HEADER HYDROLASE 15-MAR-17 5NFQ TITLE NOVEL EPOXIDE HYDROLASES BELONGING TO THE ALPHA/BETA HYDROLASES TITLE 2 SUPERFAMILY IN METAGENOMES FROM HOT ENVIRONMENTS COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPOXIDE HYDROLASE BELONGING TO ALPHA/BETA HYDROLASE COMPND 3 SUPERFAMILY METAGENOMIC FROM TOMSK SAMPLE; COMPND 4 CHAIN: A; COMPND 5 EC: 3.3.2.10; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METAGENOME; SOURCE 3 ORGANISM_TAXID: 256318; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS EPOXIDE HYDROLASES, METAGENOMICS, INDUSTRIAL BIOCATALYSIS, KEYWDS 2 STEREOSELECTIVITY, PROTEIN STRUCTURE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR E.E.FERRANDI,S.A.DE ROSE,C.SAYER,E.GUAZZELLI,C.MARCHESI,V.SANEEI, AUTHOR 2 M.N.ISUPOV,J.A.LITTLECHILD,D.MONTI REVDAT 3 08-MAY-24 5NFQ 1 REMARK REVDAT 2 14-NOV-18 5NFQ 1 JRNL REVDAT 1 16-MAY-18 5NFQ 0 JRNL AUTH E.E.FERRANDI,C.SAYER,S.A.DE ROSE,E.GUAZZELLI,C.MARCHESI, JRNL AUTH 2 V.SANEEI,M.N.ISUPOV,J.A.LITTLECHILD,D.MONTI JRNL TITL NEW THERMOPHILIC ALPHA / BETA CLASS EPOXIDE HYDROLASES FOUND JRNL TITL 2 IN METAGENOMES FROM HOT ENVIRONMENTS. JRNL REF FRONT BIOENG BIOTECHNOL V. 6 144 2018 JRNL REFN ISSN 2296-4185 JRNL PMID 30386778 JRNL DOI 10.3389/FBIOE.2018.00144 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.36 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 33829 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1824 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1957 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 77.31 REMARK 3 BIN R VALUE (WORKING SET) : 0.3070 REMARK 3 BIN FREE R VALUE SET COUNT : 108 REMARK 3 BIN FREE R VALUE : 0.2890 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2354 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 75 REMARK 3 SOLVENT ATOMS : 311 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.13 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.49000 REMARK 3 B22 (A**2) : 0.27000 REMARK 3 B33 (A**2) : -0.76000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.097 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.096 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.069 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.083 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.960 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2698 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3683 ; 1.419 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 349 ; 5.890 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 132 ;36.722 ;23.561 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 426 ;13.463 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;16.181 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 389 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2112 ; 0.007 ; 0.022 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1262 ; 2.610 ; 4.819 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1591 ; 3.693 ; 8.107 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1434 ; 3.857 ; 5.772 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 11695 ; 6.412 ;35.882 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5NFQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1200004042. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35698 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 39.360 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10600 REMARK 200 FOR THE DATA SET : 9.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 78.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 1.01500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MORDA REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: E8 12.5% W/V PEG 1000, 12.5% W/V PEG REMARK 280 3350, 12.5% V/V MPD 0.03 M OF EACH ETHYLENE GLYCOL 0.1 M MOPS/ REMARK 280 HEPES-NA PH 7.5, MICROBATCH, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.72500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 78.72500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 20.60000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 42.09000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 20.60000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.09000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 78.72500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 20.60000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 42.09000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 78.72500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 20.60000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 42.09000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 768 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 299 REMARK 465 HIS A 300 REMARK 465 HIS A 301 REMARK 465 HIS A 302 REMARK 465 HIS A 303 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 2 123.36 163.06 REMARK 500 PRO A 36 62.67 -109.65 REMARK 500 GLU A 37 -130.50 -108.11 REMARK 500 SER A 38 -178.04 -177.23 REMARK 500 ARG A 64 -122.88 49.61 REMARK 500 ASP A 102 -132.15 58.27 REMARK 500 HIS A 117 -20.39 73.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 58 ASP A 59 149.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 412 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 413 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IMD A 414 DBREF 5NFQ A 1 303 PDB 5NFQ 5NFQ 1 303 SEQRES 1 A 303 MET THR PHE GLU LEU LYS ARG VAL ALA LEU PRO ASN GLY SEQRES 2 A 303 ILE HIS LEU ASP VAL VAL ASP GLU GLY PRO THR ASP ALA SEQRES 3 A 303 PRO VAL LEU ILE PHE LEU HIS GLY PHE PRO GLU SER HIS SEQRES 4 A 303 ARG THR TRP ARG HIS GLN ILE ARG HIS PHE SER ASP ARG SEQRES 5 A 303 PHE ARG CYS ILE ALA PRO ASP GLN ARG GLY TYR ARG GLY SEQRES 6 A 303 SER SER LYS PRO GLN GLU VAL ALA ALA TYR THR PRO ASP SEQRES 7 A 303 LYS LEU ILE GLY ASP ILE PHE LEU LEU ALA ASP THR LEU SEQRES 8 A 303 GLY ILE GLY SER PHE THR ILE VAL GLY HIS ASP TRP GLY SEQRES 9 A 303 GLY ALA ILE ALA TRP GLY VAL ALA LEU GLY GLY GLN HIS SEQRES 10 A 303 LEU ARG VAL GLU ARG ALA ILE ILE ALA ASN ALA PRO HIS SEQRES 11 A 303 PRO ALA ILE PHE GLN LYS LEU LEU TYR THR HIS PRO VAL SEQRES 12 A 303 GLN ARG GLU ALA SER GLN TYR ILE ARG GLY PHE ARG ASP SEQRES 13 A 303 PRO ALA ASN ASP ALA LEU VAL LYS GLU HIS GLY LEU THR SEQRES 14 A 303 GLY LEU LEU MET LYS GLU VAL LYS TRP ASP ARG PRO SER SEQRES 15 A 303 ALA MET GLU PRO GLU GLU ARG ASP GLN LEU LEU ARG ASP SEQRES 16 A 303 TRP GLN ASN HIS ASP ALA ALA PHE GLY MET LEU ASN TYR SEQRES 17 A 303 TYR ARG ALA SER PRO ILE ASP VAL PRO THR MET ASP ALA SEQRES 18 A 303 PRO PHE LYS VAL PRO ALA GLY TYR THR PRO PRO GLN LEU SEQRES 19 A 303 PRO ARG LEU THR ILE PRO THR LEU VAL ILE TRP ALA LEU SEQRES 20 A 303 ASP ASP LEU ALA LEU PRO PRO GLU ASN LEU GLU GLY LEU SEQRES 21 A 303 GLU GLU ILE ILE ASP PRO LEU THR ILE VAL ARG VAL PRO SEQRES 22 A 303 ASP CYS GLY HIS PHE VAL PRO TRP GLU ALA PRO ASP ALA SEQRES 23 A 303 VAL ASN ALA ALA MET GLU GLY PHE LEU ALA GLY HIS HIS SEQRES 24 A 303 HIS HIS HIS HIS HET PEG A 401 7 HET PEG A 402 7 HET EDO A 403 4 HET EDO A 404 4 HET EDO A 405 4 HET EDO A 406 4 HET EDO A 407 4 HET EDO A 408 4 HET EDO A 409 4 HET EDO A 410 4 HET EDO A 411 4 HET PGE A 412 10 HET PGE A 413 10 HET IMD A 414 5 HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM EDO 1,2-ETHANEDIOL HETNAM PGE TRIETHYLENE GLYCOL HETNAM IMD IMIDAZOLE HETSYN EDO ETHYLENE GLYCOL FORMUL 2 PEG 2(C4 H10 O3) FORMUL 4 EDO 9(C2 H6 O2) FORMUL 13 PGE 2(C6 H14 O4) FORMUL 15 IMD C3 H5 N2 1+ FORMUL 16 HOH *311(H2 O) HELIX 1 AA1 SER A 38 THR A 41 5 4 HELIX 2 AA2 TRP A 42 SER A 50 1 9 HELIX 3 AA3 GLU A 71 TYR A 75 5 5 HELIX 4 AA4 THR A 76 LEU A 91 1 16 HELIX 5 AA5 ASP A 102 GLN A 116 1 15 HELIX 6 AA6 ILE A 133 HIS A 141 1 9 HELIX 7 AA7 HIS A 141 SER A 148 1 8 HELIX 8 AA8 SER A 148 ARG A 155 1 8 HELIX 9 AA9 ASP A 156 ALA A 158 5 3 HELIX 10 AB1 ASN A 159 GLU A 175 1 17 HELIX 11 AB2 GLU A 185 TRP A 196 1 12 HELIX 12 AB3 ASN A 198 SER A 212 1 15 HELIX 13 AB4 PRO A 253 GLU A 258 5 6 HELIX 14 AB5 GLY A 259 ILE A 264 1 6 HELIX 15 AB6 PHE A 278 ALA A 283 1 6 HELIX 16 AB7 ALA A 283 ALA A 296 1 14 SHEET 1 AA1 8 LEU A 5 ALA A 9 0 SHEET 2 AA1 8 HIS A 15 GLU A 21 -1 O LEU A 16 N VAL A 8 SHEET 3 AA1 8 ARG A 54 ASP A 59 -1 O CYS A 55 N GLU A 21 SHEET 4 AA1 8 VAL A 28 LEU A 32 1 N PHE A 31 O ILE A 56 SHEET 5 AA1 8 PHE A 96 HIS A 101 1 O VAL A 99 N LEU A 32 SHEET 6 AA1 8 VAL A 120 ALA A 126 1 O ALA A 126 N GLY A 100 SHEET 7 AA1 8 THR A 241 ALA A 246 1 O ILE A 244 N ILE A 125 SHEET 8 AA1 8 LEU A 267 VAL A 272 1 O VAL A 270 N VAL A 243 CISPEP 1 PHE A 35 PRO A 36 0 -0.73 CISPEP 2 ASP A 265 PRO A 266 0 5.76 SITE 1 AC1 4 ARG A 236 GLU A 261 GLU A 262 ASP A 265 SITE 1 AC2 5 ASP A 89 GLY A 92 ASP A 190 EDO A 408 SITE 2 AC2 5 HOH A 506 SITE 1 AC3 5 LEU A 5 ARG A 7 ASP A 17 ARG A 236 SITE 2 AC3 5 GLU A 262 SITE 1 AC4 4 ALA A 283 PRO A 284 ASP A 285 ALA A 286 SITE 1 AC5 7 ASN A 12 ARG A 61 LYS A 79 PGE A 413 SITE 2 AC5 7 HOH A 542 HOH A 593 HOH A 720 SITE 1 AC6 7 ARG A 43 HIS A 44 MET A 184 GLU A 185 SITE 2 AC6 7 GLU A 188 HOH A 575 HOH A 618 SITE 1 AC7 3 ARG A 271 HOH A 512 HOH A 518 SITE 1 AC8 3 HIS A 141 PEG A 402 HOH A 615 SITE 1 AC9 3 HIS A 48 HOH A 606 HOH A 714 SITE 1 AD1 5 LYS A 68 HOH A 532 HOH A 550 HOH A 563 SITE 2 AD1 5 HOH A 602 SITE 1 AD2 6 PRO A 77 TRP A 103 SER A 212 PRO A 213 SITE 2 AD2 6 ILE A 214 HOH A 510 SITE 1 AD3 9 GLY A 82 LEU A 162 HIS A 166 GLY A 170 SITE 2 AD3 9 MET A 173 EDO A 405 HOH A 593 HOH A 636 SITE 3 AD3 9 HOH A 697 SITE 1 AD4 4 GLY A 293 PHE A 294 ALA A 296 HIS A 298 CRYST1 41.200 84.180 157.450 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024272 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011879 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006351 0.00000