data_5NIR # _entry.id 5NIR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.283 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5NIR WWPDB D_1200004184 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5NIR _pdbx_database_status.recvd_initial_deposition_date 2017-03-27 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Fischer, G.' 1 0000-0001-9861-1528 'Blythe, E.' 2 ? 'Hyvonen, M.' 3 0000-0001-8683-4070 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Biol. Chem.' _citation.journal_id_ASTM JBCHA3 _citation.journal_id_CSD 0071 _citation.journal_id_ISSN 1083-351X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 292 _citation.language ? _citation.page_first 12516 _citation.page_last 12527 _citation.title ;Structural analyses of von Willebrand factor C domains of collagen 2A and CCN3 reveal an alternative mode of binding to bone morphogenetic protein-2. ; _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1074/jbc.M117.788992 _citation.pdbx_database_id_PubMed 28584056 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Xu, E.R.' 1 primary 'Blythe, E.E.' 2 primary 'Fischer, G.' 3 primary 'Hyvonen, M.' 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5NIR _cell.details ? _cell.formula_units_Z ? _cell.length_a 31.930 _cell.length_a_esd ? _cell.length_b 60.160 _cell.length_b_esd ? _cell.length_c 86.420 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5NIR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Collagen alpha-1(II) chain' 7921.925 2 ? ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 8 ? ? ? ? 3 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 7 ? ? ? ? 4 non-polymer syn 'TETRAETHYLENE GLYCOL' 194.226 6 ? ? ? ? 5 non-polymer syn 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL 326.383 1 ? ? ? ? 6 water nat water 18.015 16 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Alpha-1 type II collagen' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GSMAQEAGSCVQDGQRYNDKDVWKPEPCRICVCDTGTVLCDDIICEDVKDCLSPEIPFGECCPICPTDLATASG _entity_poly.pdbx_seq_one_letter_code_can GSMAQEAGSCVQDGQRYNDKDVWKPEPCRICVCDTGTVLCDDIICEDVKDCLSPEIPFGECCPICPTDLATASG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 MET n 1 4 ALA n 1 5 GLN n 1 6 GLU n 1 7 ALA n 1 8 GLY n 1 9 SER n 1 10 CYS n 1 11 VAL n 1 12 GLN n 1 13 ASP n 1 14 GLY n 1 15 GLN n 1 16 ARG n 1 17 TYR n 1 18 ASN n 1 19 ASP n 1 20 LYS n 1 21 ASP n 1 22 VAL n 1 23 TRP n 1 24 LYS n 1 25 PRO n 1 26 GLU n 1 27 PRO n 1 28 CYS n 1 29 ARG n 1 30 ILE n 1 31 CYS n 1 32 VAL n 1 33 CYS n 1 34 ASP n 1 35 THR n 1 36 GLY n 1 37 THR n 1 38 VAL n 1 39 LEU n 1 40 CYS n 1 41 ASP n 1 42 ASP n 1 43 ILE n 1 44 ILE n 1 45 CYS n 1 46 GLU n 1 47 ASP n 1 48 VAL n 1 49 LYS n 1 50 ASP n 1 51 CYS n 1 52 LEU n 1 53 SER n 1 54 PRO n 1 55 GLU n 1 56 ILE n 1 57 PRO n 1 58 PHE n 1 59 GLY n 1 60 GLU n 1 61 CYS n 1 62 CYS n 1 63 PRO n 1 64 ILE n 1 65 CYS n 1 66 PRO n 1 67 THR n 1 68 ASP n 1 69 LEU n 1 70 ALA n 1 71 THR n 1 72 ALA n 1 73 SER n 1 74 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 74 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene COL2A1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pHAT3 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CO2A1_HUMAN _struct_ref.pdbx_db_accession P02458 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code QEAGSCVQDGQRYNDKDVWKPEPCRICVCDTGTVLCDDIICEDVKDCLSPEIPFGECCPICPTDLATASG _struct_ref.pdbx_align_begin 29 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5NIR A 5 ? 74 ? P02458 29 ? 98 ? 29 98 2 1 5NIR B 5 ? 74 ? P02458 29 ? 98 ? 29 98 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5NIR GLY A 1 ? UNP P02458 ? ? 'expression tag' 25 1 1 5NIR SER A 2 ? UNP P02458 ? ? 'expression tag' 26 2 1 5NIR MET A 3 ? UNP P02458 ? ? 'expression tag' 27 3 1 5NIR ALA A 4 ? UNP P02458 ? ? 'expression tag' 28 4 2 5NIR GLY B 1 ? UNP P02458 ? ? 'expression tag' 25 5 2 5NIR SER B 2 ? UNP P02458 ? ? 'expression tag' 26 6 2 5NIR MET B 3 ? UNP P02458 ? ? 'expression tag' 27 7 2 5NIR ALA B 4 ? UNP P02458 ? ? 'expression tag' 28 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 P33 non-polymer . 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL 'HEPTAETHYLENE GLYCOL, PEG330' 'C14 H30 O8' 326.383 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PG4 non-polymer . 'TETRAETHYLENE GLYCOL' ? 'C8 H18 O5' 194.226 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5NIR _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.83 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 56.49 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M HEPES, pH 7.5, 40% PEG 200' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-01-30 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.96861 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I24' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.96861 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I24 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate 30.54 _reflns.entry_id 5NIR _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.74 _reflns.d_resolution_low 49.37 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 17667 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.4 _reflns.pdbx_Rmerge_I_obs 0.042 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.042 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 22.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.744 _reflns_shell.d_res_low 1.750 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.2 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100.0 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.709 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 5.9 _reflns_shell.pdbx_Rsym_value 0.709 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -5.54350 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][2] 2.61560 _refine.aniso_B[2][3] 0.00000 _refine.aniso_B[3][3] 2.92780 _refine.B_iso_max ? _refine.B_iso_mean 39.26 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.947 _refine.correlation_coeff_Fo_to_Fc_free 0.937 _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5NIR _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.74 _refine.ls_d_res_low 49.37 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 17616 _refine.ls_number_reflns_R_free 894 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.2 _refine.ls_percent_reflns_R_free 5.070 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.210 _refine.ls_R_factor_R_free 0.231 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.209 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.106 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.107 _refine.pdbx_overall_SU_R_Blow_DPI 0.115 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI 0.113 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_analyze.entry_id 5NIR _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_coordinate_error_obs 0.26 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_sigma_a_free_details ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_sigma_a_obs_details ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.RG_d_res_high ? _refine_analyze.RG_d_res_low ? _refine_analyze.RG_free ? _refine_analyze.RG_work ? _refine_analyze.RG_free_work_ratio ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 993 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 181 _refine_hist.number_atoms_solvent 16 _refine_hist.number_atoms_total 1190 _refine_hist.d_res_high 1.74 _refine_hist.d_res_low 49.37 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.010 ? 1223 ? t_bond_d 2.00 HARMONIC 'X-RAY DIFFRACTION' ? 1.22 ? 1591 ? t_angle_deg 2.00 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 478 ? t_dihedral_angle_d 2.00 SINUSOIDAL 'X-RAY DIFFRACTION' ? ? ? ? ? t_incorr_chiral_ct ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_pseud_angle ? ? 'X-RAY DIFFRACTION' ? ? ? 33 ? t_trig_c_planes 2.00 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 147 ? t_gen_planes 5.00 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 1223 ? t_it 20.00 HARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_nbd ? ? 'X-RAY DIFFRACTION' ? 3.94 ? ? ? t_omega_torsion ? ? 'X-RAY DIFFRACTION' ? 14.98 ? ? ? t_other_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_improper_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? 147 ? t_chiral_improper_torsion 5.00 SEMIHARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_sum_occupancies ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_distance ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_angle ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? 1435 ? t_ideal_dist_contact 4.00 SEMIHARMONIC # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.74 _refine_ls_shell.d_res_low 1.84 _refine_ls_shell.number_reflns_all 2680 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 140 _refine_ls_shell.number_reflns_R_work 2540 _refine_ls_shell.percent_reflns_obs 95.15 _refine_ls_shell.percent_reflns_R_free 5.22 _refine_ls_shell.R_factor_all 0.224 _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.257 _refine_ls_shell.R_factor_R_free_error 0.000 _refine_ls_shell.R_factor_R_work 0.222 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 9 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5NIR _struct.title 'Crystal structure of collagen 2A vWC domain' _struct.pdbx_descriptor 'Collagen alpha-1(II) chain' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5NIR _struct_keywords.text 'collagen, vwc, ECM, BMP-2, Structural protein' _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 3 ? K N N 3 ? L N N 4 ? M N N 4 ? N N N 4 ? O N N 5 ? P N N 2 ? Q N N 3 ? R N N 3 ? S N N 3 ? T N N 3 ? U N N 3 ? V N N 4 ? W N N 4 ? X N N 4 ? Y N N 6 ? Z N N 6 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 10 SG ? ? ? 1_555 A CYS 33 SG ? ? A CYS 34 A CYS 57 1_555 ? ? ? ? ? ? ? 2.013 ? disulf2 disulf ? ? A CYS 28 SG ? ? ? 1_555 A CYS 61 SG ? ? A CYS 52 A CYS 85 1_555 ? ? ? ? ? ? ? 2.042 ? disulf3 disulf ? ? A CYS 31 SG ? ? ? 1_555 A CYS 40 SG ? ? A CYS 55 A CYS 64 1_555 ? ? ? ? ? ? ? 2.032 ? disulf4 disulf ? ? A CYS 45 SG ? ? ? 1_555 A CYS 62 SG ? ? A CYS 69 A CYS 86 1_555 ? ? ? ? ? ? ? 2.033 ? disulf5 disulf ? ? A CYS 51 SG ? ? ? 1_555 A CYS 65 SG ? ? A CYS 75 A CYS 89 1_555 ? ? ? ? ? ? ? 2.040 ? disulf6 disulf ? ? B CYS 10 SG ? ? ? 1_555 B CYS 33 SG ? ? B CYS 34 B CYS 57 1_555 ? ? ? ? ? ? ? 2.011 ? disulf7 disulf ? ? B CYS 28 SG ? ? ? 1_555 B CYS 61 SG ? ? B CYS 52 B CYS 85 1_555 ? ? ? ? ? ? ? 2.034 ? disulf8 disulf ? ? B CYS 31 SG ? ? ? 1_555 B CYS 40 SG ? ? B CYS 55 B CYS 64 1_555 ? ? ? ? ? ? ? 2.043 ? disulf9 disulf ? ? B CYS 45 SG ? ? ? 1_555 B CYS 62 SG ? ? B CYS 69 B CYS 86 1_555 ? ? ? ? ? ? ? 2.019 ? disulf10 disulf ? ? B CYS 51 SG ? ? ? 1_555 B CYS 65 SG ? ? B CYS 75 B CYS 89 1_555 ? ? ? ? ? ? ? 2.060 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 6 ? AA3 ? 2 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? parallel AA4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 CYS A 10 ? GLN A 12 ? CYS A 34 GLN A 36 AA1 2 GLN A 15 ? TYR A 17 ? GLN A 39 TYR A 41 AA2 1 VAL A 22 ? GLU A 26 ? VAL A 46 GLU A 50 AA2 2 ARG A 29 ? ASP A 34 ? ARG A 53 ASP A 58 AA2 3 THR A 37 ? GLU A 46 ? THR A 61 GLU A 70 AA2 4 THR B 37 ? CYS B 45 ? THR B 61 CYS B 69 AA2 5 ARG B 29 ? ASP B 34 ? ARG B 53 ASP B 58 AA2 6 VAL B 22 ? GLU B 26 ? VAL B 46 GLU B 50 AA3 1 ILE A 64 ? CYS A 65 ? ILE A 88 CYS A 89 AA3 2 ASP B 47 ? VAL B 48 ? ASP B 71 VAL B 72 AA4 1 CYS B 10 ? GLN B 12 ? CYS B 34 GLN B 36 AA4 2 GLN B 15 ? TYR B 17 ? GLN B 39 TYR B 41 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N CYS A 10 ? N CYS A 34 O TYR A 17 ? O TYR A 41 AA2 1 2 N TRP A 23 ? N TRP A 47 O CYS A 31 ? O CYS A 55 AA2 2 3 N ASP A 34 ? N ASP A 58 O THR A 37 ? O THR A 61 AA2 3 4 N GLU A 46 ? N GLU A 70 O ILE B 44 ? O ILE B 68 AA2 4 5 O THR B 37 ? O THR B 61 N ASP B 34 ? N ASP B 58 AA2 5 6 O CYS B 31 ? O CYS B 55 N TRP B 23 ? N TRP B 47 AA3 1 2 N CYS A 65 ? N CYS A 89 O ASP B 47 ? O ASP B 71 AA4 1 2 N CYS B 10 ? N CYS B 34 O TYR B 17 ? O TYR B 41 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EDO 101 ? 6 'binding site for residue EDO A 101' AC2 Software A EDO 102 ? 5 'binding site for residue EDO A 102' AC3 Software A EDO 103 ? 3 'binding site for residue EDO A 103' AC4 Software A EDO 104 ? 3 'binding site for residue EDO A 104' AC5 Software A EDO 105 ? 3 'binding site for residue EDO A 105' AC6 Software A EDO 106 ? 8 'binding site for residue EDO A 106' AC7 Software A EDO 107 ? 2 'binding site for residue EDO A 107' AC8 Software A PEG 108 ? 4 'binding site for residue PEG A 108' AC9 Software A PEG 109 ? 2 'binding site for residue PEG A 109' AD1 Software A PG4 110 ? 12 'binding site for residue PG4 A 110' AD2 Software A PG4 111 ? 17 'binding site for residue PG4 A 111' AD3 Software A PG4 112 ? 9 'binding site for residue PG4 A 112' AD4 Software B P33 101 ? 15 'binding site for residue P33 B 101' AD5 Software B EDO 102 ? 3 'binding site for residue EDO B 102' AD6 Software B PEG 103 ? 3 'binding site for residue PEG B 103' AD7 Software B PEG 104 ? 4 'binding site for residue PEG B 104' AD8 Software B PEG 105 ? 6 'binding site for residue PEG B 105' AD9 Software B PEG 106 ? 6 'binding site for residue PEG B 106' AE1 Software B PEG 107 ? 8 'binding site for residue PEG B 107' AE2 Software B PG4 108 ? 14 'binding site for residue PG4 B 108' AE3 Software B PG4 109 ? 5 'binding site for residue PG4 B 109' AE4 Software B PG4 110 ? 5 'binding site for residue PG4 B 110' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 CYS A 65 ? CYS A 89 . ? 1_555 ? 2 AC1 6 THR A 67 ? THR A 91 . ? 1_555 ? 3 AC1 6 EDO I . ? EDO A 107 . ? 1_555 ? 4 AC1 6 ASP B 47 ? ASP B 71 . ? 1_555 ? 5 AC1 6 VAL B 48 ? VAL B 72 . ? 1_555 ? 6 AC1 6 LYS B 49 ? LYS B 73 . ? 1_555 ? 7 AC2 5 ASP A 13 ? ASP A 37 . ? 1_555 ? 8 AC2 5 TYR A 17 ? TYR A 41 . ? 1_555 ? 9 AC2 5 TRP A 23 ? TRP A 47 . ? 1_555 ? 10 AC2 5 PRO A 25 ? PRO A 49 . ? 1_555 ? 11 AC2 5 GLN B 15 ? GLN B 39 . ? 3_545 ? 12 AC3 3 GLU A 26 ? GLU A 50 . ? 1_555 ? 13 AC3 3 ARG A 29 ? ARG A 53 . ? 1_555 ? 14 AC3 3 EDO F . ? EDO A 104 . ? 1_555 ? 15 AC4 3 ARG A 29 ? ARG A 53 . ? 1_555 ? 16 AC4 3 EDO E . ? EDO A 103 . ? 1_555 ? 17 AC4 3 LEU B 69 ? LEU B 93 . ? 4_556 ? 18 AC5 3 ARG A 16 ? ARG A 40 . ? 1_555 ? 19 AC5 3 ASN A 18 ? ASN A 42 . ? 1_555 ? 20 AC5 3 ILE B 30 ? ILE B 54 . ? 3_545 ? 21 AC6 8 CYS A 45 ? CYS A 69 . ? 1_555 ? 22 AC6 8 ASP A 47 ? ASP A 71 . ? 1_555 ? 23 AC6 8 CYS A 61 ? CYS A 85 . ? 1_555 ? 24 AC6 8 PRO A 63 ? PRO A 87 . ? 1_555 ? 25 AC6 8 GLY A 74 ? GLY A 98 . ? 4_556 ? 26 AC6 8 LYS B 49 ? LYS B 73 . ? 4_556 ? 27 AC6 8 PRO B 54 ? PRO B 78 . ? 4_556 ? 28 AC6 8 P33 O . ? P33 B 101 . ? 4_556 ? 29 AC7 2 THR A 67 ? THR A 91 . ? 1_555 ? 30 AC7 2 EDO C . ? EDO A 101 . ? 1_555 ? 31 AC8 4 PRO A 25 ? PRO A 49 . ? 1_555 ? 32 AC8 4 GLU A 26 ? GLU A 50 . ? 1_555 ? 33 AC8 4 PG4 M . ? PG4 A 111 . ? 1_555 ? 34 AC8 4 GLY B 14 ? GLY B 38 . ? 3_545 ? 35 AC9 2 LEU A 69 ? LEU A 93 . ? 1_555 ? 36 AC9 2 ALA A 70 ? ALA A 94 . ? 1_555 ? 37 AD1 12 LYS A 24 ? LYS A 48 . ? 1_555 ? 38 AD1 12 PRO A 27 ? PRO A 51 . ? 1_555 ? 39 AD1 12 ASP A 50 ? ASP A 74 . ? 4_456 ? 40 AD1 12 CYS A 51 ? CYS A 75 . ? 4_456 ? 41 AD1 12 LEU A 52 ? LEU A 76 . ? 4_456 ? 42 AD1 12 GLU A 60 ? GLU A 84 . ? 1_555 ? 43 AD1 12 CYS A 61 ? CYS A 85 . ? 1_555 ? 44 AD1 12 CYS A 62 ? CYS A 86 . ? 1_555 ? 45 AD1 12 ILE B 43 ? ILE B 67 . ? 1_555 ? 46 AD1 12 ILE B 44 ? ILE B 68 . ? 1_555 ? 47 AD1 12 P33 O . ? P33 B 101 . ? 1_555 ? 48 AD1 12 PEG T . ? PEG B 106 . ? 1_555 ? 49 AD2 17 LYS A 24 ? LYS A 48 . ? 1_555 ? 50 AD2 17 PRO A 25 ? PRO A 49 . ? 1_555 ? 51 AD2 17 GLU A 26 ? GLU A 50 . ? 1_555 ? 52 AD2 17 PRO A 27 ? PRO A 51 . ? 1_555 ? 53 AD2 17 ILE A 56 ? ILE A 80 . ? 1_555 ? 54 AD2 17 PRO A 57 ? PRO A 81 . ? 1_555 ? 55 AD2 17 PHE A 58 ? PHE A 82 . ? 1_555 ? 56 AD2 17 GLY A 59 ? GLY A 83 . ? 1_555 ? 57 AD2 17 GLU A 60 ? GLU A 84 . ? 1_555 ? 58 AD2 17 PEG J . ? PEG A 108 . ? 1_555 ? 59 AD2 17 HOH Y . ? HOH A 203 . ? 1_555 ? 60 AD2 17 GLY B 14 ? GLY B 38 . ? 3_545 ? 61 AD2 17 ARG B 16 ? ARG B 40 . ? 3_545 ? 62 AD2 17 SER B 53 ? SER B 77 . ? 4_556 ? 63 AD2 17 PRO B 54 ? PRO B 78 . ? 4_556 ? 64 AD2 17 GLU B 55 ? GLU B 79 . ? 4_556 ? 65 AD2 17 PG4 W . ? PG4 B 109 . ? 3_545 ? 66 AD3 9 VAL A 38 ? VAL A 62 . ? 1_555 ? 67 AD3 9 LEU A 39 ? LEU A 63 . ? 1_555 ? 68 AD3 9 CYS A 40 ? CYS A 64 . ? 1_555 ? 69 AD3 9 ASP A 41 ? ASP A 65 . ? 1_555 ? 70 AD3 9 ASP A 42 ? ASP A 66 . ? 1_555 ? 71 AD3 9 HOH Y . ? HOH A 201 . ? 1_555 ? 72 AD3 9 VAL B 38 ? VAL B 62 . ? 1_555 ? 73 AD3 9 CYS B 40 ? CYS B 64 . ? 1_555 ? 74 AD3 9 EDO P . ? EDO B 102 . ? 1_555 ? 75 AD4 15 ASP A 50 ? ASP A 74 . ? 4_456 ? 76 AD4 15 CYS A 51 ? CYS A 75 . ? 4_456 ? 77 AD4 15 PRO A 54 ? PRO A 78 . ? 4_456 ? 78 AD4 15 GLU A 60 ? GLU A 84 . ? 1_555 ? 79 AD4 15 CYS A 62 ? CYS A 86 . ? 1_555 ? 80 AD4 15 ILE A 64 ? ILE A 88 . ? 1_555 ? 81 AD4 15 EDO H . ? EDO A 106 . ? 4_456 ? 82 AD4 15 PG4 L . ? PG4 A 110 . ? 1_555 ? 83 AD4 15 ILE B 43 ? ILE B 67 . ? 1_555 ? 84 AD4 15 ILE B 44 ? ILE B 68 . ? 1_555 ? 85 AD4 15 CYS B 45 ? CYS B 69 . ? 1_555 ? 86 AD4 15 GLU B 46 ? GLU B 70 . ? 1_555 ? 87 AD4 15 ASP B 47 ? ASP B 71 . ? 1_555 ? 88 AD4 15 VAL B 48 ? VAL B 72 . ? 1_555 ? 89 AD4 15 PEG R . ? PEG B 104 . ? 1_555 ? 90 AD5 3 PG4 N . ? PG4 A 112 . ? 1_555 ? 91 AD5 3 GLN B 12 ? GLN B 36 . ? 1_555 ? 92 AD5 3 ARG B 29 ? ARG B 53 . ? 1_555 ? 93 AD6 3 LEU A 39 ? LEU A 63 . ? 1_555 ? 94 AD6 3 ARG B 29 ? ARG B 53 . ? 1_555 ? 95 AD6 3 PEG T . ? PEG B 106 . ? 1_555 ? 96 AD7 4 VAL B 48 ? VAL B 72 . ? 1_555 ? 97 AD7 4 ASP B 50 ? ASP B 74 . ? 1_555 ? 98 AD7 4 CYS B 51 ? CYS B 75 . ? 1_555 ? 99 AD7 4 P33 O . ? P33 B 101 . ? 1_555 ? 100 AD8 6 GLU A 46 ? GLU A 70 . ? 1_555 ? 101 AD8 6 LYS B 24 ? LYS B 48 . ? 1_555 ? 102 AD8 6 ILE B 43 ? ILE B 67 . ? 1_555 ? 103 AD8 6 GLU B 60 ? GLU B 84 . ? 1_555 ? 104 AD8 6 CYS B 61 ? CYS B 85 . ? 1_555 ? 105 AD8 6 CYS B 62 ? CYS B 86 . ? 1_555 ? 106 AD9 6 LEU A 52 ? LEU A 76 . ? 4_456 ? 107 AD9 6 PG4 L . ? PG4 A 110 . ? 1_555 ? 108 AD9 6 ARG B 29 ? ARG B 53 . ? 1_555 ? 109 AD9 6 ASP B 42 ? ASP B 66 . ? 1_555 ? 110 AD9 6 PEG Q . ? PEG B 103 . ? 1_555 ? 111 AD9 6 PEG U . ? PEG B 107 . ? 1_555 ? 112 AE1 8 GLN A 15 ? GLN A 39 . ? 3_555 ? 113 AE1 8 ASP B 13 ? ASP B 37 . ? 1_555 ? 114 AE1 8 GLN B 15 ? GLN B 39 . ? 1_555 ? 115 AE1 8 PRO B 25 ? PRO B 49 . ? 1_555 ? 116 AE1 8 GLU B 26 ? GLU B 50 . ? 1_555 ? 117 AE1 8 ARG B 29 ? ARG B 53 . ? 1_555 ? 118 AE1 8 PEG T . ? PEG B 106 . ? 1_555 ? 119 AE1 8 HOH Z . ? HOH B 202 . ? 1_555 ? 120 AE2 14 GLY A 14 ? GLY A 38 . ? 3_555 ? 121 AE2 14 GLN A 15 ? GLN A 39 . ? 3_555 ? 122 AE2 14 ARG A 16 ? ARG A 40 . ? 3_555 ? 123 AE2 14 PRO A 54 ? PRO A 78 . ? 4_456 ? 124 AE2 14 GLU A 55 ? GLU A 79 . ? 4_456 ? 125 AE2 14 LYS B 24 ? LYS B 48 . ? 1_555 ? 126 AE2 14 GLU B 26 ? GLU B 50 . ? 1_555 ? 127 AE2 14 PRO B 27 ? PRO B 51 . ? 1_555 ? 128 AE2 14 ILE B 56 ? ILE B 80 . ? 1_555 ? 129 AE2 14 PRO B 57 ? PRO B 81 . ? 1_555 ? 130 AE2 14 PHE B 58 ? PHE B 82 . ? 1_555 ? 131 AE2 14 GLY B 59 ? GLY B 83 . ? 1_555 ? 132 AE2 14 GLU B 60 ? GLU B 84 . ? 1_555 ? 133 AE2 14 HOH Z . ? HOH B 207 . ? 1_555 ? 134 AE3 5 ASP A 34 ? ASP A 58 . ? 1_555 ? 135 AE3 5 PG4 M . ? PG4 A 111 . ? 3_555 ? 136 AE3 5 VAL B 11 ? VAL B 35 . ? 1_555 ? 137 AE3 5 ASP B 13 ? ASP B 37 . ? 1_555 ? 138 AE3 5 GLY B 14 ? GLY B 38 . ? 1_555 ? 139 AE4 5 CYS B 10 ? CYS B 34 . ? 1_555 ? 140 AE4 5 VAL B 11 ? VAL B 35 . ? 1_555 ? 141 AE4 5 GLY B 36 ? GLY B 60 . ? 1_555 ? 142 AE4 5 THR B 37 ? THR B 61 . ? 1_555 ? 143 AE4 5 VAL B 38 ? VAL B 62 . ? 1_555 ? # _atom_sites.entry_id 5NIR _atom_sites.fract_transf_matrix[1][1] 0.031319 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016622 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011571 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 25 ? ? ? A . n A 1 2 SER 2 26 ? ? ? A . n A 1 3 MET 3 27 ? ? ? A . n A 1 4 ALA 4 28 ? ? ? A . n A 1 5 GLN 5 29 ? ? ? A . n A 1 6 GLU 6 30 30 GLU GLU A . n A 1 7 ALA 7 31 31 ALA ALA A . n A 1 8 GLY 8 32 32 GLY GLY A . n A 1 9 SER 9 33 33 SER SER A . n A 1 10 CYS 10 34 34 CYS CYS A . n A 1 11 VAL 11 35 35 VAL VAL A . n A 1 12 GLN 12 36 36 GLN GLN A . n A 1 13 ASP 13 37 37 ASP ASP A . n A 1 14 GLY 14 38 38 GLY GLY A . n A 1 15 GLN 15 39 39 GLN GLN A . n A 1 16 ARG 16 40 40 ARG ARG A . n A 1 17 TYR 17 41 41 TYR TYR A . n A 1 18 ASN 18 42 42 ASN ASN A . n A 1 19 ASP 19 43 43 ASP ASP A . n A 1 20 LYS 20 44 44 LYS LYS A . n A 1 21 ASP 21 45 45 ASP ASP A . n A 1 22 VAL 22 46 46 VAL VAL A . n A 1 23 TRP 23 47 47 TRP TRP A . n A 1 24 LYS 24 48 48 LYS LYS A . n A 1 25 PRO 25 49 49 PRO PRO A . n A 1 26 GLU 26 50 50 GLU GLU A . n A 1 27 PRO 27 51 51 PRO PRO A . n A 1 28 CYS 28 52 52 CYS CYS A . n A 1 29 ARG 29 53 53 ARG ARG A . n A 1 30 ILE 30 54 54 ILE ILE A . n A 1 31 CYS 31 55 55 CYS CYS A . n A 1 32 VAL 32 56 56 VAL VAL A . n A 1 33 CYS 33 57 57 CYS CYS A . n A 1 34 ASP 34 58 58 ASP ASP A . n A 1 35 THR 35 59 59 THR THR A . n A 1 36 GLY 36 60 60 GLY GLY A . n A 1 37 THR 37 61 61 THR THR A . n A 1 38 VAL 38 62 62 VAL VAL A . n A 1 39 LEU 39 63 63 LEU LEU A . n A 1 40 CYS 40 64 64 CYS CYS A . n A 1 41 ASP 41 65 65 ASP ASP A . n A 1 42 ASP 42 66 66 ASP ASP A . n A 1 43 ILE 43 67 67 ILE ILE A . n A 1 44 ILE 44 68 68 ILE ILE A . n A 1 45 CYS 45 69 69 CYS CYS A . n A 1 46 GLU 46 70 70 GLU GLU A . n A 1 47 ASP 47 71 71 ASP ASP A . n A 1 48 VAL 48 72 72 VAL VAL A . n A 1 49 LYS 49 73 73 LYS LYS A . n A 1 50 ASP 50 74 74 ASP ASP A . n A 1 51 CYS 51 75 75 CYS CYS A . n A 1 52 LEU 52 76 76 LEU LEU A . n A 1 53 SER 53 77 77 SER SER A . n A 1 54 PRO 54 78 78 PRO PRO A . n A 1 55 GLU 55 79 79 GLU GLU A . n A 1 56 ILE 56 80 80 ILE ILE A . n A 1 57 PRO 57 81 81 PRO PRO A . n A 1 58 PHE 58 82 82 PHE PHE A . n A 1 59 GLY 59 83 83 GLY GLY A . n A 1 60 GLU 60 84 84 GLU GLU A . n A 1 61 CYS 61 85 85 CYS CYS A . n A 1 62 CYS 62 86 86 CYS CYS A . n A 1 63 PRO 63 87 87 PRO PRO A . n A 1 64 ILE 64 88 88 ILE ILE A . n A 1 65 CYS 65 89 89 CYS CYS A . n A 1 66 PRO 66 90 90 PRO PRO A . n A 1 67 THR 67 91 91 THR THR A . n A 1 68 ASP 68 92 92 ASP ASP A . n A 1 69 LEU 69 93 93 LEU LEU A . n A 1 70 ALA 70 94 94 ALA ALA A . n A 1 71 THR 71 95 95 THR THR A . n A 1 72 ALA 72 96 96 ALA ALA A . n A 1 73 SER 73 97 97 SER SER A . n A 1 74 GLY 74 98 98 GLY GLY A . n B 1 1 GLY 1 25 ? ? ? B . n B 1 2 SER 2 26 ? ? ? B . n B 1 3 MET 3 27 ? ? ? B . n B 1 4 ALA 4 28 ? ? ? B . n B 1 5 GLN 5 29 ? ? ? B . n B 1 6 GLU 6 30 30 GLU GLU B . n B 1 7 ALA 7 31 31 ALA ALA B . n B 1 8 GLY 8 32 32 GLY GLY B . n B 1 9 SER 9 33 33 SER SER B . n B 1 10 CYS 10 34 34 CYS CYS B . n B 1 11 VAL 11 35 35 VAL VAL B . n B 1 12 GLN 12 36 36 GLN GLN B . n B 1 13 ASP 13 37 37 ASP ASP B . n B 1 14 GLY 14 38 38 GLY GLY B . n B 1 15 GLN 15 39 39 GLN GLN B . n B 1 16 ARG 16 40 40 ARG ARG B . n B 1 17 TYR 17 41 41 TYR TYR B . n B 1 18 ASN 18 42 42 ASN ASN B . n B 1 19 ASP 19 43 43 ASP ASP B . n B 1 20 LYS 20 44 44 LYS LYS B . n B 1 21 ASP 21 45 45 ASP ASP B . n B 1 22 VAL 22 46 46 VAL VAL B . n B 1 23 TRP 23 47 47 TRP TRP B . n B 1 24 LYS 24 48 48 LYS LYS B . n B 1 25 PRO 25 49 49 PRO PRO B . n B 1 26 GLU 26 50 50 GLU GLU B . n B 1 27 PRO 27 51 51 PRO PRO B . n B 1 28 CYS 28 52 52 CYS CYS B . n B 1 29 ARG 29 53 53 ARG ARG B . n B 1 30 ILE 30 54 54 ILE ILE B . n B 1 31 CYS 31 55 55 CYS CYS B . n B 1 32 VAL 32 56 56 VAL VAL B . n B 1 33 CYS 33 57 57 CYS CYS B . n B 1 34 ASP 34 58 58 ASP ASP B . n B 1 35 THR 35 59 59 THR THR B . n B 1 36 GLY 36 60 60 GLY GLY B . n B 1 37 THR 37 61 61 THR THR B . n B 1 38 VAL 38 62 62 VAL VAL B . n B 1 39 LEU 39 63 63 LEU LEU B . n B 1 40 CYS 40 64 64 CYS CYS B . n B 1 41 ASP 41 65 65 ASP ASP B . n B 1 42 ASP 42 66 66 ASP ASP B . n B 1 43 ILE 43 67 67 ILE ILE B . n B 1 44 ILE 44 68 68 ILE ILE B . n B 1 45 CYS 45 69 69 CYS CYS B . n B 1 46 GLU 46 70 70 GLU GLU B . n B 1 47 ASP 47 71 71 ASP ASP B . n B 1 48 VAL 48 72 72 VAL VAL B . n B 1 49 LYS 49 73 73 LYS LYS B . n B 1 50 ASP 50 74 74 ASP ASP B . n B 1 51 CYS 51 75 75 CYS CYS B . n B 1 52 LEU 52 76 76 LEU LEU B . n B 1 53 SER 53 77 77 SER SER B . n B 1 54 PRO 54 78 78 PRO PRO B . n B 1 55 GLU 55 79 79 GLU GLU B . n B 1 56 ILE 56 80 80 ILE ILE B . n B 1 57 PRO 57 81 81 PRO PRO B . n B 1 58 PHE 58 82 82 PHE PHE B . n B 1 59 GLY 59 83 83 GLY GLY B . n B 1 60 GLU 60 84 84 GLU GLU B . n B 1 61 CYS 61 85 85 CYS CYS B . n B 1 62 CYS 62 86 86 CYS CYS B . n B 1 63 PRO 63 87 87 PRO PRO B . n B 1 64 ILE 64 88 88 ILE ILE B . n B 1 65 CYS 65 89 89 CYS CYS B . n B 1 66 PRO 66 90 90 PRO PRO B . n B 1 67 THR 67 91 91 THR THR B . n B 1 68 ASP 68 92 92 ASP ASP B . n B 1 69 LEU 69 93 93 LEU LEU B . n B 1 70 ALA 70 94 94 ALA ALA B . n B 1 71 THR 71 95 95 THR THR B . n B 1 72 ALA 72 96 ? ? ? B . n B 1 73 SER 73 97 ? ? ? B . n B 1 74 GLY 74 98 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO 1 101 11 EDO EDO A . D 2 EDO 1 102 12 EDO EDO A . E 2 EDO 1 103 13 EDO EDO A . F 2 EDO 1 104 14 EDO EDO A . G 2 EDO 1 105 15 EDO EDO A . H 2 EDO 1 106 16 EDO EDO A . I 2 EDO 1 107 17 EDO EDO A . J 3 PEG 1 108 3 PEG PEG A . K 3 PEG 1 109 8 PEG PEG A . L 4 PG4 1 110 1 PG4 1PE A . M 4 PG4 1 111 2 PG4 PG4 A . N 4 PG4 1 112 3 PG4 PG4 A . O 5 P33 1 101 1 P33 2PE B . P 2 EDO 1 102 3 EDO EDO B . Q 3 PEG 1 103 2 PEG PEG B . R 3 PEG 1 104 5 PEG PEG B . S 3 PEG 1 105 9 PEG PEG B . T 3 PEG 1 106 10 PEG PEG B . U 3 PEG 1 107 11 PEG PEG B . V 4 PG4 1 108 4 PG4 PG4 B . W 4 PG4 1 109 5 PG4 PG4 B . X 4 PG4 1 110 6 PG4 PG4 B . Y 6 HOH 1 201 13 HOH HOH A . Y 6 HOH 2 202 8 HOH HOH A . Y 6 HOH 3 203 2 HOH HOH A . Y 6 HOH 4 204 21 HOH HOH A . Y 6 HOH 5 205 4 HOH HOH A . Y 6 HOH 6 206 3 HOH HOH A . Y 6 HOH 7 207 17 HOH HOH A . Z 6 HOH 1 201 25 HOH HOH B . Z 6 HOH 2 202 23 HOH HOH B . Z 6 HOH 3 203 10 HOH HOH B . Z 6 HOH 4 204 12 HOH HOH B . Z 6 HOH 5 205 5 HOH HOH B . Z 6 HOH 6 206 7 HOH HOH B . Z 6 HOH 7 207 24 HOH HOH B . Z 6 HOH 8 208 18 HOH HOH B . Z 6 HOH 9 209 15 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F,G,H,I,J,K,L,M,N,Y 2 1 B,O,P,Q,R,S,T,U,V,W,X,Z # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-06-14 2 'Structure model' 1 1 2017-08-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? AutoPROC ? ? ? . 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? '(VERSION September 2' 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER ? ? ? 2.10.3 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? autoSHARP ? ? ? . 5 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 6 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 44 ? ? 81.15 1.01 2 1 THR B 59 ? ? 39.90 62.81 3 1 ASP B 74 ? ? -143.70 39.39 4 1 SER B 77 ? ? -141.93 59.73 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 30 ? CG ? A GLU 6 CG 2 1 Y 1 A GLU 30 ? CD ? A GLU 6 CD 3 1 Y 1 A GLU 30 ? OE1 ? A GLU 6 OE1 4 1 Y 1 A GLU 30 ? OE2 ? A GLU 6 OE2 5 1 Y 1 A ASP 37 ? CG ? A ASP 13 CG 6 1 Y 1 A ASP 37 ? OD1 ? A ASP 13 OD1 7 1 Y 1 A ASP 37 ? OD2 ? A ASP 13 OD2 8 1 Y 1 A LYS 73 ? CG ? A LYS 49 CG 9 1 Y 1 A LYS 73 ? CD ? A LYS 49 CD 10 1 Y 1 A LYS 73 ? CE ? A LYS 49 CE 11 1 Y 1 A LYS 73 ? NZ ? A LYS 49 NZ 12 1 Y 1 B GLU 30 ? CG ? B GLU 6 CG 13 1 Y 1 B GLU 30 ? CD ? B GLU 6 CD 14 1 Y 1 B GLU 30 ? OE1 ? B GLU 6 OE1 15 1 Y 1 B GLU 30 ? OE2 ? B GLU 6 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 25 ? A GLY 1 2 1 Y 1 A SER 26 ? A SER 2 3 1 Y 1 A MET 27 ? A MET 3 4 1 Y 1 A ALA 28 ? A ALA 4 5 1 Y 1 A GLN 29 ? A GLN 5 6 1 Y 1 B GLY 25 ? B GLY 1 7 1 Y 1 B SER 26 ? B SER 2 8 1 Y 1 B MET 27 ? B MET 3 9 1 Y 1 B ALA 28 ? B ALA 4 10 1 Y 1 B GLN 29 ? B GLN 5 11 1 Y 1 B ALA 96 ? B ALA 72 12 1 Y 1 B SER 97 ? B SER 73 13 1 Y 1 B GLY 98 ? B GLY 74 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 'DI(HYDROXYETHYL)ETHER' PEG 4 'TETRAETHYLENE GLYCOL' PG4 5 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL P33 6 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details 'No evidence for higher oligomeric state for the protein' #