data_5OAP # _entry.id 5OAP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.394 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5OAP pdb_00005oap 10.2210/pdb5oap/pdb WWPDB D_1200005467 ? ? BMRB 34152 ? 10.13018/BMR34152 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-04-18 2 'Structure model' 1 1 2018-04-25 3 'Structure model' 1 2 2018-05-09 4 'Structure model' 1 3 2019-05-08 5 'Structure model' 1 4 2024-06-19 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 4 'Structure model' 'Data collection' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' citation 3 4 'Structure model' pdbx_nmr_software 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' database_2 7 5 'Structure model' pdbx_nmr_spectrometer # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_id_ISSN' 2 2 'Structure model' '_citation.pdbx_database_id_PubMed' 3 2 'Structure model' '_citation.title' 4 3 'Structure model' '_citation.journal_volume' 5 3 'Structure model' '_citation.page_first' 6 3 'Structure model' '_citation.page_last' 7 4 'Structure model' '_pdbx_nmr_software.name' 8 5 'Structure model' '_database_2.pdbx_DOI' 9 5 'Structure model' '_database_2.pdbx_database_accession' 10 5 'Structure model' '_pdbx_nmr_spectrometer.model' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5OAP _pdbx_database_status.recvd_initial_deposition_date 2017-06-23 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Solution NMR structure of DREB2A(255-272) bound to RCD1-RST' _pdbx_database_related.db_id 34152 _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Bugge, K.' 1 0000-0002-6286-6243 'Staby, L.' 2 0000-0002-5588-5163 'Skriver, K.' 3 0000-0003-2225-4012 'Kragelund, B.B.' 4 0000-0002-7454-1761 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Structure _citation.journal_id_ASTM STRUE6 _citation.journal_id_CSD 2005 _citation.journal_id_ISSN 1878-4186 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 26 _citation.language ? _citation.page_first 734 _citation.page_last 746.e7 _citation.title 'Structure of Radical-Induced Cell Death1 Hub Domain Reveals a Common alpha alpha-Scaffold for Disorder in Transcriptional Networks.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.str.2018.03.013 _citation.pdbx_database_id_PubMed 29657132 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bugge, K.' 1 ? primary 'Staby, L.' 2 ? primary 'Kemplen, K.R.' 3 ? primary ;O'Shea, C. ; 4 ? primary 'Bendsen, S.K.' 5 ? primary 'Jensen, M.K.' 6 ? primary 'Olsen, J.G.' 7 ? primary 'Skriver, K.' 8 ? primary 'Kragelund, B.B.' 9 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description DREB2A _entity.formula_weight 2057.134 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details 'Residues 255-272' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code SSDMFDVDELLRDLNGDD _entity_poly.pdbx_seq_one_letter_code_can SSDMFDVDELLRDLNGDD _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 SER n 1 3 ASP n 1 4 MET n 1 5 PHE n 1 6 ASP n 1 7 VAL n 1 8 ASP n 1 9 GLU n 1 10 LEU n 1 11 LEU n 1 12 ARG n 1 13 ASP n 1 14 LEU n 1 15 ASN n 1 16 GLY n 1 17 ASP n 1 18 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 18 _entity_src_gen.gene_src_common_name 'Mouse-ear cress' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene AXX17_At5g04900 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Arabidopsis thaliana' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 3702 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 255 255 SER SER A . n A 1 2 SER 2 256 256 SER SER A . n A 1 3 ASP 3 257 257 ASP ASP A . n A 1 4 MET 4 258 258 MET MET A . n A 1 5 PHE 5 259 259 PHE PHE A . n A 1 6 ASP 6 260 260 ASP ASP A . n A 1 7 VAL 7 261 261 VAL VAL A . n A 1 8 ASP 8 262 262 ASP ASP A . n A 1 9 GLU 9 263 263 GLU GLU A . n A 1 10 LEU 10 264 264 LEU LEU A . n A 1 11 LEU 11 265 265 LEU LEU A . n A 1 12 ARG 12 266 266 ARG ARG A . n A 1 13 ASP 13 267 267 ASP ASP A . n A 1 14 LEU 14 268 268 LEU LEU A . n A 1 15 ASN 15 269 269 ASN ASN A . n A 1 16 GLY 16 270 270 GLY GLY A . n A 1 17 ASP 17 271 271 ASP ASP A . n A 1 18 ASP 18 272 272 ASP ASP A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5OAP _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 5OAP _struct.title 'Solution NMR structure of DREB2A(255-272) bound to RCD1-RST' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5OAP _struct_keywords.text 'plant protein, transcription factor, folding upon binding, IDP, TRANSCRIPTION' _struct_keywords.pdbx_keywords TRANSCRIPTION # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A178UP08_ARATH _struct_ref.pdbx_db_accession A0A178UP08 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code SSDMFDVDELLRDLNGDD _struct_ref.pdbx_align_begin 261 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5OAP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 18 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0A178UP08 _struct_ref_seq.db_align_beg 261 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 278 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 255 _struct_ref_seq.pdbx_auth_seq_align_end 272 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 1980 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'isothermal titration calorimetry' _pdbx_struct_assembly_auth_evidence.details 'Kd=120 nM' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id ASP _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 6 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id ASP _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 17 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ASP _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 260 _struct_conf.end_auth_comp_id ASP _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 271 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 2 MET A 258 ? ? -101.42 -162.80 2 4 MET A 258 ? ? -106.21 -165.49 3 5 MET A 258 ? ? -107.44 -163.80 4 6 MET A 258 ? ? -105.73 -162.21 5 7 MET A 258 ? ? -111.22 -165.02 6 8 MET A 258 ? ? -105.64 -163.82 7 9 MET A 258 ? ? -108.65 -165.85 8 10 MET A 258 ? ? -115.80 -163.97 9 11 MET A 258 ? ? -115.93 -167.93 10 12 MET A 258 ? ? -110.34 -162.11 11 14 MET A 258 ? ? -104.78 -162.87 12 15 MET A 258 ? ? -116.84 -164.38 13 16 MET A 258 ? ? -103.95 -163.05 14 18 MET A 258 ? ? -103.17 -164.33 15 19 MET A 258 ? ? -103.07 -166.38 16 20 MET A 258 ? ? -109.23 -163.74 # _pdbx_nmr_ensemble.entry_id 5OAP _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 5OAP _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '240 uM [U-13C; U-15N] DREB2A, 240 uM RCD1-RST, 0.2 mg/mL sodium azide, 0.7 mM DSS, 90% H2O/10% D2O' '90% H2O/10% D2O' 13C15N_1 solution ? 2 '200 uM [U-15N] DREB2A, 200 uM RCD1-RST, 0.2 mg/mL sodium azide, 0.7 mM DSS, 90% H2O/10% D2O' '90% H2O/10% D2O' 15N_1 solution ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 DREB2A 240 ? uM '[U-13C; U-15N]' 1 RCD1-RST 240 ? uM 'natural abundance' 1 'sodium azide' 0.2 ? mg/mL 'natural abundance' 1 DSS 0.7 ? mM 'natural abundance' 2 DREB2A 200 ? uM '[U-15N]' 2 RCD1-RST 200 ? uM 'natural abundance' 2 'sodium azide' 0.2 ? mg/mL 'natural abundance' 2 DSS 0.7 ? mM 'natural abundance' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength '100 mM NaCl' _pdbx_nmr_exptl_sample_conditions.details '100 mM NaCl' _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label Conditions_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 2 '3D HNHA' 4 isotropic 2 1 1 '2D 1H-15N HSQC' 3 isotropic 11 1 1 '3D HNCO' 3 isotropic 12 1 1 '3D HN(CA)CO' 3 isotropic 3 1 1 '3D HNCACB' 3 isotropic 5 1 1 '3D CBCA(CO)NH' 3 isotropic 9 1 1 '3D 1H-15N NOESY' 4 isotropic 8 1 1 '3D 1H-13C NOESY aliphatic' 2 isotropic 7 1 1 '3D 1H-13C NOESY aliphatic' 2 isotropic 6 1 1 '2D 1H-15N HSQC' 2 isotropic 10 1 1 '3D 1H-13C NOESY aromatic' 1 isotropic # _pdbx_nmr_refine.entry_id 5OAP _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 7 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 'chemical shift assignment' 'CcpNmr Analysis' ? CCPN 2 collection VNMR ? Varian 3 collection TopSpin ? 'Bruker Biospin' 4 'data analysis' 'CcpNmr Analysis' ? CCPN 5 'geometry optimization' 'PROCHECK / PROCHECK-NMR' ? 'Laskowski and MacArthur' 6 processing NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 7 refinement Xplor-NIH ? 'Schwieters, Kuszewski, Tjandra and Clore' 8 'data analysis' TALOS ? 'Cornilescu, Delaglio and Bax' 9 'structure calculation' CYANA ? 'Guntert, Mumenthaler and Wuthrich' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ARG N N N N 1 ARG CA C N S 2 ARG C C N N 3 ARG O O N N 4 ARG CB C N N 5 ARG CG C N N 6 ARG CD C N N 7 ARG NE N N N 8 ARG CZ C N N 9 ARG NH1 N N N 10 ARG NH2 N N N 11 ARG OXT O N N 12 ARG H H N N 13 ARG H2 H N N 14 ARG HA H N N 15 ARG HB2 H N N 16 ARG HB3 H N N 17 ARG HG2 H N N 18 ARG HG3 H N N 19 ARG HD2 H N N 20 ARG HD3 H N N 21 ARG HE H N N 22 ARG HH11 H N N 23 ARG HH12 H N N 24 ARG HH21 H N N 25 ARG HH22 H N N 26 ARG HXT H N N 27 ASN N N N N 28 ASN CA C N S 29 ASN C C N N 30 ASN O O N N 31 ASN CB C N N 32 ASN CG C N N 33 ASN OD1 O N N 34 ASN ND2 N N N 35 ASN OXT O N N 36 ASN H H N N 37 ASN H2 H N N 38 ASN HA H N N 39 ASN HB2 H N N 40 ASN HB3 H N N 41 ASN HD21 H N N 42 ASN HD22 H N N 43 ASN HXT H N N 44 ASP N N N N 45 ASP CA C N S 46 ASP C C N N 47 ASP O O N N 48 ASP CB C N N 49 ASP CG C N N 50 ASP OD1 O N N 51 ASP OD2 O N N 52 ASP OXT O N N 53 ASP H H N N 54 ASP H2 H N N 55 ASP HA H N N 56 ASP HB2 H N N 57 ASP HB3 H N N 58 ASP HD2 H N N 59 ASP HXT H N N 60 GLU N N N N 61 GLU CA C N S 62 GLU C C N N 63 GLU O O N N 64 GLU CB C N N 65 GLU CG C N N 66 GLU CD C N N 67 GLU OE1 O N N 68 GLU OE2 O N N 69 GLU OXT O N N 70 GLU H H N N 71 GLU H2 H N N 72 GLU HA H N N 73 GLU HB2 H N N 74 GLU HB3 H N N 75 GLU HG2 H N N 76 GLU HG3 H N N 77 GLU HE2 H N N 78 GLU HXT H N N 79 GLY N N N N 80 GLY CA C N N 81 GLY C C N N 82 GLY O O N N 83 GLY OXT O N N 84 GLY H H N N 85 GLY H2 H N N 86 GLY HA2 H N N 87 GLY HA3 H N N 88 GLY HXT H N N 89 LEU N N N N 90 LEU CA C N S 91 LEU C C N N 92 LEU O O N N 93 LEU CB C N N 94 LEU CG C N N 95 LEU CD1 C N N 96 LEU CD2 C N N 97 LEU OXT O N N 98 LEU H H N N 99 LEU H2 H N N 100 LEU HA H N N 101 LEU HB2 H N N 102 LEU HB3 H N N 103 LEU HG H N N 104 LEU HD11 H N N 105 LEU HD12 H N N 106 LEU HD13 H N N 107 LEU HD21 H N N 108 LEU HD22 H N N 109 LEU HD23 H N N 110 LEU HXT H N N 111 MET N N N N 112 MET CA C N S 113 MET C C N N 114 MET O O N N 115 MET CB C N N 116 MET CG C N N 117 MET SD S N N 118 MET CE C N N 119 MET OXT O N N 120 MET H H N N 121 MET H2 H N N 122 MET HA H N N 123 MET HB2 H N N 124 MET HB3 H N N 125 MET HG2 H N N 126 MET HG3 H N N 127 MET HE1 H N N 128 MET HE2 H N N 129 MET HE3 H N N 130 MET HXT H N N 131 PHE N N N N 132 PHE CA C N S 133 PHE C C N N 134 PHE O O N N 135 PHE CB C N N 136 PHE CG C Y N 137 PHE CD1 C Y N 138 PHE CD2 C Y N 139 PHE CE1 C Y N 140 PHE CE2 C Y N 141 PHE CZ C Y N 142 PHE OXT O N N 143 PHE H H N N 144 PHE H2 H N N 145 PHE HA H N N 146 PHE HB2 H N N 147 PHE HB3 H N N 148 PHE HD1 H N N 149 PHE HD2 H N N 150 PHE HE1 H N N 151 PHE HE2 H N N 152 PHE HZ H N N 153 PHE HXT H N N 154 SER N N N N 155 SER CA C N S 156 SER C C N N 157 SER O O N N 158 SER CB C N N 159 SER OG O N N 160 SER OXT O N N 161 SER H H N N 162 SER H2 H N N 163 SER HA H N N 164 SER HB2 H N N 165 SER HB3 H N N 166 SER HG H N N 167 SER HXT H N N 168 VAL N N N N 169 VAL CA C N S 170 VAL C C N N 171 VAL O O N N 172 VAL CB C N N 173 VAL CG1 C N N 174 VAL CG2 C N N 175 VAL OXT O N N 176 VAL H H N N 177 VAL H2 H N N 178 VAL HA H N N 179 VAL HB H N N 180 VAL HG11 H N N 181 VAL HG12 H N N 182 VAL HG13 H N N 183 VAL HG21 H N N 184 VAL HG22 H N N 185 VAL HG23 H N N 186 VAL HXT H N N 187 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ARG N CA sing N N 1 ARG N H sing N N 2 ARG N H2 sing N N 3 ARG CA C sing N N 4 ARG CA CB sing N N 5 ARG CA HA sing N N 6 ARG C O doub N N 7 ARG C OXT sing N N 8 ARG CB CG sing N N 9 ARG CB HB2 sing N N 10 ARG CB HB3 sing N N 11 ARG CG CD sing N N 12 ARG CG HG2 sing N N 13 ARG CG HG3 sing N N 14 ARG CD NE sing N N 15 ARG CD HD2 sing N N 16 ARG CD HD3 sing N N 17 ARG NE CZ sing N N 18 ARG NE HE sing N N 19 ARG CZ NH1 sing N N 20 ARG CZ NH2 doub N N 21 ARG NH1 HH11 sing N N 22 ARG NH1 HH12 sing N N 23 ARG NH2 HH21 sing N N 24 ARG NH2 HH22 sing N N 25 ARG OXT HXT sing N N 26 ASN N CA sing N N 27 ASN N H sing N N 28 ASN N H2 sing N N 29 ASN CA C sing N N 30 ASN CA CB sing N N 31 ASN CA HA sing N N 32 ASN C O doub N N 33 ASN C OXT sing N N 34 ASN CB CG sing N N 35 ASN CB HB2 sing N N 36 ASN CB HB3 sing N N 37 ASN CG OD1 doub N N 38 ASN CG ND2 sing N N 39 ASN ND2 HD21 sing N N 40 ASN ND2 HD22 sing N N 41 ASN OXT HXT sing N N 42 ASP N CA sing N N 43 ASP N H sing N N 44 ASP N H2 sing N N 45 ASP CA C sing N N 46 ASP CA CB sing N N 47 ASP CA HA sing N N 48 ASP C O doub N N 49 ASP C OXT sing N N 50 ASP CB CG sing N N 51 ASP CB HB2 sing N N 52 ASP CB HB3 sing N N 53 ASP CG OD1 doub N N 54 ASP CG OD2 sing N N 55 ASP OD2 HD2 sing N N 56 ASP OXT HXT sing N N 57 GLU N CA sing N N 58 GLU N H sing N N 59 GLU N H2 sing N N 60 GLU CA C sing N N 61 GLU CA CB sing N N 62 GLU CA HA sing N N 63 GLU C O doub N N 64 GLU C OXT sing N N 65 GLU CB CG sing N N 66 GLU CB HB2 sing N N 67 GLU CB HB3 sing N N 68 GLU CG CD sing N N 69 GLU CG HG2 sing N N 70 GLU CG HG3 sing N N 71 GLU CD OE1 doub N N 72 GLU CD OE2 sing N N 73 GLU OE2 HE2 sing N N 74 GLU OXT HXT sing N N 75 GLY N CA sing N N 76 GLY N H sing N N 77 GLY N H2 sing N N 78 GLY CA C sing N N 79 GLY CA HA2 sing N N 80 GLY CA HA3 sing N N 81 GLY C O doub N N 82 GLY C OXT sing N N 83 GLY OXT HXT sing N N 84 LEU N CA sing N N 85 LEU N H sing N N 86 LEU N H2 sing N N 87 LEU CA C sing N N 88 LEU CA CB sing N N 89 LEU CA HA sing N N 90 LEU C O doub N N 91 LEU C OXT sing N N 92 LEU CB CG sing N N 93 LEU CB HB2 sing N N 94 LEU CB HB3 sing N N 95 LEU CG CD1 sing N N 96 LEU CG CD2 sing N N 97 LEU CG HG sing N N 98 LEU CD1 HD11 sing N N 99 LEU CD1 HD12 sing N N 100 LEU CD1 HD13 sing N N 101 LEU CD2 HD21 sing N N 102 LEU CD2 HD22 sing N N 103 LEU CD2 HD23 sing N N 104 LEU OXT HXT sing N N 105 MET N CA sing N N 106 MET N H sing N N 107 MET N H2 sing N N 108 MET CA C sing N N 109 MET CA CB sing N N 110 MET CA HA sing N N 111 MET C O doub N N 112 MET C OXT sing N N 113 MET CB CG sing N N 114 MET CB HB2 sing N N 115 MET CB HB3 sing N N 116 MET CG SD sing N N 117 MET CG HG2 sing N N 118 MET CG HG3 sing N N 119 MET SD CE sing N N 120 MET CE HE1 sing N N 121 MET CE HE2 sing N N 122 MET CE HE3 sing N N 123 MET OXT HXT sing N N 124 PHE N CA sing N N 125 PHE N H sing N N 126 PHE N H2 sing N N 127 PHE CA C sing N N 128 PHE CA CB sing N N 129 PHE CA HA sing N N 130 PHE C O doub N N 131 PHE C OXT sing N N 132 PHE CB CG sing N N 133 PHE CB HB2 sing N N 134 PHE CB HB3 sing N N 135 PHE CG CD1 doub Y N 136 PHE CG CD2 sing Y N 137 PHE CD1 CE1 sing Y N 138 PHE CD1 HD1 sing N N 139 PHE CD2 CE2 doub Y N 140 PHE CD2 HD2 sing N N 141 PHE CE1 CZ doub Y N 142 PHE CE1 HE1 sing N N 143 PHE CE2 CZ sing Y N 144 PHE CE2 HE2 sing N N 145 PHE CZ HZ sing N N 146 PHE OXT HXT sing N N 147 SER N CA sing N N 148 SER N H sing N N 149 SER N H2 sing N N 150 SER CA C sing N N 151 SER CA CB sing N N 152 SER CA HA sing N N 153 SER C O doub N N 154 SER C OXT sing N N 155 SER CB OG sing N N 156 SER CB HB2 sing N N 157 SER CB HB3 sing N N 158 SER OG HG sing N N 159 SER OXT HXT sing N N 160 VAL N CA sing N N 161 VAL N H sing N N 162 VAL N H2 sing N N 163 VAL CA C sing N N 164 VAL CA CB sing N N 165 VAL CA HA sing N N 166 VAL C O doub N N 167 VAL C OXT sing N N 168 VAL CB CG1 sing N N 169 VAL CB CG2 sing N N 170 VAL CB HB sing N N 171 VAL CG1 HG11 sing N N 172 VAL CG1 HG12 sing N N 173 VAL CG1 HG13 sing N N 174 VAL CG2 HG21 sing N N 175 VAL CG2 HG22 sing N N 176 VAL CG2 HG23 sing N N 177 VAL OXT HXT sing N N 178 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Danish Research Councils' Denmark 4181-00344 1 'Novo Nordisk Foundation' Denmark ? 2 # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 INOVA ? Varian 800 ? 2 AVANCE ? Bruker 750 ? 3 AVANCE ? Bruker 600 ? 4 INOVA ? Varian 750 ? # _atom_sites.entry_id 5OAP _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ #