data_5O0Z # _entry.id 5O0Z # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.395 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5O0Z pdb_00005o0z 10.2210/pdb5o0z/pdb WWPDB D_1200004984 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-11-15 2 'Structure model' 1 1 2017-12-13 3 'Structure model' 1 2 2018-01-03 4 'Structure model' 1 3 2019-10-16 5 'Structure model' 2 0 2024-08-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 5 'Structure model' Advisory 5 5 'Structure model' 'Atomic model' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' 9 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' citation 3 4 'Structure model' reflns_shell 4 5 'Structure model' atom_site 5 5 'Structure model' atom_site_anisotrop 6 5 'Structure model' chem_comp_atom 7 5 'Structure model' chem_comp_bond 8 5 'Structure model' database_2 9 5 'Structure model' pdbx_molecule_features 10 5 'Structure model' pdbx_poly_seq_scheme 11 5 'Structure model' pdbx_struct_conn_angle 12 5 'Structure model' pdbx_unobs_or_zero_occ_atoms 13 5 'Structure model' struct_conn 14 5 'Structure model' struct_ref_seq 15 5 'Structure model' struct_site 16 5 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.title' 2 3 'Structure model' '_citation.journal_volume' 3 3 'Structure model' '_citation.page_first' 4 3 'Structure model' '_citation.page_last' 5 5 'Structure model' '_atom_site.auth_seq_id' 6 5 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 7 5 'Structure model' '_database_2.pdbx_DOI' 8 5 'Structure model' '_database_2.pdbx_database_accession' 9 5 'Structure model' '_pdbx_poly_seq_scheme.pdb_seq_num' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 22 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 23 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 24 5 'Structure model' '_pdbx_struct_conn_angle.value' 25 5 'Structure model' '_pdbx_unobs_or_zero_occ_atoms.auth_seq_id' 26 5 'Structure model' '_struct_conn.conn_type_id' 27 5 'Structure model' '_struct_conn.id' 28 5 'Structure model' '_struct_conn.pdbx_dist_value' 29 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 30 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 31 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 32 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 33 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 34 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 35 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 36 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 37 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 38 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 39 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 40 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 41 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 42 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 43 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 44 5 'Structure model' '_struct_ref_seq.db_align_beg' 45 5 'Structure model' '_struct_ref_seq.db_align_end' 46 5 'Structure model' '_struct_ref_seq.pdbx_auth_seq_align_beg' 47 5 'Structure model' '_struct_ref_seq.pdbx_auth_seq_align_end' 48 5 'Structure model' '_struct_site.pdbx_auth_seq_id' 49 5 'Structure model' '_struct_site_gen.auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5O0Z _pdbx_database_status.recvd_initial_deposition_date 2017-05-17 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Vlieg, H.C.' 1 ? 'Kleijn, L.H.J.' 2 ? 'Martin, N.I.' 3 ? 'Janssen, B.J.C.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country GE _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Angew. Chem. Int. Ed. Engl.' _citation.journal_id_ASTM ACIEAY _citation.journal_id_CSD 0179 _citation.journal_id_ISSN 1521-3773 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 56 _citation.language ? _citation.page_first 16546 _citation.page_last 16549 _citation.title ;A High-Resolution Crystal Structure that Reveals Molecular Details of Target Recognition by the Calcium-Dependent Lipopeptide Antibiotic Laspartomycin C. ; _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/anie.201709240 _citation.pdbx_database_id_PubMed 29108098 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kleijn, L.H.J.' 1 ? primary 'Vlieg, H.C.' 2 ? primary 'Wood, T.M.' 3 ? primary 'Sastre Torano, J.' 4 ? primary 'Janssen, B.J.C.' 5 ? primary 'Martin, N.I.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Laspartomycin C' 1266.420 2 ? ? ? ? 2 non-polymer syn '[(~{E})-3-methylhex-2-enyl] dihydrogen phosphate' 194.165 2 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 4 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 5 non-polymer syn 'ACETIC ACID' 60.052 3 ? ? ? ? 6 water nat water 18.015 17 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(9GE)D(DNP)(CPI)GDGDG(2TL)IP' _entity_poly.pdbx_seq_one_letter_code_can XDAXGDGDGTIP _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '[(~{E})-3-methylhex-2-enyl] dihydrogen phosphate' 9GB 3 'CALCIUM ION' CA 4 'CHLORIDE ION' CL 5 'ACETIC ACID' ACY 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 9GE n 1 2 ASP n 1 3 DNP n 1 4 CPI n 1 5 GLY n 1 6 ASP n 1 7 GLY n 1 8 ASP n 1 9 GLY n 1 10 2TL n 1 11 ILE n 1 12 PRO n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 12 _pdbx_entity_src_syn.organism_scientific 'Streptomyces viridochromogenes' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 1938 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2TL 'D-peptide linking' . D-allothreonine ? 'C4 H9 N O3' 119.119 9GB non-polymer . '[(~{E})-3-methylhex-2-enyl] dihydrogen phosphate' ? 'C7 H15 O4 P' 194.165 9GE non-polymer . '(~{E})-13-methyltetradec-2-enoic acid' ? 'C15 H28 O2' 240.382 ACY non-polymer . 'ACETIC ACID' ? 'C2 H4 O2' 60.052 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CPI 'D-peptide linking' . 6-CARBOXYPIPERIDINE ? 'C6 H11 N O2' 129.157 DNP 'L-peptide linking' n 3-AMINO-ALANINE ? 'C3 H9 N2 O2 1' 105.116 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 9GE 1 1 0 9GE LCT A . n A 1 2 ASP 2 2 1 ASP ASP A . n A 1 3 DNP 3 3 2 DNP ASI A . n A 1 4 CPI 4 4 3 CPI CPE A . n A 1 5 GLY 5 5 4 GLY GLY A . n A 1 6 ASP 6 6 5 ASP ASP A . n A 1 7 GLY 7 7 6 GLY GLY A . n A 1 8 ASP 8 8 7 ASP ASP A . n A 1 9 GLY 9 9 8 GLY GLY A . n A 1 10 2TL 10 10 9 2TL ALV A . n A 1 11 ILE 11 11 10 ILE ILE A . n A 1 12 PRO 12 12 11 PRO PRO A . n B 1 1 9GE 1 1 0 9GE LCT B . n B 1 2 ASP 2 2 1 ASP ASP B . n B 1 3 DNP 3 3 2 DNP ASI B . n B 1 4 CPI 4 4 3 CPI CPE B . n B 1 5 GLY 5 5 4 GLY GLY B . n B 1 6 ASP 6 6 5 ASP ASP B . n B 1 7 GLY 7 7 6 GLY GLY B . n B 1 8 ASP 8 8 7 ASP ASP B . n B 1 9 GLY 9 9 8 GLY GLY B . n B 1 10 2TL 10 10 9 2TL ALV B . n B 1 11 ILE 11 11 10 ILE ILE B . n B 1 12 PRO 12 12 11 PRO PRO B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 9GB 1 101 1 9GB GPQ A . D 3 CA 1 102 1 CA CA A . E 3 CA 1 103 2 CA CA A . F 4 CL 1 104 1 CL CL A . G 5 ACY 1 105 2 ACY ACY A . H 5 ACY 1 106 3 ACY ACY A . I 2 9GB 1 101 2 9GB GPQ B . J 3 CA 1 102 3 CA CA B . K 3 CA 1 103 4 CA CA B . L 5 ACY 1 104 1 ACY ACY B . M 6 HOH 1 201 6 HOH HOH A . M 6 HOH 2 202 4 HOH HOH A . M 6 HOH 3 203 8 HOH HOH A . M 6 HOH 4 204 9 HOH HOH A . M 6 HOH 5 205 3 HOH HOH A . M 6 HOH 6 206 10 HOH HOH A . M 6 HOH 7 207 7 HOH HOH A . M 6 HOH 8 208 5 HOH HOH A . M 6 HOH 9 209 15 HOH HOH A . N 6 HOH 1 201 16 HOH HOH B . N 6 HOH 2 202 11 HOH HOH B . N 6 HOH 3 203 13 HOH HOH B . N 6 HOH 4 204 12 HOH HOH B . N 6 HOH 5 205 1 HOH HOH B . N 6 HOH 6 206 2 HOH HOH B . N 6 HOH 7 207 17 HOH HOH B . N 6 HOH 8 208 14 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A 9GE 1 ? C1 ? A 9GE 1 C1 2 1 Y 1 A 9GE 1 ? C2 ? A 9GE 1 C2 3 1 Y 1 A 9GE 1 ? C3 ? A 9GE 1 C3 4 1 Y 1 A 9GE 1 ? C4 ? A 9GE 1 C4 5 1 Y 1 A 9GE 1 ? C5 ? A 9GE 1 C5 6 1 Y 1 A 9GE 1 ? C6 ? A 9GE 1 C6 7 1 Y 1 A 9GE 1 ? C7 ? A 9GE 1 C7 8 1 Y 1 A 9GE 1 ? C8 ? A 9GE 1 C8 9 1 Y 1 A 9GE 1 ? C9 ? A 9GE 1 C9 10 1 Y 1 A 9GE 1 ? C10 ? A 9GE 1 C10 11 1 Y 1 B 9GE 1 ? C1 ? B 9GE 1 C1 12 1 Y 1 B 9GE 1 ? C2 ? B 9GE 1 C2 13 1 Y 1 B 9GE 1 ? C3 ? B 9GE 1 C3 14 1 Y 1 B 9GE 1 ? C4 ? B 9GE 1 C4 15 1 Y 1 B 9GE 1 ? C5 ? B 9GE 1 C5 16 1 Y 1 B 9GE 1 ? C6 ? B 9GE 1 C6 17 1 Y 1 B 9GE 1 ? C7 ? B 9GE 1 C7 18 1 Y 1 B 9GE 1 ? C8 ? B 9GE 1 C8 19 1 Y 1 B 9GE 1 ? C9 ? B 9GE 1 C9 20 1 Y 1 B 9GE 1 ? C10 ? B 9GE 1 C10 21 1 N 1 A 9GB 101 ? C7 ? C 9GB 1 C7 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0158 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? iMOSFLM ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXCD ? ? ? . 5 # _cell.entry_id 5O0Z _cell.length_a 56.933 _cell.length_b 56.933 _cell.length_c 56.933 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5O0Z _symmetry.space_group_name_H-M 'P 43 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 212 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5O0Z _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.05 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 59.62 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '20 mM CaCl2 and 37.5% v/v MPD' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 2M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-02-17 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.873 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE ID23-2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.873 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ID23-2 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5O0Z _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.28 _reflns.d_resolution_low 28.47 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 8650 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 9.4 _reflns.pdbx_Rmerge_I_obs 0.067 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 15 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.032 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.994 _reflns.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5O0Z _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 8170 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.26 _refine.ls_d_res_high 1.28 _refine.ls_percent_reflns_obs 99.97 _refine.ls_R_factor_obs 0.14605 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.14503 _refine.ls_R_factor_R_free 0.16506 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 435 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.976 _refine.correlation_coeff_Fo_to_Fc_free 0.980 _refine.B_iso_mean 20.443 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SIRAS _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.035 _refine.pdbx_overall_ESU_R_Free 0.035 _refine.overall_SU_ML 0.025 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 1.383 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 156 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 40 _refine_hist.number_atoms_solvent 17 _refine_hist.number_atoms_total 213 _refine_hist.d_res_high 1.28 _refine_hist.d_res_low 40.26 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.019 0.020 ? 188 'X-RAY DIFFRACTION' ? r_bond_other_d 0.005 0.020 ? 161 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.862 2.258 ? 246 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.850 2.982 ? 373 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.499 5.000 ? 22 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 28.217 30.000 ? 6 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.178 15.000 ? 12 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 2.078 0.200 ? 20 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.009 0.021 ? 202 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.003 0.020 ? 22 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.190 1.818 ? 95 'X-RAY DIFFRACTION' ? r_mcbond_other 1.768 1.686 ? 91 'X-RAY DIFFRACTION' ? r_mcangle_it 2.312 2.555 ? 112 'X-RAY DIFFRACTION' ? r_mcangle_other 2.303 2.554 ? 113 'X-RAY DIFFRACTION' ? r_scbond_it 4.626 2.316 ? 93 'X-RAY DIFFRACTION' ? r_scbond_other 4.602 2.340 ? 94 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other 5.155 3.329 ? 135 'X-RAY DIFFRACTION' ? r_long_range_B_refined 3.442 25.513 ? 241 'X-RAY DIFFRACTION' ? r_long_range_B_other 3.400 25.543 ? 241 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 2.788 3.000 ? 341 'X-RAY DIFFRACTION' ? r_sphericity_free 33.601 5.000 ? 8 'X-RAY DIFFRACTION' ? r_sphericity_bonded 13.599 5.000 ? 360 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.280 _refine_ls_shell.d_res_low 1.314 _refine_ls_shell.number_reflns_R_work 580 _refine_ls_shell.R_factor_R_work 0.331 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.312 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 33 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 5O0Z _struct.title 'Structure of laspartomycin C in complex with geranyl-phosphate' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5O0Z _struct_keywords.text 'antibiotic complex, antibiotic' _struct_keywords.pdbx_keywords ANTIBIOTIC # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 5 ? H N N 5 ? I N N 2 ? J N N 3 ? K N N 3 ? L N N 5 ? M N N 6 ? N N N 6 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5O0Z _struct_ref.pdbx_db_accession 5O0Z _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5O0Z A 1 ? 12 ? 5O0Z 1 ? 12 ? 1 12 2 1 5O0Z B 1 ? 12 ? 5O0Z 1 ? 12 ? 1 12 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2920 ? 1 MORE -69 ? 1 'SSA (A^2)' 3910 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'mass spectrometry' _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 19_666 -x+5/4,-z+5/4,-y+5/4 -1.0000000000 0.0000000000 0.0000000000 71.1662500000 0.0000000000 0.0000000000 -1.0000000000 71.1662500000 0.0000000000 -1.0000000000 0.0000000000 71.1662500000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A 9GE 1 C ? ? ? 1_555 A ASP 2 N ? ? A 9GE 1 A ASP 2 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale2 covale both ? A ASP 2 C ? ? ? 1_555 A DNP 3 N ? ? A ASP 2 A DNP 3 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale3 covale both ? A DNP 3 C ? ? ? 1_555 A CPI 4 N ? ? A DNP 3 A CPI 4 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale4 covale one ? A DNP 3 NG ? ? ? 1_555 A PRO 12 C ? ? A DNP 3 A PRO 12 1_555 ? ? ? ? ? ? ? 1.444 ? ? covale5 covale both ? A CPI 4 C ? ? ? 1_555 A GLY 5 N ? ? A CPI 4 A GLY 5 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale6 covale both ? A GLY 9 C ? ? ? 1_555 A 2TL 10 N ? ? A GLY 9 A 2TL 10 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale7 covale both ? A 2TL 10 C ? ? ? 1_555 A ILE 11 N ? ? A 2TL 10 A ILE 11 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale8 covale both ? B 9GE 1 C ? ? ? 1_555 B ASP 2 N ? ? B 9GE 1 B ASP 2 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale9 covale both ? B ASP 2 C ? ? ? 1_555 B DNP 3 N ? ? B ASP 2 B DNP 3 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale10 covale both ? B DNP 3 C ? ? ? 1_555 B CPI 4 N ? ? B DNP 3 B CPI 4 1_555 ? ? ? ? ? ? ? 1.349 ? ? covale11 covale one ? B DNP 3 NG ? ? ? 1_555 B PRO 12 C ? ? B DNP 3 B PRO 12 1_555 ? ? ? ? ? ? ? 1.467 ? ? covale12 covale both ? B CPI 4 C ? ? ? 1_555 B GLY 5 N ? ? B CPI 4 B GLY 5 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale13 covale both ? B GLY 9 C ? ? ? 1_555 B 2TL 10 N ? ? B GLY 9 B 2TL 10 1_555 ? ? ? ? ? ? ? 1.345 ? ? covale14 covale both ? B 2TL 10 C ? ? ? 1_555 B ILE 11 N ? ? B 2TL 10 B ILE 11 1_555 ? ? ? ? ? ? ? 1.325 ? ? metalc1 metalc ? ? A 9GE 1 O ? ? ? 1_555 E CA . CA ? ? A 9GE 1 A CA 103 1_555 ? ? ? ? ? ? ? 2.352 ? ? metalc2 metalc ? ? A ASP 2 OD1 ? ? ? 1_555 E CA . CA ? ? A ASP 2 A CA 103 1_555 ? ? ? ? ? ? ? 2.318 ? ? metalc3 metalc ? ? A DNP 3 O ? ? ? 1_555 D CA . CA ? ? A DNP 3 A CA 102 1_555 ? ? ? ? ? ? ? 2.309 ? ? metalc4 metalc ? ? A ASP 6 OD1 ? ? ? 1_555 D CA . CA ? ? A ASP 6 A CA 102 1_555 ? ? ? ? ? ? ? 2.318 ? ? metalc5 metalc ? ? A GLY 7 O ? ? ? 1_555 D CA . CA ? ? A GLY 7 A CA 102 1_555 ? ? ? ? ? ? ? 2.332 ? ? metalc6 metalc ? ? A ASP 8 OD1 ? ? ? 1_555 E CA . CA ? ? A ASP 8 A CA 103 1_555 ? ? ? ? ? ? ? 2.300 ? ? metalc7 metalc ? ? A GLY 9 O ? ? ? 1_555 D CA . CA ? ? A GLY 9 A CA 102 1_555 ? ? ? ? ? ? ? 2.272 ? ? metalc8 metalc ? ? A ILE 11 O ? ? ? 1_555 D CA . CA ? ? A ILE 11 A CA 102 1_555 ? ? ? ? ? ? ? 2.320 ? ? metalc9 metalc ? ? C 9GB . O1A ? ? ? 1_555 D CA . CA ? ? A 9GB 101 A CA 102 1_555 ? ? ? ? ? ? ? 2.280 ? ? metalc10 metalc ? ? C 9GB . O2A ? ? ? 1_555 E CA . CA ? ? A 9GB 101 A CA 103 1_555 ? ? ? ? ? ? ? 2.241 ? ? metalc11 metalc ? ? E CA . CA ? ? ? 1_555 N HOH . O ? ? A CA 103 B HOH 205 1_555 ? ? ? ? ? ? ? 2.375 ? ? metalc12 metalc ? ? E CA . CA ? ? ? 1_555 N HOH . O ? ? A CA 103 B HOH 206 1_555 ? ? ? ? ? ? ? 2.382 ? ? metalc13 metalc ? ? M HOH . O ? ? ? 1_555 K CA . CA ? ? A HOH 204 B CA 103 1_555 ? ? ? ? ? ? ? 2.365 ? ? metalc14 metalc ? ? M HOH . O ? ? ? 1_555 K CA . CA ? ? A HOH 206 B CA 103 1_555 ? ? ? ? ? ? ? 2.333 ? ? metalc15 metalc ? ? B 9GE 1 O ? ? ? 1_555 K CA . CA ? ? B 9GE 1 B CA 103 1_555 ? ? ? ? ? ? ? 2.394 ? ? metalc16 metalc ? ? B ASP 2 OD1 ? ? ? 1_555 K CA . CA ? ? B ASP 2 B CA 103 1_555 ? ? ? ? ? ? ? 2.332 ? ? metalc17 metalc ? ? B DNP 3 O ? ? ? 1_555 J CA . CA ? ? B DNP 3 B CA 102 1_555 ? ? ? ? ? ? ? 2.282 ? ? metalc18 metalc ? ? B ASP 6 OD1 ? ? ? 1_555 J CA . CA ? ? B ASP 6 B CA 102 1_555 ? ? ? ? ? ? ? 2.307 ? ? metalc19 metalc ? ? B GLY 7 O ? ? ? 1_555 J CA . CA ? ? B GLY 7 B CA 102 1_555 ? ? ? ? ? ? ? 2.373 ? ? metalc20 metalc ? ? B ASP 8 OD1 ? ? ? 1_555 K CA . CA ? ? B ASP 8 B CA 103 1_555 ? ? ? ? ? ? ? 2.283 ? ? metalc21 metalc ? ? B GLY 9 O ? ? ? 1_555 J CA . CA ? ? B GLY 9 B CA 102 1_555 ? ? ? ? ? ? ? 2.277 ? ? metalc22 metalc ? ? B ILE 11 O ? ? ? 1_555 J CA . CA ? ? B ILE 11 B CA 102 1_555 ? ? ? ? ? ? ? 2.314 ? ? metalc23 metalc ? ? I 9GB . O3A ? ? ? 1_555 J CA . CA ? ? B 9GB 101 B CA 102 1_555 ? ? ? ? ? ? ? 2.265 ? ? metalc24 metalc ? ? I 9GB . O2A ? ? ? 1_555 K CA . CA ? ? B 9GB 101 B CA 103 1_555 ? ? ? ? ? ? ? 2.264 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A 9GE 1 ? A 9GE 1 ? 1_555 CA ? E CA . ? A CA 103 ? 1_555 OD1 ? A ASP 2 ? A ASP 2 ? 1_555 82.4 ? 2 O ? A 9GE 1 ? A 9GE 1 ? 1_555 CA ? E CA . ? A CA 103 ? 1_555 OD1 ? A ASP 8 ? A ASP 8 ? 1_555 175.4 ? 3 OD1 ? A ASP 2 ? A ASP 2 ? 1_555 CA ? E CA . ? A CA 103 ? 1_555 OD1 ? A ASP 8 ? A ASP 8 ? 1_555 93.2 ? 4 O ? A 9GE 1 ? A 9GE 1 ? 1_555 CA ? E CA . ? A CA 103 ? 1_555 O2A ? C 9GB . ? A 9GB 101 ? 1_555 93.0 ? 5 OD1 ? A ASP 2 ? A ASP 2 ? 1_555 CA ? E CA . ? A CA 103 ? 1_555 O2A ? C 9GB . ? A 9GB 101 ? 1_555 92.6 ? 6 OD1 ? A ASP 8 ? A ASP 8 ? 1_555 CA ? E CA . ? A CA 103 ? 1_555 O2A ? C 9GB . ? A 9GB 101 ? 1_555 88.4 ? 7 O ? A 9GE 1 ? A 9GE 1 ? 1_555 CA ? E CA . ? A CA 103 ? 1_555 O ? N HOH . ? B HOH 205 ? 1_555 96.1 ? 8 OD1 ? A ASP 2 ? A ASP 2 ? 1_555 CA ? E CA . ? A CA 103 ? 1_555 O ? N HOH . ? B HOH 205 ? 1_555 176.5 ? 9 OD1 ? A ASP 8 ? A ASP 8 ? 1_555 CA ? E CA . ? A CA 103 ? 1_555 O ? N HOH . ? B HOH 205 ? 1_555 88.4 ? 10 O2A ? C 9GB . ? A 9GB 101 ? 1_555 CA ? E CA . ? A CA 103 ? 1_555 O ? N HOH . ? B HOH 205 ? 1_555 84.3 ? 11 O ? A 9GE 1 ? A 9GE 1 ? 1_555 CA ? E CA . ? A CA 103 ? 1_555 O ? N HOH . ? B HOH 206 ? 1_555 91.8 ? 12 OD1 ? A ASP 2 ? A ASP 2 ? 1_555 CA ? E CA . ? A CA 103 ? 1_555 O ? N HOH . ? B HOH 206 ? 1_555 100.1 ? 13 OD1 ? A ASP 8 ? A ASP 8 ? 1_555 CA ? E CA . ? A CA 103 ? 1_555 O ? N HOH . ? B HOH 206 ? 1_555 87.7 ? 14 O2A ? C 9GB . ? A 9GB 101 ? 1_555 CA ? E CA . ? A CA 103 ? 1_555 O ? N HOH . ? B HOH 206 ? 1_555 166.9 ? 15 O ? N HOH . ? B HOH 205 ? 1_555 CA ? E CA . ? A CA 103 ? 1_555 O ? N HOH . ? B HOH 206 ? 1_555 83.1 ? 16 O ? A DNP 3 ? A DNP 3 ? 1_555 CA ? D CA . ? A CA 102 ? 1_555 OD1 ? A ASP 6 ? A ASP 6 ? 1_555 85.8 ? 17 O ? A DNP 3 ? A DNP 3 ? 1_555 CA ? D CA . ? A CA 102 ? 1_555 O ? A GLY 7 ? A GLY 7 ? 1_555 99.4 ? 18 OD1 ? A ASP 6 ? A ASP 6 ? 1_555 CA ? D CA . ? A CA 102 ? 1_555 O ? A GLY 7 ? A GLY 7 ? 1_555 90.0 ? 19 O ? A DNP 3 ? A DNP 3 ? 1_555 CA ? D CA . ? A CA 102 ? 1_555 O ? A GLY 9 ? A GLY 9 ? 1_555 168.6 ? 20 OD1 ? A ASP 6 ? A ASP 6 ? 1_555 CA ? D CA . ? A CA 102 ? 1_555 O ? A GLY 9 ? A GLY 9 ? 1_555 95.7 ? 21 O ? A GLY 7 ? A GLY 7 ? 1_555 CA ? D CA . ? A CA 102 ? 1_555 O ? A GLY 9 ? A GLY 9 ? 1_555 91.9 ? 22 O ? A DNP 3 ? A DNP 3 ? 1_555 CA ? D CA . ? A CA 102 ? 1_555 O ? A ILE 11 ? A ILE 11 ? 1_555 78.4 ? 23 OD1 ? A ASP 6 ? A ASP 6 ? 1_555 CA ? D CA . ? A CA 102 ? 1_555 O ? A ILE 11 ? A ILE 11 ? 1_555 91.9 ? 24 O ? A GLY 7 ? A GLY 7 ? 1_555 CA ? D CA . ? A CA 102 ? 1_555 O ? A ILE 11 ? A ILE 11 ? 1_555 177.0 ? 25 O ? A GLY 9 ? A GLY 9 ? 1_555 CA ? D CA . ? A CA 102 ? 1_555 O ? A ILE 11 ? A ILE 11 ? 1_555 90.3 ? 26 O ? A DNP 3 ? A DNP 3 ? 1_555 CA ? D CA . ? A CA 102 ? 1_555 O1A ? C 9GB . ? A 9GB 101 ? 1_555 85.6 ? 27 OD1 ? A ASP 6 ? A ASP 6 ? 1_555 CA ? D CA . ? A CA 102 ? 1_555 O1A ? C 9GB . ? A 9GB 101 ? 1_555 171.4 ? 28 O ? A GLY 7 ? A GLY 7 ? 1_555 CA ? D CA . ? A CA 102 ? 1_555 O1A ? C 9GB . ? A 9GB 101 ? 1_555 90.7 ? 29 O ? A GLY 9 ? A GLY 9 ? 1_555 CA ? D CA . ? A CA 102 ? 1_555 O1A ? C 9GB . ? A 9GB 101 ? 1_555 92.9 ? 30 O ? A ILE 11 ? A ILE 11 ? 1_555 CA ? D CA . ? A CA 102 ? 1_555 O1A ? C 9GB . ? A 9GB 101 ? 1_555 87.0 ? 31 O ? M HOH . ? A HOH 204 ? 1_555 CA ? K CA . ? B CA 103 ? 1_555 O ? M HOH . ? A HOH 206 ? 1_555 83.4 ? 32 O ? M HOH . ? A HOH 204 ? 1_555 CA ? K CA . ? B CA 103 ? 1_555 O ? B 9GE 1 ? B 9GE 1 ? 1_555 95.8 ? 33 O ? M HOH . ? A HOH 206 ? 1_555 CA ? K CA . ? B CA 103 ? 1_555 O ? B 9GE 1 ? B 9GE 1 ? 1_555 92.2 ? 34 O ? M HOH . ? A HOH 204 ? 1_555 CA ? K CA . ? B CA 103 ? 1_555 OD1 ? B ASP 2 ? B ASP 2 ? 1_555 175.9 ? 35 O ? M HOH . ? A HOH 206 ? 1_555 CA ? K CA . ? B CA 103 ? 1_555 OD1 ? B ASP 2 ? B ASP 2 ? 1_555 99.8 ? 36 O ? B 9GE 1 ? B 9GE 1 ? 1_555 CA ? K CA . ? B CA 103 ? 1_555 OD1 ? B ASP 2 ? B ASP 2 ? 1_555 81.7 ? 37 O ? M HOH . ? A HOH 204 ? 1_555 CA ? K CA . ? B CA 103 ? 1_555 OD1 ? B ASP 8 ? B ASP 8 ? 1_555 88.4 ? 38 O ? M HOH . ? A HOH 206 ? 1_555 CA ? K CA . ? B CA 103 ? 1_555 OD1 ? B ASP 8 ? B ASP 8 ? 1_555 88.2 ? 39 O ? B 9GE 1 ? B 9GE 1 ? 1_555 CA ? K CA . ? B CA 103 ? 1_555 OD1 ? B ASP 8 ? B ASP 8 ? 1_555 175.8 ? 40 OD1 ? B ASP 2 ? B ASP 2 ? 1_555 CA ? K CA . ? B CA 103 ? 1_555 OD1 ? B ASP 8 ? B ASP 8 ? 1_555 94.1 ? 41 O ? M HOH . ? A HOH 204 ? 1_555 CA ? K CA . ? B CA 103 ? 1_555 O2A ? I 9GB . ? B 9GB 101 ? 1_555 85.1 ? 42 O ? M HOH . ? A HOH 206 ? 1_555 CA ? K CA . ? B CA 103 ? 1_555 O2A ? I 9GB . ? B 9GB 101 ? 1_555 167.8 ? 43 O ? B 9GE 1 ? B 9GE 1 ? 1_555 CA ? K CA . ? B CA 103 ? 1_555 O2A ? I 9GB . ? B 9GB 101 ? 1_555 92.9 ? 44 OD1 ? B ASP 2 ? B ASP 2 ? 1_555 CA ? K CA . ? B CA 103 ? 1_555 O2A ? I 9GB . ? B 9GB 101 ? 1_555 91.8 ? 45 OD1 ? B ASP 8 ? B ASP 8 ? 1_555 CA ? K CA . ? B CA 103 ? 1_555 O2A ? I 9GB . ? B 9GB 101 ? 1_555 87.5 ? 46 O ? B DNP 3 ? B DNP 3 ? 1_555 CA ? J CA . ? B CA 102 ? 1_555 OD1 ? B ASP 6 ? B ASP 6 ? 1_555 86.3 ? 47 O ? B DNP 3 ? B DNP 3 ? 1_555 CA ? J CA . ? B CA 102 ? 1_555 O ? B GLY 7 ? B GLY 7 ? 1_555 99.8 ? 48 OD1 ? B ASP 6 ? B ASP 6 ? 1_555 CA ? J CA . ? B CA 102 ? 1_555 O ? B GLY 7 ? B GLY 7 ? 1_555 90.0 ? 49 O ? B DNP 3 ? B DNP 3 ? 1_555 CA ? J CA . ? B CA 102 ? 1_555 O ? B GLY 9 ? B GLY 9 ? 1_555 170.0 ? 50 OD1 ? B ASP 6 ? B ASP 6 ? 1_555 CA ? J CA . ? B CA 102 ? 1_555 O ? B GLY 9 ? B GLY 9 ? 1_555 97.3 ? 51 O ? B GLY 7 ? B GLY 7 ? 1_555 CA ? J CA . ? B CA 102 ? 1_555 O ? B GLY 9 ? B GLY 9 ? 1_555 89.5 ? 52 O ? B DNP 3 ? B DNP 3 ? 1_555 CA ? J CA . ? B CA 102 ? 1_555 O ? B ILE 11 ? B ILE 11 ? 1_555 80.6 ? 53 OD1 ? B ASP 6 ? B ASP 6 ? 1_555 CA ? J CA . ? B CA 102 ? 1_555 O ? B ILE 11 ? B ILE 11 ? 1_555 91.6 ? 54 O ? B GLY 7 ? B GLY 7 ? 1_555 CA ? J CA . ? B CA 102 ? 1_555 O ? B ILE 11 ? B ILE 11 ? 1_555 178.3 ? 55 O ? B GLY 9 ? B GLY 9 ? 1_555 CA ? J CA . ? B CA 102 ? 1_555 O ? B ILE 11 ? B ILE 11 ? 1_555 89.9 ? 56 O ? B DNP 3 ? B DNP 3 ? 1_555 CA ? J CA . ? B CA 102 ? 1_555 O3A ? I 9GB . ? B 9GB 101 ? 1_555 86.1 ? 57 OD1 ? B ASP 6 ? B ASP 6 ? 1_555 CA ? J CA . ? B CA 102 ? 1_555 O3A ? I 9GB . ? B 9GB 101 ? 1_555 172.1 ? 58 O ? B GLY 7 ? B GLY 7 ? 1_555 CA ? J CA . ? B CA 102 ? 1_555 O3A ? I 9GB . ? B 9GB 101 ? 1_555 89.3 ? 59 O ? B GLY 9 ? B GLY 9 ? 1_555 CA ? J CA . ? B CA 102 ? 1_555 O3A ? I 9GB . ? B 9GB 101 ? 1_555 90.6 ? 60 O ? B ILE 11 ? B ILE 11 ? 1_555 CA ? J CA . ? B CA 102 ? 1_555 O3A ? I 9GB . ? B 9GB 101 ? 1_555 89.1 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 9GB 101 ? 12 'binding site for residue 9GB A 101' AC2 Software A CA 102 ? 6 'binding site for residue CA A 102' AC3 Software A CA 103 ? 7 'binding site for residue CA A 103' AC4 Software A CL 104 ? 3 'binding site for residue CL A 104' AC5 Software A ACY 106 ? 3 'binding site for residue ACY A 106' AC6 Software B 9GB 101 ? 11 'binding site for residue 9GB B 101' AC7 Software B CA 102 ? 6 'binding site for residue CA B 102' AC8 Software B CA 103 ? 6 'binding site for residue CA B 103' AC9 Software B ACY 104 ? 2 'binding site for residue ACY B 104' AD1 Software A DNP 3 ? 10 'binding site for residues DNP A 2 and CPI A 3' AD2 Software B 9GE 1 ? 8 'binding site for Di-peptide 9GE B 0 and ASP B 1' AD3 Software B ASP 2 ? 16 'binding site for Di-peptide ASP B 1 and DNP B 2' AD4 Software B DNP 3 ? 10 'binding site for residues DNP B 2 and CPI B 3' AD5 Software B DNP 3 ? 10 'binding site for Di-peptide DNP B 2 and PRO B 11' AD6 Software B CPI 4 ? 7 'binding site for Di-peptide CPI B 3 and GLY B 4' AD7 Software B GLY 9 ? 13 'binding site for Di-peptide GLY B 8 and 2TL B 9' AD8 Software B 2TL 10 ? 12 'binding site for Di-peptide 2TL B 9 and ILE B 10' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 9GE A 1 ? 9GE A 1 . ? 1_555 ? 2 AC1 12 ASP A 2 ? ASP A 2 . ? 1_555 ? 3 AC1 12 DNP A 3 ? DNP A 3 . ? 1_555 ? 4 AC1 12 GLY A 7 ? GLY A 7 . ? 1_555 ? 5 AC1 12 ASP A 8 ? ASP A 8 . ? 1_555 ? 6 AC1 12 GLY A 9 ? GLY A 9 . ? 1_555 ? 7 AC1 12 ILE A 11 ? ILE A 11 . ? 1_555 ? 8 AC1 12 CA D . ? CA A 102 . ? 1_555 ? 9 AC1 12 CA E . ? CA A 103 . ? 1_555 ? 10 AC1 12 HOH M . ? HOH A 204 . ? 1_555 ? 11 AC1 12 9GB I . ? 9GB B 101 . ? 1_555 ? 12 AC1 12 HOH N . ? HOH B 205 . ? 1_555 ? 13 AC2 6 DNP A 3 ? DNP A 3 . ? 1_555 ? 14 AC2 6 ASP A 6 ? ASP A 6 . ? 1_555 ? 15 AC2 6 GLY A 7 ? GLY A 7 . ? 1_555 ? 16 AC2 6 GLY A 9 ? GLY A 9 . ? 1_555 ? 17 AC2 6 ILE A 11 ? ILE A 11 . ? 1_555 ? 18 AC2 6 9GB C . ? 9GB A 101 . ? 1_555 ? 19 AC3 7 9GE A 1 ? 9GE A 1 . ? 1_555 ? 20 AC3 7 ASP A 2 ? ASP A 2 . ? 1_555 ? 21 AC3 7 ASP A 8 ? ASP A 8 . ? 1_555 ? 22 AC3 7 9GB C . ? 9GB A 101 . ? 1_555 ? 23 AC3 7 ACY H . ? ACY A 106 . ? 1_555 ? 24 AC3 7 HOH N . ? HOH B 205 . ? 1_555 ? 25 AC3 7 HOH N . ? HOH B 206 . ? 1_555 ? 26 AC4 3 GLY A 5 ? GLY A 5 . ? 1_555 ? 27 AC4 3 GLY A 7 ? GLY A 7 . ? 1_555 ? 28 AC4 3 GLY B 7 ? GLY B 7 . ? 21_545 ? 29 AC5 3 ASP A 2 ? ASP A 2 . ? 1_555 ? 30 AC5 3 CA E . ? CA A 103 . ? 1_555 ? 31 AC5 3 HOH N . ? HOH B 206 . ? 1_555 ? 32 AC6 11 9GB C . ? 9GB A 101 . ? 1_555 ? 33 AC6 11 9GE B 1 ? 9GE B 1 . ? 1_555 ? 34 AC6 11 ASP B 2 ? ASP B 2 . ? 1_555 ? 35 AC6 11 DNP B 3 ? DNP B 3 . ? 1_555 ? 36 AC6 11 GLY B 7 ? GLY B 7 . ? 1_555 ? 37 AC6 11 ASP B 8 ? ASP B 8 . ? 1_555 ? 38 AC6 11 GLY B 9 ? GLY B 9 . ? 1_555 ? 39 AC6 11 ILE B 11 ? ILE B 11 . ? 1_555 ? 40 AC6 11 CA J . ? CA B 102 . ? 1_555 ? 41 AC6 11 CA K . ? CA B 103 . ? 1_555 ? 42 AC6 11 HOH N . ? HOH B 205 . ? 1_555 ? 43 AC7 6 DNP B 3 ? DNP B 3 . ? 1_555 ? 44 AC7 6 ASP B 6 ? ASP B 6 . ? 1_555 ? 45 AC7 6 GLY B 7 ? GLY B 7 . ? 1_555 ? 46 AC7 6 GLY B 9 ? GLY B 9 . ? 1_555 ? 47 AC7 6 ILE B 11 ? ILE B 11 . ? 1_555 ? 48 AC7 6 9GB I . ? 9GB B 101 . ? 1_555 ? 49 AC8 6 HOH M . ? HOH A 204 . ? 1_555 ? 50 AC8 6 HOH M . ? HOH A 206 . ? 1_555 ? 51 AC8 6 9GE B 1 ? 9GE B 1 . ? 1_555 ? 52 AC8 6 ASP B 2 ? ASP B 2 . ? 1_555 ? 53 AC8 6 ASP B 8 ? ASP B 8 . ? 1_555 ? 54 AC8 6 9GB I . ? 9GB B 101 . ? 1_555 ? 55 AC9 2 CPI A 4 ? CPI A 4 . ? 23_554 ? 56 AC9 2 ASP B 2 ? ASP B 2 . ? 1_555 ? 57 AD1 10 ASP A 2 ? ASP A 2 . ? 1_555 ? 58 AD1 10 GLY A 5 ? GLY A 5 . ? 1_555 ? 59 AD1 10 ASP A 6 ? ASP A 6 . ? 1_555 ? 60 AD1 10 GLY A 7 ? GLY A 7 . ? 1_555 ? 61 AD1 10 ILE A 11 ? ILE A 11 . ? 1_555 ? 62 AD1 10 PRO A 12 ? PRO A 12 . ? 1_555 ? 63 AD1 10 9GB C . ? 9GB A 101 . ? 1_555 ? 64 AD1 10 CA D . ? CA A 102 . ? 1_555 ? 65 AD1 10 HOH M . ? HOH A 205 . ? 1_555 ? 66 AD1 10 ACY L . ? ACY B 104 . ? 21_545 ? 67 AD2 8 9GE A 1 ? 9GE A 1 . ? 23_554 ? 68 AD2 8 ASP A 2 ? ASP A 2 . ? 23_554 ? 69 AD2 8 HOH M . ? HOH A 205 . ? 23_554 ? 70 AD2 8 DNP B 3 ? DNP B 3 . ? 1_555 ? 71 AD2 8 ASP B 8 ? ASP B 8 . ? 1_555 ? 72 AD2 8 9GB I . ? 9GB B 101 . ? 1_555 ? 73 AD2 8 CA K . ? CA B 103 . ? 1_555 ? 74 AD2 8 ACY L . ? ACY B 104 . ? 1_555 ? 75 AD3 16 9GE A 1 ? 9GE A 1 . ? 23_554 ? 76 AD3 16 ASP A 2 ? ASP A 2 . ? 23_554 ? 77 AD3 16 HOH M . ? HOH A 202 . ? 23_554 ? 78 AD3 16 HOH M . ? HOH A 205 . ? 23_554 ? 79 AD3 16 9GE B 1 ? 9GE B 1 . ? 1_555 ? 80 AD3 16 CPI B 4 ? CPI B 4 . ? 1_555 ? 81 AD3 16 GLY B 5 ? GLY B 5 . ? 1_555 ? 82 AD3 16 ASP B 6 ? ASP B 6 . ? 1_555 ? 83 AD3 16 GLY B 7 ? GLY B 7 . ? 1_555 ? 84 AD3 16 ASP B 8 ? ASP B 8 . ? 1_555 ? 85 AD3 16 ILE B 11 ? ILE B 11 . ? 1_555 ? 86 AD3 16 PRO B 12 ? PRO B 12 . ? 1_555 ? 87 AD3 16 9GB I . ? 9GB B 101 . ? 1_555 ? 88 AD3 16 CA J . ? CA B 102 . ? 1_555 ? 89 AD3 16 CA K . ? CA B 103 . ? 1_555 ? 90 AD3 16 ACY L . ? ACY B 104 . ? 1_555 ? 91 AD4 10 HOH M . ? HOH A 202 . ? 23_554 ? 92 AD4 10 ASP B 2 ? ASP B 2 . ? 1_555 ? 93 AD4 10 GLY B 5 ? GLY B 5 . ? 1_555 ? 94 AD4 10 ASP B 6 ? ASP B 6 . ? 1_555 ? 95 AD4 10 GLY B 7 ? GLY B 7 . ? 1_555 ? 96 AD4 10 ILE B 11 ? ILE B 11 . ? 1_555 ? 97 AD4 10 PRO B 12 ? PRO B 12 . ? 1_555 ? 98 AD4 10 9GB I . ? 9GB B 101 . ? 1_555 ? 99 AD4 10 CA J . ? CA B 102 . ? 1_555 ? 100 AD4 10 HOH N . ? HOH B 202 . ? 10_655 ? 101 AD5 10 HOH M . ? HOH A 202 . ? 23_554 ? 102 AD5 10 ASP B 2 ? ASP B 2 . ? 1_555 ? 103 AD5 10 CPI B 4 ? CPI B 4 . ? 1_555 ? 104 AD5 10 GLY B 5 ? GLY B 5 . ? 1_555 ? 105 AD5 10 ASP B 6 ? ASP B 6 . ? 1_555 ? 106 AD5 10 GLY B 7 ? GLY B 7 . ? 1_555 ? 107 AD5 10 2TL B 10 ? 2TL B 10 . ? 1_555 ? 108 AD5 10 ILE B 11 ? ILE B 11 . ? 1_555 ? 109 AD5 10 9GB I . ? 9GB B 101 . ? 1_555 ? 110 AD5 10 CA J . ? CA B 102 . ? 1_555 ? 111 AD6 7 HOH M . ? HOH A 202 . ? 23_554 ? 112 AD6 7 DNP B 3 ? DNP B 3 . ? 1_555 ? 113 AD6 7 ASP B 6 ? ASP B 6 . ? 1_555 ? 114 AD6 7 GLY B 7 ? GLY B 7 . ? 1_555 ? 115 AD6 7 ILE B 11 ? ILE B 11 . ? 1_555 ? 116 AD6 7 PRO B 12 ? PRO B 12 . ? 1_555 ? 117 AD6 7 HOH N . ? HOH B 202 . ? 10_655 ? 118 AD7 13 ASP A 8 ? ASP A 8 . ? 1_555 ? 119 AD7 13 GLY A 9 ? GLY A 9 . ? 1_555 ? 120 AD7 13 HOH M . ? HOH A 208 . ? 18_554 ? 121 AD7 13 ASP B 6 ? ASP B 6 . ? 1_555 ? 122 AD7 13 GLY B 7 ? GLY B 7 . ? 1_555 ? 123 AD7 13 ASP B 8 ? ASP B 8 . ? 1_555 ? 124 AD7 13 ILE B 11 ? ILE B 11 . ? 1_555 ? 125 AD7 13 PRO B 12 ? PRO B 12 . ? 1_555 ? 126 AD7 13 9GB I . ? 9GB B 101 . ? 1_555 ? 127 AD7 13 CA J . ? CA B 102 . ? 1_555 ? 128 AD7 13 HOH N . ? HOH B 203 . ? 1_555 ? 129 AD7 13 HOH N . ? HOH B 205 . ? 1_555 ? 130 AD7 13 HOH N . ? HOH B 206 . ? 1_555 ? 131 AD8 12 ASP A 8 ? ASP A 8 . ? 1_555 ? 132 AD8 12 HOH M . ? HOH A 208 . ? 18_554 ? 133 AD8 12 DNP B 3 ? DNP B 3 . ? 1_555 ? 134 AD8 12 CPI B 4 ? CPI B 4 . ? 1_555 ? 135 AD8 12 ASP B 6 ? ASP B 6 . ? 1_555 ? 136 AD8 12 GLY B 9 ? GLY B 9 . ? 1_555 ? 137 AD8 12 PRO B 12 ? PRO B 12 . ? 1_555 ? 138 AD8 12 9GB I . ? 9GB B 101 . ? 1_555 ? 139 AD8 12 CA J . ? CA B 102 . ? 1_555 ? 140 AD8 12 HOH N . ? HOH B 203 . ? 1_555 ? 141 AD8 12 HOH N . ? HOH B 205 . ? 1_555 ? 142 AD8 12 HOH N . ? HOH B 206 . ? 1_555 ? # _pdbx_molecule_features.prd_id PRD_002234 _pdbx_molecule_features.name 'Laspartomycin C' _pdbx_molecule_features.type Lipopeptide _pdbx_molecule_features.class Antibiotic _pdbx_molecule_features.details ? # loop_ _pdbx_molecule.instance_id _pdbx_molecule.prd_id _pdbx_molecule.asym_id 1 PRD_002234 A 2 PRD_002234 B # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 2TL N N N N 1 2TL CA C N R 2 2TL CB C N R 3 2TL OG1 O N N 4 2TL CG2 C N N 5 2TL C C N N 6 2TL O O N N 7 2TL OXT O N N 8 2TL H H N N 9 2TL H2 H N N 10 2TL HA H N N 11 2TL HB H N N 12 2TL HG1 H N N 13 2TL HG21 H N N 14 2TL HG22 H N N 15 2TL HG23 H N N 16 2TL HXT H N N 17 9GB C2 C N N 18 9GB C4 C N N 19 9GB C5 C N N 20 9GB C6 C N N 21 9GB O3A O N N 22 9GB PA P N N 23 9GB O1A O N N 24 9GB O2A O N N 25 9GB O1 O N N 26 9GB C1 C N N 27 9GB C3 C N N 28 9GB C7 C N N 29 9GB H1 H N N 30 9GB H2 H N N 31 9GB H3 H N N 32 9GB H4 H N N 33 9GB H5 H N N 34 9GB H6 H N N 35 9GB H7 H N N 36 9GB H8 H N N 37 9GB H9 H N N 38 9GB H10 H N N 39 9GB H11 H N N 40 9GB H12 H N N 41 9GB H13 H N N 42 9GB H14 H N N 43 9GB H15 H N N 44 9GE C C N N 45 9GE O O N N 46 9GE CA C N N 47 9GE C04 C N N 48 9GE C05 C N N 49 9GE C06 C N N 50 9GE O1 O N N 51 9GE H1 H N N 52 9GE H2 H N N 53 9GE H3 H N N 54 9GE H4 H N N 55 9GE H5 H N N 56 9GE H6 H N N 57 9GE H8 H N N 58 9GE C1 C N N 59 9GE C2 C N N 60 9GE C3 C N N 61 9GE C4 C N N 62 9GE C5 C N N 63 9GE C6 C N N 64 9GE C7 C N N 65 9GE C8 C N N 66 9GE C9 C N N 67 9GE C10 C N N 68 9GE H7 H N N 69 9GE H9 H N N 70 9GE H10 H N N 71 9GE H11 H N N 72 9GE H12 H N N 73 9GE H13 H N N 74 9GE H14 H N N 75 9GE H15 H N N 76 9GE H16 H N N 77 9GE H17 H N N 78 9GE H18 H N N 79 9GE H19 H N N 80 9GE H20 H N N 81 9GE H21 H N N 82 9GE H22 H N N 83 9GE H23 H N N 84 9GE H24 H N N 85 9GE H25 H N N 86 9GE H26 H N N 87 9GE H27 H N N 88 9GE H28 H N N 89 ACY C C N N 90 ACY O O N N 91 ACY OXT O N N 92 ACY CH3 C N N 93 ACY HXT H N N 94 ACY H1 H N N 95 ACY H2 H N N 96 ACY H3 H N N 97 ASP N N N N 98 ASP CA C N S 99 ASP C C N N 100 ASP O O N N 101 ASP CB C N N 102 ASP CG C N N 103 ASP OD1 O N N 104 ASP OD2 O N N 105 ASP OXT O N N 106 ASP H H N N 107 ASP H2 H N N 108 ASP HA H N N 109 ASP HB2 H N N 110 ASP HB3 H N N 111 ASP HD2 H N N 112 ASP HXT H N N 113 CA CA CA N N 114 CL CL CL N N 115 CPI N N N N 116 CPI CE C N N 117 CPI CD C N N 118 CPI CG C N N 119 CPI CB C N N 120 CPI CA C N R 121 CPI C C N N 122 CPI O O N N 123 CPI H H N N 124 CPI HE2 H N N 125 CPI HE3 H N N 126 CPI HD2 H N N 127 CPI HD3 H N N 128 CPI HG2 H N N 129 CPI HG3 H N N 130 CPI HB2 H N N 131 CPI HB3 H N N 132 CPI HA H N N 133 CPI OXT O N N 134 CPI HXT H N N 135 DNP N N N N 136 DNP CA C N S 137 DNP CB C N N 138 DNP NG N N N 139 DNP C C N N 140 DNP O O N N 141 DNP OXT O N N 142 DNP H H N N 143 DNP H2 H N N 144 DNP HA H N N 145 DNP HB2 H N N 146 DNP HB3 H N N 147 DNP HG1 H N N 148 DNP HG2 H N N 149 DNP HG3 H N N 150 DNP HXT H N N 151 GLY N N N N 152 GLY CA C N N 153 GLY C C N N 154 GLY O O N N 155 GLY OXT O N N 156 GLY H H N N 157 GLY H2 H N N 158 GLY HA2 H N N 159 GLY HA3 H N N 160 GLY HXT H N N 161 HOH O O N N 162 HOH H1 H N N 163 HOH H2 H N N 164 ILE N N N N 165 ILE CA C N S 166 ILE C C N N 167 ILE O O N N 168 ILE CB C N S 169 ILE CG1 C N N 170 ILE CG2 C N N 171 ILE CD1 C N N 172 ILE OXT O N N 173 ILE H H N N 174 ILE H2 H N N 175 ILE HA H N N 176 ILE HB H N N 177 ILE HG12 H N N 178 ILE HG13 H N N 179 ILE HG21 H N N 180 ILE HG22 H N N 181 ILE HG23 H N N 182 ILE HD11 H N N 183 ILE HD12 H N N 184 ILE HD13 H N N 185 ILE HXT H N N 186 PRO N N N N 187 PRO CA C N S 188 PRO C C N N 189 PRO O O N N 190 PRO CB C N N 191 PRO CG C N N 192 PRO CD C N N 193 PRO OXT O N N 194 PRO H H N N 195 PRO HA H N N 196 PRO HB2 H N N 197 PRO HB3 H N N 198 PRO HG2 H N N 199 PRO HG3 H N N 200 PRO HD2 H N N 201 PRO HD3 H N N 202 PRO HXT H N N 203 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2TL N CA sing N N 1 2TL CA CB sing N N 2 2TL CA C sing N N 3 2TL CB OG1 sing N N 4 2TL CB CG2 sing N N 5 2TL C O doub N N 6 2TL C OXT sing N N 7 2TL N H sing N N 8 2TL N H2 sing N N 9 2TL CA HA sing N N 10 2TL CB HB sing N N 11 2TL OG1 HG1 sing N N 12 2TL CG2 HG21 sing N N 13 2TL CG2 HG22 sing N N 14 2TL CG2 HG23 sing N N 15 2TL OXT HXT sing N N 16 9GB C6 C5 sing N N 17 9GB C6 C7 sing N N 18 9GB C5 C3 sing N N 19 9GB C3 C4 sing N N 20 9GB C3 C2 doub N E 21 9GB C2 C1 sing N N 22 9GB O1 C1 sing N N 23 9GB O1 PA sing N N 24 9GB O3A PA doub N N 25 9GB PA O1A sing N N 26 9GB PA O2A sing N N 27 9GB C2 H1 sing N N 28 9GB C4 H2 sing N N 29 9GB C4 H3 sing N N 30 9GB C4 H4 sing N N 31 9GB C5 H5 sing N N 32 9GB C5 H6 sing N N 33 9GB C6 H7 sing N N 34 9GB C6 H8 sing N N 35 9GB O1A H9 sing N N 36 9GB O2A H10 sing N N 37 9GB C1 H11 sing N N 38 9GB C1 H12 sing N N 39 9GB C7 H13 sing N N 40 9GB C7 H14 sing N N 41 9GB C7 H15 sing N N 42 9GE C06 C05 sing N N 43 9GE C05 C04 sing N N 44 9GE C04 CA doub N E 45 9GE CA C sing N N 46 9GE C O doub N N 47 9GE C O1 sing N N 48 9GE CA H1 sing N N 49 9GE C04 H2 sing N N 50 9GE C05 H3 sing N N 51 9GE C05 H4 sing N N 52 9GE C06 H5 sing N N 53 9GE C06 H6 sing N N 54 9GE O1 H8 sing N N 55 9GE C06 C1 sing N N 56 9GE C1 C2 sing N N 57 9GE C2 C3 sing N N 58 9GE C3 C4 sing N N 59 9GE C4 C5 sing N N 60 9GE C5 C6 sing N N 61 9GE C6 C7 sing N N 62 9GE C7 C8 sing N N 63 9GE C8 C9 sing N N 64 9GE C8 C10 sing N N 65 9GE C1 H7 sing N N 66 9GE C1 H9 sing N N 67 9GE C2 H10 sing N N 68 9GE C2 H11 sing N N 69 9GE C3 H12 sing N N 70 9GE C3 H13 sing N N 71 9GE C4 H14 sing N N 72 9GE C4 H15 sing N N 73 9GE C5 H16 sing N N 74 9GE C5 H17 sing N N 75 9GE C6 H18 sing N N 76 9GE C6 H19 sing N N 77 9GE C7 H20 sing N N 78 9GE C7 H21 sing N N 79 9GE C8 H22 sing N N 80 9GE C9 H23 sing N N 81 9GE C9 H24 sing N N 82 9GE C9 H25 sing N N 83 9GE C10 H26 sing N N 84 9GE C10 H27 sing N N 85 9GE C10 H28 sing N N 86 ACY C O doub N N 87 ACY C OXT sing N N 88 ACY C CH3 sing N N 89 ACY OXT HXT sing N N 90 ACY CH3 H1 sing N N 91 ACY CH3 H2 sing N N 92 ACY CH3 H3 sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 CPI N CE sing N N 109 CPI N CA sing N N 110 CPI N H sing N N 111 CPI CE CD sing N N 112 CPI CE HE2 sing N N 113 CPI CE HE3 sing N N 114 CPI CD CG sing N N 115 CPI CD HD2 sing N N 116 CPI CD HD3 sing N N 117 CPI CG CB sing N N 118 CPI CG HG2 sing N N 119 CPI CG HG3 sing N N 120 CPI CB CA sing N N 121 CPI CB HB2 sing N N 122 CPI CB HB3 sing N N 123 CPI CA C sing N N 124 CPI CA HA sing N N 125 CPI C O doub N N 126 CPI C OXT sing N N 127 CPI OXT HXT sing N N 128 DNP N CA sing N N 129 DNP N H sing N N 130 DNP N H2 sing N N 131 DNP CA CB sing N N 132 DNP CA C sing N N 133 DNP CA HA sing N N 134 DNP CB NG sing N N 135 DNP CB HB2 sing N N 136 DNP CB HB3 sing N N 137 DNP NG HG1 sing N N 138 DNP NG HG2 sing N N 139 DNP NG HG3 sing N N 140 DNP C O doub N N 141 DNP C OXT sing N N 142 DNP OXT HXT sing N N 143 GLY N CA sing N N 144 GLY N H sing N N 145 GLY N H2 sing N N 146 GLY CA C sing N N 147 GLY CA HA2 sing N N 148 GLY CA HA3 sing N N 149 GLY C O doub N N 150 GLY C OXT sing N N 151 GLY OXT HXT sing N N 152 HOH O H1 sing N N 153 HOH O H2 sing N N 154 ILE N CA sing N N 155 ILE N H sing N N 156 ILE N H2 sing N N 157 ILE CA C sing N N 158 ILE CA CB sing N N 159 ILE CA HA sing N N 160 ILE C O doub N N 161 ILE C OXT sing N N 162 ILE CB CG1 sing N N 163 ILE CB CG2 sing N N 164 ILE CB HB sing N N 165 ILE CG1 CD1 sing N N 166 ILE CG1 HG12 sing N N 167 ILE CG1 HG13 sing N N 168 ILE CG2 HG21 sing N N 169 ILE CG2 HG22 sing N N 170 ILE CG2 HG23 sing N N 171 ILE CD1 HD11 sing N N 172 ILE CD1 HD12 sing N N 173 ILE CD1 HD13 sing N N 174 ILE OXT HXT sing N N 175 PRO N CA sing N N 176 PRO N CD sing N N 177 PRO N H sing N N 178 PRO CA C sing N N 179 PRO CA CB sing N N 180 PRO CA HA sing N N 181 PRO C O doub N N 182 PRO C OXT sing N N 183 PRO CB CG sing N N 184 PRO CB HB2 sing N N 185 PRO CB HB3 sing N N 186 PRO CG CD sing N N 187 PRO CG HG2 sing N N 188 PRO CG HG3 sing N N 189 PRO CD HD2 sing N N 190 PRO CD HD3 sing N N 191 PRO OXT HXT sing N N 192 # _pdbx_audit_support.funding_organization ? _pdbx_audit_support.country Netherlands _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 5O0Z _atom_sites.fract_transf_matrix[1][1] 0.017564 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017564 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017564 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA CL N O P # loop_