HEADER PHOTOSYNTHESIS 04-MAY-17 5NVD TITLE CRYSTAL STRUCTURE OF HEXAMERIC CBS-CP12 PROTEIN FROM BLOOM-FORMING TITLE 2 CYANOBACTERIA AT 2.5 A RESOLUTION IN P6322 CRYSTAL FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: CBS-CP12; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: FIRST FOUR RESIDUES IN THE SEQUENCE ARE EXPRESSION TAG SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MICROCYSTIS AERUGINOSA PCC 7806; SOURCE 3 ORGANISM_TAXID: 267872; SOURCE 4 GENE: IPF_2164; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: LOBSTR KEYWDS CYSTATHIONINE BETA SYNTHASE DOMAIN, FUSION PROTEIN, REDOX-REGULATION KEYWDS 2 OF PHOTOSYNTHESIS, PHOTOSYNTHESIS EXPDTA X-RAY DIFFRACTION AUTHOR C.HACKENBERG,J.HAKANPAA,C.EIGNER,S.V.ANTONYUK,E.DITTMANN,V.S.LAMZIN REVDAT 5 17-JAN-24 5NVD 1 REMARK REVDAT 4 11-JUL-18 5NVD 1 JRNL REVDAT 3 20-JUN-18 5NVD 1 JRNL REVDAT 2 06-JUN-18 5NVD 1 REMARK REVDAT 1 30-MAY-18 5NVD 0 JRNL AUTH C.HACKENBERG,J.HAKANPAA,F.CAI,S.ANTONYUK,C.EIGNER, JRNL AUTH 2 S.MEISSNER,M.LAITAOJA,J.JANIS,C.A.KERFELD,E.DITTMANN, JRNL AUTH 3 V.S.LAMZIN JRNL TITL STRUCTURAL AND FUNCTIONAL INSIGHTS INTO THE UNIQUE CBS-CP12 JRNL TITL 2 FUSION PROTEIN FAMILY IN CYANOBACTERIA. JRNL REF PROC. NATL. ACAD. SCI. V. 115 7141 2018 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 29915055 JRNL DOI 10.1073/PNAS.1806668115 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0155 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 85.07 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 9924 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 495 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 709 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.86 REMARK 3 BIN R VALUE (WORKING SET) : 0.3530 REMARK 3 BIN FREE R VALUE SET COUNT : 29 REMARK 3 BIN FREE R VALUE : 0.4370 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1351 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 31 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 59.72 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.10000 REMARK 3 B22 (A**2) : 1.10000 REMARK 3 B33 (A**2) : -3.57000 REMARK 3 B12 (A**2) : 0.55000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.284 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.223 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.205 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 20.157 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1379 ; 0.014 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1382 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1868 ; 1.732 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3179 ; 1.012 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 175 ; 5.987 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 58 ;41.892 ;24.138 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 254 ;15.748 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;24.723 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 221 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1528 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 283 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 698 ; 2.621 ; 5.159 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 699 ; 2.620 ; 5.165 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 872 ; 4.200 ; 7.732 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 872 ; 4.203 ; 7.733 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 681 ; 3.442 ; 5.726 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 682 ; 3.440 ; 5.731 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 995 ; 5.643 ; 8.340 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 1466 ; 7.694 ;60.574 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 1463 ; 7.702 ;60.512 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 177 REMARK 3 ORIGIN FOR THE GROUP (A): -12.2030 -40.9420 -21.0590 REMARK 3 T TENSOR REMARK 3 T11: 0.0276 T22: 0.0650 REMARK 3 T33: 0.4181 T12: 0.0320 REMARK 3 T13: -0.0734 T23: -0.0698 REMARK 3 L TENSOR REMARK 3 L11: 1.1366 L22: 0.5727 REMARK 3 L33: 2.5636 L12: -0.0168 REMARK 3 L13: -1.2211 L23: -0.5923 REMARK 3 S TENSOR REMARK 3 S11: -0.0544 S12: 0.0078 S13: 0.1332 REMARK 3 S21: -0.0092 S22: -0.1114 S23: 0.1023 REMARK 3 S31: -0.0183 S32: 0.0475 S33: 0.1658 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5NVD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1200004797. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10477 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 100.620 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 18.50 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 17.60 REMARK 200 R MERGE FOR SHELL (I) : 1.35400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5NMU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN AT 6.08 MG/ML IN 50 MM REMARK 280 BICINE/KOH PH 7.8, 40 MM KCL, 0.132 MM AMP SOLUTION WAS MIXED REMARK 280 WITH RESERVOIR SOLUTION CONTAINING 0.15 M KSCN, 0.1 M HEPES PH REMARK 280 7.0 AND 18% PEG3350 CONTAINING 0.1 MM GUANIDINE HYDROCHLORIDE. REMARK 280 CRYOPROTECTOR - RESERVOIR SOLUTION WITH 25% ETHYLENE GLYCOL., REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 50.30950 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 50.30950 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 50.30950 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 50.30950 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 50.30950 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 50.30950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 46810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -110.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -49.11750 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -85.07401 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 49.11750 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 -85.07401 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.500000 -0.866025 0.000000 -49.11750 REMARK 350 BIOMT2 4 -0.866025 -0.500000 0.000000 -85.07401 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -50.30950 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 -50.30950 REMARK 350 BIOMT1 6 0.500000 0.866025 0.000000 49.11750 REMARK 350 BIOMT2 6 0.866025 -0.500000 0.000000 -85.07401 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 -50.30950 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 PRO A 2 REMARK 465 SER A 178 REMARK 465 HIS A 179 REMARK 465 GLN A 180 REMARK 465 ARG A 181 REMARK 465 ALA A 182 REMARK 465 LYS A 183 REMARK 465 LYS A 184 REMARK 465 GLN A 185 REMARK 465 GLY A 186 REMARK 465 SER A 187 REMARK 465 ASN A 188 REMARK 465 SER A 189 REMARK 465 PHE A 190 REMARK 465 GLN A 191 REMARK 465 ALA A 192 REMARK 465 TYR A 193 REMARK 465 CYS A 194 REMARK 465 GLU A 195 REMARK 465 ALA A 196 REMARK 465 ASN A 197 REMARK 465 PRO A 198 REMARK 465 ASP A 199 REMARK 465 ALA A 200 REMARK 465 LEU A 201 REMARK 465 GLU A 202 REMARK 465 CYS A 203 REMARK 465 ARG A 204 REMARK 465 ILE A 205 REMARK 465 TYR A 206 REMARK 465 ASP A 207 REMARK 465 ASP A 208 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 172 CG CD OE1 OE2 REMARK 470 GLU A 176 CD OE1 OE2 REMARK 470 ALA A 177 CA C O CB REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 96 NE - CZ - NH1 ANGL. DEV. = 5.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 35 67.10 37.55 REMARK 500 LYS A 112 23.30 -145.85 REMARK 500 REMARK 500 REMARK: NULL DBREF 5NVD A 5 208 UNP A8YJ50 A8YJ50_MICAE 2 205 SEQADV 5NVD GLY A 1 UNP A8YJ50 EXPRESSION TAG SEQADV 5NVD PRO A 2 UNP A8YJ50 EXPRESSION TAG SEQADV 5NVD MET A 3 UNP A8YJ50 EXPRESSION TAG SEQADV 5NVD VAL A 4 UNP A8YJ50 EXPRESSION TAG SEQRES 1 A 208 GLY PRO MET VAL LEU GLN ALA GLN GLU ILE MET THR GLN SEQRES 2 A 208 ASN VAL VAL THR ILE ARG GLY SER ALA THR VAL ALA ASP SEQRES 3 A 208 ALA VAL LYS LEU MET LYS GLU LYS LYS LEU ARG GLY LEU SEQRES 4 A 208 ILE VAL GLU PRO ARG HIS GLU GLN ASP PRO TYR GLY ILE SEQRES 5 A 208 VAL THR GLU THR ASP ILE VAL TYR LYS VAL ALA ALA PHE SEQRES 6 A 208 GLY HIS ASP PRO LYS THR MET ARG VAL TYR GLU ILE MET SEQRES 7 A 208 ALA LYS PRO CYS VAL VAL VAL ASN PRO GLU LEU GLY VAL SEQRES 8 A 208 GLU TYR VAL ALA ARG LEU PHE ALA GLN THR ARG ILE ARG SEQRES 9 A 208 ARG ALA PRO VAL ILE GLN GLY LYS THR LEU LEU GLY ILE SEQRES 10 A 208 ILE SER VAL SER ASP ILE LEU PHE LYS SER ASP PHE VAL SEQRES 11 A 208 GLU LYS PRO LYS ARG LEU PHE ILE GLU ASP GLU ILE GLU SEQRES 12 A 208 ALA ALA ARG GLU ASP ALA ARG ALA ILE CYS ALA ALA LYS SEQRES 13 A 208 GLY GLU THR SER PRO ASP CYS ALA ALA ALA TRP ASP VAL SEQRES 14 A 208 VAL GLU GLU LEU GLN ALA GLU ALA SER HIS GLN ARG ALA SEQRES 15 A 208 LYS LYS GLN GLY SER ASN SER PHE GLN ALA TYR CYS GLU SEQRES 16 A 208 ALA ASN PRO ASP ALA LEU GLU CYS ARG ILE TYR ASP ASP FORMUL 2 HOH *31(H2 O) HELIX 1 AA1 GLN A 6 MET A 11 1 6 HELIX 2 AA2 THR A 23 LYS A 34 1 12 HELIX 3 AA3 GLU A 55 VAL A 62 1 8 HELIX 4 AA4 ALA A 63 GLY A 66 5 4 HELIX 5 AA5 ARG A 73 MET A 78 1 6 HELIX 6 AA6 GLY A 90 ARG A 102 1 13 HELIX 7 AA7 VAL A 120 SER A 127 1 8 HELIX 8 AA8 ARG A 135 GLY A 157 1 23 HELIX 9 AA9 SER A 160 GLU A 176 1 17 SHEET 1 AA1 3 THR A 17 ILE A 18 0 SHEET 2 AA1 3 GLY A 38 VAL A 41 1 O ILE A 40 N ILE A 18 SHEET 3 AA1 3 GLY A 51 THR A 54 -1 O GLY A 51 N VAL A 41 SHEET 1 AA2 2 ARG A 105 GLN A 110 0 SHEET 2 AA2 2 THR A 113 SER A 119 -1 O LEU A 115 N VAL A 108 SSBOND 1 CYS A 153 CYS A 163 1555 1555 2.01 CISPEP 1 LYS A 80 PRO A 81 0 -6.37 CRYST1 98.235 98.235 100.619 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010180 0.005877 0.000000 0.00000 SCALE2 0.000000 0.011754 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009938 0.00000