HEADER OXIDOREDUCTASE 07-JUN-17 5O6X TITLE 17BETA-HYDROXYSTEROID DEHYDROGENASE 14 VARIANT T205 IN COMPLEX WITH A TITLE 2 NON-STEROIDAL QUINOLINE BASED INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: 17-BETA-HYDROXYSTEROID DEHYDROGENASE 14; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 17-BETA-HSD 14,17-BETA-HYDROXYSTEROID DEHYDROGENASE DHRS10, COMPND 5 DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 10,RETINAL SHORT-CHAIN COMPND 6 DEHYDROGENASE/REDUCTASE RETSDR3,SHORT CHAIN DEHYDROGENASE/REDUCTASE COMPND 7 FAMILY 47C MEMBER 1; COMPND 8 EC: 1.1.1.-; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HSD17B14, DHRS10, SDR3, SDR47C1, UNQ502/PRO474; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: PLYSS KEYWDS NON-STEROIDAL INHIBITOR, 17BETA-HSD14, 2, 6-PYRIDINKETONE INHIBITORS, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR N.BERTOLETTI,F.BRAUN,A.HEINE,G.KLEBE,S.MARCHAIS-OBERWINKLER REVDAT 4 17-JAN-24 5O6X 1 HETSYN REVDAT 3 29-JUL-20 5O6X 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE REVDAT 2 13-JUN-18 5O6X 1 JRNL REVDAT 1 06-JUN-18 5O6X 0 JRNL AUTH F.BRAUN,N.BERTOLETTI,G.MOLLER,J.ADAMSKI,M.FROTSCHER, JRNL AUTH 2 N.GURAGOSSIAN,P.A.MADEIRA GIRIO,M.LE BORGNE,L.ETTOUATI, JRNL AUTH 3 P.FALSON,S.MULLER,G.VOLLMER,A.HEINE,G.KLEBE, JRNL AUTH 4 S.MARCHAIS-OBERWINKLER JRNL TITL STRUCTURE-BASED DESIGN AND PROFILING OF NOVEL 17 BETA-HSD14 JRNL TITL 2 INHIBITORS. JRNL REF EUR J MED CHEM V. 155 61 2018 JRNL REFN ISSN 1768-3254 JRNL PMID 29859505 JRNL DOI 10.1016/J.EJMECH.2018.05.029 REMARK 2 REMARK 2 RESOLUTION. 1.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.34 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 117832 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.119 REMARK 3 R VALUE (WORKING SET) : 0.118 REMARK 3 FREE R VALUE : 0.138 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 5885 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.3624 - 4.1939 1.00 3745 195 0.1445 0.1546 REMARK 3 2 4.1939 - 3.3291 1.00 3741 198 0.1286 0.1469 REMARK 3 3 3.3291 - 2.9084 1.00 3727 197 0.1341 0.1513 REMARK 3 4 2.9084 - 2.6425 1.00 3729 189 0.1216 0.1232 REMARK 3 5 2.6425 - 2.4531 1.00 3730 201 0.1139 0.1427 REMARK 3 6 2.4531 - 2.3085 1.00 3736 201 0.1087 0.1351 REMARK 3 7 2.3085 - 2.1929 1.00 3731 194 0.1076 0.1265 REMARK 3 8 2.1929 - 2.0974 1.00 3716 200 0.1037 0.1206 REMARK 3 9 2.0974 - 2.0167 1.00 3709 189 0.1075 0.1321 REMARK 3 10 2.0167 - 1.9471 1.00 3749 200 0.1064 0.1262 REMARK 3 11 1.9471 - 1.8862 1.00 3742 200 0.1038 0.1172 REMARK 3 12 1.8862 - 1.8323 1.00 3743 197 0.1004 0.1447 REMARK 3 13 1.8323 - 1.7840 1.00 3689 194 0.0961 0.1248 REMARK 3 14 1.7840 - 1.7405 1.00 3767 196 0.0975 0.1069 REMARK 3 15 1.7405 - 1.7009 1.00 3750 198 0.0957 0.1213 REMARK 3 16 1.7009 - 1.6647 0.99 3683 197 0.0978 0.1250 REMARK 3 17 1.6647 - 1.6314 1.00 3727 195 0.0998 0.1464 REMARK 3 18 1.6314 - 1.6007 1.00 3714 190 0.1007 0.1319 REMARK 3 19 1.6007 - 1.5721 1.00 3715 192 0.0963 0.1314 REMARK 3 20 1.5721 - 1.5454 1.00 3754 196 0.0989 0.1154 REMARK 3 21 1.5454 - 1.5205 1.00 3733 197 0.1011 0.1305 REMARK 3 22 1.5205 - 1.4971 1.00 3731 194 0.1057 0.1347 REMARK 3 23 1.4971 - 1.4751 1.00 3763 200 0.1140 0.1404 REMARK 3 24 1.4751 - 1.4543 1.00 3740 195 0.1190 0.1298 REMARK 3 25 1.4543 - 1.4346 1.00 3754 195 0.1334 0.1589 REMARK 3 26 1.4346 - 1.4160 0.99 3681 198 0.1500 0.1751 REMARK 3 27 1.4160 - 1.3983 1.00 3757 194 0.1472 0.1740 REMARK 3 28 1.3983 - 1.3815 1.00 3656 195 0.1531 0.1800 REMARK 3 29 1.3815 - 1.3654 1.00 3793 199 0.1574 0.2023 REMARK 3 30 1.3654 - 1.3501 1.00 3742 199 0.1718 0.1777 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.100 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 10.770 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2013 REMARK 3 ANGLE : 0.947 2762 REMARK 3 CHIRALITY : 0.074 324 REMARK 3 PLANARITY : 0.006 402 REMARK 3 DIHEDRAL : 23.606 760 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5O6X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-JUN-17. REMARK 100 THE DEPOSITION ID IS D_1200005290. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 - 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 117838 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.350 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05900 REMARK 200 FOR THE DATA SET : 19.0600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.51900 REMARK 200 FOR SHELL : 3.680 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5EN4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 6000 20% HEPES 0.1 M PH 7.00, DMSO REMARK 280 5%, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 45.56600 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 45.56600 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 66.67250 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 45.56600 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 45.56600 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 66.67250 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 45.56600 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 45.56600 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 66.67250 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 45.56600 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 45.56600 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 66.67250 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 45.56600 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 45.56600 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 66.67250 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 45.56600 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 45.56600 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 66.67250 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 45.56600 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 45.56600 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 66.67250 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 45.56600 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 45.56600 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 66.67250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -187.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 91.13200 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 91.13200 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 517 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 645 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 THR A 3 REMARK 465 GLY A 4 REMARK 465 GLY A 254 REMARK 465 CYS A 255 REMARK 465 LYS A 256 REMARK 465 ALA A 257 REMARK 465 SER A 258 REMARK 465 ARG A 259 REMARK 465 SER A 260 REMARK 465 THR A 261 REMARK 465 PRO A 262 REMARK 465 VAL A 263 REMARK 465 ASP A 264 REMARK 465 PRO A 269 REMARK 465 SER A 270 REMARK 465 GLY A 271 REMARK 465 SER A 272 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 70 CD CE NZ REMARK 470 ARG A 98 NE CZ NH1 NH2 REMARK 470 GLN A 109 CD OE1 NE2 REMARK 470 LYS A 131 CD CE NZ REMARK 470 ARG A 203 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 207 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 208 CG CD OE1 OE2 REMARK 470 ILE A 268 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 555 O HOH A 584 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 140 -128.96 -96.68 REMARK 500 SER A 141 138.58 -170.92 REMARK 500 ALA A 151 39.00 -157.46 REMARK 500 ALA A 235 54.97 -108.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 645 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH A 646 DISTANCE = 6.55 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 302 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 50 O REMARK 620 2 GLU A 50 O 11.8 REMARK 620 3 LEU A 53 O 84.2 95.8 REMARK 620 4 ALA A 56 O 105.7 103.5 90.7 REMARK 620 5 HOH A 486 O 170.6 167.6 94.2 83.6 REMARK 620 6 HOH A 518 O 69.7 73.0 83.8 173.1 100.9 REMARK 620 7 HOH A 570 O 104.8 93.9 164.3 99.0 74.7 87.3 REMARK 620 N 1 2 3 4 5 6 DBREF 5O6X A 1 270 UNP Q9BPX1 DHB14_HUMAN 1 270 SEQADV 5O6X GLY A -1 UNP Q9BPX1 EXPRESSION TAG SEQADV 5O6X HIS A 0 UNP Q9BPX1 EXPRESSION TAG SEQADV 5O6X GLY A 271 UNP Q9BPX1 EXPRESSION TAG SEQADV 5O6X SER A 272 UNP Q9BPX1 EXPRESSION TAG SEQRES 1 A 274 GLY HIS MET ALA THR GLY THR ARG TYR ALA GLY LYS VAL SEQRES 2 A 274 VAL VAL VAL THR GLY GLY GLY ARG GLY ILE GLY ALA GLY SEQRES 3 A 274 ILE VAL ARG ALA PHE VAL ASN SER GLY ALA ARG VAL VAL SEQRES 4 A 274 ILE CYS ASP LYS ASP GLU SER GLY GLY ARG ALA LEU GLU SEQRES 5 A 274 GLN GLU LEU PRO GLY ALA VAL PHE ILE LEU CYS ASP VAL SEQRES 6 A 274 THR GLN GLU ASP ASP VAL LYS THR LEU VAL SER GLU THR SEQRES 7 A 274 ILE ARG ARG PHE GLY ARG LEU ASP CYS VAL VAL ASN ASN SEQRES 8 A 274 ALA GLY HIS HIS PRO PRO PRO GLN ARG PRO GLU GLU THR SEQRES 9 A 274 SER ALA GLN GLY PHE ARG GLN LEU LEU GLU LEU ASN LEU SEQRES 10 A 274 LEU GLY THR TYR THR LEU THR LYS LEU ALA LEU PRO TYR SEQRES 11 A 274 LEU ARG LYS SER GLN GLY ASN VAL ILE ASN ILE SER SER SEQRES 12 A 274 LEU VAL GLY ALA ILE GLY GLN ALA GLN ALA VAL PRO TYR SEQRES 13 A 274 VAL ALA THR LYS GLY ALA VAL THR ALA MET THR LYS ALA SEQRES 14 A 274 LEU ALA LEU ASP GLU SER PRO TYR GLY VAL ARG VAL ASN SEQRES 15 A 274 CYS ILE SER PRO GLY ASN ILE TRP THR PRO LEU TRP GLU SEQRES 16 A 274 GLU LEU ALA ALA LEU MET PRO ASP PRO ARG ALA THR ILE SEQRES 17 A 274 ARG GLU GLY MET LEU ALA GLN PRO LEU GLY ARG MET GLY SEQRES 18 A 274 GLN PRO ALA GLU VAL GLY ALA ALA ALA VAL PHE LEU ALA SEQRES 19 A 274 SER GLU ALA ASN PHE CYS THR GLY ILE GLU LEU LEU VAL SEQRES 20 A 274 THR GLY GLY ALA GLU LEU GLY TYR GLY CYS LYS ALA SER SEQRES 21 A 274 ARG SER THR PRO VAL ASP ALA PRO ASP ILE PRO SER GLY SEQRES 22 A 274 SER HET NAD A 301 44 HET NA A 302 1 HET BGC A 303 12 HET 9MK A 304 21 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM NA SODIUM ION HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM 9MK (4-FLUORANYL-3-OXIDANYL-PHENYL)-(6-METHYLQUINOLIN-2- HETNAM 2 9MK YL)METHANONE HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 2 NAD C21 H27 N7 O14 P2 FORMUL 3 NA NA 1+ FORMUL 4 BGC C6 H12 O6 FORMUL 5 9MK C17 H12 F N O2 FORMUL 6 HOH *246(H2 O) HELIX 1 AA1 ARG A 19 SER A 32 1 14 HELIX 2 AA2 ASP A 42 LEU A 53 1 12 HELIX 3 AA3 GLN A 65 GLY A 81 1 17 HELIX 4 AA4 ARG A 98 THR A 102 5 5 HELIX 5 AA5 SER A 103 LEU A 115 1 13 HELIX 6 AA6 LEU A 115 GLN A 133 1 19 HELIX 7 AA7 LEU A 142 GLY A 147 1 6 HELIX 8 AA8 ALA A 151 SER A 173 1 23 HELIX 9 AA9 PRO A 174 GLY A 176 5 3 HELIX 10 AB1 THR A 189 LEU A 198 1 10 HELIX 11 AB2 ASP A 201 ALA A 212 1 12 HELIX 12 AB3 GLN A 220 GLU A 234 1 15 SHEET 1 AA1 7 ALA A 56 LEU A 60 0 SHEET 2 AA1 7 ARG A 35 ASP A 40 1 N ILE A 38 O VAL A 57 SHEET 3 AA1 7 VAL A 11 THR A 15 1 N VAL A 12 O VAL A 37 SHEET 4 AA1 7 CYS A 85 ASN A 88 1 O VAL A 87 N VAL A 13 SHEET 5 AA1 7 ASN A 135 ILE A 139 1 O ILE A 137 N VAL A 86 SHEET 6 AA1 7 ARG A 178 PRO A 184 1 O ASN A 180 N VAL A 136 SHEET 7 AA1 7 GLU A 242 VAL A 245 1 O LEU A 243 N CYS A 181 LINK O AGLU A 50 NA NA A 302 1555 1555 2.43 LINK O BGLU A 50 NA NA A 302 1555 1555 2.30 LINK O LEU A 53 NA NA A 302 1555 1555 2.41 LINK O ALA A 56 NA NA A 302 1555 1555 2.40 LINK NA NA A 302 O HOH A 486 1555 1555 2.50 LINK NA NA A 302 O HOH A 518 1555 1555 2.59 LINK NA NA A 302 O HOH A 570 1555 1555 2.46 CRYST1 91.132 91.132 133.345 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010973 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010973 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007499 0.00000