HEADER IMMUNE SYSTEM 19-JUN-17 5O9K TITLE CRYSTAL STRUCTURE OF MURINE HISTMAINE-RELEASING FACTOR (HRF/TCTP) COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSLATIONALLY-CONTROLLED TUMOR PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TCTP,21 KDA POLYPEPTIDE,P21,P23; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: MURINE HISTAMINE-RELEASING FACTOR WITH C-TERMINAL HIS- COMPND 7 TAG SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: TPT1, TRT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI-PICHIA PASTORIS SHUTTLE VECTOR SOURCE 7 PPPARG4; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 1182032 KEYWDS IMMUNOGLOBULIN E, ALLERGY, HISTAMINE RELEASING FACTOR, TCTP, HRF, KEYWDS 2 P23, P21, FORTILIN, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR K.A.DORE,J.KASHIWAKURA,J.M.MCDONNELL,H.J.GOULD,T.KAWAKAMI,B.J.SUTTON, AUTHOR 2 A.M.DAVIES REVDAT 2 17-JAN-24 5O9K 1 REMARK REVDAT 1 20-DEC-17 5O9K 0 JRNL AUTH K.A.DORE,J.I.KASHIWAKURA,J.M.MCDONNELL,H.J.GOULD,T.KAWAKAMI, JRNL AUTH 2 B.J.SUTTON,A.M.DAVIES JRNL TITL CRYSTAL STRUCTURES OF MURINE AND HUMAN HISTAMINE-RELEASING JRNL TITL 2 FACTOR (HRF/TCTP) AND A MODEL FOR HRF DIMERISATION IN MAST JRNL TITL 3 CELL ACTIVATION. JRNL REF MOL. IMMUNOL. V. 93 216 2017 JRNL REFN ISSN 1872-9142 JRNL PMID 29216544 JRNL DOI 10.1016/J.MOLIMM.2017.11.022 REMARK 2 REMARK 2 RESOLUTION. 4.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 57.06 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.0 REMARK 3 NUMBER OF REFLECTIONS : 3125 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.302 REMARK 3 R VALUE (WORKING SET) : 0.300 REMARK 3 FREE R VALUE : 0.342 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 156 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 57.0647 - 4.0142 0.86 2969 156 0.2996 0.3416 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.480 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.190 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.001 2206 REMARK 3 ANGLE : 0.361 2987 REMARK 3 CHIRALITY : 0.039 339 REMARK 3 PLANARITY : 0.002 386 REMARK 3 DIHEDRAL : 5.732 1298 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 78 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.1172 106.3227 87.6918 REMARK 3 T TENSOR REMARK 3 T11: 1.4137 T22: -0.2935 REMARK 3 T33: 0.6332 T12: 0.7475 REMARK 3 T13: -0.0279 T23: 0.2971 REMARK 3 L TENSOR REMARK 3 L11: 0.6211 L22: 0.3900 REMARK 3 L33: 0.4032 L12: -0.0673 REMARK 3 L13: -0.4462 L23: -0.0660 REMARK 3 S TENSOR REMARK 3 S11: 0.5084 S12: -0.3039 S13: 0.3744 REMARK 3 S21: 0.3852 S22: -0.1195 S23: -0.4788 REMARK 3 S31: -0.0006 S32: 0.1919 S33: 0.8957 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 79 THROUGH 146 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.8342 98.6418 101.3533 REMARK 3 T TENSOR REMARK 3 T11: 1.7307 T22: 1.3975 REMARK 3 T33: 1.3276 T12: 0.4353 REMARK 3 T13: 0.0226 T23: 0.3149 REMARK 3 L TENSOR REMARK 3 L11: 0.1951 L22: 0.6696 REMARK 3 L33: 0.5521 L12: -0.3568 REMARK 3 L13: 0.1294 L23: -0.3187 REMARK 3 S TENSOR REMARK 3 S11: -0.8993 S12: 0.2319 S13: -0.6640 REMARK 3 S21: 1.1195 S22: -0.0179 S23: -0.2945 REMARK 3 S31: -1.4115 S32: -0.9858 S33: -0.0976 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 147 THROUGH 170 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.2170 107.1331 92.0683 REMARK 3 T TENSOR REMARK 3 T11: 1.8659 T22: 0.7380 REMARK 3 T33: 1.3514 T12: -0.1686 REMARK 3 T13: -0.3621 T23: 0.0796 REMARK 3 L TENSOR REMARK 3 L11: 0.1480 L22: 0.0524 REMARK 3 L33: 0.1621 L12: -0.0596 REMARK 3 L13: 0.0248 L23: 0.0507 REMARK 3 S TENSOR REMARK 3 S11: -0.2864 S12: 0.6124 S13: 0.6033 REMARK 3 S21: 0.2728 S22: -0.1502 S23: -0.0894 REMARK 3 S31: -0.0663 S32: -0.1681 S33: -0.0038 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.2463 116.6926 129.6827 REMARK 3 T TENSOR REMARK 3 T11: 0.0073 T22: 1.1024 REMARK 3 T33: 0.4982 T12: 0.8623 REMARK 3 T13: -0.1340 T23: 0.4108 REMARK 3 L TENSOR REMARK 3 L11: 0.9252 L22: 0.8212 REMARK 3 L33: 0.9920 L12: 0.2402 REMARK 3 L13: 0.4254 L23: 0.4464 REMARK 3 S TENSOR REMARK 3 S11: 0.2925 S12: 0.1753 S13: -0.0866 REMARK 3 S21: -0.4230 S22: 0.3073 S23: -0.6881 REMARK 3 S31: -0.3802 S32: -0.5143 S33: 1.6052 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 33 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.4821 109.3568 124.6769 REMARK 3 T TENSOR REMARK 3 T11: 2.0392 T22: 2.6768 REMARK 3 T33: 1.0907 T12: 1.3384 REMARK 3 T13: -0.0717 T23: 0.3668 REMARK 3 L TENSOR REMARK 3 L11: 0.3304 L22: 0.0753 REMARK 3 L33: 0.0491 L12: 0.0654 REMARK 3 L13: 0.1300 L23: 0.0562 REMARK 3 S TENSOR REMARK 3 S11: 0.6282 S12: 0.0523 S13: 0.0434 REMARK 3 S21: -0.5265 S22: -0.3882 S23: -0.2484 REMARK 3 S31: 0.0427 S32: -0.0448 S33: 0.1204 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 85 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.2052 122.0463 116.1021 REMARK 3 T TENSOR REMARK 3 T11: 0.9487 T22: 2.2112 REMARK 3 T33: 1.1511 T12: -0.0749 REMARK 3 T13: 0.0578 T23: 0.2953 REMARK 3 L TENSOR REMARK 3 L11: 0.0537 L22: 0.0699 REMARK 3 L33: 0.1423 L12: -0.0150 REMARK 3 L13: 0.0411 L23: -0.1205 REMARK 3 S TENSOR REMARK 3 S11: 0.7150 S12: 0.7499 S13: -0.0763 REMARK 3 S21: -0.6351 S22: -0.6956 S23: -0.4649 REMARK 3 S31: 0.0707 S32: 0.3285 S33: 0.0003 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 128 THROUGH 170 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.2863 116.4543 120.7711 REMARK 3 T TENSOR REMARK 3 T11: 1.1185 T22: 1.8946 REMARK 3 T33: 1.3659 T12: 0.2372 REMARK 3 T13: -0.0308 T23: 0.2240 REMARK 3 L TENSOR REMARK 3 L11: 0.1572 L22: 0.0425 REMARK 3 L33: 0.1084 L12: -0.0936 REMARK 3 L13: -0.0341 L23: 0.0062 REMARK 3 S TENSOR REMARK 3 S11: -0.2461 S12: -0.1875 S13: -0.5777 REMARK 3 S21: -0.4395 S22: -0.1041 S23: 0.1267 REMARK 3 S31: 0.5269 S32: 0.9699 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5O9K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-JUN-17. REMARK 100 THE DEPOSITION ID IS D_1200005408. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 A REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 3606 REMARK 200 RESOLUTION RANGE HIGH (A) : 4.010 REMARK 200 RESOLUTION RANGE LOW (A) : 57.060 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 11.60 REMARK 200 R MERGE (I) : 0.27100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.01 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : 12.00 REMARK 200 R MERGE FOR SHELL (I) : 1.89200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1YZ1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL PH8.4, 23% (W/V) PEG REMARK 280 2000 MME AND 0.01M NICKEL CHLORIDE, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 34.76500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.92500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.76500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.92500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 39 REMARK 465 GLU A 40 REMARK 465 GLY A 41 REMARK 465 ALA A 42 REMARK 465 ILE A 43 REMARK 465 ASP A 44 REMARK 465 ASP A 45 REMARK 465 SER A 46 REMARK 465 LEU A 47 REMARK 465 ILE A 48 REMARK 465 GLY A 49 REMARK 465 GLY A 50 REMARK 465 ASN A 51 REMARK 465 ALA A 52 REMARK 465 SER A 53 REMARK 465 ALA A 54 REMARK 465 GLU A 55 REMARK 465 GLY A 56 REMARK 465 PRO A 57 REMARK 465 GLU A 58 REMARK 465 GLY A 59 REMARK 465 GLU A 60 REMARK 465 GLY A 61 REMARK 465 THR A 62 REMARK 465 GLU A 63 REMARK 465 SER A 64 REMARK 465 THR A 65 REMARK 465 VAL A 66 REMARK 465 VAL A 67 REMARK 465 LYS A 171 REMARK 465 CYS A 172 REMARK 465 LEU A 173 REMARK 465 GLU A 174 REMARK 465 HIS A 175 REMARK 465 HIS A 176 REMARK 465 HIS A 177 REMARK 465 HIS A 178 REMARK 465 HIS A 179 REMARK 465 HIS A 180 REMARK 465 ALA B 42 REMARK 465 ILE B 43 REMARK 465 ASP B 44 REMARK 465 ASP B 45 REMARK 465 SER B 46 REMARK 465 LEU B 47 REMARK 465 ILE B 48 REMARK 465 GLY B 49 REMARK 465 GLY B 50 REMARK 465 ASN B 51 REMARK 465 ALA B 52 REMARK 465 SER B 53 REMARK 465 ALA B 54 REMARK 465 GLU B 55 REMARK 465 GLY B 56 REMARK 465 PRO B 57 REMARK 465 GLU B 58 REMARK 465 GLY B 59 REMARK 465 GLU B 60 REMARK 465 GLY B 61 REMARK 465 THR B 62 REMARK 465 GLU B 63 REMARK 465 SER B 64 REMARK 465 THR B 65 REMARK 465 VAL B 66 REMARK 465 LYS B 171 REMARK 465 CYS B 172 REMARK 465 LEU B 173 REMARK 465 GLU B 174 REMARK 465 HIS B 175 REMARK 465 HIS B 176 REMARK 465 HIS B 177 REMARK 465 HIS B 178 REMARK 465 HIS B 179 REMARK 465 HIS B 180 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 19 CG CD CE NZ REMARK 470 GLU A 22 CD OE1 OE2 REMARK 470 GLU A 32 CD OE1 OE2 REMARK 470 LYS A 34 CE NZ REMARK 470 ARG A 38 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 85 CD CE NZ REMARK 470 LYS A 89 CG CD CE NZ REMARK 470 LYS A 90 CD CE NZ REMARK 470 MET A 96 CG SD CE REMARK 470 LYS A 97 CE NZ REMARK 470 LYS A 100 CD CE NZ REMARK 470 LYS A 102 CG CD CE NZ REMARK 470 GLU A 104 CG CD OE1 OE2 REMARK 470 GLN A 106 CG CD OE1 NE2 REMARK 470 LYS A 107 CG CD CE NZ REMARK 470 GLU A 109 CG CD OE1 OE2 REMARK 470 LYS A 112 CG CD CE NZ REMARK 470 HIS A 124 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 138 CG CD OE1 OE2 REMARK 470 LYS A 164 CG CD CE NZ REMARK 470 LYS B 19 CG CD CE NZ REMARK 470 ARG B 21 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 22 CG CD OE1 OE2 REMARK 470 GLU B 32 CG CD OE1 OE2 REMARK 470 ARG B 38 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 40 CG CD OE1 OE2 REMARK 470 HIS B 77 CG ND1 CD2 CE1 NE2 REMARK 470 GLU B 86 CG CD OE1 OE2 REMARK 470 LYS B 89 CG CD CE NZ REMARK 470 LYS B 93 CG CD CE NZ REMARK 470 LYS B 97 CG CD CE NZ REMARK 470 LYS B 100 CG CD CE NZ REMARK 470 LYS B 102 CG CD CE NZ REMARK 470 GLU B 104 CG CD OE1 OE2 REMARK 470 GLU B 105 CG CD OE1 OE2 REMARK 470 GLN B 106 CG CD OE1 NE2 REMARK 470 LYS B 107 CG CD CE NZ REMARK 470 LYS B 112 CG CD CE NZ REMARK 470 GLU B 138 CG CD OE1 OE2 REMARK 470 ARG B 152 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 153 CG CD OE1 OE2 REMARK 470 LYS B 164 CG CD CE NZ REMARK 470 ASP B 165 CG OD1 OD2 REMARK 470 MET B 169 CG SD CE REMARK 470 GLU B 170 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 8 -71.67 -89.07 REMARK 500 ASN A 128 41.31 -108.36 REMARK 500 ARG A 152 -169.37 -77.67 REMARK 500 ILE B 8 -70.67 -89.23 REMARK 500 ARG B 38 -169.87 -102.75 REMARK 500 ARG B 152 -169.53 -78.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 201 DBREF 5O9K A 1 172 UNP P63028 TCTP_MOUSE 1 172 DBREF 5O9K B 1 172 UNP P63028 TCTP_MOUSE 1 172 SEQADV 5O9K LEU A 173 UNP P63028 EXPRESSION TAG SEQADV 5O9K GLU A 174 UNP P63028 EXPRESSION TAG SEQADV 5O9K HIS A 175 UNP P63028 EXPRESSION TAG SEQADV 5O9K HIS A 176 UNP P63028 EXPRESSION TAG SEQADV 5O9K HIS A 177 UNP P63028 EXPRESSION TAG SEQADV 5O9K HIS A 178 UNP P63028 EXPRESSION TAG SEQADV 5O9K HIS A 179 UNP P63028 EXPRESSION TAG SEQADV 5O9K HIS A 180 UNP P63028 EXPRESSION TAG SEQADV 5O9K LEU B 173 UNP P63028 EXPRESSION TAG SEQADV 5O9K GLU B 174 UNP P63028 EXPRESSION TAG SEQADV 5O9K HIS B 175 UNP P63028 EXPRESSION TAG SEQADV 5O9K HIS B 176 UNP P63028 EXPRESSION TAG SEQADV 5O9K HIS B 177 UNP P63028 EXPRESSION TAG SEQADV 5O9K HIS B 178 UNP P63028 EXPRESSION TAG SEQADV 5O9K HIS B 179 UNP P63028 EXPRESSION TAG SEQADV 5O9K HIS B 180 UNP P63028 EXPRESSION TAG SEQRES 1 A 180 MET ILE ILE TYR ARG ASP LEU ILE SER HIS ASP GLU LEU SEQRES 2 A 180 PHE SER ASP ILE TYR LYS ILE ARG GLU ILE ALA ASP GLY SEQRES 3 A 180 LEU CYS LEU GLU VAL GLU GLY LYS MET VAL SER ARG THR SEQRES 4 A 180 GLU GLY ALA ILE ASP ASP SER LEU ILE GLY GLY ASN ALA SEQRES 5 A 180 SER ALA GLU GLY PRO GLU GLY GLU GLY THR GLU SER THR SEQRES 6 A 180 VAL VAL THR GLY VAL ASP ILE VAL MET ASN HIS HIS LEU SEQRES 7 A 180 GLN GLU THR SER PHE THR LYS GLU ALA TYR LYS LYS TYR SEQRES 8 A 180 ILE LYS ASP TYR MET LYS SER LEU LYS GLY LYS LEU GLU SEQRES 9 A 180 GLU GLN LYS PRO GLU ARG VAL LYS PRO PHE MET THR GLY SEQRES 10 A 180 ALA ALA GLU GLN ILE LYS HIS ILE LEU ALA ASN PHE ASN SEQRES 11 A 180 ASN TYR GLN PHE PHE ILE GLY GLU ASN MET ASN PRO ASP SEQRES 12 A 180 GLY MET VAL ALA LEU LEU ASP TYR ARG GLU ASP GLY VAL SEQRES 13 A 180 THR PRO PHE MET ILE PHE PHE LYS ASP GLY LEU GLU MET SEQRES 14 A 180 GLU LYS CYS LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 180 MET ILE ILE TYR ARG ASP LEU ILE SER HIS ASP GLU LEU SEQRES 2 B 180 PHE SER ASP ILE TYR LYS ILE ARG GLU ILE ALA ASP GLY SEQRES 3 B 180 LEU CYS LEU GLU VAL GLU GLY LYS MET VAL SER ARG THR SEQRES 4 B 180 GLU GLY ALA ILE ASP ASP SER LEU ILE GLY GLY ASN ALA SEQRES 5 B 180 SER ALA GLU GLY PRO GLU GLY GLU GLY THR GLU SER THR SEQRES 6 B 180 VAL VAL THR GLY VAL ASP ILE VAL MET ASN HIS HIS LEU SEQRES 7 B 180 GLN GLU THR SER PHE THR LYS GLU ALA TYR LYS LYS TYR SEQRES 8 B 180 ILE LYS ASP TYR MET LYS SER LEU LYS GLY LYS LEU GLU SEQRES 9 B 180 GLU GLN LYS PRO GLU ARG VAL LYS PRO PHE MET THR GLY SEQRES 10 B 180 ALA ALA GLU GLN ILE LYS HIS ILE LEU ALA ASN PHE ASN SEQRES 11 B 180 ASN TYR GLN PHE PHE ILE GLY GLU ASN MET ASN PRO ASP SEQRES 12 B 180 GLY MET VAL ALA LEU LEU ASP TYR ARG GLU ASP GLY VAL SEQRES 13 B 180 THR PRO PHE MET ILE PHE PHE LYS ASP GLY LEU GLU MET SEQRES 14 B 180 GLU LYS CYS LEU GLU HIS HIS HIS HIS HIS HIS HET GOL B 201 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL C3 H8 O3 HELIX 1 AA1 ASP A 71 ASN A 75 1 5 HELIX 2 AA2 THR A 84 LYS A 107 1 24 HELIX 3 AA3 ARG A 110 ASN A 128 1 19 HELIX 4 AA4 PHE A 129 TYR A 132 5 4 HELIX 5 AA5 ASP B 71 ASN B 75 1 5 HELIX 6 AA6 THR B 84 LYS B 107 1 24 HELIX 7 AA7 ARG B 110 LEU B 126 1 17 HELIX 8 AA8 ASN B 128 TYR B 132 5 5 SHEET 1 AA1 3 GLU A 12 SER A 15 0 SHEET 2 AA1 3 ILE A 3 ASP A 6 -1 N TYR A 4 O PHE A 14 SHEET 3 AA1 3 LEU A 167 GLU A 170 -1 O GLU A 168 N ARG A 5 SHEET 1 AA2 6 LYS A 19 ILE A 23 0 SHEET 2 AA2 6 CYS A 28 GLU A 32 -1 O GLU A 30 N ARG A 21 SHEET 3 AA2 6 PRO A 158 PHE A 163 -1 O MET A 160 N VAL A 31 SHEET 4 AA2 6 ALA A 147 TYR A 151 -1 N LEU A 148 O ILE A 161 SHEET 5 AA2 6 GLN A 133 ILE A 136 -1 N PHE A 135 O ALA A 147 SHEET 6 AA2 6 GLN A 79 THR A 81 -1 N GLN A 79 O ILE A 136 SHEET 1 AA3 2 MET A 35 VAL A 36 0 SHEET 2 AA3 2 GLY A 69 VAL A 70 -1 O GLY A 69 N VAL A 36 SHEET 1 AA4 3 GLU B 12 SER B 15 0 SHEET 2 AA4 3 ILE B 3 ASP B 6 -1 N TYR B 4 O PHE B 14 SHEET 3 AA4 3 LEU B 167 GLU B 170 -1 O GLU B 168 N ARG B 5 SHEET 1 AA5 6 LYS B 19 ILE B 23 0 SHEET 2 AA5 6 CYS B 28 GLU B 32 -1 O GLU B 30 N ARG B 21 SHEET 3 AA5 6 PRO B 158 PHE B 163 -1 O MET B 160 N VAL B 31 SHEET 4 AA5 6 ALA B 147 TYR B 151 -1 N ASP B 150 O PHE B 159 SHEET 5 AA5 6 GLN B 133 ILE B 136 -1 N PHE B 135 O ALA B 147 SHEET 6 AA5 6 GLN B 79 THR B 81 -1 N GLN B 79 O ILE B 136 SHEET 1 AA6 2 MET B 35 SER B 37 0 SHEET 2 AA6 2 THR B 68 VAL B 70 -1 O GLY B 69 N VAL B 36 SITE 1 AC1 2 ILE A 17 ASP B 71 CRYST1 69.530 99.850 57.470 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014382 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010015 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017400 0.00000