME HE2 OR NAME HE3 OR REMARK 3 NAME HZ1 OR NAME HZ2 OR NAME HZ3)) OR REMARK 3 RESSEQ 171:172 OR (RESID 173 AND (NAME N REMARK 3 OR NAME C OR NAME O OR NAME CB OR NAME CG REMARK 3 OR NAME CD OR NAME OE1 OR NAME OE2 OR REMARK 3 NAME H OR NAME HA OR NAME HB2 OR NAME HB3 REMARK 3 OR NAME HG2 OR NAME HG3)) OR (RESID 174 REMARK 3 AND (NAME N OR NAME C OR NAME O OR NAME REMARK 3 CB OR NAME CG OR NAME CD OR NAME OE1 OR REMARK 3 NAME OE2 OR NAME H OR NAME HA OR NAME HB2 REMARK 3 OR NAME HB3 OR NAME HG2 OR NAME HG3)) OR REMARK 3 RESSEQ 175:183 OR (RESID 184 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 OR NAME CG OR NAME CD2 OR NAME CE2 OR REMARK 3 NAME CZ OR NAME OH OR NAME H OR NAME HA REMARK 3 OR NAME HB2 OR NAME HB3 OR NAME HD2 OR REMARK 3 NAME HE2 OR NAME HH )) OR RESSEQ 185:197 REMARK 3 OR RESSEQ 199 OR RESSEQ 201 OR RESSEQ 203: REMARK 3 216 OR (RESID 217 AND (NAME N OR NAME CA REMARK 3 OR NAME C OR NAME O OR NAME CB OR NAME REMARK 3 CG1 OR NAME CD1 OR NAME H OR NAME HA OR REMARK 3 NAME HB OR NAME HG12 OR NAME HG13 OR NAME REMARK 3 HG21 OR NAME HG22 OR NAME HG23 OR NAME REMARK 3 HD11 OR NAME HD12 OR NAME HD13)) OR REMARK 3 RESSEQ 218:228 OR (RESID 229 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 OR NAME CG1 OR NAME CD1 OR NAME H OR NAME REMARK 3 HA OR NAME HB OR NAME HG12 OR NAME HG13 REMARK 3 OR NAME HG21 OR NAME HG22 OR NAME HG23 OR REMARK 3 NAME HD11 OR NAME HD12 OR NAME HD13)) OR REMARK 3 RESSEQ 230:236 OR RESSEQ 239 OR (RESID REMARK 3 240 AND (NAME N OR NAME CA OR NAME C OR REMARK 3 NAME O OR NAME CB OR NAME CG OR NAME OD1 REMARK 3 OR NAME OD2 OR NAME HB2 OR NAME HB3)) OR REMARK 3 RESSEQ 241:242 OR (RESID 243 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 OR NAME CG OR NAME ND1 OR NAME CD2 OR REMARK 3 NAME CE1 OR NAME NE2 OR NAME HB2 OR NAME REMARK 3 HB3 OR NAME HD2 OR NAME HE1)) OR RESSEQ REMARK 3 245 OR RESSEQ 247:255)) REMARK 3 SELECTION : (CHAIN B AND (RESSEQ 5:8 OR (RESID 9 AND REMARK 3 (NAME N OR NAME C OR NAME O OR NAME CB OR REMARK 3 NAME OG1 OR NAME CG2 OR NAME H OR NAME HA REMARK 3 OR NAME HB OR NAME HG1 OR NAME HG21 OR REMARK 3 NAME HG22 OR NAME HG23)) OR RESSEQ 10 OR REMARK 3 (RESID 11 AND (NAME N OR NAME C OR NAME O REMARK 3 OR NAME CB OR NAME CG OR NAME CD1 OR NAME REMARK 3 CD2 OR NAME H OR NAME HA OR NAME HB2 OR REMARK 3 NAME HB3 OR NAME HG OR NAME HD11 OR NAME REMARK 3 HD12 OR NAME HD13 OR NAME HD21 OR NAME REMARK 3 HD22 OR NAME HD23)) OR RESSEQ 12:17 OR REMARK 3 (RESID 18 AND (NAME N OR NAME C OR NAME O REMARK 3 OR NAME CB OR NAME CG OR NAME SD OR NAME REMARK 3 CE OR NAME H OR NAME HA OR NAME HB2 OR REMARK 3 NAME HB3 OR NAME HG2 OR NAME HG3 OR NAME REMARK 3 HE1 OR NAME HE2 OR NAME HE3)) OR RESSEQ REMARK 3 19:20 OR RESSEQ 22:23 OR RESSEQ 25:26 OR REMARK 3 RESSEQ 28:44 OR (RESID 45 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB OR REMARK 3 NAME CG OR NAME ND1 OR NAME CD2 OR NAME REMARK 3 CE1 OR NAME NE2 OR NAME H OR NAME HA OR REMARK 3 NAME HB2 OR NAME HB3 OR NAME HD2 OR NAME REMARK 3 HE1)) OR RESSEQ 46:50 OR (RESID 51 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB OR NAME CG OR NAME CD2 OR NAME REMARK 3 CE2 OR NAME CZ OR NAME OH OR NAME H OR REMARK 3 NAME HA OR NAME HB2 OR NAME HB3 OR NAME REMARK 3 HD2 OR NAME HE2 OR NAME HH )) OR RESSEQ REMARK 3 53:56 OR (RESID 57 AND (NAME N OR NAME C REMARK 3 OR NAME O OR NAME CB OR NAME CG OR NAME REMARK 3 CD OR NAME OE1 OR NAME OE2 OR NAME H OR REMARK 3 NAME HA OR NAME HB2 OR NAME HB3 OR NAME REMARK 3 HG2 OR NAME HG3)) OR RESSEQ 58:59 OR REMARK 3 RESSEQ 61:65 OR RESSEQ 68:90 OR (RESID 91 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB OR NAME CG1 OR NAME CG2 OR REMARK 3 NAME H OR NAME HA OR NAME HB OR NAME HG12 REMARK 3 OR NAME HG13 OR NAME HG21 OR NAME HG22 OR REMARK 3 NAME HG23 OR NAME HD11 OR NAME HD12 OR REMARK 3 NAME HD13)) OR RESSEQ 92 OR RESSEQ 94:96 REMARK 3 OR RESSEQ 98:114 OR (RESID 115 AND (NAME REMARK 3 N OR NAME C OR NAME O OR NAME CB OR NAME REMARK 3 CG OR NAME CD OR NAME NE OR NAME CZ OR REMARK 3 NAME NH1 OR NAME NH2 OR NAME H OR NAME HA REMARK 3 OR NAME HB2 OR NAME HB3 OR NAME HG2 OR REMARK 3 NAME HG3 OR NAME HD2 OR NAME HD3 OR NAME REMARK 3 HE OR NAME HH11 OR NAME HH12 OR NAME HH21 REMARK 3 OR NAME HH22)) OR RESSEQ 116:123 OR REMARK 3 (RESID 124 AND (NAME N OR NAME C OR NAME REMARK 3 O OR NAME CB OR NAME CG OR NAME OD1 OR REMARK 3 NAME OD2 OR NAME H OR NAME HA OR NAME HB2 REMARK 3 OR NAME HB3)) OR RESSEQ 125 OR RESSEQ 127 REMARK 3 OR RESSEQ 129 OR RESSEQ 131:132 OR (RESID REMARK 3 133 AND (NAME N OR NAME C OR NAME O OR REMARK 3 NAME CB OR NAME CG OR NAME CD OR NAME OE1 REMARK 3 OR NAME OE2 OR NAME H OR NAME HA OR NAME REMARK 3 HB2 OR NAME HB3 OR NAME HG2 OR NAME HG3)) REMARK 3 OR RESSEQ 135:137 OR RESSEQ 139:145 OR REMARK 3 (RESID 146 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB OR NAME CG OR NAME REMARK 3 CD1 OR NAME CE1 OR NAME CZ OR NAME H OR REMARK 3 NAME HA OR NAME HB2 OR NAME HB3 OR NAME REMARK 3 HD1 OR NAME HD2 OR NAME HE1 OR NAME HE2 REMARK 3 OR NAME HZ )) OR RESSEQ 147:149 OR RESSEQ REMARK 3 151:155 OR RESSEQ 157:160 OR (RESID 161 REMARK 3 AND (NAME N OR NAME C OR NAME O OR NAME REMARK 3 CB OR NAME CG OR NAME SD OR NAME CE OR REMARK 3 NAME H OR NAME HA OR NAME HB2 OR NAME HB3 REMARK 3 OR NAME HG2 OR NAME HG3 OR NAME HE1 OR REMARK 3 NAME HE2 OR NAME HE3)) OR (RESID 162 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME CB REMARK 3 OR NAME OG OR NAME H OR NAME HA OR NAME REMARK 3 HB2 OR NAME HB3 OR NAME HG )) OR (RESID REMARK 3 163 AND (NAME N OR NAME CA OR NAME C OR REMARK 3 NAME CB OR NAME OG OR NAME H OR NAME HA REMARK 3 OR NAME HB2 OR NAME HB3 OR NAME HG )) OR REMARK 3 (RESID 164 AND (NAME N OR NAME C OR NAME REMARK 3 O OR NAME CA OR NAME CB OR NAME CG OR REMARK 3 NAME CD OR NAME CE OR NAME NZ OR NAME H REMARK 3 OR NAME HA OR NAME HB2 OR NAME HB3 OR REMARK 3 NAME HG2 OR NAME HG3 OR NAME HD2 OR NAME REMARK 3 HD3 OR NAME HE2 OR NAME HE3 OR NAME HZ1)) REMARK 3 OR (RESID 165 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME CB OR NAME CG OR NAME CD REMARK 3 OR NAME HA OR NAME HB2 OR NAME HB3 OR REMARK 3 NAME HG2 OR NAME HG3 OR NAME HD2 OR NAME REMARK 3 HD3)) OR (RESID 166 AND (NAME N OR NAME REMARK 3 CA OR NAME C OR NAME CB OR NAME OG OR REMARK 3 NAME H OR NAME HA OR NAME HB2 OR NAME HB3 REMARK 3 OR NAME HG )) OR RESSEQ 167:169 OR (RESID REMARK 3 170 AND (NAME N OR NAME C OR NAME O OR REMARK 3 NAME CB OR NAME CG OR NAME CD OR NAME CE REMARK 3 OR NAME NZ OR NAME H OR NAME HA OR NAME REMARK 3 HB2 OR NAME HB3 OR NAME HG2 OR NAME HG3 REMARK 3 OR NAME HD2 OR NAME HD3 OR NAME HE2 OR REMARK 3 NAME HE3 OR NAME HZ1 OR NAME HZ2 OR NAME REMARK 3 HZ3)) OR RESSEQ 171:172 OR (RESID 173 AND REMARK 3 (NAME N OR NAME C OR NAME O OR NAME CB OR REMARK 3 NAME CG OR NAME CD OR NAME OE1 OR NAME REMARK 3 OE2 OR NAME H OR NAME HA OR NAME HB2 OR REMARK 3 NAME HB3 OR NAME HG2 OR NAME HG3)) OR REMARK 3 (RESID 174 AND (NAME N OR NAME C OR NAME REMARK 3 O OR NAME CB OR NAME CG OR NAME CD OR REMARK 3 NAME OE1 OR NAME OE2 OR NAME H OR NAME HA REMARK 3 OR NAME HB2 OR NAME HB3 OR NAME HG2 OR REMARK 3 NAME HG3)) OR RESSEQ 175:183 OR (RESID REMARK 3 184 AND (NAME N OR NAME CA OR NAME C OR REMARK 3 NAME O OR NAME CB OR NAME CG OR NAME CD2 REMARK 3 OR NAME CE2 OR NAME CZ OR NAME OH OR NAME REMARK 3 H OR NAME HA OR NAME HB2 OR NAME HB3 OR REMARK 3 NAME HD2 OR NAME HE2 OR NAME HH )) OR REMARK 3 RESSEQ 185:197 OR RESSEQ 199 OR RESSEQ REMARK 3 201 OR RESSEQ 203:216 OR (RESID 217 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB OR NAME CG1 OR NAME CD1 OR NAME H REMARK 3 OR NAME HA OR NAME HB OR NAME HG12 OR REMARK 3 NAME HG13 OR NAME HG21 OR NAME HG22 OR REMARK 3 NAME HG23 OR NAME HD11 OR NAME HD12 OR REMARK 3 NAME HD13)) OR RESSEQ 218:228 OR (RESID REMARK 3 229 AND (NAME N OR NAME CA OR NAME C OR REMARK 3 NAME O OR NAME CB OR NAME CG1 OR NAME CD1 REMARK 3 OR NAME H OR NAME HA OR NAME HB OR NAME REMARK 3 HG12 OR NAME HG13 OR NAME HG21 OR NAME REMARK 3 HG22 OR NAME HG23 OR NAME HD11 OR NAME REMARK 3 HD12 OR NAME HD13)) OR RESSEQ 230:236 OR REMARK 3 RESSEQ 239 OR (RESID 240 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB OR REMARK 3 NAME CG OR NAME OD1 OR NAME OD2 OR NAME REMARK 3 HB2 OR NAME HB3)) OR RESSEQ 241:242 OR REMARK 3 (RESID 243 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB OR NAME CG OR NAME REMARK 3 ND1 OR NAME CD2 OR NAME CE1 OR NAME NE2 REMARK 3 OR NAME HB2 OR NAME HB3 OR NAME HD2 OR REMARK 3 NAME HE1)) OR RESSEQ 245 OR RESSEQ 247: REMARK 3 255)) REMARK 3 ATOM PAIRS NUMBER : 2429 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5NF6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1200004004. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX II REMARK 200 BEAMLINE : I911-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.22 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21596 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.550 REMARK 200 RESOLUTION RANGE LOW (A) : 47.210 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07600 REMARK 200 FOR THE DATA SET : 20.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : 0.48400 REMARK 200 R SYM FOR SHELL (I) : 0.48400 REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3U92 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG8000, 5 MM ZINC ACETATE, 0.1 M REMARK 280 TRIS PH 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.75800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 43.75800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 ZN ZN B 303 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B -1 REMARK 465 PRO B 0 REMARK 465 GLY B 1 REMARK 465 THR B 2 REMARK 465 ASN B 3 REMARK 465 PRO B 256 REMARK 465 GLY A -1 REMARK 465 PRO A 0 REMARK 465 GLY A 1 REMARK 465 THR A 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU B 13 115.37 -161.01 REMARK 500 ASP B 65 -157.35 -89.08 REMARK 500 PRO B 88 64.23 -69.27 REMARK 500 GLU A 13 115.07 -161.32 REMARK 500 PRO A 88 64.68 -69.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 42 OE1 REMARK 620 2 HIS B 45 NE2 89.4 REMARK 620 3 LYS B 241 NZ 147.7 118.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 303 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 80 ND1 REMARK 620 2 HIS B 80 ND1 0.0 REMARK 620 3 ACT B 305 O 69.1 69.1 REMARK 620 4 ACT B 305 OXT 92.7 92.7 49.4 REMARK 620 5 ACT B 305 O 70.0 70.0 124.7 161.7 REMARK 620 6 ACT B 305 OXT 116.0 116.0 161.7 142.4 49.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 303 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 93 NE2 REMARK 620 2 LYS B 97 NZ 86.8 REMARK 620 3 HIS A 80 ND1 54.0 93.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 240 OD1 REMARK 620 2 HIS B 243 ND1 117.2 REMARK 620 3 HIS A 93 ND1 100.7 101.3 REMARK 620 4 GLU A 96 OE1 118.7 103.0 115.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 45 NE2 REMARK 620 2 HOH A 431 O 100.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 194 OE1 REMARK 620 2 GLU A 194 OE2 56.8 REMARK 620 3 HIS A 243 NE2 158.8 142.6 REMARK 620 4 LYS A 246 NZ 87.8 134.1 71.4 REMARK 620 5 GLU A 247 OE2 166.3 127.7 15.1 81.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8VN B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8VN A 304 DBREF 5NF6 B 2 116 UNP P42264 GRIK3_RAT 432 546 DBREF 5NF6 B 119 256 UNP P42264 GRIK3_RAT 669 806 DBREF 5NF6 A 2 116 UNP P42264 GRIK3_RAT 432 546 DBREF 5NF6 A 119 256 UNP P42264 GRIK3_RAT 669 806 SEQADV 5NF6 GLY B -1 UNP P42264 CLONING ARTIFACT SEQADV 5NF6 PRO B 0 UNP P42264 CLONING ARTIFACT SEQADV 5NF6 GLY B 1 UNP P42264 CLONING ARTIFACT SEQADV 5NF6 GLY B 117 UNP P42264 LINKER SEQADV 5NF6 THR B 118 UNP P42264 LINKER SEQADV 5NF6 GLY A -1 UNP P42264 CLONING ARTIFACT SEQADV 5NF6 PRO A 0 UNP P42264 CLONING ARTIFACT SEQADV 5NF6 GLY A 1 UNP P42264 CLONING ARTIFACT SEQADV 5NF6 GLY A 117 UNP P42264 LINKER SEQADV 5NF6 THR A 118 UNP P42264 LINKER SEQRES 1 B 258 GLY PRO GLY THR ASN ARG SER LEU ILE VAL THR THR LEU SEQRES 2 B 258 LEU GLU GLU PRO PHE VAL MET PHE ARG LYS SER ASP ARG SEQRES 3 B 258 THR LEU TYR GLY ASN ASP ARG PHE GLU GLY TYR CYS ILE SEQRES 4 B 258 ASP LEU LEU LYS GLU LEU ALA HIS ILE LEU GLY PHE SER SEQRES 5 B 258 TYR GLU ILE ARG LEU VAL GLU ASP GLY LYS TYR GLY ALA SEQRES 6 B 258 GLN ASP ASP LYS GLY GLN TRP ASN GLY MET VAL LYS GLU SEQRES 7 B 258 LEU ILE ASP HIS LYS ALA ASP LEU ALA VAL ALA PRO LEU SEQRES 8 B 258 THR ILE THR HIS VAL ARG GLU LYS ALA ILE ASP PHE SER SEQRES 9 B 258 LYS PRO PHE MET THR LEU GLY VAL SER ILE LEU TYR ARG SEQRES 10 B 258 LYS GLY THR PRO ILE ASP SER ALA ASP ASP LEU ALA LYS SEQRES 11 B 258 GLN THR LYS ILE GLU TYR GLY ALA VAL LYS ASP GLY ALA SEQRES 12 B 258 THR MET THR PHE PHE LYS LYS SER LYS ILE SER THR PHE SEQRES 13 B 258 GLU LYS MET TRP ALA PHE MET SER SER LYS PRO SER ALA SEQRES 14 B 258 LEU VAL LYS ASN ASN GLU GLU GLY ILE GLN ARG THR LEU SEQRES 15 B 258 THR ALA ASP TYR ALA LEU LEU MET GLU SER THR THR ILE SEQRES 16 B 258 GLU TYR ILE THR GLN ARG ASN CYS ASN LEU THR GLN ILE SEQRES 17 B 258 GLY GLY LEU ILE ASP SER LYS GLY TYR GLY ILE GLY THR SEQRES 18 B 258 PRO MET GLY SER PRO TYR ARG ASP LYS ILE THR ILE ALA SEQRES 19 B 258 ILE LEU GLN LEU GLN GLU GLU ASP LYS LEU HIS ILE MET SEQRES 20 B 258 LYS GLU LYS TRP TRP ARG GLY SER GLY CYS PRO SEQRES 1 A 258 GLY PRO GLY THR ASN ARG SER LEU ILE VAL THR THR LEU SEQRES 2 A 258 LEU GLU GLU PRO PHE VAL MET PHE ARG LYS SER ASP ARG SEQRES 3 A 258 THR LEU TYR GLY ASN ASP ARG PHE GLU GLY TYR CYS ILE SEQRES 4 A 258 ASP LEU LEU LYS GLU LEU ALA HIS ILE LEU GLY PHE SER SEQRES 5 A 258 TYR GLU ILE ARG LEU VAL GLU ASP GLY LYS TYR GLY ALA SEQRES 6 A 258 GLN ASP ASP LYS GLY GLN TRP ASN GLY MET VAL LYS GLU SEQRES 7 A 258 LEU ILE ASP HIS LYS ALA ASP LEU ALA VAL ALA PRO LEU SEQRES 8 A 258 THR ILE THR HIS VAL ARG GLU LYS ALA ILE ASP PHE SER SEQRES 9 A 258 LYS PRO PHE MET THR LEU GLY VAL SER ILE LEU TYR ARG SEQRES 10 A 258 LYS GLY THR PRO ILE ASP SER ALA ASP ASP LEU ALA LYS SEQRES 11 A 258 GLN THR LYS ILE GLU TYR GLY ALA VAL LYS ASP GLY ALA SEQRES 12 A 258 THR MET THR PHE PHE LYS LYS SER LYS ILE SER THR PHE SEQRES 13 A 258 GLU LYS MET TRP ALA PHE MET SER SER LYS PRO SER ALA SEQRES 14 A 258 LEU VAL LYS ASN ASN GLU GLU GLY ILE GLN ARG THR LEU SEQRES 15 A 258 THR ALA ASP TYR ALA LEU LEU MET GLU SER THR THR ILE SEQRES 16 A 258 GLU TYR ILE THR GLN ARG ASN CYS ASN LEU THR GLN ILE SEQRES 17 A 258 GLY GLY LEU ILE ASP SER LYS GLY TYR GLY ILE GLY THR SEQRES 18 A 258 PRO MET GLY SER PRO TYR ARG ASP LYS ILE THR ILE ALA SEQRES 19 A 258 ILE LEU GLN LEU GLN GLU GLU ASP LYS LEU HIS ILE MET SEQRES 20 A 258 LYS GLU LYS TRP TRP ARG GLY SER GLY CYS PRO HET ZN B 301 1 HET ZN B 302 1 HET ZN B 303 1 HET 8VN B 304 14 HET ACT B 305 4 HET GOL B 306 6 HET GOL B 307 6 HET CL B 308 1 HET ZN A 301 1 HET ZN A 302 1 HET ZN A 303 1 HET 8VN A 304 14 HETNAM ZN ZINC ION HETNAM 8VN (3~{A}~{S},4~{S},6~{A}~{R})-4,5,6,6~{A}-TETRAHYDRO- HETNAM 2 8VN 3~{A}~{H}-PYRROLO[3,4-D][1,2]OXAZOLE-3,4-DICARBOXYLIC HETNAM 3 8VN ACID HETNAM ACT ACETATE ION HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 ZN 6(ZN 2+) FORMUL 6 8VN 2(C7 H8 N2 O5) FORMUL 7 ACT C2 H3 O2 1- FORMUL 8 GOL 2(C3 H8 O3) FORMUL 10 CL CL 1- FORMUL 15 HOH *87(H2 O) HELIX 1 AA1 TYR B 27 ASP B 30 5 4 HELIX 2 AA2 GLY B 34 GLY B 48 1 15 HELIX 3 AA3 ASN B 71 ASP B 79 1 9 HELIX 4 AA4 THR B 92 LYS B 97 1 6 HELIX 5 AA5 SER B 122 GLN B 129 1 8 HELIX 6 AA6 GLY B 140 LYS B 148 1 9 HELIX 7 AA7 ILE B 151 LYS B 164 1 14 HELIX 8 AA8 ASN B 171 ALA B 182 1 12 HELIX 9 AA9 SER B 190 GLN B 198 1 9 HELIX 10 AB1 TYR B 225 GLU B 239 1 15 HELIX 11 AB2 ASP B 240 TRP B 250 1 11 HELIX 12 AB3 TYR A 27 ASP A 30 5 4 HELIX 13 AB4 GLY A 34 GLY A 48 1 15 HELIX 14 AB5 ASN A 71 ASP A 79 1 9 HELIX 15 AB6 THR A 92 LYS A 97 1 6 HELIX 16 AB7 SER A 122 LYS A 128 1 7 HELIX 17 AB8 GLY A 140 LYS A 148 1 9 HELIX 18 AB9 ILE A 151 LYS A 164 1 14 HELIX 19 AC1 ASN A 171 ALA A 182 1 12 HELIX 20 AC2 SER A 190 GLN A 198 1 9 HELIX 21 AC3 PRO A 224 GLU A 239 1 16 HELIX 22 AC4 ASP A 240 TRP A 250 1 11 SHEET 1 AA1 3 TYR B 51 LEU B 55 0 SHEET 2 AA1 3 LEU B 6 THR B 10 1 N VAL B 8 O ARG B 54 SHEET 3 AA1 3 LEU B 84 ALA B 85 1 O LEU B 84 N THR B 9 SHEET 1 AA2 2 MET B 18 PHE B 19 0 SHEET 2 AA2 2 PHE B 32 GLU B 33 -1 O GLU B 33 N MET B 18 SHEET 1 AA3 2 ILE B 99 PHE B 101 0 SHEET 2 AA3 2 GLY B 218 PRO B 220 -1 O THR B 219 N ASP B 100 SHEET 1 AA4 2 MET B 106 LEU B 108 0 SHEET 2 AA4 2 LYS B 213 TYR B 215 -1 O LYS B 213 N LEU B 108 SHEET 1 AA5 4 GLU B 133 ALA B 136 0 SHEET 2 AA5 4 TYR B 184 GLU B 189 1 O LEU B 187 N GLY B 135 SHEET 3 AA5 4 VAL B 110 ARG B 115 -1 N SER B 111 O MET B 188 SHEET 4 AA5 4 LEU B 203 ILE B 206 -1 O THR B 204 N TYR B 114 SHEET 1 AA6 3 TYR A 51 LEU A 55 0 SHEET 2 AA6 3 LEU A 6 THR A 10 1 N VAL A 8 O GLU A 52 SHEET 3 AA6 3 LEU A 84 ALA A 85 1 O LEU A 84 N THR A 9 SHEET 1 AA7 2 MET A 18 PHE A 19 0 SHEET 2 AA7 2 PHE A 32 GLU A 33 -1 O GLU A 33 N MET A 18 SHEET 1 AA8 2 ILE A 99 PHE A 101 0 SHEET 2 AA8 2 GLY A 218 PRO A 220 -1 O THR A 219 N ASP A 100 SHEET 1 AA9 2 MET A 106 LEU A 108 0 SHEET 2 AA9 2 LYS A 213 TYR A 215 -1 O LYS A 213 N LEU A 108 SHEET 1 AB1 4 GLU A 133 GLY A 135 0 SHEET 2 AB1 4 TYR A 184 GLU A 189 1 O LEU A 187 N GLY A 135 SHEET 3 AB1 4 VAL A 110 ARG A 115 -1 N SER A 111 O MET A 188 SHEET 4 AB1 4 LEU A 203 ILE A 206 -1 O THR A 204 N TYR A 114 SSBOND 1 CYS B 201 CYS B 255 1555 1555 2.03 SSBOND 2 CYS A 201 CYS A 255 1555 1555 2.03 LINK OE1 GLU B 42 ZN ZN B 302 1555 4557 2.04 LINK NE2 HIS B 45 ZN ZN B 302 1555 1555 2.62 LINK ND1 HIS B 80 ZN ZN B 303 1555 1555 2.42 LINK ND1 HIS B 80 ZN ZN B 303 1555 4567 2.42 LINK NE2 HIS B 93 ZN ZN A 303 1555 1565 2.33 LINK NZ LYS B 97 ZN ZN A 303 1555 1565 2.27 LINK OD1 ASP B 240 ZN ZN B 301 1555 1555 1.96 LINK NZ LYS B 241 ZN ZN B 302 1555 4557 2.25 LINK ND1 HIS B 243 ZN ZN B 301 1555 1555 2.03 LINK ZN ZN B 301 ND1 HIS A 93 1555 1555 1.93 LINK ZN ZN B 301 OE1 GLU A 96 1555 1555 1.86 LINK ZN ZN B 303 O ACT B 305 1555 1555 2.59 LINK ZN ZN B 303 OXT ACT B 305 1555 1555 2.47 LINK ZN ZN B 303 O ACT B 305 1555 4567 2.59 LINK ZN ZN B 303 OXT ACT B 305 1555 4567 2.47 LINK NE2 HIS A 45 ZN ZN A 302 1555 1555 2.35 LINK ND1 HIS A 80 ZN ZN A 303 1555 1555 2.10 LINK OE1 GLU A 194 ZN ZN A 301 1555 4557 2.58 LINK OE2 GLU A 194 ZN ZN A 301 1555 4557 1.84 LINK NE2 HIS A 243 ZN ZN A 301 1555 1555 1.93 LINK NZ LYS A 246 ZN ZN A 301 1555 4557 2.18 LINK OE2 GLU A 247 ZN ZN A 301 1555 1555 1.81 LINK ZN ZN A 302 O HOH A 431 1555 1555 1.94 CISPEP 1 GLU B 14 PRO B 15 0 -3.39 CISPEP 2 GLU A 14 PRO A 15 0 -3.74 SITE 1 AC1 4 HIS A 93 GLU A 96 ASP B 240 HIS B 243 SITE 1 AC2 3 GLU B 42 HIS B 45 LYS B 241 SITE 1 AC3 2 HIS B 80 ACT B 305 SITE 1 AC4 9 TYR B 61 PRO B 88 THR B 90 ARG B 95 SITE 2 AC4 9 GLY B 140 ALA B 141 THR B 142 ASN B 172 SITE 3 AC4 9 GLU B 189 SITE 1 AC5 2 HIS B 80 ZN B 303 SITE 1 AC6 5 LYS B 60 TYR B 61 GLY B 62 VAL B 137 SITE 2 AC6 5 ASP B 139 SITE 1 AC7 9 GLY B 62 TRP B 70 THR B 92 VAL B 94 SITE 2 AC7 9 ARG B 95 ASP B 139 GLY B 140 ALA B 141 SITE 3 AC7 9 THR B 144 SITE 1 AC8 4 GLN B 237 ASP B 240 LEU B 242 HIS B 243 SITE 1 AC9 4 GLU A 194 HIS A 243 LYS A 246 GLU A 247 SITE 1 AD1 2 HIS A 45 HOH A 431 SITE 1 AD2 3 HIS A 80 HIS B 93 LYS B 97 SITE 1 AD3 9 TYR A 61 PRO A 88 THR A 90 ARG A 95 SITE 2 AD3 9 GLY A 140 ALA A 141 THR A 142 ASN A 172 SITE 3 AD3 9 GLU A 189 CRYST1 130.138 56.071 87.516 90.00 90.00 90.00 P 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007684 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017835 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011426 0.00000