HEADER ISOMERASE 05-MAY-17 5NW7 TITLE CRYSTAL STRUCTURE OF CANDIDA ALBICANS PHOSPHOMANNOSE ISOMERASE IN TITLE 2 COMPLEX WITH INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: MANNOSE-6-PHOSPHATE ISOMERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PHOSPHOHEXOMUTASE,PHOSPHOMANNOSE ISOMERASE,PMI; COMPND 5 EC: 5.3.1.8; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDA ALBICANS; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 5476; SOURCE 5 GENE: PMI1, MANA, CAALFM_C209640WA, CAO19.1390; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ALDOSE-KETOSE ISOMERASE, ISOMERASE, COMPLEX INHIBITOR EXPDTA X-RAY DIFFRACTION AUTHOR I.LI DE LA SIERRA-GALLAY,L.AHMAD,S.PLANCQUEEL,H.VAN TILBEURGH, AUTHOR 2 L.SALMON REVDAT 3 17-JAN-24 5NW7 1 REMARK REVDAT 2 13-JUN-18 5NW7 1 JRNL REVDAT 1 02-MAY-18 5NW7 0 JRNL AUTH L.AHMAD,S.PLANCQUEEL,V.DUBOSCLARD,N.LAZAR,W.GHATTAS, JRNL AUTH 2 I.LI DE LA SIERRA-GALLAY,H.VAN TILBEURGH,L.SALMON JRNL TITL CRYSTAL STRUCTURE OF PHOSPHOMANNOSE ISOMERASE FROM CANDIDA JRNL TITL 2 ALBICANS COMPLEXED WITH 5-PHOSPHO-D-ARABINONHYDRAZIDE. JRNL REF FEBS LETT. V. 592 1667 2018 JRNL REFN ISSN 1873-3468 JRNL PMID 29687459 JRNL DOI 10.1002/1873-3468.13059 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 34779 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1831 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2447 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.70 REMARK 3 BIN R VALUE (WORKING SET) : 0.3890 REMARK 3 BIN FREE R VALUE SET COUNT : 129 REMARK 3 BIN FREE R VALUE : 0.3650 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3431 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 17 REMARK 3 SOLVENT ATOMS : 247 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.43 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.80000 REMARK 3 B22 (A**2) : 1.09000 REMARK 3 B33 (A**2) : 0.71000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.139 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.127 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.112 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.058 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3520 ; 0.018 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3267 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4758 ; 1.873 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7649 ; 1.022 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 439 ; 7.148 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 158 ;42.070 ;26.013 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 627 ;14.600 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;19.661 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 534 ; 0.116 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3881 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 642 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5NW7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1200004812. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36611 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 45.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.9200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : 5.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.160 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1PMI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, MAGNESIUM CHLORIDE, BIS TRIS REMARK 280 BUFFER, PH 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 43.98500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 53.93000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.98500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 53.93000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -13 REMARK 465 ARG A -12 REMARK 465 GLY A -11 REMARK 465 SER A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 GLY A -3 REMARK 465 MET A -2 REMARK 465 ALA A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 70 NE - CZ - NH2 ANGL. DEV. = 3.8 DEGREES REMARK 500 ASP A 145 CB - CG - OD1 ANGL. DEV. = 6.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 15 46.06 -99.90 REMARK 500 ASP A 126 73.90 -156.32 REMARK 500 LYS A 282 -4.50 86.91 REMARK 500 ALA A 286 116.06 -166.37 REMARK 500 ALA A 298 96.74 -61.89 REMARK 500 ASN A 379 49.27 -87.82 REMARK 500 ASN A 427 141.54 163.91 REMARK 500 GLN A 428 28.36 -158.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 111 OE1 REMARK 620 2 HIS A 113 NE2 89.8 REMARK 620 3 GLU A 138 OE2 169.6 81.8 REMARK 620 4 HIS A 285 NE2 94.3 100.9 93.3 REMARK 620 5 9C2 A 502 N 93.1 161.1 92.9 97.6 REMARK 620 6 9C2 A 502 O1 79.8 82.6 93.0 173.2 79.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9C2 A 502 DBREF 5NW7 A 1 441 UNP P34948 MPI_CANAL 1 441 SEQADV 5NW7 MET A -13 UNP P34948 INITIATING METHIONINE SEQADV 5NW7 ARG A -12 UNP P34948 EXPRESSION TAG SEQADV 5NW7 GLY A -11 UNP P34948 EXPRESSION TAG SEQADV 5NW7 SER A -10 UNP P34948 EXPRESSION TAG SEQADV 5NW7 HIS A -9 UNP P34948 EXPRESSION TAG SEQADV 5NW7 HIS A -8 UNP P34948 EXPRESSION TAG SEQADV 5NW7 HIS A -7 UNP P34948 EXPRESSION TAG SEQADV 5NW7 HIS A -6 UNP P34948 EXPRESSION TAG SEQADV 5NW7 HIS A -5 UNP P34948 EXPRESSION TAG SEQADV 5NW7 HIS A -4 UNP P34948 EXPRESSION TAG SEQADV 5NW7 GLY A -3 UNP P34948 EXPRESSION TAG SEQADV 5NW7 MET A -2 UNP P34948 EXPRESSION TAG SEQADV 5NW7 ALA A -1 UNP P34948 EXPRESSION TAG SEQADV 5NW7 SER A 0 UNP P34948 EXPRESSION TAG SEQRES 1 A 455 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 A 455 SER MET SER SER GLU LYS LEU PHE ARG ILE GLN CYS GLY SEQRES 3 A 455 TYR GLN ASN TYR ASP TRP GLY LYS ILE GLY SER SER SER SEQRES 4 A 455 ALA VAL ALA GLN PHE VAL HIS ASN SER ASP PRO SER ILE SEQRES 5 A 455 THR ILE ASP GLU THR LYS PRO TYR ALA GLU LEU TRP MET SEQRES 6 A 455 GLY THR HIS PRO SER VAL PRO SER LYS ALA ILE ASP LEU SEQRES 7 A 455 ASN ASN GLN THR LEU ARG ASP LEU VAL THR ALA LYS PRO SEQRES 8 A 455 GLN GLU TYR LEU GLY GLU SER ILE ILE THR LYS PHE GLY SEQRES 9 A 455 SER SER LYS GLU LEU PRO PHE LEU PHE LYS VAL LEU SER SEQRES 10 A 455 ILE GLU LYS VAL LEU SER ILE GLN ALA HIS PRO ASP LYS SEQRES 11 A 455 LYS LEU GLY ALA GLN LEU HIS ALA ALA ASP PRO LYS ASN SEQRES 12 A 455 TYR PRO ASP ASP ASN HIS LYS PRO GLU MET ALA ILE ALA SEQRES 13 A 455 VAL THR ASP PHE GLU GLY PHE CYS GLY PHE LYS PRO LEU SEQRES 14 A 455 ASP GLN LEU ALA LYS THR LEU ALA THR VAL PRO GLU LEU SEQRES 15 A 455 ASN GLU ILE ILE GLY GLN GLU LEU VAL ASP GLU PHE ILE SEQRES 16 A 455 SER GLY ILE LYS LEU PRO ALA GLU VAL GLY SER GLN ASP SEQRES 17 A 455 ASP VAL ASN ASN ARG LYS LEU LEU GLN LYS VAL PHE GLY SEQRES 18 A 455 LYS LEU MET ASN THR ASP ASP ASP VAL ILE LYS GLN GLN SEQRES 19 A 455 THR ALA LYS LEU LEU GLU ARG THR ASP ARG GLU PRO GLN SEQRES 20 A 455 VAL PHE LYS ASP ILE ASP SER ARG LEU PRO GLU LEU ILE SEQRES 21 A 455 GLN ARG LEU ASN LYS GLN PHE PRO ASN ASP ILE GLY LEU SEQRES 22 A 455 PHE CYS GLY CYS LEU LEU LEU ASN HIS VAL GLY LEU ASN SEQRES 23 A 455 LYS GLY GLU ALA MET PHE LEU GLN ALA LYS ASP PRO HIS SEQRES 24 A 455 ALA TYR ILE SER GLY ASP ILE ILE GLU CYS MET ALA ALA SEQRES 25 A 455 SER ASP ASN VAL VAL ARG ALA GLY PHE THR PRO LYS PHE SEQRES 26 A 455 LYS ASP VAL LYS ASN LEU VAL GLU MET LEU THR TYR SER SEQRES 27 A 455 TYR GLU SER VAL GLU LYS GLN LYS MET PRO LEU GLN GLU SEQRES 28 A 455 PHE PRO ARG SER LYS GLY ASP ALA VAL LYS SER VAL LEU SEQRES 29 A 455 TYR ASP PRO PRO ILE ALA GLU PHE SER VAL LEU GLN THR SEQRES 30 A 455 ILE PHE ASP LYS SER LYS GLY GLY LYS GLN VAL ILE GLU SEQRES 31 A 455 GLY LEU ASN GLY PRO SER ILE VAL ILE ALA THR ASN GLY SEQRES 32 A 455 LYS GLY THR ILE GLN ILE THR GLY ASP ASP SER THR LYS SEQRES 33 A 455 GLN LYS ILE ASP THR GLY TYR VAL PHE PHE VAL ALA PRO SEQRES 34 A 455 GLY SER SER ILE GLU LEU THR ALA ASP SER ALA ASN GLN SEQRES 35 A 455 ASP GLN ASP PHE THR THR TYR ARG ALA PHE VAL GLU ALA HET ZN A 501 1 HET 9C2 A 502 16 HETNAM ZN ZINC ION HETNAM 9C2 [(2~{R},3~{R},4~{S})-5-DIAZANYL-2,3,4-TRIS(OXIDANYL)-5- HETNAM 2 9C2 OXIDANYLIDENE-PENTYL] DIHYDROGEN PHOSPHATE FORMUL 2 ZN ZN 2+ FORMUL 3 9C2 C5 H13 N2 O8 P FORMUL 4 HOH *247(H2 O) HELIX 1 AA1 ILE A 21 SER A 24 5 4 HELIX 2 AA2 SER A 25 ASP A 35 1 11 HELIX 3 AA3 THR A 68 LYS A 76 1 9 HELIX 4 AA4 LYS A 76 LEU A 81 1 6 HELIX 5 AA5 GLY A 82 GLY A 90 1 9 HELIX 6 AA6 ASP A 115 ASP A 126 1 12 HELIX 7 AA7 PRO A 154 VAL A 165 1 12 HELIX 8 AA8 VAL A 165 GLY A 173 1 9 HELIX 9 AA9 GLY A 173 ILE A 184 1 12 HELIX 10 AB1 SER A 192 ASN A 211 1 20 HELIX 11 AB2 ASP A 213 GLU A 231 1 19 HELIX 12 AB3 GLU A 231 ASP A 239 1 9 HELIX 13 AB4 ARG A 241 PHE A 253 1 13 HELIX 14 AB5 ILE A 257 GLY A 262 1 6 HELIX 15 AB6 ASP A 313 LEU A 321 1 9 HELIX 16 AB7 SER A 327 LYS A 332 5 6 HELIX 17 AB8 ASP A 398 LYS A 402 5 5 SHEET 1 AA1 7 SER A 59 ALA A 61 0 SHEET 2 AA1 7 LEU A 6 CYS A 11 -1 N GLN A 10 O LYS A 60 SHEET 3 AA1 7 VAL A 410 VAL A 413 -1 O PHE A 412 N PHE A 7 SHEET 4 AA1 7 SER A 382 ASN A 388 -1 N VAL A 384 O PHE A 411 SHEET 5 AA1 7 THR A 433 PHE A 438 -1 O TYR A 435 N ILE A 385 SHEET 6 AA1 7 SER A 359 ILE A 364 -1 N LEU A 361 O ARG A 436 SHEET 7 AA1 7 LYS A 347 TYR A 351 -1 N TYR A 351 O VAL A 360 SHEET 1 AA2 6 TYR A 13 GLN A 14 0 SHEET 2 AA2 6 GLU A 48 MET A 51 -1 O GLU A 48 N GLN A 14 SHEET 3 AA2 6 PHE A 97 ILE A 104 -1 O PHE A 99 N MET A 51 SHEET 4 AA2 6 HIS A 285 ALA A 297 -1 O GLU A 294 N LYS A 100 SHEET 5 AA2 6 PHE A 146 PHE A 152 -1 N GLU A 147 O ILE A 288 SHEET 6 AA2 6 LEU A 266 LEU A 271 -1 O VAL A 269 N GLY A 148 SHEET 1 AA3 6 TYR A 13 GLN A 14 0 SHEET 2 AA3 6 GLU A 48 MET A 51 -1 O GLU A 48 N GLN A 14 SHEET 3 AA3 6 PHE A 97 ILE A 104 -1 O PHE A 99 N MET A 51 SHEET 4 AA3 6 HIS A 285 ALA A 297 -1 O GLU A 294 N LYS A 100 SHEET 5 AA3 6 GLU A 138 ALA A 142 -1 N ILE A 141 O ILE A 293 SHEET 6 AA3 6 ALA A 276 LEU A 279 -1 O LEU A 279 N GLU A 138 SHEET 1 AA4 2 ILE A 110 ALA A 112 0 SHEET 2 AA4 2 VAL A 303 GLY A 306 -1 O VAL A 303 N ALA A 112 SHEET 1 AA5 5 SER A 341 GLY A 343 0 SHEET 2 AA5 5 LYS A 372 ILE A 375 -1 O VAL A 374 N LYS A 342 SHEET 3 AA5 5 ILE A 419 ALA A 423 -1 O ILE A 419 N ILE A 375 SHEET 4 AA5 5 LYS A 390 ILE A 395 -1 N GLN A 394 O GLU A 420 SHEET 5 AA5 5 GLN A 403 ASP A 406 -1 O ILE A 405 N GLY A 391 LINK OE1 GLN A 111 ZN ZN A 501 1555 1555 2.30 LINK NE2 HIS A 113 ZN ZN A 501 1555 1555 2.16 LINK OE2 GLU A 138 ZN ZN A 501 1555 1555 2.03 LINK NE2 HIS A 285 ZN ZN A 501 1555 1555 2.08 LINK ZN ZN A 501 N 9C2 A 502 1555 1555 2.00 LINK ZN ZN A 501 O1 9C2 A 502 1555 1555 2.10 CISPEP 1 LEU A 186 PRO A 187 0 -5.14 SITE 1 AC1 5 GLN A 111 HIS A 113 GLU A 138 HIS A 285 SITE 2 AC1 5 9C2 A 502 SITE 1 AC2 20 TYR A 16 TRP A 18 GLU A 48 LYS A 100 SITE 2 AC2 20 LEU A 108 SER A 109 GLN A 111 HIS A 113 SITE 3 AC2 20 LYS A 136 GLU A 138 HIS A 285 TYR A 287 SITE 4 AC2 20 GLU A 294 ARG A 304 LYS A 310 ZN A 501 SITE 5 AC2 20 HOH A 615 HOH A 648 HOH A 673 HOH A 732 CRYST1 87.970 107.860 44.030 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011368 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009271 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022712 0.00000