data_5O4D # _entry.id 5O4D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5O4D pdb_00005o4d 10.2210/pdb5o4d/pdb WWPDB D_1200005120 ? ? BMRB 34145 ? 10.13018/BMR34145 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-06-13 2 'Structure model' 1 1 2019-04-24 3 'Structure model' 1 2 2019-05-08 4 'Structure model' 1 3 2024-05-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' pdbx_database_proc 4 2 'Structure model' pdbx_seq_map_depositor_info 5 3 'Structure model' pdbx_nmr_software 6 3 'Structure model' pdbx_seq_map_depositor_info 7 4 'Structure model' chem_comp_atom 8 4 'Structure model' chem_comp_bond 9 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.title' 9 2 'Structure model' '_citation.year' 10 2 'Structure model' '_citation_author.identifier_ORCID' 11 2 'Structure model' '_pdbx_seq_map_depositor_info.one_letter_code_mod' 12 3 'Structure model' '_pdbx_nmr_software.name' 13 3 'Structure model' '_pdbx_seq_map_depositor_info.one_letter_code_mod' 14 4 'Structure model' '_database_2.pdbx_DOI' 15 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5O4D _pdbx_database_status.recvd_initial_deposition_date 2017-05-29 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'G-quadruplex of Human papillomavirus type 52' _pdbx_database_related.db_id 34145 _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Marusic, M.' 1 ? 'Plavec, J.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country CH _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Molecules _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1420-3049 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 24 _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Towards Understanding of Polymorphism of the G-rich Region of Human Papillomavirus Type 52.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.3390/molecules24071294 _citation.pdbx_database_id_PubMed 30987050 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Marusic, M.' 1 0000-0001-6595-193X primary 'Plavec, J.' 2 0000-0003-1570-8602 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description ;DNA (5'-D(*GP*GP*GP*TP*AP*GP*GP*GP*CP*AP*GP*GP*GP*GP*AP*CP*AP*CP*AP*GP*GP*GP*T)-3') ; _entity.formula_weight 7276.684 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;(DG)(DG)(DG)(DT)(DA)(DG)(DG)(DG)(DC)(DA)(DG)(DG)(DG)(DG)(DA)(DC)(DA)(DC)(DA)(DG) (DG)(DG)(DT) ; _entity_poly.pdbx_seq_one_letter_code_can GGGTAGGGCAGGGGACACAGGGT _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DG n 1 3 DG n 1 4 DT n 1 5 DA n 1 6 DG n 1 7 DG n 1 8 DG n 1 9 DC n 1 10 DA n 1 11 DG n 1 12 DG n 1 13 DG n 1 14 DG n 1 15 DA n 1 16 DC n 1 17 DA n 1 18 DC n 1 19 DA n 1 20 DG n 1 21 DG n 1 22 DG n 1 23 DT n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 23 _pdbx_entity_src_syn.organism_scientific 'Human papillomavirus type 52' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 10618 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG DG A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DG 3 3 3 DG DG A . n A 1 4 DT 4 4 4 DT DT A . n A 1 5 DA 5 5 5 DA DA A . n A 1 6 DG 6 6 6 DG DG A . n A 1 7 DG 7 7 7 DG DG A . n A 1 8 DG 8 8 8 DG DG A . n A 1 9 DC 9 9 9 DC DC A . n A 1 10 DA 10 10 10 DA DA A . n A 1 11 DG 11 11 11 DG DG A . n A 1 12 DG 12 12 12 DG DG A . n A 1 13 DG 13 13 13 DG DG A . n A 1 14 DG 14 14 14 DG DG A . n A 1 15 DA 15 15 15 DA DA A . n A 1 16 DC 16 16 16 DC DC A . n A 1 17 DA 17 17 17 DA DA A . n A 1 18 DC 18 18 18 DC DC A . n A 1 19 DA 19 19 19 DA DA A . n A 1 20 DG 20 20 20 DG DG A . n A 1 21 DG 21 21 21 DG DG A . n A 1 22 DG 22 22 22 DG DG A . n A 1 23 DT 23 23 23 DT DT A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5O4D _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 5O4D _struct.title 'G-quadruplex of Human papillomavirus type 52' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5O4D _struct_keywords.text 'G-quadruplex, DNA, HPV52' _struct_keywords.pdbx_keywords DNA # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5O4D _struct_ref.pdbx_db_accession 5O4D _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5O4D _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 23 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 5O4D _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 23 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 23 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 3990 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'native gel electrophoresis' _pdbx_struct_assembly_auth_evidence.details 'structure runs as a monomer on native PAGE gel' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 1 N7 ? ? ? 1_555 A DG 7 N2 ? ? A DG 1 A DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog2 hydrog ? ? A DG 1 O6 ? ? ? 1_555 A DG 7 N1 ? ? A DG 1 A DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog3 hydrog ? ? A DG 1 N1 ? ? ? 1_555 A DG 13 O6 ? ? A DG 1 A DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? A DG 1 N2 ? ? ? 1_555 A DG 13 N7 ? ? A DG 1 A DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DG 6 O6 ? ? A DG 2 A DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DG 6 N7 ? ? A DG 2 A DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A DG 2 N7 ? ? ? 1_555 A DG 12 N2 ? ? A DG 2 A DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog8 hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DG 12 N1 ? ? A DG 2 A DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DA 5 N7 ? ? A DG 3 A DA 5 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog10 hydrog ? ? A DG 3 N3 ? ? ? 1_555 A DA 5 N6 ? ? A DG 3 A DA 5 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog11 hydrog ? ? A DA 5 N6 ? ? ? 1_555 A DA 19 N1 ? ? A DA 5 A DA 19 1_555 ? ? ? ? ? ? 'DA-DA MISPAIR' ? ? ? hydrog12 hydrog ? ? A DG 6 N1 ? ? ? 1_555 A DG 20 O6 ? ? A DG 6 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog13 hydrog ? ? A DG 6 N2 ? ? ? 1_555 A DG 20 N7 ? ? A DG 6 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog14 hydrog ? ? A DG 7 N7 ? ? ? 1_555 A DG 21 N2 ? ? A DG 7 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A DG 7 O6 ? ? ? 1_555 A DG 21 N1 ? ? A DG 7 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A DG 8 N1 ? ? ? 1_555 A DG 11 O6 ? ? A DG 8 A DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A DG 8 N2 ? ? ? 1_555 A DG 11 N7 ? ? A DG 8 A DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A DG 8 N7 ? ? ? 1_555 A DG 22 N2 ? ? A DG 8 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A DG 8 O6 ? ? ? 1_555 A DG 22 N1 ? ? A DG 8 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A DG 11 N1 ? ? ? 1_555 A DG 14 O6 ? ? A DG 11 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A DG 11 N2 ? ? ? 1_555 A DG 14 N7 ? ? A DG 11 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A DG 12 N7 ? ? ? 1_555 A DG 20 N2 ? ? A DG 12 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A DG 12 O6 ? ? ? 1_555 A DG 20 N1 ? ? A DG 12 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? A DG 13 N2 ? ? ? 1_555 A DA 15 N1 ? ? A DG 13 A DA 15 1_555 ? ? ? ? ? ? 'DG-DA MISPAIR' ? ? ? hydrog25 hydrog ? ? A DG 13 N1 ? ? ? 1_555 A DG 21 O6 ? ? A DG 13 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog26 hydrog ? ? A DG 13 N2 ? ? ? 1_555 A DG 21 N7 ? ? A DG 13 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog27 hydrog ? ? A DG 14 N1 ? ? ? 1_555 A DG 22 O6 ? ? A DG 14 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog28 hydrog ? ? A DG 14 N2 ? ? ? 1_555 A DG 22 N7 ? ? A DG 14 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog29 hydrog ? ? A DA 15 N6 ? ? ? 1_555 A DG 21 N7 ? ? A DA 15 A DG 21 1_555 ? ? ? ? ? ? 'DA-DG MISPAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 5 _pdbx_validate_rmsd_bond.auth_atom_id_1 "C5'" _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 DA _pdbx_validate_rmsd_bond.auth_seq_id_1 19 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 "C4'" _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 DA _pdbx_validate_rmsd_bond.auth_seq_id_2 19 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.554 _pdbx_validate_rmsd_bond.bond_target_value 1.512 _pdbx_validate_rmsd_bond.bond_deviation 0.042 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.007 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 114.68 108.30 6.38 0.30 N 2 1 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 110.25 108.30 1.95 0.30 N 3 1 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.64 108.30 2.34 0.30 N 4 1 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 112.12 108.30 3.82 0.30 N 5 1 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.18 122.90 -3.72 0.60 N 6 1 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.06 117.00 -3.94 0.50 N 7 1 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.67 117.70 3.97 0.50 N 8 1 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 110.98 118.60 -7.62 0.60 N 9 1 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 114.05 108.30 5.75 0.30 N 10 1 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 110.45 108.30 2.15 0.30 N 11 1 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 112.98 108.30 4.68 0.30 N 12 1 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 111.13 108.30 2.83 0.30 N 13 1 N3 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 117.17 121.90 -4.73 0.70 N 14 1 C5 A DA 10 ? ? C6 A DA 10 ? ? N1 A DA 10 ? ? 121.21 117.70 3.51 0.50 N 15 1 N1 A DA 10 ? ? C6 A DA 10 ? ? N6 A DA 10 ? ? 113.71 118.60 -4.89 0.60 N 16 1 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 110.54 108.30 2.24 0.30 N 17 1 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 110.21 108.30 1.91 0.30 N 18 1 "O4'" A DA 15 ? ? "C1'" A DA 15 ? ? N9 A DA 15 ? ? 111.64 108.30 3.34 0.30 N 19 1 C5 A DA 15 ? ? C6 A DA 15 ? ? N1 A DA 15 ? ? 121.74 117.70 4.04 0.50 N 20 1 N1 A DA 15 ? ? C6 A DA 15 ? ? N6 A DA 15 ? ? 114.11 118.60 -4.49 0.60 N 21 1 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 111.49 108.30 3.19 0.30 N 22 1 N3 A DC 16 ? ? C2 A DC 16 ? ? O2 A DC 16 ? ? 117.13 121.90 -4.77 0.70 N 23 1 "O4'" A DA 17 ? ? "C1'" A DA 17 ? ? N9 A DA 17 ? ? 112.93 108.30 4.63 0.30 N 24 1 C4 A DA 17 ? ? C5 A DA 17 ? ? C6 A DA 17 ? ? 113.73 117.00 -3.27 0.50 N 25 1 C5 A DA 17 ? ? C6 A DA 17 ? ? N1 A DA 17 ? ? 121.46 117.70 3.76 0.50 N 26 1 N1 A DA 17 ? ? C6 A DA 17 ? ? N6 A DA 17 ? ? 112.96 118.60 -5.64 0.60 N 27 1 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 111.20 108.30 2.90 0.30 N 28 1 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 117.08 121.90 -4.82 0.70 N 29 1 "O4'" A DA 19 ? ? "C1'" A DA 19 ? ? N9 A DA 19 ? ? 114.98 108.30 6.68 0.30 N 30 1 C4 A DA 19 ? ? C5 A DA 19 ? ? C6 A DA 19 ? ? 113.93 117.00 -3.07 0.50 N 31 1 C5 A DA 19 ? ? C6 A DA 19 ? ? N1 A DA 19 ? ? 121.28 117.70 3.58 0.50 N 32 1 N1 A DA 19 ? ? C6 A DA 19 ? ? N6 A DA 19 ? ? 112.90 118.60 -5.70 0.60 N 33 1 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 114.59 108.30 6.29 0.30 N 34 1 "O4'" A DG 22 ? ? "C1'" A DG 22 ? ? N9 A DG 22 ? ? 112.51 108.30 4.21 0.30 N 35 1 "O4'" A DT 23 ? ? "C1'" A DT 23 ? ? N1 A DT 23 ? ? 114.17 108.30 5.87 0.30 N 36 1 C6 A DT 23 ? ? C5 A DT 23 ? ? C7 A DT 23 ? ? 119.27 122.90 -3.63 0.60 N 37 2 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 117.66 108.30 9.36 0.30 N 38 2 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.00 108.30 3.70 0.30 N 39 2 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.50 108.30 3.20 0.30 N 40 2 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.16 122.90 -3.74 0.60 N 41 2 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.16 117.00 -3.84 0.50 N 42 2 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.57 117.70 3.87 0.50 N 43 2 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 111.38 118.60 -7.22 0.60 N 44 2 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 113.59 108.30 5.29 0.30 N 45 2 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 112.84 108.30 4.54 0.30 N 46 2 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 111.44 108.30 3.14 0.30 N 47 2 N3 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 117.11 121.90 -4.79 0.70 N 48 2 "O4'" A DA 10 ? ? "C1'" A DA 10 ? ? N9 A DA 10 ? ? 110.28 108.30 1.98 0.30 N 49 2 C4 A DA 10 ? ? C5 A DA 10 ? ? C6 A DA 10 ? ? 113.75 117.00 -3.25 0.50 N 50 2 C5 A DA 10 ? ? C6 A DA 10 ? ? N1 A DA 10 ? ? 121.54 117.70 3.84 0.50 N 51 2 N1 A DA 10 ? ? C6 A DA 10 ? ? N6 A DA 10 ? ? 113.14 118.60 -5.46 0.60 N 52 2 "C5'" A DG 13 ? ? "C4'" A DG 13 ? ? "O4'" A DG 13 ? ? 116.87 109.80 7.07 1.10 N 53 2 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 113.61 108.30 5.31 0.30 N 54 2 "O4'" A DA 15 ? ? "C1'" A DA 15 ? ? N9 A DA 15 ? ? 111.63 108.30 3.33 0.30 N 55 2 C4 A DA 15 ? ? C5 A DA 15 ? ? C6 A DA 15 ? ? 113.71 117.00 -3.29 0.50 N 56 2 C5 A DA 15 ? ? C6 A DA 15 ? ? N1 A DA 15 ? ? 121.72 117.70 4.02 0.50 N 57 2 N1 A DA 15 ? ? C6 A DA 15 ? ? N6 A DA 15 ? ? 113.02 118.60 -5.58 0.60 N 58 2 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 111.13 108.30 2.83 0.30 N 59 2 N3 A DC 16 ? ? C2 A DC 16 ? ? O2 A DC 16 ? ? 117.30 121.90 -4.60 0.70 N 60 2 "O4'" A DA 17 ? ? "C1'" A DA 17 ? ? N9 A DA 17 ? ? 111.41 108.30 3.11 0.30 N 61 2 C4 A DA 17 ? ? C5 A DA 17 ? ? C6 A DA 17 ? ? 113.76 117.00 -3.24 0.50 N 62 2 C5 A DA 17 ? ? C6 A DA 17 ? ? N1 A DA 17 ? ? 121.55 117.70 3.85 0.50 N 63 2 N1 A DA 17 ? ? C6 A DA 17 ? ? N6 A DA 17 ? ? 112.78 118.60 -5.82 0.60 N 64 2 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 111.65 108.30 3.35 0.30 N 65 2 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 117.17 121.90 -4.73 0.70 N 66 2 C4 A DA 19 ? ? C5 A DA 19 ? ? C6 A DA 19 ? ? 113.98 117.00 -3.02 0.50 N 67 2 C5 A DA 19 ? ? C6 A DA 19 ? ? N1 A DA 19 ? ? 121.24 117.70 3.54 0.50 N 68 2 N1 A DA 19 ? ? C6 A DA 19 ? ? N6 A DA 19 ? ? 113.30 118.60 -5.30 0.60 N 69 2 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 111.91 108.30 3.61 0.30 N 70 2 "O4'" A DT 23 ? ? "C1'" A DT 23 ? ? N1 A DT 23 ? ? 110.94 108.30 2.64 0.30 N 71 2 C6 A DT 23 ? ? C5 A DT 23 ? ? C7 A DT 23 ? ? 119.28 122.90 -3.62 0.60 N 72 3 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 114.10 108.30 5.80 0.30 N 73 3 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 110.83 108.30 2.53 0.30 N 74 3 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.72 108.30 2.42 0.30 N 75 3 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.44 108.30 3.14 0.30 N 76 3 "O4'" A DA 5 ? ? "C1'" A DA 5 ? ? N9 A DA 5 ? ? 110.45 108.30 2.15 0.30 N 77 3 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.10 117.00 -3.90 0.50 N 78 3 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.67 117.70 3.97 0.50 N 79 3 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 111.26 118.60 -7.34 0.60 N 80 3 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 114.85 108.30 6.55 0.30 N 81 3 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 110.37 108.30 2.07 0.30 N 82 3 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 113.28 108.30 4.98 0.30 N 83 3 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 111.15 108.30 2.85 0.30 N 84 3 N3 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 117.32 121.90 -4.58 0.70 N 85 3 C4 A DA 10 ? ? C5 A DA 10 ? ? C6 A DA 10 ? ? 113.97 117.00 -3.03 0.50 N 86 3 C5 A DA 10 ? ? C6 A DA 10 ? ? N1 A DA 10 ? ? 121.29 117.70 3.59 0.50 N 87 3 N1 A DA 10 ? ? C6 A DA 10 ? ? N6 A DA 10 ? ? 113.48 118.60 -5.12 0.60 N 88 3 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 110.21 108.30 1.91 0.30 N 89 3 "O4'" A DA 15 ? ? "C1'" A DA 15 ? ? N9 A DA 15 ? ? 112.67 108.30 4.37 0.30 N 90 3 C4 A DA 15 ? ? C5 A DA 15 ? ? C6 A DA 15 ? ? 113.84 117.00 -3.16 0.50 N 91 3 C5 A DA 15 ? ? C6 A DA 15 ? ? N1 A DA 15 ? ? 122.18 117.70 4.48 0.50 N 92 3 N1 A DA 15 ? ? C6 A DA 15 ? ? N6 A DA 15 ? ? 114.07 118.60 -4.53 0.60 N 93 3 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 112.71 108.30 4.41 0.30 N 94 3 N3 A DC 16 ? ? C2 A DC 16 ? ? O2 A DC 16 ? ? 117.24 121.90 -4.66 0.70 N 95 3 C4 A DA 17 ? ? C5 A DA 17 ? ? C6 A DA 17 ? ? 113.74 117.00 -3.26 0.50 N 96 3 C5 A DA 17 ? ? C6 A DA 17 ? ? N1 A DA 17 ? ? 121.67 117.70 3.97 0.50 N 97 3 N1 A DA 17 ? ? C6 A DA 17 ? ? N6 A DA 17 ? ? 113.06 118.60 -5.54 0.60 N 98 3 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 117.28 121.90 -4.62 0.70 N 99 3 C4 A DA 19 ? ? C5 A DA 19 ? ? C6 A DA 19 ? ? 113.93 117.00 -3.07 0.50 N 100 3 C5 A DA 19 ? ? C6 A DA 19 ? ? N1 A DA 19 ? ? 121.34 117.70 3.64 0.50 N 101 3 N1 A DA 19 ? ? C6 A DA 19 ? ? N6 A DA 19 ? ? 113.26 118.60 -5.34 0.60 N 102 3 "O4'" A DG 22 ? ? "C1'" A DG 22 ? ? N9 A DG 22 ? ? 112.06 108.30 3.76 0.30 N 103 3 "O4'" A DT 23 ? ? "C1'" A DT 23 ? ? N1 A DT 23 ? ? 114.11 108.30 5.81 0.30 N 104 3 C6 A DT 23 ? ? C5 A DT 23 ? ? C7 A DT 23 ? ? 119.25 122.90 -3.65 0.60 N 105 4 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 114.01 108.30 5.71 0.30 N 106 4 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 111.45 108.30 3.15 0.30 N 107 4 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.96 108.30 3.66 0.30 N 108 4 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.41 108.30 3.11 0.30 N 109 4 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.21 122.90 -3.69 0.60 N 110 4 "O4'" A DA 5 ? ? "C1'" A DA 5 ? ? N9 A DA 5 ? ? 111.23 108.30 2.93 0.30 N 111 4 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.53 117.00 -3.47 0.50 N 112 4 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.10 117.70 3.40 0.50 N 113 4 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 113.58 118.60 -5.02 0.60 N 114 4 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 113.98 108.30 5.68 0.30 N 115 4 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 110.17 108.30 1.87 0.30 N 116 4 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 112.55 108.30 4.25 0.30 N 117 4 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 110.53 108.30 2.23 0.30 N 118 4 N3 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 117.29 121.90 -4.61 0.70 N 119 4 C4 A DA 10 ? ? C5 A DA 10 ? ? C6 A DA 10 ? ? 113.99 117.00 -3.01 0.50 N 120 4 C5 A DA 10 ? ? C6 A DA 10 ? ? N1 A DA 10 ? ? 121.30 117.70 3.60 0.50 N 121 4 N1 A DA 10 ? ? C6 A DA 10 ? ? N6 A DA 10 ? ? 113.45 118.60 -5.15 0.60 N 122 4 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 110.65 108.30 2.35 0.30 N 123 4 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 111.12 108.30 2.82 0.30 N 124 4 "O4'" A DA 15 ? ? "C1'" A DA 15 ? ? N9 A DA 15 ? ? 113.39 108.30 5.09 0.30 N 125 4 C4 A DA 15 ? ? C5 A DA 15 ? ? C6 A DA 15 ? ? 113.94 117.00 -3.06 0.50 N 126 4 C5 A DA 15 ? ? C6 A DA 15 ? ? N1 A DA 15 ? ? 122.11 117.70 4.41 0.50 N 127 4 N1 A DA 15 ? ? C6 A DA 15 ? ? N6 A DA 15 ? ? 113.76 118.60 -4.84 0.60 N 128 4 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 111.75 108.30 3.45 0.30 N 129 4 N3 A DC 16 ? ? C2 A DC 16 ? ? O2 A DC 16 ? ? 117.07 121.90 -4.83 0.70 N 130 4 C4 A DA 17 ? ? C5 A DA 17 ? ? C6 A DA 17 ? ? 113.60 117.00 -3.40 0.50 N 131 4 C5 A DA 17 ? ? C6 A DA 17 ? ? N1 A DA 17 ? ? 121.52 117.70 3.82 0.50 N 132 4 N1 A DA 17 ? ? C6 A DA 17 ? ? N6 A DA 17 ? ? 112.96 118.60 -5.64 0.60 N 133 4 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 111.01 108.30 2.71 0.30 N 134 4 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 117.29 121.90 -4.61 0.70 N 135 4 C4 A DA 19 ? ? C5 A DA 19 ? ? C6 A DA 19 ? ? 113.66 117.00 -3.34 0.50 N 136 4 C5 A DA 19 ? ? C6 A DA 19 ? ? N1 A DA 19 ? ? 121.09 117.70 3.39 0.50 N 137 4 N1 A DA 19 ? ? C6 A DA 19 ? ? N6 A DA 19 ? ? 112.73 118.60 -5.87 0.60 N 138 4 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 116.99 108.30 8.69 0.30 N 139 4 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 112.87 108.30 4.57 0.30 N 140 4 "O4'" A DG 22 ? ? "C1'" A DG 22 ? ? N9 A DG 22 ? ? 111.49 108.30 3.19 0.30 N 141 4 "O4'" A DT 23 ? ? "C1'" A DT 23 ? ? N1 A DT 23 ? ? 114.16 108.30 5.86 0.30 N 142 4 C6 A DT 23 ? ? C5 A DT 23 ? ? C7 A DT 23 ? ? 119.24 122.90 -3.66 0.60 N 143 5 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 114.58 108.30 6.28 0.30 N 144 5 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 111.73 108.30 3.43 0.30 N 145 5 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 112.06 108.30 3.76 0.30 N 146 5 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.62 108.30 3.32 0.30 N 147 5 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.24 122.90 -3.66 0.60 N 148 5 "O4'" A DA 5 ? ? "C1'" A DA 5 ? ? N9 A DA 5 ? ? 110.73 108.30 2.43 0.30 N 149 5 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.53 117.00 -3.47 0.50 N 150 5 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.12 117.70 3.42 0.50 N 151 5 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 113.59 118.60 -5.01 0.60 N 152 5 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 114.15 108.30 5.85 0.30 N 153 5 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 112.69 108.30 4.39 0.30 N 154 5 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 110.73 108.30 2.43 0.30 N 155 5 N3 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 117.19 121.90 -4.71 0.70 N 156 5 C4 A DA 10 ? ? C5 A DA 10 ? ? C6 A DA 10 ? ? 113.96 117.00 -3.04 0.50 N 157 5 C5 A DA 10 ? ? C6 A DA 10 ? ? N1 A DA 10 ? ? 121.33 117.70 3.63 0.50 N 158 5 N1 A DA 10 ? ? C6 A DA 10 ? ? N6 A DA 10 ? ? 113.44 118.60 -5.16 0.60 N 159 5 "C5'" A DG 13 ? ? "C4'" A DG 13 ? ? "O4'" A DG 13 ? ? 116.60 109.80 6.80 1.10 N 160 5 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 111.77 108.30 3.47 0.30 N 161 5 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 110.39 108.30 2.09 0.30 N 162 5 "O4'" A DA 15 ? ? "C1'" A DA 15 ? ? N9 A DA 15 ? ? 111.47 108.30 3.17 0.30 N 163 5 C4 A DA 15 ? ? C5 A DA 15 ? ? C6 A DA 15 ? ? 113.95 117.00 -3.05 0.50 N 164 5 C5 A DA 15 ? ? C6 A DA 15 ? ? N1 A DA 15 ? ? 121.60 117.70 3.90 0.50 N 165 5 N1 A DA 15 ? ? C6 A DA 15 ? ? N6 A DA 15 ? ? 113.88 118.60 -4.72 0.60 N 166 5 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 111.91 108.30 3.61 0.30 N 167 5 N3 A DC 16 ? ? C2 A DC 16 ? ? O2 A DC 16 ? ? 117.24 121.90 -4.66 0.70 N 168 5 "O4'" A DA 17 ? ? "C1'" A DA 17 ? ? N9 A DA 17 ? ? 113.29 108.30 4.99 0.30 N 169 5 C4 A DA 17 ? ? C5 A DA 17 ? ? C6 A DA 17 ? ? 113.66 117.00 -3.34 0.50 N 170 5 C5 A DA 17 ? ? C6 A DA 17 ? ? N1 A DA 17 ? ? 121.47 117.70 3.77 0.50 N 171 5 N1 A DA 17 ? ? C6 A DA 17 ? ? N6 A DA 17 ? ? 113.02 118.60 -5.58 0.60 N 172 5 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 110.61 108.30 2.31 0.30 N 173 5 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 117.41 121.90 -4.49 0.70 N 174 5 C4 A DA 19 ? ? C5 A DA 19 ? ? C6 A DA 19 ? ? 113.47 117.00 -3.53 0.50 N 175 5 C5 A DA 19 ? ? C6 A DA 19 ? ? N1 A DA 19 ? ? 121.28 117.70 3.58 0.50 N 176 5 N1 A DA 19 ? ? C6 A DA 19 ? ? N6 A DA 19 ? ? 112.62 118.60 -5.98 0.60 N 177 5 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 116.35 108.30 8.05 0.30 N 178 5 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 110.41 108.30 2.11 0.30 N 179 5 "O4'" A DG 22 ? ? "C1'" A DG 22 ? ? N9 A DG 22 ? ? 111.35 108.30 3.05 0.30 N 180 5 "O4'" A DT 23 ? ? "C1'" A DT 23 ? ? N1 A DT 23 ? ? 114.31 108.30 6.01 0.30 N 181 5 C6 A DT 23 ? ? C5 A DT 23 ? ? C7 A DT 23 ? ? 119.27 122.90 -3.63 0.60 N 182 6 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 114.28 108.30 5.98 0.30 N 183 6 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 110.65 108.30 2.35 0.30 N 184 6 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DG 3 ? ? 126.90 119.70 7.20 1.20 Y 185 6 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.80 108.30 2.50 0.30 N 186 6 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.67 117.00 -3.33 0.50 N 187 6 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.51 117.70 3.81 0.50 N 188 6 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 113.29 118.60 -5.31 0.60 N 189 6 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 114.70 108.30 6.40 0.30 N 190 6 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 110.89 108.30 2.59 0.30 N 191 6 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 113.37 108.30 5.07 0.30 N 192 6 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 111.98 108.30 3.68 0.30 N 193 6 N3 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 117.32 121.90 -4.58 0.70 N 194 6 C4 A DA 10 ? ? C5 A DA 10 ? ? C6 A DA 10 ? ? 113.87 117.00 -3.13 0.50 N 195 6 C5 A DA 10 ? ? C6 A DA 10 ? ? N1 A DA 10 ? ? 121.34 117.70 3.64 0.50 N 196 6 N1 A DA 10 ? ? C6 A DA 10 ? ? N6 A DA 10 ? ? 113.20 118.60 -5.40 0.60 N 197 6 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 110.38 108.30 2.08 0.30 N 198 6 "C5'" A DG 13 ? ? "C4'" A DG 13 ? ? "O4'" A DG 13 ? ? 116.48 109.80 6.68 1.10 N 199 6 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 114.11 108.30 5.81 0.30 N 200 6 "O4'" A DA 15 ? ? "C1'" A DA 15 ? ? N9 A DA 15 ? ? 111.51 108.30 3.21 0.30 N 201 6 C4 A DA 15 ? ? C5 A DA 15 ? ? C6 A DA 15 ? ? 113.87 117.00 -3.13 0.50 N 202 6 C5 A DA 15 ? ? C6 A DA 15 ? ? N1 A DA 15 ? ? 121.78 117.70 4.08 0.50 N 203 6 N1 A DA 15 ? ? C6 A DA 15 ? ? N6 A DA 15 ? ? 113.53 118.60 -5.07 0.60 N 204 6 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 111.23 108.30 2.93 0.30 N 205 6 N3 A DC 16 ? ? C2 A DC 16 ? ? O2 A DC 16 ? ? 117.15 121.90 -4.75 0.70 N 206 6 C4 A DA 17 ? ? C5 A DA 17 ? ? C6 A DA 17 ? ? 113.56 117.00 -3.44 0.50 N 207 6 C5 A DA 17 ? ? C6 A DA 17 ? ? N1 A DA 17 ? ? 121.37 117.70 3.67 0.50 N 208 6 N1 A DA 17 ? ? C6 A DA 17 ? ? N6 A DA 17 ? ? 113.21 118.60 -5.39 0.60 N 209 6 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 113.65 108.30 5.35 0.30 N 210 6 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 117.11 121.90 -4.79 0.70 N 211 6 C4 A DA 19 ? ? C5 A DA 19 ? ? C6 A DA 19 ? ? 113.89 117.00 -3.11 0.50 N 212 6 C5 A DA 19 ? ? C6 A DA 19 ? ? N1 A DA 19 ? ? 121.69 117.70 3.99 0.50 N 213 6 N1 A DA 19 ? ? C6 A DA 19 ? ? N6 A DA 19 ? ? 113.33 118.60 -5.27 0.60 N 214 6 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 111.45 108.30 3.15 0.30 N 215 6 "O4'" A DG 21 ? ? "C4'" A DG 21 ? ? "C3'" A DG 21 ? ? 109.74 106.00 3.74 0.60 N 216 6 "O4'" A DG 22 ? ? "C1'" A DG 22 ? ? N9 A DG 22 ? ? 110.48 108.30 2.18 0.30 N 217 6 "O4'" A DT 23 ? ? "C1'" A DT 23 ? ? N1 A DT 23 ? ? 113.92 108.30 5.62 0.30 N 218 6 C6 A DT 23 ? ? C5 A DT 23 ? ? C7 A DT 23 ? ? 119.24 122.90 -3.66 0.60 N 219 7 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 112.81 108.30 4.51 0.30 N 220 7 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 110.75 108.30 2.45 0.30 N 221 7 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.66 108.30 2.36 0.30 N 222 7 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.63 108.30 3.33 0.30 N 223 7 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.26 122.90 -3.64 0.60 N 224 7 "O4'" A DA 5 ? ? "C1'" A DA 5 ? ? N9 A DA 5 ? ? 110.55 108.30 2.25 0.30 N 225 7 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.15 117.00 -3.85 0.50 N 226 7 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.68 117.70 3.98 0.50 N 227 7 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 111.25 118.60 -7.35 0.60 N 228 7 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 113.94 108.30 5.64 0.30 N 229 7 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 110.41 108.30 2.11 0.30 N 230 7 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 112.95 108.30 4.65 0.30 N 231 7 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 110.99 108.30 2.69 0.30 N 232 7 N3 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 117.33 121.90 -4.57 0.70 N 233 7 C4 A DA 10 ? ? C5 A DA 10 ? ? C6 A DA 10 ? ? 113.91 117.00 -3.09 0.50 N 234 7 C5 A DA 10 ? ? C6 A DA 10 ? ? N1 A DA 10 ? ? 121.32 117.70 3.62 0.50 N 235 7 N1 A DA 10 ? ? C6 A DA 10 ? ? N6 A DA 10 ? ? 113.37 118.60 -5.23 0.60 N 236 7 "C5'" A DG 13 ? ? "C4'" A DG 13 ? ? "O4'" A DG 13 ? ? 116.49 109.80 6.69 1.10 N 237 7 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 114.38 108.30 6.08 0.30 N 238 7 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 110.31 108.30 2.01 0.30 N 239 7 "O4'" A DA 15 ? ? "C1'" A DA 15 ? ? N9 A DA 15 ? ? 111.46 108.30 3.16 0.30 N 240 7 C4 A DA 15 ? ? C5 A DA 15 ? ? C6 A DA 15 ? ? 113.87 117.00 -3.13 0.50 N 241 7 C5 A DA 15 ? ? C6 A DA 15 ? ? N1 A DA 15 ? ? 121.78 117.70 4.08 0.50 N 242 7 N1 A DA 15 ? ? C6 A DA 15 ? ? N6 A DA 15 ? ? 113.21 118.60 -5.39 0.60 N 243 7 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 110.42 108.30 2.12 0.30 N 244 7 N3 A DC 16 ? ? C2 A DC 16 ? ? O2 A DC 16 ? ? 117.12 121.90 -4.78 0.70 N 245 7 C4 A DA 17 ? ? C5 A DA 17 ? ? C6 A DA 17 ? ? 113.63 117.00 -3.37 0.50 N 246 7 C5 A DA 17 ? ? C6 A DA 17 ? ? N1 A DA 17 ? ? 121.45 117.70 3.75 0.50 N 247 7 N1 A DA 17 ? ? C6 A DA 17 ? ? N6 A DA 17 ? ? 113.06 118.60 -5.54 0.60 N 248 7 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 112.80 108.30 4.50 0.30 N 249 7 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 117.07 121.90 -4.83 0.70 N 250 7 C4 A DA 19 ? ? C5 A DA 19 ? ? C6 A DA 19 ? ? 113.87 117.00 -3.13 0.50 N 251 7 C5 A DA 19 ? ? C6 A DA 19 ? ? N1 A DA 19 ? ? 121.29 117.70 3.59 0.50 N 252 7 N1 A DA 19 ? ? C6 A DA 19 ? ? N6 A DA 19 ? ? 112.59 118.60 -6.01 0.60 N 253 7 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 111.21 108.30 2.91 0.30 N 254 7 "O4'" A DG 22 ? ? "C1'" A DG 22 ? ? N9 A DG 22 ? ? 110.44 108.30 2.14 0.30 N 255 7 "O4'" A DT 23 ? ? "C1'" A DT 23 ? ? N1 A DT 23 ? ? 113.99 108.30 5.69 0.30 N 256 7 C6 A DT 23 ? ? C5 A DT 23 ? ? C7 A DT 23 ? ? 119.24 122.90 -3.66 0.60 N 257 8 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 113.20 108.30 4.90 0.30 N 258 8 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 111.06 108.30 2.76 0.30 N 259 8 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.71 108.30 2.41 0.30 N 260 8 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.46 108.30 3.16 0.30 N 261 8 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.24 122.90 -3.66 0.60 N 262 8 "O4'" A DA 5 ? ? "C1'" A DA 5 ? ? N9 A DA 5 ? ? 110.16 108.30 1.86 0.30 N 263 8 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 112.91 117.00 -4.09 0.50 N 264 8 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.64 117.70 3.94 0.50 N 265 8 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 110.77 118.60 -7.83 0.60 N 266 8 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 114.40 108.30 6.10 0.30 N 267 8 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 112.79 108.30 4.49 0.30 N 268 8 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 111.84 108.30 3.54 0.30 N 269 8 N3 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 116.98 121.90 -4.92 0.70 N 270 8 C4 A DA 10 ? ? C5 A DA 10 ? ? C6 A DA 10 ? ? 113.87 117.00 -3.13 0.50 N 271 8 C5 A DA 10 ? ? C6 A DA 10 ? ? N1 A DA 10 ? ? 121.51 117.70 3.81 0.50 N 272 8 N1 A DA 10 ? ? C6 A DA 10 ? ? N6 A DA 10 ? ? 112.97 118.60 -5.63 0.60 N 273 8 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 111.15 108.30 2.85 0.30 N 274 8 "O4'" A DA 15 ? ? "C1'" A DA 15 ? ? N9 A DA 15 ? ? 112.00 108.30 3.70 0.30 N 275 8 C5 A DA 15 ? ? C6 A DA 15 ? ? N1 A DA 15 ? ? 121.73 117.70 4.03 0.50 N 276 8 N1 A DA 15 ? ? C6 A DA 15 ? ? N6 A DA 15 ? ? 114.01 118.60 -4.59 0.60 N 277 8 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 110.96 108.30 2.66 0.30 N 278 8 N3 A DC 16 ? ? C2 A DC 16 ? ? O2 A DC 16 ? ? 117.36 121.90 -4.54 0.70 N 279 8 "O4'" A DA 17 ? ? "C1'" A DA 17 ? ? N9 A DA 17 ? ? 112.00 108.30 3.70 0.30 N 280 8 C4 A DA 17 ? ? C5 A DA 17 ? ? C6 A DA 17 ? ? 113.94 117.00 -3.06 0.50 N 281 8 C5 A DA 17 ? ? C6 A DA 17 ? ? N1 A DA 17 ? ? 121.71 117.70 4.01 0.50 N 282 8 N1 A DA 17 ? ? C6 A DA 17 ? ? N6 A DA 17 ? ? 112.99 118.60 -5.61 0.60 N 283 8 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 113.44 108.30 5.14 0.30 N 284 8 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 117.09 121.90 -4.81 0.70 N 285 8 C4 A DA 19 ? ? C5 A DA 19 ? ? C6 A DA 19 ? ? 113.92 117.00 -3.08 0.50 N 286 8 C5 A DA 19 ? ? C6 A DA 19 ? ? N1 A DA 19 ? ? 121.28 117.70 3.58 0.50 N 287 8 N1 A DA 19 ? ? C6 A DA 19 ? ? N6 A DA 19 ? ? 113.18 118.60 -5.42 0.60 N 288 8 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 110.29 108.30 1.99 0.30 N 289 8 "O4'" A DT 23 ? ? "C1'" A DT 23 ? ? N1 A DT 23 ? ? 110.91 108.30 2.61 0.30 N 290 9 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 114.31 108.30 6.01 0.30 N 291 9 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 111.48 108.30 3.18 0.30 N 292 9 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.30 108.30 2.00 0.30 N 293 9 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.18 122.90 -3.72 0.60 N 294 9 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.48 117.00 -3.52 0.50 N 295 9 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.53 117.70 3.83 0.50 N 296 9 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 112.72 118.60 -5.88 0.60 N 297 9 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 115.14 108.30 6.84 0.30 N 298 9 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.40 108.30 3.10 0.30 N 299 9 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 112.69 108.30 4.39 0.30 N 300 9 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 111.39 108.30 3.09 0.30 N 301 9 N3 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 117.25 121.90 -4.65 0.70 N 302 9 C5 A DA 10 ? ? C6 A DA 10 ? ? N1 A DA 10 ? ? 121.25 117.70 3.55 0.50 N 303 9 N1 A DA 10 ? ? C6 A DA 10 ? ? N6 A DA 10 ? ? 113.60 118.60 -5.00 0.60 N 304 9 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 110.80 108.30 2.50 0.30 N 305 9 "C5'" A DG 13 ? ? "C4'" A DG 13 ? ? "O4'" A DG 13 ? ? 116.72 109.80 6.92 1.10 N 306 9 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 111.97 108.30 3.67 0.30 N 307 9 "O4'" A DA 15 ? ? "C1'" A DA 15 ? ? N9 A DA 15 ? ? 112.68 108.30 4.38 0.30 N 308 9 C4 A DA 15 ? ? C5 A DA 15 ? ? C6 A DA 15 ? ? 113.96 117.00 -3.04 0.50 N 309 9 C5 A DA 15 ? ? C6 A DA 15 ? ? N1 A DA 15 ? ? 121.55 117.70 3.85 0.50 N 310 9 N1 A DA 15 ? ? C6 A DA 15 ? ? N6 A DA 15 ? ? 113.75 118.60 -4.85 0.60 N 311 9 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 112.81 108.30 4.51 0.30 N 312 9 N3 A DC 16 ? ? C2 A DC 16 ? ? O2 A DC 16 ? ? 117.63 121.90 -4.27 0.70 N 313 9 C4 A DA 17 ? ? C5 A DA 17 ? ? C6 A DA 17 ? ? 113.89 117.00 -3.11 0.50 N 314 9 C5 A DA 17 ? ? C6 A DA 17 ? ? N1 A DA 17 ? ? 121.71 117.70 4.01 0.50 N 315 9 N1 A DA 17 ? ? C6 A DA 17 ? ? N6 A DA 17 ? ? 113.02 118.60 -5.58 0.60 N 316 9 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 113.45 108.30 5.15 0.30 N 317 9 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 117.04 121.90 -4.86 0.70 N 318 9 C4 A DA 19 ? ? C5 A DA 19 ? ? C6 A DA 19 ? ? 113.92 117.00 -3.08 0.50 N 319 9 C5 A DA 19 ? ? C6 A DA 19 ? ? N1 A DA 19 ? ? 121.65 117.70 3.95 0.50 N 320 9 N1 A DA 19 ? ? C6 A DA 19 ? ? N6 A DA 19 ? ? 113.52 118.60 -5.08 0.60 N 321 9 "O4'" A DG 22 ? ? "C1'" A DG 22 ? ? N9 A DG 22 ? ? 110.46 108.30 2.16 0.30 N 322 9 "O4'" A DT 23 ? ? "C1'" A DT 23 ? ? N1 A DT 23 ? ? 114.27 108.30 5.97 0.30 N 323 10 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 113.02 108.30 4.72 0.30 N 324 10 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 111.07 108.30 2.77 0.30 N 325 10 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.62 108.30 2.32 0.30 N 326 10 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.73 108.30 3.43 0.30 N 327 10 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.22 122.90 -3.68 0.60 N 328 10 "O4'" A DA 5 ? ? "C1'" A DA 5 ? ? N9 A DA 5 ? ? 110.24 108.30 1.94 0.30 N 329 10 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.10 117.00 -3.90 0.50 N 330 10 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.61 117.70 3.91 0.50 N 331 10 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 111.24 118.60 -7.36 0.60 N 332 10 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 114.28 108.30 5.98 0.30 N 333 10 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 112.92 108.30 4.62 0.30 N 334 10 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 111.76 108.30 3.46 0.30 N 335 10 N3 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 117.07 121.90 -4.83 0.70 N 336 10 C4 A DA 10 ? ? C5 A DA 10 ? ? C6 A DA 10 ? ? 113.72 117.00 -3.28 0.50 N 337 10 C5 A DA 10 ? ? C6 A DA 10 ? ? N1 A DA 10 ? ? 121.52 117.70 3.82 0.50 N 338 10 N1 A DA 10 ? ? C6 A DA 10 ? ? N6 A DA 10 ? ? 113.17 118.60 -5.43 0.60 N 339 10 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 112.75 108.30 4.45 0.30 N 340 10 C4 A DA 15 ? ? C5 A DA 15 ? ? C6 A DA 15 ? ? 113.87 117.00 -3.13 0.50 N 341 10 C5 A DA 15 ? ? C6 A DA 15 ? ? N1 A DA 15 ? ? 121.71 117.70 4.01 0.50 N 342 10 N1 A DA 15 ? ? C6 A DA 15 ? ? N6 A DA 15 ? ? 113.69 118.60 -4.91 0.60 N 343 10 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 112.03 108.30 3.73 0.30 N 344 10 N3 A DC 16 ? ? C2 A DC 16 ? ? O2 A DC 16 ? ? 117.34 121.90 -4.56 0.70 N 345 10 C4 A DA 17 ? ? C5 A DA 17 ? ? C6 A DA 17 ? ? 113.85 117.00 -3.15 0.50 N 346 10 C5 A DA 17 ? ? C6 A DA 17 ? ? N1 A DA 17 ? ? 121.53 117.70 3.83 0.50 N 347 10 N1 A DA 17 ? ? C6 A DA 17 ? ? N6 A DA 17 ? ? 113.30 118.60 -5.30 0.60 N 348 10 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 113.11 108.30 4.81 0.30 N 349 10 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 117.09 121.90 -4.81 0.70 N 350 10 C4 A DA 19 ? ? C5 A DA 19 ? ? C6 A DA 19 ? ? 113.80 117.00 -3.20 0.50 N 351 10 C5 A DA 19 ? ? C6 A DA 19 ? ? N1 A DA 19 ? ? 121.32 117.70 3.62 0.50 N 352 10 N1 A DA 19 ? ? C6 A DA 19 ? ? N6 A DA 19 ? ? 112.88 118.60 -5.72 0.60 N 353 10 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 110.68 108.30 2.38 0.30 N 354 10 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 110.38 108.30 2.08 0.30 N 355 10 "O4'" A DT 23 ? ? "C1'" A DT 23 ? ? N1 A DT 23 ? ? 110.93 108.30 2.63 0.30 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DG A 1 ? ? 0.106 'SIDE CHAIN' 2 1 DT A 4 ? ? 0.061 'SIDE CHAIN' 3 1 DA A 5 ? ? 0.068 'SIDE CHAIN' 4 1 DG A 12 ? ? 0.064 'SIDE CHAIN' 5 1 DA A 19 ? ? 0.106 'SIDE CHAIN' 6 1 DG A 21 ? ? 0.094 'SIDE CHAIN' 7 2 DG A 1 ? ? 0.057 'SIDE CHAIN' 8 2 DT A 4 ? ? 0.063 'SIDE CHAIN' 9 2 DA A 5 ? ? 0.061 'SIDE CHAIN' 10 2 DG A 7 ? ? 0.059 'SIDE CHAIN' 11 2 DA A 10 ? ? 0.068 'SIDE CHAIN' 12 2 DG A 13 ? ? 0.062 'SIDE CHAIN' 13 2 DA A 19 ? ? 0.058 'SIDE CHAIN' 14 2 DG A 22 ? ? 0.061 'SIDE CHAIN' 15 3 DG A 2 ? ? 0.064 'SIDE CHAIN' 16 3 DG A 7 ? ? 0.052 'SIDE CHAIN' 17 3 DG A 14 ? ? 0.059 'SIDE CHAIN' 18 3 DC A 18 ? ? 0.084 'SIDE CHAIN' 19 3 DA A 19 ? ? 0.130 'SIDE CHAIN' 20 3 DG A 21 ? ? 0.055 'SIDE CHAIN' 21 4 DG A 1 ? ? 0.072 'SIDE CHAIN' 22 4 DG A 2 ? ? 0.054 'SIDE CHAIN' 23 4 DG A 7 ? ? 0.064 'SIDE CHAIN' 24 4 DG A 12 ? ? 0.057 'SIDE CHAIN' 25 4 DA A 15 ? ? 0.062 'SIDE CHAIN' 26 5 DG A 1 ? ? 0.060 'SIDE CHAIN' 27 5 DG A 2 ? ? 0.055 'SIDE CHAIN' 28 5 DG A 7 ? ? 0.075 'SIDE CHAIN' 29 5 DG A 12 ? ? 0.052 'SIDE CHAIN' 30 5 DA A 19 ? ? 0.058 'SIDE CHAIN' 31 6 DG A 1 ? ? 0.095 'SIDE CHAIN' 32 6 DG A 3 ? ? 0.058 'SIDE CHAIN' 33 6 DA A 5 ? ? 0.077 'SIDE CHAIN' 34 6 DA A 15 ? ? 0.077 'SIDE CHAIN' 35 6 DA A 19 ? ? 0.091 'SIDE CHAIN' 36 7 DG A 1 ? ? 0.067 'SIDE CHAIN' 37 7 DG A 13 ? ? 0.065 'SIDE CHAIN' 38 7 DA A 19 ? ? 0.090 'SIDE CHAIN' 39 7 DG A 21 ? ? 0.057 'SIDE CHAIN' 40 8 DG A 1 ? ? 0.099 'SIDE CHAIN' 41 8 DG A 7 ? ? 0.059 'SIDE CHAIN' 42 8 DA A 10 ? ? 0.054 'SIDE CHAIN' 43 8 DG A 14 ? ? 0.080 'SIDE CHAIN' 44 8 DA A 15 ? ? 0.060 'SIDE CHAIN' 45 8 DA A 19 ? ? 0.084 'SIDE CHAIN' 46 9 DG A 1 ? ? 0.103 'SIDE CHAIN' 47 9 DA A 5 ? ? 0.087 'SIDE CHAIN' 48 9 DA A 15 ? ? 0.070 'SIDE CHAIN' 49 9 DA A 19 ? ? 0.110 'SIDE CHAIN' 50 10 DG A 1 ? ? 0.080 'SIDE CHAIN' 51 10 DG A 7 ? ? 0.064 'SIDE CHAIN' 52 10 DA A 10 ? ? 0.062 'SIDE CHAIN' 53 10 DA A 19 ? ? 0.116 'SIDE CHAIN' # _pdbx_nmr_ensemble.entry_id 5O4D _pdbx_nmr_ensemble.conformers_calculated_total_number 1000 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with lowest energy and least restraint violations' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 5O4D _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 ;1.2 mM DNA (5'-D(*GP*GP*GP*TP*AP*GP*GP*GP*CP*AP*GP*GP*GP*GP*AP*CP*AP*CP*AP*GP*GP*GP*T)-3'), 10 mM potassium phosphate, 40 mM potassium chloride, 90% H2O/10% D2O ; '90% H2O/10% D2O' 'H2O sample' solution 'DNA was dissolved in solvent. Potassium phosphate and potassium chloride were added in steps to the final concentration.' 2 ;1.2 mM DNA (5'-D(*GP*GP*GP*TP*AP*GP*GP*GP*CP*AP*GP*GP*GP*GP*AP*CP*AP*CP*AP*GP*GP*GP*T)-3'), 10 mM potassium phosphate, 40 mM potassium chloride, 100% D2O ; '100% D2O' 'D2O sample' solution 'H2O was exchanged to D2O in several steps of repeated lyophilization and dissolution in D2O.' 3 ;0.9 mM 15N site-specifically labelled at 5% DNA (5'-D(*GP*GP*GP*TP*AP*GP*GP*GP*CP*AP*GP*GP*GP*GP*AP*CP*AP*CP*AP*GP*GP*GP*T)-3'), 10 mM potassium phosphate, 40 mM potassium chloride, 100% D2O ; '100% D2O' '15N sample' solution ;DNA was dissolved in H2O. Potassium phosphate and potassium chloride were added in steps to the final concentration. H2O was exchanged to D2O in several steps of repeated lyophilization and dissolution in D2O. ; # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 ;DNA (5'-D(*GP*GP*GP*TP*AP*GP*GP*GP*CP*AP*GP*GP*GP*GP*AP*CP*AP*CP*AP*GP*GP*GP*T)-3') ; 1.2 ? mM 'natural abundance' 1 'potassium phosphate' 10 ? mM 'natural abundance' 1 'potassium chloride' 40 ? mM 'natural abundance' 2 ;DNA (5'-D(*GP*GP*GP*TP*AP*GP*GP*GP*CP*AP*GP*GP*GP*GP*AP*CP*AP*CP*AP*GP*GP*GP*T)-3') ; 1.2 ? mM 'natural abundance' 2 'potassium phosphate' 10 ? mM 'natural abundance' 2 'potassium chloride' 40 ? mM 'natural abundance' 3 ;DNA (5'-D(*GP*GP*GP*TP*AP*GP*GP*GP*CP*AP*GP*GP*GP*GP*AP*CP*AP*CP*AP*GP*GP*GP*T)-3') ; 0.9 ? mM '15N site-specifically labelled at 5%' 3 'potassium phosphate' 10 ? mM 'natural abundance' 3 'potassium chloride' 40 ? mM 'natural abundance' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.8 _pdbx_nmr_exptl_sample_conditions.ionic_strength 50 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label conditions_1 _pdbx_nmr_exptl_sample_conditions.pH_err 0.05 _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err 1 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H NOESY' 1 isotropic 2 1 2 '2D 1H-1H NOESY' 1 isotropic 3 1 2 '2D 1H-1H TOCSY' 1 isotropic 4 1 2 '2D DQF-COSY' 1 isotropic 5 1 2 '2D HP COSY' 2 isotropic 6 1 3 '2D 1H-13C HSQC aromatic' 1 isotropic # _pdbx_nmr_refine.entry_id 5O4D _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 6 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 collection VnmrJ 3. Agilent 2 processing NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 3 'peak picking' Sparky 3.115 Goddard 4 'data analysis' Sparky 3.115 Goddard 5 'structure calculation' Amber 14 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' 6 refinement Amber 14 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' 7 'chemical shift assignment' Sparky 3.115 Goddard # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5O4D 'double helix' 5O4D 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 5 1_555 A DA 19 1_555 -1.829 -2.737 -2.379 -7.713 -22.769 28.122 1 A_DA5:DA19_A A 5 ? A 19 ? ? 3 1 A DG 2 1_555 A DG 12 1_555 -1.718 -3.414 -0.508 6.944 5.028 88.605 2 A_DG2:DG12_A A 2 ? A 12 ? 6 3 # _ndb_struct_na_base_pair_step.model_number 1 _ndb_struct_na_base_pair_step.i_label_asym_id_1 A _ndb_struct_na_base_pair_step.i_label_comp_id_1 DA _ndb_struct_na_base_pair_step.i_label_seq_id_1 5 _ndb_struct_na_base_pair_step.i_symmetry_1 1_555 _ndb_struct_na_base_pair_step.j_label_asym_id_1 A _ndb_struct_na_base_pair_step.j_label_comp_id_1 DA _ndb_struct_na_base_pair_step.j_label_seq_id_1 19 _ndb_struct_na_base_pair_step.j_symmetry_1 1_555 _ndb_struct_na_base_pair_step.i_label_asym_id_2 A _ndb_struct_na_base_pair_step.i_label_comp_id_2 DG _ndb_struct_na_base_pair_step.i_label_seq_id_2 2 _ndb_struct_na_base_pair_step.i_symmetry_2 1_555 _ndb_struct_na_base_pair_step.j_label_asym_id_2 A _ndb_struct_na_base_pair_step.j_label_comp_id_2 DG _ndb_struct_na_base_pair_step.j_label_seq_id_2 12 _ndb_struct_na_base_pair_step.j_symmetry_2 1_555 _ndb_struct_na_base_pair_step.shift 2.297 _ndb_struct_na_base_pair_step.slide -2.441 _ndb_struct_na_base_pair_step.rise 1.419 _ndb_struct_na_base_pair_step.tilt -74.882 _ndb_struct_na_base_pair_step.roll -125.965 _ndb_struct_na_base_pair_step.twist -140.121 _ndb_struct_na_base_pair_step.x_displacement 1.405 _ndb_struct_na_base_pair_step.y_displacement 1.048 _ndb_struct_na_base_pair_step.helical_rise 1.037 _ndb_struct_na_base_pair_step.inclination 63.800 _ndb_struct_na_base_pair_step.tip -37.927 _ndb_struct_na_base_pair_step.helical_twist -168.733 _ndb_struct_na_base_pair_step.step_number 1 _ndb_struct_na_base_pair_step.step_name AA_DA5DG2:DG12DA19_AA _ndb_struct_na_base_pair_step.i_auth_asym_id_1 A _ndb_struct_na_base_pair_step.i_auth_seq_id_1 5 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 ? _ndb_struct_na_base_pair_step.j_auth_asym_id_1 A _ndb_struct_na_base_pair_step.j_auth_seq_id_1 19 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 ? _ndb_struct_na_base_pair_step.i_auth_asym_id_2 A _ndb_struct_na_base_pair_step.i_auth_seq_id_2 2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 ? _ndb_struct_na_base_pair_step.j_auth_asym_id_2 A _ndb_struct_na_base_pair_step.j_auth_seq_id_2 12 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Slovenian Research Agency' Slovenia P1-242 1 'Slovenian Research Agency' Slovenia J1-6733 2 # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 VNMRS ? Varian 800 ? 2 DD2 ? Varian 600 ? # _atom_sites.entry_id 5O4D _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_