HEADER TRANSCRIPTION 12-MAY-17 5NZ0
TITLE STRUCTURE OF TRANSCRIPTIONAL REGULATORY REPRESSOR PROTEIN - ETHR FROM
TITLE 2 MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH LINEZOLID
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: HTH-TYPE TRANSCRIPTIONAL REGULATOR ETHR;
COMPND 3 CHAIN: A;
COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS;
SOURCE 3 ORGANISM_TAXID: 83332;
SOURCE 4 STRAIN: ATCC 25618 / H37RV;
SOURCE 5 GENE: ETHR, ETAR, RV3855;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008
KEYWDS ETHR, TRANSCRIPTION, REPRESOR, BOOSTING EFFECT
EXPDTA X-RAY DIFFRACTION
AUTHOR M.BLASZCZYK,V.MENDES,P.O.NIKIFOROV,T.L.BLUNDELL
REVDAT 2 17-JAN-24 5NZ0 1 REMARK
REVDAT 1 30-MAY-18 5NZ0 0
JRNL AUTH P.O.NIKIFOROV,M.BLASZCZYK,V.MENDES,H.I.BOSHOFF,C.E.BARRY,
JRNL AUTH 2 T.L.BLUNDELL,C.ABELL
JRNL TITL THE ANTIBIOTICS LINEZOLID AND SUTEZOLID ARE LIGANDS FOR
JRNL TITL 2 MYCOBACTERIUM TUBERCULOSIS ETHR
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. 1.83 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX 1.10_2155
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : NULL
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.83
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.23
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.880
REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0
REMARK 3 NUMBER OF REFLECTIONS : 23088
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.186
REMARK 3 R VALUE (WORKING SET) : 0.184
REMARK 3 FREE R VALUE : 0.220
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130
REMARK 3 FREE R VALUE TEST SET COUNT : 1184
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 20.2316 - 3.6434 1.00 2933 154 0.1790 0.2026
REMARK 3 2 3.6434 - 2.8946 1.00 2779 149 0.1751 0.2302
REMARK 3 3 2.8946 - 2.5295 1.00 2760 121 0.1782 0.2020
REMARK 3 4 2.5295 - 2.2985 1.00 2723 147 0.1716 0.2125
REMARK 3 5 2.2985 - 2.1340 1.00 2697 135 0.1870 0.2132
REMARK 3 6 2.1340 - 2.0083 1.00 2688 165 0.1867 0.2362
REMARK 3 7 2.0083 - 1.9078 1.00 2673 150 0.2304 0.2674
REMARK 3 8 1.9078 - 1.8248 1.00 2651 163 0.2782 0.2968
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : NULL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.540
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 27.43
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.41
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.006 1540
REMARK 3 ANGLE : 0.797 2099
REMARK 3 CHIRALITY : 0.045 239
REMARK 3 PLANARITY : 0.004 273
REMARK 3 DIHEDRAL : 16.797 914
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 6
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 22 THROUGH 46 )
REMARK 3 ORIGIN FOR THE GROUP (A): -51.1356 24.2891 -14.5675
REMARK 3 T TENSOR
REMARK 3 T11: 0.2431 T22: 0.4357
REMARK 3 T33: 0.3390 T12: 0.1454
REMARK 3 T13: -0.0150 T23: 0.0282
REMARK 3 L TENSOR
REMARK 3 L11: 6.4465 L22: 8.1580
REMARK 3 L33: 8.2649 L12: 1.5329
REMARK 3 L13: -3.2609 L23: -0.0470
REMARK 3 S TENSOR
REMARK 3 S11: -0.0075 S12: 0.9485 S13: 0.3969
REMARK 3 S21: -0.4720 S22: 0.1123 S23: -0.0122
REMARK 3 S31: 0.3281 S32: -0.3070 S33: -0.0413
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 47 THROUGH 67 )
REMARK 3 ORIGIN FOR THE GROUP (A): -58.6312 28.4530 -9.7656
REMARK 3 T TENSOR
REMARK 3 T11: 0.2569 T22: 0.5570
REMARK 3 T33: 0.4600 T12: 0.2906
REMARK 3 T13: -0.0081 T23: -0.1266
REMARK 3 L TENSOR
REMARK 3 L11: 7.0326 L22: 0.5475
REMARK 3 L33: 3.7841 L12: -0.2586
REMARK 3 L13: 0.7873 L23: 0.7124
REMARK 3 S TENSOR
REMARK 3 S11: 0.0727 S12: 0.3345 S13: 0.9815
REMARK 3 S21: -0.1693 S22: -0.1100 S23: -0.3254
REMARK 3 S31: -0.2859 S32: 0.1583 S33: -0.0791
REMARK 3 TLS GROUP : 3
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 68 THROUGH 98 )
REMARK 3 ORIGIN FOR THE GROUP (A): -40.1054 12.6490 -5.3413
REMARK 3 T TENSOR
REMARK 3 T11: 0.1730 T22: 0.4687
REMARK 3 T33: 0.2191 T12: -0.0972
REMARK 3 T13: 0.0269 T23: -0.0238
REMARK 3 L TENSOR
REMARK 3 L11: 7.7639 L22: 8.4924
REMARK 3 L33: 3.9819 L12: -5.1529
REMARK 3 L13: -0.3313 L23: 1.1119
REMARK 3 S TENSOR
REMARK 3 S11: -0.0691 S12: -0.5830 S13: -0.5401
REMARK 3 S21: 0.0265 S22: 0.1389 S23: 0.5797
REMARK 3 S31: 0.4342 S32: -0.8628 S33: -0.0733
REMARK 3 TLS GROUP : 4
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 99 THROUGH 129 )
REMARK 3 ORIGIN FOR THE GROUP (A): -31.8272 14.3907 -11.3210
REMARK 3 T TENSOR
REMARK 3 T11: 0.1930 T22: 0.2902
REMARK 3 T33: 0.2296 T12: -0.0796
REMARK 3 T13: 0.0218 T23: -0.0220
REMARK 3 L TENSOR
REMARK 3 L11: 4.8692 L22: 5.8240
REMARK 3 L33: 3.0909 L12: -2.2080
REMARK 3 L13: 0.8564 L23: 0.0547
REMARK 3 S TENSOR
REMARK 3 S11: 0.0204 S12: -0.0985 S13: 0.1226
REMARK 3 S21: 0.1626 S22: 0.0230 S23: 0.0573
REMARK 3 S31: 0.0257 S32: -0.3743 S33: -0.0571
REMARK 3 TLS GROUP : 5
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 130 THROUGH 167 )
REMARK 3 ORIGIN FOR THE GROUP (A): -26.3093 13.3223 1.5718
REMARK 3 T TENSOR
REMARK 3 T11: 0.2475 T22: 0.2446
REMARK 3 T33: 0.1699 T12: -0.1123
REMARK 3 T13: 0.0026 T23: -0.0171
REMARK 3 L TENSOR
REMARK 3 L11: 6.2261 L22: 2.8223
REMARK 3 L33: 3.5194 L12: -2.0035
REMARK 3 L13: 1.3013 L23: -0.7255
REMARK 3 S TENSOR
REMARK 3 S11: 0.0414 S12: -0.3767 S13: -0.1259
REMARK 3 S21: 0.2176 S22: -0.0369 S23: 0.0508
REMARK 3 S31: 0.2444 S32: -0.3522 S33: -0.0330
REMARK 3 TLS GROUP : 6
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 168 THROUGH 214 )
REMARK 3 ORIGIN FOR THE GROUP (A): -22.5157 16.3856 -11.2218
REMARK 3 T TENSOR
REMARK 3 T11: 0.1638 T22: 0.1415
REMARK 3 T33: 0.1648 T12: -0.0476
REMARK 3 T13: -0.0092 T23: -0.0091
REMARK 3 L TENSOR
REMARK 3 L11: 1.9431 L22: 2.4110
REMARK 3 L33: 3.8310 L12: 0.3216
REMARK 3 L13: 0.2392 L23: -0.5699
REMARK 3 S TENSOR
REMARK 3 S11: -0.0063 S12: 0.0549 S13: -0.0308
REMARK 3 S21: -0.1220 S22: 0.0359 S23: 0.0675
REMARK 3 S31: 0.0622 S32: -0.1646 S33: -0.0206
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 5NZ0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-MAY-17.
REMARK 100 THE DEPOSITION ID IS D_1200004940.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 01-FEB-15
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 6.0-7.0
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : DIAMOND
REMARK 200 BEAMLINE : I04-1
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.920
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23173
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.825
REMARK 200 RESOLUTION RANGE LOW (A) : 121.382
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0
REMARK 200 DATA REDUNDANCY : 14.60
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : 0.10800
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.1000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.83
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92
REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0
REMARK 200 DATA REDUNDANCY IN SHELL : 13.30
REMARK 200 R MERGE FOR SHELL (I) : 1.09400
REMARK 200 R SYM FOR SHELL (I) : 1.09400
REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.700
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: 1T56
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 50.06
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 1.7 TO 2.1 AMMONIUM SULFATE 0.1M MES
REMARK 280 (PH 6 TO 7) 5 TO 15%(V/V) GLYCEROL 7 TO 12%(V/V) 1,4-DIOXANE,
REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z+1/2
REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4
REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4
REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4
REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4
REMARK 290 7555 Y,X,-Z
REMARK 290 8555 -Y,-X,-Z+1/2
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 16.89000
REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 60.69100
REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 60.69100
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 8.44500
REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 60.69100
REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 60.69100
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 25.33500
REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 60.69100
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.69100
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 8.44500
REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 60.69100
REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.69100
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 25.33500
REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 16.89000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 3020 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 17170 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000
REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -16.89000
REMARK 375
REMARK 375 SPECIAL POSITION
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL
REMARK 375 POSITIONS.
REMARK 375
REMARK 375 ATOM RES CSSEQI
REMARK 375 HOH A 415 LIES ON A SPECIAL POSITION.
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A -3
REMARK 465 ASP A -2
REMARK 465 ILE A -1
REMARK 465 GLU A 0
REMARK 465 PHE A 1
REMARK 465 THR A 2
REMARK 465 THR A 3
REMARK 465 SER A 4
REMARK 465 ALA A 5
REMARK 465 ALA A 6
REMARK 465 SER A 7
REMARK 465 GLN A 8
REMARK 465 ALA A 9
REMARK 465 SER A 10
REMARK 465 LEU A 11
REMARK 465 PRO A 12
REMARK 465 ARG A 13
REMARK 465 GLY A 14
REMARK 465 ARG A 15
REMARK 465 ARG A 16
REMARK 465 THR A 17
REMARK 465 ALA A 18
REMARK 465 ARG A 19
REMARK 465 PRO A 20
REMARK 465 SER A 21
REMARK 465 ALA A 95
REMARK 465 ASP A 96
REMARK 465 THR A 97
REMARK 465 ASN A 215
REMARK 465 ARG A 216
REMARK 465 GLY A 217
REMARK 465 SER A 218
REMARK 465 HIS A 219
REMARK 465 HIS A 220
REMARK 465 HIS A 221
REMARK 465 HIS A 222
REMARK 465 HIS A 223
REMARK 465 HIS A 224
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 LYS A 52 CG CD CE NZ
REMARK 470 GLU A 214 CG CD OE1 OE2
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O HOH A 450 O HOH A 460 2.19
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 THR A 165 -108.59 -106.19
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue ZLD A 301
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 302
DBREF 5NZ0 A 2 216 UNP P9WMC1 ETHR_MYCTU 2 216
SEQADV 5NZ0 MET A -3 UNP P9WMC1 INITIATING METHIONINE
SEQADV 5NZ0 ASP A -2 UNP P9WMC1 EXPRESSION TAG
SEQADV 5NZ0 ILE A -1 UNP P9WMC1 EXPRESSION TAG
SEQADV 5NZ0 GLU A 0 UNP P9WMC1 EXPRESSION TAG
SEQADV 5NZ0 PHE A 1 UNP P9WMC1 EXPRESSION TAG
SEQADV 5NZ0 GLY A 217 UNP P9WMC1 EXPRESSION TAG
SEQADV 5NZ0 SER A 218 UNP P9WMC1 EXPRESSION TAG
SEQADV 5NZ0 HIS A 219 UNP P9WMC1 EXPRESSION TAG
SEQADV 5NZ0 HIS A 220 UNP P9WMC1 EXPRESSION TAG
SEQADV 5NZ0 HIS A 221 UNP P9WMC1 EXPRESSION TAG
SEQADV 5NZ0 HIS A 222 UNP P9WMC1 EXPRESSION TAG
SEQADV 5NZ0 HIS A 223 UNP P9WMC1 EXPRESSION TAG
SEQADV 5NZ0 HIS A 224 UNP P9WMC1 EXPRESSION TAG
SEQRES 1 A 228 MET ASP ILE GLU PHE THR THR SER ALA ALA SER GLN ALA
SEQRES 2 A 228 SER LEU PRO ARG GLY ARG ARG THR ALA ARG PRO SER GLY
SEQRES 3 A 228 ASP ASP ARG GLU LEU ALA ILE LEU ALA THR ALA GLU ASN
SEQRES 4 A 228 LEU LEU GLU ASP ARG PRO LEU ALA ASP ILE SER VAL ASP
SEQRES 5 A 228 ASP LEU ALA LYS GLY ALA GLY ILE SER ARG PRO THR PHE
SEQRES 6 A 228 TYR PHE TYR PHE PRO SER LYS GLU ALA VAL LEU LEU THR
SEQRES 7 A 228 LEU LEU ASP ARG VAL VAL ASN GLN ALA ASP MET ALA LEU
SEQRES 8 A 228 GLN THR LEU ALA GLU ASN PRO ALA ASP THR ASP ARG GLU
SEQRES 9 A 228 ASN MET TRP ARG THR GLY ILE ASN VAL PHE PHE GLU THR
SEQRES 10 A 228 PHE GLY SER HIS LYS ALA VAL THR ARG ALA GLY GLN ALA
SEQRES 11 A 228 ALA ARG ALA THR SER VAL GLU VAL ALA GLU LEU TRP SER
SEQRES 12 A 228 THR PHE MET GLN LYS TRP ILE ALA TYR THR ALA ALA VAL
SEQRES 13 A 228 ILE ASP ALA GLU ARG ASP ARG GLY ALA ALA PRO ARG THR
SEQRES 14 A 228 LEU PRO ALA HIS GLU LEU ALA THR ALA LEU ASN LEU MET
SEQRES 15 A 228 ASN GLU ARG THR LEU PHE ALA SER PHE ALA GLY GLU GLN
SEQRES 16 A 228 PRO SER VAL PRO GLU ALA ARG VAL LEU ASP THR LEU VAL
SEQRES 17 A 228 HIS ILE TRP VAL THR SER ILE TYR GLY GLU ASN ARG GLY
SEQRES 18 A 228 SER HIS HIS HIS HIS HIS HIS
HET ZLD A 301 24
HET EDO A 302 4
HETNAM ZLD N-{[(5S)-3-(3-FLUORO-4-MORPHOLIN-4-YLPHENYL)-2-OXO-1,3-
HETNAM 2 ZLD OXAZOLIDIN-5-YL]METHYL}ACETAMIDE
HETNAM EDO 1,2-ETHANEDIOL
HETSYN ZLD LINEZOLID
HETSYN EDO ETHYLENE GLYCOL
FORMUL 2 ZLD C16 H20 F N3 O4
FORMUL 3 EDO C2 H6 O2
FORMUL 4 HOH *124(H2 O)
HELIX 1 AA1 GLY A 22 GLU A 38 1 17
HELIX 2 AA2 PRO A 41 ILE A 45 5 5
HELIX 3 AA3 SER A 46 ALA A 54 1 9
HELIX 4 AA4 SER A 57 PHE A 65 1 9
HELIX 5 AA5 SER A 67 GLU A 92 1 26
HELIX 6 AA6 ARG A 99 SER A 116 1 18
HELIX 7 AA7 HIS A 117 ARG A 128 1 12
HELIX 8 AA8 SER A 131 ARG A 159 1 29
HELIX 9 AA9 PRO A 167 GLY A 189 1 23
HELIX 10 AB1 PRO A 195 GLY A 213 1 19
CISPEP 1 GLN A 191 PRO A 192 0 3.44
SITE 1 AC1 11 MET A 102 GLY A 106 ILE A 107 PHE A 110
SITE 2 AC1 11 MET A 142 TRP A 145 TYR A 148 THR A 149
SITE 3 AC1 11 ASN A 176 ASN A 179 TRP A 207
SITE 1 AC2 2 SER A 46 VAL A 47
CRYST1 121.382 121.382 33.780 90.00 90.00 90.00 P 41 21 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.008238 0.000000 0.000000 0.00000
SCALE2 0.000000 0.008238 0.000000 0.00000
SCALE3 0.000000 0.000000 0.029603 0.00000