HEADER OXIDOREDUCTASE 18-MAY-17 5O1N TITLE CRYSTAL STRUCTURE OF HUMAN AMINOADIPATE SEMIALDEHYDE SYNTHASE, TITLE 2 SACCHAROPINE DEHYDROGENASE DOMAIN WITH N-[(2S)-2-PYRROLIDINYLMETHYL]- TITLE 3 TRIFLUOROMETHANESULFONAMIDE BOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-AMINOADIPIC SEMIALDEHYDE SYNTHASE, MITOCHONDRIAL; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 455-926; COMPND 5 SYNONYM: LKR/SDH; COMPND 6 EC: 1.5.1.8,1.5.1.9; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AASS; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PFB-LIC-BSE KEYWDS HUMAN AMINOADIPATE SEMIALDEHYDE SYNTHASE, SACCHAROPINE DEHYDROGENASE KEYWDS 2 DOMAIN WITH N-[(2S)-2-PYRROLIDINYLMETHYL]- KEYWDS 3 TRIFLUOROMETHANESULFONAMIDE BOUND, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR J.KOPEC,E.REMBEZA,I.A.PENA,C.STRAIN-DAMERELL,S.GOUBIN,R.SETHI, AUTHOR 2 S.VELUPILLAI,R.TALON,P.COLLINS,T.KROJER,M.MCLAUGHLIN,N.BURGESS- AUTHOR 3 BROWN,C.ARROWSMITH,A.EDWARDS,C.BOUNTRA,P.BRENNAN,F.VON DELFT, AUTHOR 4 P.ARRUDA,W.W.YUE REVDAT 2 17-JAN-24 5O1N 1 REMARK REVDAT 1 31-MAY-17 5O1N 0 JRNL AUTH J.KOPEC,W.W.YUE JRNL TITL CRYSTAL STRUCTURE OF HUMAN AMINOADIPATE SEMIALDEHYDE JRNL TITL 2 SYNTHASE, SACCHAROPINE DEHYDROGENASE DOMAIN WITH JRNL TITL 3 N-[(2S)-2-PYRROLIDINYLMETHYL]-TRIFLUOROMETHANESULFONAMIDE JRNL TITL 4 BOUND JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.28 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.28 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 26469 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.266 REMARK 3 R VALUE (WORKING SET) : 0.265 REMARK 3 FREE R VALUE : 0.286 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1371 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.28 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.34 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1887 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.78 REMARK 3 BIN R VALUE (WORKING SET) : 0.4500 REMARK 3 BIN FREE R VALUE SET COUNT : 97 REMARK 3 BIN FREE R VALUE : 0.4660 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3284 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 29 REMARK 3 SOLVENT ATOMS : 25 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 55.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 68.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.58000 REMARK 3 B22 (A**2) : 2.58000 REMARK 3 B33 (A**2) : -5.16000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.311 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.236 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.270 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.463 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3373 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3257 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4577 ; 0.997 ; 1.990 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7504 ; 0.835 ; 2.995 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 440 ; 4.833 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 118 ;35.176 ;25.169 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 557 ;11.168 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;11.686 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 537 ; 0.055 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3764 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 675 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1766 ; 1.225 ; 7.044 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1765 ; 1.225 ; 7.041 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2204 ; 2.209 ;10.558 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2205 ; 2.209 ;10.560 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1606 ; 0.938 ; 6.982 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1606 ; 0.935 ; 6.982 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2374 ; 1.684 ;10.468 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3522 ; 3.492 ;54.303 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3523 ; 3.492 ;54.313 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5O1N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1200005035. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAY-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97623 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28144 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.280 REMARK 200 RESOLUTION RANGE LOW (A) : 44.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.30 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.28 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5L76 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG3350 -- 0.3M SODIUM MALONATE -- REMARK 280 0.1M TRIS PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 285K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.94650 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 44.69800 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 44.69800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 110.91975 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 44.69800 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 44.69800 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 36.97325 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 44.69800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 44.69800 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 110.91975 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 44.69800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 44.69800 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 36.97325 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 73.94650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 -89.39600 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 89.39600 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 295.78600 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 430 REMARK 465 GLY A 431 REMARK 465 HIS A 432 REMARK 465 HIS A 433 REMARK 465 HIS A 434 REMARK 465 HIS A 435 REMARK 465 HIS A 436 REMARK 465 HIS A 437 REMARK 465 SER A 438 REMARK 465 SER A 439 REMARK 465 GLY A 440 REMARK 465 VAL A 441 REMARK 465 ASP A 442 REMARK 465 LEU A 443 REMARK 465 GLY A 444 REMARK 465 THR A 445 REMARK 465 GLU A 446 REMARK 465 ASN A 447 REMARK 465 LEU A 448 REMARK 465 TYR A 449 REMARK 465 PHE A 450 REMARK 465 GLN A 451 REMARK 465 SER A 452 REMARK 465 MET A 453 REMARK 465 ALA A 454 REMARK 465 LEU A 455 REMARK 465 PRO A 456 REMARK 465 ASP A 457 REMARK 465 LYS A 458 REMARK 465 TYR A 459 REMARK 465 LYS A 460 REMARK 465 TYR A 461 REMARK 465 ILE A 462 REMARK 465 GLN A 463 REMARK 465 THR A 464 REMARK 465 LEU A 465 REMARK 465 ARG A 466 REMARK 465 GLU A 467 REMARK 465 SER A 468 REMARK 465 ARG A 469 REMARK 465 GLU A 470 REMARK 465 ARG A 471 REMARK 465 ALA A 472 REMARK 465 GLN A 473 REMARK 465 SER A 474 REMARK 465 LEU A 475 REMARK 465 SER A 476 REMARK 465 MET A 477 REMARK 465 GLY A 478 REMARK 465 THR A 479 REMARK 465 ARG A 480 REMARK 465 ALA A 750 REMARK 465 PHE A 751 REMARK 465 ARG A 752 REMARK 465 PRO A 753 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 481 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 482 CG CD CE NZ REMARK 470 ASN A 504 CG OD1 ND2 REMARK 470 GLU A 506 CG CD OE1 OE2 REMARK 470 LYS A 514 CG CD CE NZ REMARK 470 GLU A 518 CG CD OE1 OE2 REMARK 470 LYS A 522 CG CD CE NZ REMARK 470 LYS A 535 CG CD CE NZ REMARK 470 GLU A 537 CG CD OE1 OE2 REMARK 470 GLU A 538 CG CD OE1 OE2 REMARK 470 LYS A 546 CG CD CE NZ REMARK 470 LYS A 564 CG CD CE NZ REMARK 470 LYS A 570 CG CD CE NZ REMARK 470 LYS A 584 CG CD CE NZ REMARK 470 LYS A 588 CG CD CE NZ REMARK 470 GLU A 710 CG CD OE1 OE2 REMARK 470 GLU A 754 CG CD OE1 OE2 REMARK 470 GLU A 781 CG CD OE1 OE2 REMARK 470 LYS A 786 CE NZ REMARK 470 LEU A 787 CG CD1 CD2 REMARK 470 GLN A 810 CG CD OE1 NE2 REMARK 470 GLU A 812 CG CD OE1 OE2 REMARK 470 LYS A 893 CG CD CE NZ REMARK 470 LYS A 912 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 490 -72.26 67.91 REMARK 500 GLN A 536 57.83 -101.35 REMARK 500 SER A 577 -168.74 -79.13 REMARK 500 ASP A 704 110.06 76.20 REMARK 500 ALA A 755 48.90 -107.75 REMARK 500 PRO A 772 82.73 -65.10 REMARK 500 SER A 774 112.46 68.20 REMARK 500 LEU A 787 -174.63 62.40 REMARK 500 ASN A 865 61.84 -101.49 REMARK 500 PRO A 898 46.13 -95.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9H8 A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 1004 DBREF 5O1N A 455 926 UNP Q9UDR5 AASS_HUMAN 455 926 SEQADV 5O1N MET A 430 UNP Q9UDR5 INITIATING METHIONINE SEQADV 5O1N GLY A 431 UNP Q9UDR5 EXPRESSION TAG SEQADV 5O1N HIS A 432 UNP Q9UDR5 EXPRESSION TAG SEQADV 5O1N HIS A 433 UNP Q9UDR5 EXPRESSION TAG SEQADV 5O1N HIS A 434 UNP Q9UDR5 EXPRESSION TAG SEQADV 5O1N HIS A 435 UNP Q9UDR5 EXPRESSION TAG SEQADV 5O1N HIS A 436 UNP Q9UDR5 EXPRESSION TAG SEQADV 5O1N HIS A 437 UNP Q9UDR5 EXPRESSION TAG SEQADV 5O1N SER A 438 UNP Q9UDR5 EXPRESSION TAG SEQADV 5O1N SER A 439 UNP Q9UDR5 EXPRESSION TAG SEQADV 5O1N GLY A 440 UNP Q9UDR5 EXPRESSION TAG SEQADV 5O1N VAL A 441 UNP Q9UDR5 EXPRESSION TAG SEQADV 5O1N ASP A 442 UNP Q9UDR5 EXPRESSION TAG SEQADV 5O1N LEU A 443 UNP Q9UDR5 EXPRESSION TAG SEQADV 5O1N GLY A 444 UNP Q9UDR5 EXPRESSION TAG SEQADV 5O1N THR A 445 UNP Q9UDR5 EXPRESSION TAG SEQADV 5O1N GLU A 446 UNP Q9UDR5 EXPRESSION TAG SEQADV 5O1N ASN A 447 UNP Q9UDR5 EXPRESSION TAG SEQADV 5O1N LEU A 448 UNP Q9UDR5 EXPRESSION TAG SEQADV 5O1N TYR A 449 UNP Q9UDR5 EXPRESSION TAG SEQADV 5O1N PHE A 450 UNP Q9UDR5 EXPRESSION TAG SEQADV 5O1N GLN A 451 UNP Q9UDR5 EXPRESSION TAG SEQADV 5O1N SER A 452 UNP Q9UDR5 EXPRESSION TAG SEQADV 5O1N MET A 453 UNP Q9UDR5 EXPRESSION TAG SEQADV 5O1N ALA A 454 UNP Q9UDR5 EXPRESSION TAG SEQADV 5O1N SER A 615 UNP Q9UDR5 THR 615 CONFLICT SEQRES 1 A 497 MET GLY HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP SEQRES 2 A 497 LEU GLY THR GLU ASN LEU TYR PHE GLN SER MET ALA LEU SEQRES 3 A 497 PRO ASP LYS TYR LYS TYR ILE GLN THR LEU ARG GLU SER SEQRES 4 A 497 ARG GLU ARG ALA GLN SER LEU SER MET GLY THR ARG ARG SEQRES 5 A 497 LYS VAL LEU VAL LEU GLY SER GLY TYR ILE SER GLU PRO SEQRES 6 A 497 VAL LEU GLU TYR LEU SER ARG ASP GLY ASN ILE GLU ILE SEQRES 7 A 497 THR VAL GLY SER ASP MET LYS ASN GLN ILE GLU GLN LEU SEQRES 8 A 497 GLY LYS LYS TYR ASN ILE ASN PRO VAL SER MET ASP ILE SEQRES 9 A 497 CYS LYS GLN GLU GLU LYS LEU GLY PHE LEU VAL ALA LYS SEQRES 10 A 497 GLN ASP LEU VAL ILE SER LEU LEU PRO TYR VAL LEU HIS SEQRES 11 A 497 PRO LEU VAL ALA LYS ALA CYS ILE THR ASN LYS VAL ASN SEQRES 12 A 497 MET VAL THR ALA SER TYR ILE THR PRO ALA LEU LYS GLU SEQRES 13 A 497 LEU GLU LYS SER VAL GLU ASP ALA GLY ILE THR ILE ILE SEQRES 14 A 497 GLY GLU LEU GLY LEU ASP PRO GLY LEU ASP HIS MET LEU SEQRES 15 A 497 ALA MET GLU SER ILE ASP LYS ALA LYS GLU VAL GLY ALA SEQRES 16 A 497 THR ILE GLU SER TYR ILE SER TYR CYS GLY GLY LEU PRO SEQRES 17 A 497 ALA PRO GLU HIS SER ASN ASN PRO LEU ARG TYR LYS PHE SEQRES 18 A 497 SER TRP SER PRO VAL GLY VAL LEU MET ASN VAL MET GLN SEQRES 19 A 497 SER ALA THR TYR LEU LEU ASP GLY LYS VAL VAL ASN VAL SEQRES 20 A 497 ALA GLY GLY ILE SER PHE LEU ASP ALA VAL THR SER MET SEQRES 21 A 497 ASP PHE PHE PRO GLY LEU ASN LEU GLU GLY TYR PRO ASN SEQRES 22 A 497 ARG ASP SER THR LYS TYR ALA GLU ILE TYR GLY ILE SER SEQRES 23 A 497 SER ALA HIS THR LEU LEU ARG GLY THR LEU ARG TYR LYS SEQRES 24 A 497 GLY TYR MET LYS ALA LEU ASN GLY PHE VAL LYS LEU GLY SEQRES 25 A 497 LEU ILE ASN ARG GLU ALA LEU PRO ALA PHE ARG PRO GLU SEQRES 26 A 497 ALA ASN PRO LEU THR TRP LYS GLN LEU LEU CYS ASP LEU SEQRES 27 A 497 VAL GLY ILE SER PRO SER SER GLU HIS ASP VAL LEU LYS SEQRES 28 A 497 GLU ALA VAL LEU LYS LYS LEU GLY GLY ASP ASN THR GLN SEQRES 29 A 497 LEU GLU ALA ALA GLU TRP LEU GLY LEU LEU GLY ASP GLU SEQRES 30 A 497 GLN VAL PRO GLN ALA GLU SER ILE LEU ASP ALA LEU SER SEQRES 31 A 497 LYS HIS LEU VAL MET LYS LEU SER TYR GLY PRO GLU GLU SEQRES 32 A 497 LYS ASP MET ILE VAL MET ARG ASP SER PHE GLY ILE ARG SEQRES 33 A 497 HIS PRO SER GLY HIS LEU GLU HIS LYS THR ILE ASP LEU SEQRES 34 A 497 VAL ALA TYR GLY ASP ILE ASN GLY PHE SER ALA MET ALA SEQRES 35 A 497 LYS THR VAL GLY LEU PRO THR ALA MET ALA ALA LYS MET SEQRES 36 A 497 LEU LEU ASP GLY GLU ILE GLY ALA LYS GLY LEU MET GLY SEQRES 37 A 497 PRO PHE SER LYS GLU ILE TYR GLY PRO ILE LEU GLU ARG SEQRES 38 A 497 ILE LYS ALA GLU GLY ILE ILE TYR THR THR GLN SER THR SEQRES 39 A 497 ILE LYS PRO HET 9H8 A1001 14 HET DMS A1002 4 HET EDO A1003 4 HET PEG A1004 7 HETNAM 9H8 1,1,1-TRIS(FLUORANYL)-~{N}-[[(2~{S})-PYRROLIDIN-2- HETNAM 2 9H8 YL]METHYL]METHANESULFONAMIDE HETNAM DMS DIMETHYL SULFOXIDE HETNAM EDO 1,2-ETHANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN EDO ETHYLENE GLYCOL FORMUL 2 9H8 C6 H11 F3 N2 O2 S FORMUL 3 DMS C2 H6 O S FORMUL 4 EDO C2 H6 O2 FORMUL 5 PEG C4 H10 O3 FORMUL 6 HOH *25(H2 O) HELIX 1 AA1 ILE A 491 SER A 500 1 10 HELIX 2 AA2 MET A 513 TYR A 524 1 12 HELIX 3 AA3 GLN A 536 LYS A 546 1 11 HELIX 4 AA4 PRO A 555 VAL A 557 5 3 HELIX 5 AA5 LEU A 558 ASN A 569 1 12 HELIX 6 AA6 THR A 580 GLU A 585 1 6 HELIX 7 AA7 LEU A 586 GLY A 594 1 9 HELIX 8 AA8 GLY A 606 VAL A 622 1 17 HELIX 9 AA9 PRO A 639 SER A 642 5 4 HELIX 10 AB1 PRO A 654 GLN A 663 1 10 HELIX 11 AB2 GLY A 678 VAL A 686 5 9 HELIX 12 AB3 LYS A 707 GLY A 713 1 7 HELIX 13 AB4 GLY A 729 LEU A 740 1 12 HELIX 14 AB5 THR A 759 GLY A 769 1 11 HELIX 15 AB6 SER A 774 LYS A 786 1 13 HELIX 16 AB7 ASP A 790 GLY A 801 1 12 HELIX 17 AB8 SER A 813 LEU A 826 1 14 HELIX 18 AB9 SER A 868 GLY A 888 1 21 HELIX 19 AC1 SER A 900 ILE A 911 1 12 SHEET 1 AA1 7 ASN A 527 SER A 530 0 SHEET 2 AA1 7 GLU A 506 SER A 511 1 N VAL A 509 O ASN A 527 SHEET 3 AA1 7 LYS A 482 LEU A 486 1 N VAL A 485 O THR A 508 SHEET 4 AA1 7 LEU A 549 SER A 552 1 O ILE A 551 N LEU A 484 SHEET 5 AA1 7 ASN A 572 THR A 575 1 O VAL A 574 N SER A 552 SHEET 6 AA1 7 THR A 596 ILE A 598 1 O ILE A 598 N THR A 575 SHEET 7 AA1 7 GLY A 894 MET A 896 1 O GLY A 894 N ILE A 597 SHEET 1 AA2 7 THR A 687 MET A 689 0 SHEET 2 AA2 7 LEU A 697 PRO A 701 -1 O GLY A 699 N THR A 687 SHEET 3 AA2 7 THR A 719 TYR A 727 -1 O ARG A 726 N GLU A 698 SHEET 4 AA2 7 THR A 625 PRO A 637 1 N TYR A 629 O LEU A 721 SHEET 5 AA2 7 ASP A 834 ARG A 845 -1 O GLY A 843 N GLU A 627 SHEET 6 AA2 7 LEU A 851 TYR A 861 -1 O GLU A 852 N ILE A 844 SHEET 7 AA2 7 TYR A 918 LYS A 925 -1 O GLN A 921 N THR A 855 SHEET 1 AA3 2 ALA A 665 LEU A 669 0 SHEET 2 AA3 2 LYS A 672 VAL A 676 -1 O VAL A 674 N TYR A 667 SSBOND 1 CYS A 534 CYS A 534 1555 8667 2.02 CISPEP 1 ASP A 604 PRO A 605 0 8.03 SITE 1 AC1 12 ASP A 604 GLY A 634 GLY A 635 TYR A 648 SITE 2 AC1 12 TRP A 652 ASN A 702 THR A 724 ARG A 726 SITE 3 AC1 12 MET A 870 DMS A1002 PEG A1004 HOH A1107 SITE 1 AC2 6 TYR A 648 PHE A 650 SER A 651 TRP A 652 SITE 2 AC2 6 SER A 653 9H8 A1001 SITE 1 AC3 2 SER A 848 HIS A 850 SITE 1 AC4 5 ALA A 576 SER A 577 LEU A 601 ASP A 604 SITE 2 AC4 5 9H8 A1001 CRYST1 89.396 89.396 147.893 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011186 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011186 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006762 0.00000