HEADER CELL ADHESION 10-MAY-17 5NXK TITLE L. REUTERI 53608 SRRP COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE-RICH SECRETED CELL WALL ANCHORED (LPXTG-MOTIF ) COMPND 3 PROTEIN; COMPND 4 CHAIN: A, B, C; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOBACILLUS REUTERI ATCC 53608; SOURCE 3 ORGANISM_TAXID: 927703; SOURCE 4 GENE: LRATCC53608_0906; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI DH5[ALPHA]; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 668369 KEYWDS BETA-SOLENOID, L. REUTERI, ADHESIN, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR S.SEQUEIRA,C.DONG REVDAT 2 28-MAR-18 5NXK 1 JRNL REVDAT 1 21-MAR-18 5NXK 0 JRNL AUTH S.SEQUEIRA,D.KAVANAUGH,D.A.MACKENZIE,T.SULIGOJ,S.WALPOLE, JRNL AUTH 2 C.LECLAIRE,A.P.GUNNING,D.LATOUSAKIS,W.G.T.WILLATS,J.ANGULO, JRNL AUTH 3 C.DONG,N.JUGE JRNL TITL STRUCTURAL BASIS FOR THE ROLE OF SERINE-RICH REPEAT PROTEINS JRNL TITL 2 FROM LACTOBACILLUS REUTERIIN GUT MICROBE-HOST INTERACTIONS. JRNL REF PROC. NATL. ACAD. SCI. V. 115 E2706 2018 JRNL REF 2 U.S.A. JRNL REFN ISSN 0027-8424 JRNL PMID 29507249 JRNL DOI 10.1073/PNAS.1715016115 REMARK 2 REMARK 2 RESOLUTION. 1.92 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.92 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.77 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 104681 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.183 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 5260 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.7709 - 5.9080 1.00 3472 203 0.1672 0.1747 REMARK 3 2 5.9080 - 4.7102 1.00 3399 166 0.1441 0.1480 REMARK 3 3 4.7102 - 4.1209 1.00 3352 179 0.1160 0.1463 REMARK 3 4 4.1209 - 3.7470 1.00 3347 166 0.1305 0.1459 REMARK 3 5 3.7470 - 3.4799 1.00 3341 189 0.1286 0.1498 REMARK 3 6 3.4799 - 3.2757 1.00 3345 165 0.1364 0.1777 REMARK 3 7 3.2757 - 3.1124 1.00 3307 171 0.1487 0.1776 REMARK 3 8 3.1124 - 2.9773 1.00 3354 168 0.1457 0.1596 REMARK 3 9 2.9773 - 2.8631 1.00 3303 194 0.1491 0.1722 REMARK 3 10 2.8631 - 2.7645 1.00 3307 158 0.1545 0.1913 REMARK 3 11 2.7645 - 2.6783 1.00 3334 161 0.1568 0.1920 REMARK 3 12 2.6783 - 2.6019 1.00 3305 191 0.1569 0.1827 REMARK 3 13 2.6019 - 2.5336 1.00 3323 157 0.1517 0.1850 REMARK 3 14 2.5336 - 2.4719 1.00 3283 196 0.1560 0.1852 REMARK 3 15 2.4719 - 2.4158 1.00 3277 174 0.1650 0.2119 REMARK 3 16 2.4158 - 2.3645 1.00 3315 182 0.1626 0.1953 REMARK 3 17 2.3645 - 2.3172 1.00 3296 173 0.1676 0.2135 REMARK 3 18 2.3172 - 2.2736 1.00 3307 179 0.1699 0.2149 REMARK 3 19 2.2736 - 2.2330 1.00 3289 158 0.1859 0.2211 REMARK 3 20 2.2330 - 2.1952 1.00 3296 172 0.1725 0.1839 REMARK 3 21 2.1952 - 2.1599 1.00 3244 185 0.1807 0.2150 REMARK 3 22 2.1599 - 2.1267 1.00 3322 165 0.1964 0.2352 REMARK 3 23 2.1267 - 2.0954 1.00 3286 198 0.2079 0.2412 REMARK 3 24 2.0954 - 2.0659 1.00 3288 167 0.2117 0.2644 REMARK 3 25 2.0659 - 2.0381 1.00 3246 182 0.2183 0.2469 REMARK 3 26 2.0381 - 2.0116 1.00 3308 175 0.2173 0.2454 REMARK 3 27 2.0116 - 1.9865 1.00 3312 163 0.2280 0.2527 REMARK 3 28 1.9865 - 1.9626 1.00 3277 174 0.2322 0.2620 REMARK 3 29 1.9626 - 1.9398 1.00 3263 186 0.2419 0.2675 REMARK 3 30 1.9398 - 1.9180 1.00 3323 163 0.2651 0.2755 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.060 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 6970 REMARK 3 ANGLE : 1.236 9474 REMARK 3 CHIRALITY : 0.054 1155 REMARK 3 PLANARITY : 0.005 1240 REMARK 3 DIHEDRAL : 12.081 2488 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 69.0294 18.8141 -6.4054 REMARK 3 T TENSOR REMARK 3 T11: 0.1710 T22: 0.0986 REMARK 3 T33: 0.1235 T12: -0.0155 REMARK 3 T13: -0.0104 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 0.1879 L22: 0.2933 REMARK 3 L33: 0.1769 L12: 0.0603 REMARK 3 L13: 0.0161 L23: 0.1005 REMARK 3 S TENSOR REMARK 3 S11: -0.0441 S12: -0.0222 S13: -0.0162 REMARK 3 S21: -0.0815 S22: -0.0132 S23: 0.0124 REMARK 3 S31: -0.0323 S32: 0.0158 S33: -0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5NXK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1200004892. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-MAR-14 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 104897 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.920 REMARK 200 RESOLUTION RANGE LOW (A) : 73.350 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 18.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.92 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 15.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXCD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM MALONATE, 12% W/V PEG3350, REMARK 280 PH 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.61533 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 36.80767 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 36.80767 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 73.61533 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 712 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 837 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 568 REMARK 465 SER A 569 REMARK 465 GLY A 570 REMARK 465 PRO A 571 REMARK 465 GLY B 567 REMARK 465 ALA B 568 REMARK 465 SER B 569 REMARK 465 GLY B 570 REMARK 465 PRO B 571 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 846 O HOH A 850 1.81 REMARK 500 O HOH B 688 O HOH B 842 1.84 REMARK 500 O HOH A 827 O HOH A 864 1.90 REMARK 500 O HOH C 648 O HOH C 741 1.96 REMARK 500 O HOH B 819 O HOH B 933 1.96 REMARK 500 O HOH C 693 O HOH C 849 2.00 REMARK 500 O HOH A 696 O HOH A 815 2.04 REMARK 500 O HOH C 826 O HOH C 886 2.06 REMARK 500 O HOH B 954 O HOH B 972 2.07 REMARK 500 O HOH C 826 O HOH C 864 2.10 REMARK 500 O HOH A 834 O HOH A 847 2.11 REMARK 500 O HOH B 831 O HOH B 839 2.11 REMARK 500 O HOH B 964 O HOH B 976 2.12 REMARK 500 O HOH A 774 O HOH A 811 2.12 REMARK 500 OE2 GLU C 475 O HOH C 601 2.12 REMARK 500 O HOH B 734 O HOH B 865 2.12 REMARK 500 O HOH B 932 O HOH B 955 2.13 REMARK 500 O HOH B 767 O HOH B 884 2.14 REMARK 500 O HOH A 776 O HOH A 834 2.14 REMARK 500 O HOH A 787 O HOH A 836 2.15 REMARK 500 O HOH B 884 O HOH B 903 2.15 REMARK 500 O HOH B 753 O HOH B 888 2.15 REMARK 500 OE2 GLU A 338 O HOH A 601 2.16 REMARK 500 O HOH A 693 O HOH A 705 2.17 REMARK 500 O HOH B 845 O HOH B 924 2.17 REMARK 500 O HOH A 826 O HOH A 839 2.17 REMARK 500 O HOH A 826 O HOH C 748 2.19 REMARK 500 O HOH A 698 O HOH A 835 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 915 O HOH C 914 2654 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO C 456 C - N - CA ANGL. DEV. = -10.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 263 117.61 171.54 REMARK 500 ASN A 298 32.71 -147.34 REMARK 500 ASN A 325 40.82 -148.78 REMARK 500 ALA A 380 -141.57 -140.25 REMARK 500 ALA A 444 -31.92 -140.62 REMARK 500 ASN A 479 -50.15 -141.17 REMARK 500 VAL A 508 -70.22 -105.08 REMARK 500 ASN B 298 31.95 -147.26 REMARK 500 ASN B 325 40.03 -146.81 REMARK 500 ALA B 380 -142.78 -138.99 REMARK 500 ASP B 402 53.37 39.34 REMARK 500 ALA B 444 -29.84 -140.96 REMARK 500 PRO B 456 44.38 -90.40 REMARK 500 ASN B 479 -50.30 -141.75 REMARK 500 VAL B 508 -68.94 -104.13 REMARK 500 ASN C 298 29.73 -147.56 REMARK 500 ASN C 325 38.99 -147.06 REMARK 500 ALA C 380 -142.71 -136.62 REMARK 500 ALA C 444 -27.34 -141.96 REMARK 500 ASN C 479 -49.96 -140.74 REMARK 500 VAL C 508 -70.31 -103.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 980 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH B 981 DISTANCE = 6.03 ANGSTROMS REMARK 525 HOH C 942 DISTANCE = 5.85 ANGSTROMS DBREF1 5NXK A 262 571 UNP A0A0S4NNC0_LACRE DBREF2 5NXK A A0A0S4NNC0 262 571 DBREF1 5NXK B 262 571 UNP A0A0S4NNC0_LACRE DBREF2 5NXK B A0A0S4NNC0 262 571 DBREF1 5NXK C 262 571 UNP A0A0S4NNC0_LACRE DBREF2 5NXK C A0A0S4NNC0 262 571 SEQRES 1 A 310 ILE GLU GLU VAL SER ASN GLU GLU GLU LEU LYS ALA ALA SEQRES 2 A 310 LEU ARG ASP ALA SER ILE THR THR ILE LYS LEU LYS ASN SEQRES 3 A 310 ASN ILE THR LEU ASN ASN ALA ILE THR ILE ASN ASN GLY SEQRES 4 A 310 ASN ARG ASN ILE THR ILE ILE GLY ASP GLY HIS TYR ILE SEQRES 5 A 310 ASN ALA LEU ASN SER ASP GLY GLY ILE ILE LEU ASN ASN SEQRES 6 A 310 ARG GLY GLY SER ALA LYS ILE ASP LEU THR ILE GLU ASN SEQRES 7 A 310 ALA THR LEU TYR ASN THR SER LYS TYR GLY PHE VAL ASN SEQRES 8 A 310 MET SER SER ASN GLY VAL ASP THR VAL THR TYR LYS ASP SEQRES 9 A 310 VAL THR ALA TYR GLY GLY THR LEU VAL TRP SER LYS THR SEQRES 10 A 310 GLY ALA GLY VAL LYS THR LEU ASN LEU VAL GLY ASN THR SEQRES 11 A 310 THR LEU ASN SER VAL LYS SER TYR GLU VAL ASP GLY GLN SEQRES 12 A 310 SER CYS GLY THR GLU ALA PHE SER HIS ARG THR PRO ASP SEQRES 13 A 310 GLY ASP LYS THR THR ALA LEU TYR VAL SER ASN ALA ILE SEQRES 14 A 310 ASN ILE ALA GLU ASN ALA ASN VAL VAL LEU ASN ASN SER SEQRES 15 A 310 ALA THR ASP ILE ASP MET TRP LEU LEU THR ALA VAL PRO SEQRES 16 A 310 SER THR SER GLY ILE SER THR VAL THR VAL GLY ASN ASN SEQRES 17 A 310 ALA SER LEU THR MET GLU ASN ILE GLY ASN THR GLU TYR SEQRES 18 A 310 ASN ILE LYS LEU ASP GLY GLY ARG GLU ASN HIS PHE ILE SEQRES 19 A 310 VAL ASN GLU ASN ALA ALA VAL LYS MET SER ALA LYS VAL SEQRES 20 A 310 ASP ASN VAL ARG ILE ILE PRO GLN LEU GLU ASN ILE PHE SEQRES 21 A 310 THR ARG GLY ASN ILE GLU LEU ALA LYS GLY SER ASN VAL SEQRES 22 A 310 HIS LEU GLU VAL ILE THR GLY SER ASN PHE ARG VAL ALA SEQRES 23 A 310 GLY THR VAL ALA ASN ARG ILE ASP PHE ASN GLY THR ALA SEQRES 24 A 310 THR LEU ILE LYS GLN GLU GLY ALA SER GLY PRO SEQRES 1 B 310 ILE GLU GLU VAL SER ASN GLU GLU GLU LEU LYS ALA ALA SEQRES 2 B 310 LEU ARG ASP ALA SER ILE THR THR ILE LYS LEU LYS ASN SEQRES 3 B 310 ASN ILE THR LEU ASN ASN ALA ILE THR ILE ASN ASN GLY SEQRES 4 B 310 ASN ARG ASN ILE THR ILE ILE GLY ASP GLY HIS TYR ILE SEQRES 5 B 310 ASN ALA LEU ASN SER ASP GLY GLY ILE ILE LEU ASN ASN SEQRES 6 B 310 ARG GLY GLY SER ALA LYS ILE ASP LEU THR ILE GLU ASN SEQRES 7 B 310 ALA THR LEU TYR ASN THR SER LYS TYR GLY PHE VAL ASN SEQRES 8 B 310 MET SER SER ASN GLY VAL ASP THR VAL THR TYR LYS ASP SEQRES 9 B 310 VAL THR ALA TYR GLY GLY THR LEU VAL TRP SER LYS THR SEQRES 10 B 310 GLY ALA GLY VAL LYS THR LEU ASN LEU VAL GLY ASN THR SEQRES 11 B 310 THR LEU ASN SER VAL LYS SER TYR GLU VAL ASP GLY GLN SEQRES 12 B 310 SER CYS GLY THR GLU ALA PHE SER HIS ARG THR PRO ASP SEQRES 13 B 310 GLY ASP LYS THR THR ALA LEU TYR VAL SER ASN ALA ILE SEQRES 14 B 310 ASN ILE ALA GLU ASN ALA ASN VAL VAL LEU ASN ASN SER SEQRES 15 B 310 ALA THR ASP ILE ASP MET TRP LEU LEU THR ALA VAL PRO SEQRES 16 B 310 SER THR SER GLY ILE SER THR VAL THR VAL GLY ASN ASN SEQRES 17 B 310 ALA SER LEU THR MET GLU ASN ILE GLY ASN THR GLU TYR SEQRES 18 B 310 ASN ILE LYS LEU ASP GLY GLY ARG GLU ASN HIS PHE ILE SEQRES 19 B 310 VAL ASN GLU ASN ALA ALA VAL LYS MET SER ALA LYS VAL SEQRES 20 B 310 ASP ASN VAL ARG ILE ILE PRO GLN LEU GLU ASN ILE PHE SEQRES 21 B 310 THR ARG GLY ASN ILE GLU LEU ALA LYS GLY SER ASN VAL SEQRES 22 B 310 HIS LEU GLU VAL ILE THR GLY SER ASN PHE ARG VAL ALA SEQRES 23 B 310 GLY THR VAL ALA ASN ARG ILE ASP PHE ASN GLY THR ALA SEQRES 24 B 310 THR LEU ILE LYS GLN GLU GLY ALA SER GLY PRO SEQRES 1 C 310 ILE GLU GLU VAL SER ASN GLU GLU GLU LEU LYS ALA ALA SEQRES 2 C 310 LEU ARG ASP ALA SER ILE THR THR ILE LYS LEU LYS ASN SEQRES 3 C 310 ASN ILE THR LEU ASN ASN ALA ILE THR ILE ASN ASN GLY SEQRES 4 C 310 ASN ARG ASN ILE THR ILE ILE GLY ASP GLY HIS TYR ILE SEQRES 5 C 310 ASN ALA LEU ASN SER ASP GLY GLY ILE ILE LEU ASN ASN SEQRES 6 C 310 ARG GLY GLY SER ALA LYS ILE ASP LEU THR ILE GLU ASN SEQRES 7 C 310 ALA THR LEU TYR ASN THR SER LYS TYR GLY PHE VAL ASN SEQRES 8 C 310 MET SER SER ASN GLY VAL ASP THR VAL THR TYR LYS ASP SEQRES 9 C 310 VAL THR ALA TYR GLY GLY THR LEU VAL TRP SER LYS THR SEQRES 10 C 310 GLY ALA GLY VAL LYS THR LEU ASN LEU VAL GLY ASN THR SEQRES 11 C 310 THR LEU ASN SER VAL LYS SER TYR GLU VAL ASP GLY GLN SEQRES 12 C 310 SER CYS GLY THR GLU ALA PHE SER HIS ARG THR PRO ASP SEQRES 13 C 310 GLY ASP LYS THR THR ALA LEU TYR VAL SER ASN ALA ILE SEQRES 14 C 310 ASN ILE ALA GLU ASN ALA ASN VAL VAL LEU ASN ASN SER SEQRES 15 C 310 ALA THR ASP ILE ASP MET TRP LEU LEU THR ALA VAL PRO SEQRES 16 C 310 SER THR SER GLY ILE SER THR VAL THR VAL GLY ASN ASN SEQRES 17 C 310 ALA SER LEU THR MET GLU ASN ILE GLY ASN THR GLU TYR SEQRES 18 C 310 ASN ILE LYS LEU ASP GLY GLY ARG GLU ASN HIS PHE ILE SEQRES 19 C 310 VAL ASN GLU ASN ALA ALA VAL LYS MET SER ALA LYS VAL SEQRES 20 C 310 ASP ASN VAL ARG ILE ILE PRO GLN LEU GLU ASN ILE PHE SEQRES 21 C 310 THR ARG GLY ASN ILE GLU LEU ALA LYS GLY SER ASN VAL SEQRES 22 C 310 HIS LEU GLU VAL ILE THR GLY SER ASN PHE ARG VAL ALA SEQRES 23 C 310 GLY THR VAL ALA ASN ARG ILE ASP PHE ASN GLY THR ALA SEQRES 24 C 310 THR LEU ILE LYS GLN GLU GLY ALA SER GLY PRO FORMUL 4 HOH *999(H2 O) HELIX 1 AA1 ASN A 267 ARG A 276 1 10 HELIX 2 AA2 ASN B 267 ARG B 276 1 10 HELIX 3 AA3 ASN C 267 ARG C 276 1 10 HELIX 4 AA4 GLU C 566 GLY C 570 5 5 SHEET 1 AA111 GLU A 264 VAL A 265 0 SHEET 2 AA111 THR A 282 LEU A 285 1 O LYS A 284 N VAL A 265 SHEET 3 AA111 ARG A 302 ILE A 307 1 O ILE A 307 N ILE A 283 SHEET 4 AA111 LYS A 332 ASN A 344 1 O THR A 336 N ILE A 306 SHEET 5 AA111 VAL A 358 GLY A 370 1 O TYR A 369 N LEU A 342 SHEET 6 AA111 LYS A 383 VAL A 388 1 O ASN A 386 N VAL A 361 SHEET 7 AA111 ALA A 429 ILE A 432 1 O ASN A 431 N LEU A 387 SHEET 8 AA111 ILE A 461 VAL A 466 1 O THR A 465 N ILE A 432 SHEET 9 AA111 GLU A 491 VAL A 496 1 O ILE A 495 N VAL A 466 SHEET 10 AA111 THR A 522 LEU A 528 1 O GLU A 527 N VAL A 496 SHEET 11 AA111 VAL A 550 PHE A 556 1 O ASP A 555 N ILE A 526 SHEET 1 AA210 ILE A 289 LEU A 291 0 SHEET 2 AA210 TYR A 312 ALA A 315 1 O ASN A 314 N ILE A 289 SHEET 3 AA210 LYS A 332 ASN A 344 1 O TYR A 343 N ALA A 315 SHEET 4 AA210 VAL A 358 GLY A 370 1 O TYR A 369 N LEU A 342 SHEET 5 AA210 ASN A 390 SER A 395 1 O ASN A 394 N ALA A 368 SHEET 6 AA210 ASN A 437 ASN A 442 1 O ASN A 441 N SER A 395 SHEET 7 AA210 SER A 471 GLU A 475 1 O SER A 471 N VAL A 438 SHEET 8 AA210 ALA A 501 SER A 505 1 O LYS A 503 N MET A 474 SHEET 9 AA210 ASN A 533 VAL A 538 1 O ASN A 533 N VAL A 502 SHEET 10 AA210 THR A 559 LYS A 564 1 O ILE A 563 N LEU A 536 SHEET 1 AA3 4 ILE A 295 ILE A 297 0 SHEET 2 AA3 4 ILE A 322 LEU A 324 1 O ILE A 323 N ILE A 297 SHEET 3 AA3 4 VAL A 351 MET A 353 1 O ASN A 352 N LEU A 324 SHEET 4 AA3 4 VAL A 374 SER A 376 1 O TRP A 375 N MET A 353 SHEET 1 AA4 2 SER A 398 VAL A 401 0 SHEET 2 AA4 2 GLN A 404 GLY A 407 -1 O CYS A 406 N TYR A 399 SHEET 1 AA5 2 SER A 412 HIS A 413 0 SHEET 2 AA5 2 LYS A 420 THR A 421 -1 O LYS A 420 N HIS A 413 SHEET 1 AA6 4 ILE A 447 LEU A 452 0 SHEET 2 AA6 4 TYR A 482 ASP A 487 1 O ASP A 487 N LEU A 451 SHEET 3 AA6 4 ASP A 509 ILE A 513 1 O ARG A 512 N ILE A 484 SHEET 4 AA6 4 PHE A 544 VAL A 546 1 O ARG A 545 N VAL A 511 SHEET 1 AA711 GLU B 263 VAL B 265 0 SHEET 2 AA711 THR B 282 LEU B 285 1 O LYS B 284 N GLU B 263 SHEET 3 AA711 ARG B 302 ILE B 307 1 O ILE B 307 N ILE B 283 SHEET 4 AA711 LYS B 332 ASN B 344 1 O THR B 336 N ILE B 304 SHEET 5 AA711 VAL B 358 GLY B 370 1 O THR B 362 N ILE B 337 SHEET 6 AA711 LYS B 383 VAL B 388 1 O ASN B 386 N VAL B 361 SHEET 7 AA711 ALA B 429 ILE B 432 1 O ASN B 431 N LEU B 387 SHEET 8 AA711 ILE B 461 VAL B 466 1 O THR B 465 N ILE B 432 SHEET 9 AA711 GLU B 491 VAL B 496 1 O ILE B 495 N VAL B 464 SHEET 10 AA711 THR B 522 LEU B 528 1 O GLU B 527 N VAL B 496 SHEET 11 AA711 VAL B 550 PHE B 556 1 O ASP B 555 N LEU B 528 SHEET 1 AA810 ILE B 289 LEU B 291 0 SHEET 2 AA810 TYR B 312 ALA B 315 1 O ASN B 314 N LEU B 291 SHEET 3 AA810 LYS B 332 ASN B 344 1 O TYR B 343 N ALA B 315 SHEET 4 AA810 VAL B 358 GLY B 370 1 O THR B 362 N ILE B 337 SHEET 5 AA810 ASN B 390 SER B 395 1 O THR B 392 N ALA B 368 SHEET 6 AA810 ASN B 437 ASN B 442 1 O ASN B 441 N LEU B 393 SHEET 7 AA810 SER B 471 GLU B 475 1 O SER B 471 N VAL B 438 SHEET 8 AA810 ALA B 501 SER B 505 1 O LYS B 503 N MET B 474 SHEET 9 AA810 ASN B 533 VAL B 538 1 O HIS B 535 N VAL B 502 SHEET 10 AA810 THR B 559 LYS B 564 1 O ILE B 563 N LEU B 536 SHEET 1 AA9 4 ILE B 295 ILE B 297 0 SHEET 2 AA9 4 ILE B 322 LEU B 324 1 O ILE B 323 N ILE B 297 SHEET 3 AA9 4 VAL B 351 MET B 353 1 O ASN B 352 N LEU B 324 SHEET 4 AA9 4 VAL B 374 SER B 376 1 O TRP B 375 N MET B 353 SHEET 1 AB1 2 SER B 398 VAL B 401 0 SHEET 2 AB1 2 GLN B 404 GLY B 407 -1 O CYS B 406 N TYR B 399 SHEET 1 AB2 2 SER B 412 HIS B 413 0 SHEET 2 AB2 2 LYS B 420 THR B 421 -1 O LYS B 420 N HIS B 413 SHEET 1 AB3 4 ILE B 447 LEU B 452 0 SHEET 2 AB3 4 TYR B 482 ASP B 487 1 O ASP B 487 N LEU B 451 SHEET 3 AB3 4 ASP B 509 ILE B 513 1 O ARG B 512 N ILE B 484 SHEET 4 AB3 4 PHE B 544 VAL B 546 1 O ARG B 545 N VAL B 511 SHEET 1 AB411 GLU C 263 VAL C 265 0 SHEET 2 AB411 THR C 282 LEU C 285 1 O LYS C 284 N GLU C 263 SHEET 3 AB411 ARG C 302 ILE C 307 1 O ILE C 307 N ILE C 283 SHEET 4 AB411 LYS C 332 ASN C 344 1 O THR C 336 N ILE C 306 SHEET 5 AB411 VAL C 358 GLY C 370 1 O THR C 360 N LEU C 335 SHEET 6 AB411 LYS C 383 VAL C 388 1 O ASN C 386 N VAL C 361 SHEET 7 AB411 ALA C 429 ILE C 432 1 O ASN C 431 N LEU C 387 SHEET 8 AB411 ILE C 461 VAL C 466 1 O THR C 465 N ILE C 432 SHEET 9 AB411 GLU C 491 VAL C 496 1 O ILE C 495 N VAL C 464 SHEET 10 AB411 THR C 522 LEU C 528 1 O GLU C 527 N VAL C 496 SHEET 11 AB411 VAL C 550 PHE C 556 1 O ASP C 555 N ILE C 526 SHEET 1 AB510 ILE C 289 LEU C 291 0 SHEET 2 AB510 TYR C 312 ALA C 315 1 O ASN C 314 N LEU C 291 SHEET 3 AB510 LYS C 332 ASN C 344 1 O TYR C 343 N ALA C 315 SHEET 4 AB510 VAL C 358 GLY C 370 1 O THR C 360 N LEU C 335 SHEET 5 AB510 ASN C 390 SER C 395 1 O THR C 392 N ALA C 368 SHEET 6 AB510 ASN C 437 ASN C 442 1 O VAL C 439 N LEU C 393 SHEET 7 AB510 SER C 471 GLU C 475 1 O SER C 471 N VAL C 438 SHEET 8 AB510 ALA C 501 SER C 505 1 O LYS C 503 N MET C 474 SHEET 9 AB510 ASN C 533 VAL C 538 1 O HIS C 535 N VAL C 502 SHEET 10 AB510 THR C 559 LYS C 564 1 O THR C 561 N LEU C 536 SHEET 1 AB6 4 ILE C 295 ILE C 297 0 SHEET 2 AB6 4 ILE C 322 LEU C 324 1 O ILE C 323 N ILE C 295 SHEET 3 AB6 4 VAL C 351 MET C 353 1 O ASN C 352 N LEU C 324 SHEET 4 AB6 4 VAL C 374 SER C 376 1 O TRP C 375 N MET C 353 SHEET 1 AB7 2 SER C 398 VAL C 401 0 SHEET 2 AB7 2 GLN C 404 GLY C 407 -1 O CYS C 406 N TYR C 399 SHEET 1 AB8 2 PHE C 411 HIS C 413 0 SHEET 2 AB8 2 LYS C 420 THR C 422 -1 O LYS C 420 N HIS C 413 SHEET 1 AB9 4 ILE C 447 LEU C 452 0 SHEET 2 AB9 4 TYR C 482 ASP C 487 1 O ASP C 487 N LEU C 451 SHEET 3 AB9 4 ASP C 509 ILE C 513 1 O ARG C 512 N LEU C 486 SHEET 4 AB9 4 PHE C 544 VAL C 546 1 O ARG C 545 N VAL C 511 CISPEP 1 VAL B 455 PRO B 456 0 -5.39 CRYST1 146.697 146.697 110.423 90.00 90.00 120.00 P 32 2 1 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006817 0.003936 0.000000 0.00000 SCALE2 0.000000 0.007871 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009056 0.00000