HEADER IMMUNE SYSTEM 30-JUN-17 5OCC TITLE CRYSTAL STRUCTURE OF CD32B (FC GAMMA RECEPTOR IIB) IN COMPLEX WITH TITLE 2 HUMAN IGG1 FAB FRAGMENT (6G08) CAVEAT 5OCC NAG B 1 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LOW AFFINITY IMMUNOGLOBULIN GAMMA FC REGION RECEPTOR II-B; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: IGG FC RECEPTOR II-B,CDW32,FC-GAMMA RII-B,FCRII-B; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: CRYSTAL STRUCTURE DOES NOT RESOLVE RESIDUES 1-10, 32- COMPND 7 36. RESIDUE 44 MODELLED AS ALA DUE TO LACK OF DENSITY.; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: 6G08 FAB HEAVY CHAIN; COMPND 10 CHAIN: H; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: 6G08 FAB LIGHT CHAIN; COMPND 14 CHAIN: L; COMPND 15 ENGINEERED: YES; COMPND 16 OTHER_DETAILS: TERMINAL SERINE IS NOT RESOLVED IN RESOLVED IN COMPND 17 ELECTRON DENSITY SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FCGR2B, CD32, FCG2, IGFR2; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_VARIANT: EBNA; SOURCE 10 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 16 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 18 EXPRESSION_SYSTEM_VARIANT: EBNA; SOURCE 19 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 20 MOL_ID: 3; SOURCE 21 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 22 ORGANISM_COMMON: HUMAN; SOURCE 23 ORGANISM_TAXID: 9606; SOURCE 24 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 25 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 26 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 27 EXPRESSION_SYSTEM_VARIANT: EBNA; SOURCE 28 EXPRESSION_SYSTEM_CELL_LINE: HEK293 KEYWDS CD32B, COMPLEX, FAB, MAB, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR I.TEWS,C.ORR REVDAT 3 29-JUL-20 5OCC 1 CAVEAT COMPND REMARK HETNAM REVDAT 3 2 1 LINK SITE ATOM REVDAT 2 16-OCT-19 5OCC 1 REMARK REVDAT 1 25-JUL-18 5OCC 0 JRNL AUTH E.J.SUTTON,R.T.BRADSHAW,C.M.ORR,B.FRENDEUS,G.LARSSON, JRNL AUTH 2 I.TEIGE,M.S.CRAGG,I.TEWS,J.W.ESSEX JRNL TITL EVALUATING ANTI-CD32B F(AB) CONFORMATION USING MOLECULAR JRNL TITL 2 DYNAMICS AND SMALL-ANGLE X-RAY SCATTERING. JRNL REF BIOPHYS. J. V. 115 289 2018 JRNL REFN ESSN 1542-0086 JRNL PMID 30021105 JRNL DOI 10.1016/J.BPJ.2018.03.040 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 134.95 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 23884 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1281 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1707 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.3310 REMARK 3 BIN FREE R VALUE SET COUNT : 99 REMARK 3 BIN FREE R VALUE : 0.3550 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4513 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 59 REMARK 3 SOLVENT ATOMS : 105 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.81000 REMARK 3 B22 (A**2) : 3.17000 REMARK 3 B33 (A**2) : 0.64000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.466 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.294 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.248 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 24.589 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.908 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4689 ; 0.021 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4135 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6396 ; 2.178 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9686 ; 1.154 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 596 ; 8.337 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 179 ;39.293 ;24.804 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 713 ;16.704 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;17.558 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 725 ; 0.119 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5191 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 892 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2396 ; 1.343 ; 2.237 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2395 ; 1.331 ; 2.235 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2988 ; 2.286 ; 3.348 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2989 ; 2.286 ; 3.350 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2293 ; 1.777 ; 2.361 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2293 ; 1.777 ; 2.361 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3409 ; 2.555 ; 3.470 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4911 ; 5.247 ;26.017 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4906 ; 5.248 ;25.969 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 52 A 303 REMARK 3 ORIGIN FOR THE GROUP (A): 14.5426 24.9952 -55.4600 REMARK 3 T TENSOR REMARK 3 T11: 0.3373 T22: 0.6079 REMARK 3 T33: 0.5439 T12: 0.0052 REMARK 3 T13: 0.1462 T23: -0.1449 REMARK 3 L TENSOR REMARK 3 L11: 3.3595 L22: 1.6350 REMARK 3 L33: 2.6726 L12: -1.3693 REMARK 3 L13: -0.4219 L23: -0.4439 REMARK 3 S TENSOR REMARK 3 S11: -0.0334 S12: 0.1875 S13: -0.1403 REMARK 3 S21: -0.2904 S22: 0.1653 S23: -0.5419 REMARK 3 S31: 0.2484 S32: 0.5999 S33: -0.1318 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 1 H 222 REMARK 3 ORIGIN FOR THE GROUP (A): 0.3516 22.4698 -17.9496 REMARK 3 T TENSOR REMARK 3 T11: 0.0345 T22: 0.1401 REMARK 3 T33: 0.1260 T12: 0.0382 REMARK 3 T13: -0.0284 T23: -0.0096 REMARK 3 L TENSOR REMARK 3 L11: 0.6947 L22: 1.0950 REMARK 3 L33: 3.9315 L12: 0.1730 REMARK 3 L13: -0.6390 L23: -1.4414 REMARK 3 S TENSOR REMARK 3 S11: -0.0868 S12: 0.0391 S13: 0.0730 REMARK 3 S21: -0.1277 S22: -0.0889 S23: 0.0959 REMARK 3 S31: 0.1239 S32: 0.0757 S33: 0.1757 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : L 1 L 216 REMARK 3 ORIGIN FOR THE GROUP (A): -16.4609 28.3334 -16.4602 REMARK 3 T TENSOR REMARK 3 T11: 0.0145 T22: 0.2002 REMARK 3 T33: 0.1441 T12: 0.0060 REMARK 3 T13: 0.0022 T23: 0.0041 REMARK 3 L TENSOR REMARK 3 L11: 0.6031 L22: 0.4037 REMARK 3 L33: 4.8996 L12: 0.2525 REMARK 3 L13: -1.2301 L23: -0.7478 REMARK 3 S TENSOR REMARK 3 S11: -0.0132 S12: 0.1025 S13: 0.2062 REMARK 3 S21: -0.0593 S22: 0.0685 S23: 0.1190 REMARK 3 S31: 0.1401 S32: -0.4370 S33: -0.0553 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5OCC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-JUN-17. REMARK 100 THE DEPOSITION ID IS D_1200001634. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23884 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 134.950 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.13400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MES, 0.01M ZINC CHLORIDE, 20% PEG REMARK 280 6000, PH 6.0, PH 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.11500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.47500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.51000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.47500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.11500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.51000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, H, L, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 43 REMARK 465 PRO A 44 REMARK 465 ALA A 45 REMARK 465 ALA A 46 REMARK 465 PRO A 47 REMARK 465 PRO A 48 REMARK 465 LYS A 49 REMARK 465 ALA A 50 REMARK 465 VAL A 51 REMARK 465 GLY A 73 REMARK 465 THR A 74 REMARK 465 HIS A 75 REMARK 465 SER A 76 REMARK 465 PRO A 77 REMARK 465 SER L 217 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 85 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU H 156 CD GLU H 156 OE1 0.069 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP L 95 CB - CG - OD1 ANGL. DEV. = -5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 64 -8.90 79.78 REMARK 500 SER A 79 29.88 -167.07 REMARK 500 ASP A 80 -70.59 -129.07 REMARK 500 ASN A 89 172.37 -39.01 REMARK 500 PRO A 92 -119.17 -66.42 REMARK 500 THR A 93 -58.99 60.21 REMARK 500 HIS A 94 51.78 -117.17 REMARK 500 THR A 95 62.50 -102.28 REMARK 500 GLN A 96 -154.57 -89.14 REMARK 500 ASN A 106 16.39 -65.50 REMARK 500 LEU A 120 128.39 -34.49 REMARK 500 LYS A 162 83.39 70.19 REMARK 500 SER A 177 -10.01 -154.16 REMARK 500 HIS A 188 -41.50 -28.56 REMARK 500 ALA A 216 51.05 -114.57 REMARK 500 LEU H 29 -30.87 -36.62 REMARK 500 VAL H 100 -37.42 -135.16 REMARK 500 THR H 115 116.76 -162.44 REMARK 500 ASP H 152 64.18 63.27 REMARK 500 THR H 199 23.07 -142.38 REMARK 500 ASN L 28 -83.22 -135.17 REMARK 500 ASP L 34 141.72 -31.67 REMARK 500 LEU L 49 -50.50 -125.28 REMARK 500 ASP L 53 -54.14 82.27 REMARK 500 SER L 58 137.17 -37.99 REMARK 500 LEU L 80 144.20 -39.19 REMARK 500 ASN L 133 38.81 75.58 REMARK 500 ASP L 156 -130.01 59.87 REMARK 500 ASN L 175 -7.83 73.01 REMARK 500 REMARK 500 REMARK: NULL DBREF 5OCC A 43 218 UNP P31994 FCG2B_HUMAN 43 218 DBREF 5OCC H 1 222 PDB 5OCC 5OCC 1 222 DBREF 5OCC L 1 217 PDB 5OCC 5OCC 1 217 SEQRES 1 A 176 THR PRO ALA ALA PRO PRO LYS ALA VAL LEU LYS LEU GLU SEQRES 2 A 176 PRO GLN TRP ILE ASN VAL LEU GLN GLU ASP SER VAL THR SEQRES 3 A 176 LEU THR CYS ARG GLY THR HIS SER PRO GLU SER ASP SER SEQRES 4 A 176 ILE GLN TRP PHE HIS ASN GLY ASN LEU ILE PRO THR HIS SEQRES 5 A 176 THR GLN PRO SER TYR ARG PHE LYS ALA ASN ASN ASN ASP SEQRES 6 A 176 SER GLY GLU TYR THR CYS GLN THR GLY GLN THR SER LEU SEQRES 7 A 176 SER ASP PRO VAL HIS LEU THR VAL LEU SER GLU TRP LEU SEQRES 8 A 176 VAL LEU GLN THR PRO HIS LEU GLU PHE GLN GLU GLY GLU SEQRES 9 A 176 THR ILE VAL LEU ARG CYS HIS SER TRP LYS ASP LYS PRO SEQRES 10 A 176 LEU VAL LYS VAL THR PHE PHE GLN ASN GLY LYS SER LYS SEQRES 11 A 176 LYS PHE SER ARG SER ASP PRO ASN PHE SER ILE PRO GLN SEQRES 12 A 176 ALA ASN HIS SER HIS SER GLY ASP TYR HIS CYS THR GLY SEQRES 13 A 176 ASN ILE GLY TYR THR LEU TYR SER SER LYS PRO VAL THR SEQRES 14 A 176 ILE THR VAL GLN ALA PRO SER SEQRES 1 H 222 GLU VAL GLN LEU LEU GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 H 222 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 222 PHE THR LEU SER SER TYR GLY ILE SER TRP VAL ARG GLN SEQRES 4 H 222 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER GLY ILE SER SEQRES 5 H 222 GLY SER GLY GLY ASN THR TYR TYR ALA ASP SER VAL LYS SEQRES 6 H 222 GLY ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN THR SEQRES 7 H 222 LEU TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 H 222 ALA VAL TYR TYR CYS ALA SER SER VAL GLY ALA TYR ALA SEQRES 9 H 222 ASN ASP ALA PHE ASP ILE TRP GLY GLN GLY THR LEU VAL SEQRES 10 H 222 THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE SEQRES 11 H 222 PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY THR SEQRES 12 H 222 ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU SEQRES 13 H 222 PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER SEQRES 14 H 222 GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY SEQRES 15 H 222 LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SEQRES 16 H 222 SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS SEQRES 17 H 222 LYS PRO SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO SEQRES 18 H 222 LYS SEQRES 1 L 217 GLN SER VAL LEU THR GLN PRO PRO SER ALA SER GLY THR SEQRES 2 L 217 PRO GLY GLN ARG VAL THR ILE SER CYS THR GLY SER SER SEQRES 3 L 217 SER ASN ILE GLY ALA GLY TYR ASP VAL HIS TRP TYR GLN SEQRES 4 L 217 GLN LEU PRO GLY THR ALA PRO LYS LEU LEU ILE TYR GLY SEQRES 5 L 217 ASP THR ASN ARG PRO SER GLY VAL PRO ASP ARG PHE SER SEQRES 6 L 217 GLY SER LYS SER GLY THR SER ALA SER LEU ALA ILE SER SEQRES 7 L 217 GLY LEU ARG SER GLU ASP GLU ALA ASP TYR TYR CYS ALA SEQRES 8 L 217 ALA TRP ASP ASP SER LEU ASN GLY PRO VAL PHE GLY GLY SEQRES 9 L 217 GLY THR LYS LEU THR VAL LEU GLY GLN PRO LYS ALA ASN SEQRES 10 L 217 PRO THR VAL THR LEU PHE PRO PRO SER SER GLU GLU LEU SEQRES 11 L 217 GLN ALA ASN LYS ALA THR LEU VAL CYS LEU ILE SER ASP SEQRES 12 L 217 PHE TYR PRO GLY ALA VAL THR VAL ALA TRP LYS ALA ASP SEQRES 13 L 217 GLY SER PRO VAL LYS ALA GLY VAL GLU THR THR LYS PRO SEQRES 14 L 217 SER LYS GLN SER ASN ASN LYS TYR ALA ALA SER SER TYR SEQRES 15 L 217 LEU SER LEU THR PRO GLU GLN TRP LYS SER HIS ARG SER SEQRES 16 L 217 TYR SER CYS GLN VAL THR HIS GLU GLY SER THR VAL GLU SEQRES 17 L 217 LYS THR VAL ALA PRO THR GLU CYS SER HET NAG B 1 14 HET NAG B 2 14 HET NAG A 301 14 HET GOL A 304 6 HET GOL A 305 6 HET PO4 L 301 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM GOL GLYCEROL HETNAM PO4 PHOSPHATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 NAG 3(C8 H15 N O6) FORMUL 6 GOL 2(C3 H8 O3) FORMUL 8 PO4 O4 P 3- FORMUL 9 HOH *105(H2 O) HELIX 1 AA1 ASN A 104 SER A 108 5 5 HELIX 2 AA2 LYS A 156 LYS A 158 5 3 HELIX 3 AA3 ASN A 187 SER A 191 5 5 HELIX 4 AA4 THR H 28 TYR H 32 5 5 HELIX 5 AA5 ARG H 87 THR H 91 5 5 HELIX 6 AA6 SER H 135 LYS H 137 5 3 HELIX 7 AA7 SER H 164 ALA H 166 5 3 HELIX 8 AA8 SER H 195 THR H 199 5 5 HELIX 9 AA9 LYS H 209 ASN H 212 5 4 HELIX 10 AB1 ASN L 28 GLY L 32 5 5 HELIX 11 AB2 ARG L 81 GLU L 85 5 5 HELIX 12 AB3 SER L 126 ALA L 132 1 7 HELIX 13 AB4 THR L 186 SER L 192 1 7 SHEET 1 AA1 4 ASN A 60 LEU A 62 0 SHEET 2 AA1 4 VAL A 124 LEU A 129 1 O LEU A 129 N VAL A 61 SHEET 3 AA1 4 GLY A 109 GLN A 114 -1 N GLY A 109 O LEU A 126 SHEET 4 AA1 4 GLN A 83 HIS A 86 -1 N GLN A 83 O GLN A 114 SHEET 1 AA2 2 SER A 66 THR A 70 0 SHEET 2 AA2 2 SER A 98 LYS A 102 -1 O TYR A 99 N LEU A 69 SHEET 1 AA3 3 LEU A 133 GLN A 136 0 SHEET 2 AA3 3 ILE A 148 SER A 154 -1 O ARG A 151 N GLN A 136 SHEET 3 AA3 3 ASN A 180 ILE A 183 -1 O PHE A 181 N LEU A 150 SHEET 1 AA4 5 GLU A 141 GLN A 143 0 SHEET 2 AA4 5 VAL A 210 GLN A 215 1 O THR A 213 N PHE A 142 SHEET 3 AA4 5 GLY A 192 ILE A 200 -1 N TYR A 194 O VAL A 210 SHEET 4 AA4 5 VAL A 161 GLN A 167 -1 N PHE A 166 O HIS A 195 SHEET 5 AA4 5 LYS A 170 SER A 175 -1 O LYS A 172 N PHE A 165 SHEET 1 AA5 4 GLU A 141 GLN A 143 0 SHEET 2 AA5 4 VAL A 210 GLN A 215 1 O THR A 213 N PHE A 142 SHEET 3 AA5 4 GLY A 192 ILE A 200 -1 N TYR A 194 O VAL A 210 SHEET 4 AA5 4 THR A 203 SER A 206 -1 O TYR A 205 N GLY A 198 SHEET 1 AA6 4 GLN H 3 SER H 7 0 SHEET 2 AA6 4 LEU H 18 SER H 25 -1 O SER H 21 N SER H 7 SHEET 3 AA6 4 THR H 78 MET H 83 -1 O LEU H 81 N LEU H 20 SHEET 4 AA6 4 PHE H 68 ASP H 73 -1 N THR H 69 O GLN H 82 SHEET 1 AA7 6 GLY H 10 VAL H 12 0 SHEET 2 AA7 6 LEU H 116 VAL H 119 1 O THR H 118 N GLY H 10 SHEET 3 AA7 6 ALA H 92 SER H 98 -1 N ALA H 92 O VAL H 117 SHEET 4 AA7 6 ILE H 34 GLN H 39 -1 N VAL H 37 O TYR H 95 SHEET 5 AA7 6 LEU H 45 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 AA7 6 THR H 58 TYR H 60 -1 O TYR H 59 N GLY H 50 SHEET 1 AA8 4 GLY H 10 VAL H 12 0 SHEET 2 AA8 4 LEU H 116 VAL H 119 1 O THR H 118 N GLY H 10 SHEET 3 AA8 4 ALA H 92 SER H 98 -1 N ALA H 92 O VAL H 117 SHEET 4 AA8 4 ILE H 110 TRP H 111 -1 O ILE H 110 N SER H 98 SHEET 1 AA9 4 SER H 128 LEU H 132 0 SHEET 2 AA9 4 THR H 143 TYR H 153 -1 O LEU H 149 N PHE H 130 SHEET 3 AA9 4 TYR H 184 PRO H 193 -1 O LEU H 186 N VAL H 150 SHEET 4 AA9 4 VAL H 171 THR H 173 -1 N HIS H 172 O VAL H 189 SHEET 1 AB1 4 THR H 139 SER H 140 0 SHEET 2 AB1 4 THR H 143 TYR H 153 -1 O THR H 143 N SER H 140 SHEET 3 AB1 4 TYR H 184 PRO H 193 -1 O LEU H 186 N VAL H 150 SHEET 4 AB1 4 VAL H 177 LEU H 178 -1 N VAL H 177 O SER H 185 SHEET 1 AB2 3 THR H 159 TRP H 162 0 SHEET 2 AB2 3 ILE H 203 HIS H 208 -1 O ASN H 205 N SER H 161 SHEET 3 AB2 3 THR H 213 LYS H 218 -1 O VAL H 215 N VAL H 206 SHEET 1 AB3 5 SER L 9 GLY L 12 0 SHEET 2 AB3 5 THR L 106 VAL L 110 1 O THR L 109 N ALA L 10 SHEET 3 AB3 5 ALA L 86 ASP L 94 -1 N ALA L 86 O LEU L 108 SHEET 4 AB3 5 HIS L 36 GLN L 40 -1 N TYR L 38 O TYR L 89 SHEET 5 AB3 5 PRO L 46 ILE L 50 -1 O ILE L 50 N TRP L 37 SHEET 1 AB4 4 SER L 9 GLY L 12 0 SHEET 2 AB4 4 THR L 106 VAL L 110 1 O THR L 109 N ALA L 10 SHEET 3 AB4 4 ALA L 86 ASP L 94 -1 N ALA L 86 O LEU L 108 SHEET 4 AB4 4 GLY L 99 PHE L 102 -1 O VAL L 101 N ALA L 92 SHEET 1 AB5 3 VAL L 18 THR L 23 0 SHEET 2 AB5 3 SER L 72 ILE L 77 -1 O ILE L 77 N VAL L 18 SHEET 3 AB5 3 PHE L 64 SER L 69 -1 N SER L 65 O ALA L 76 SHEET 1 AB6 4 THR L 119 PHE L 123 0 SHEET 2 AB6 4 ALA L 135 PHE L 144 -1 O LEU L 140 N THR L 121 SHEET 3 AB6 4 TYR L 177 LEU L 185 -1 O SER L 181 N CYS L 139 SHEET 4 AB6 4 VAL L 164 THR L 166 -1 N GLU L 165 O TYR L 182 SHEET 1 AB7 4 THR L 119 PHE L 123 0 SHEET 2 AB7 4 ALA L 135 PHE L 144 -1 O LEU L 140 N THR L 121 SHEET 3 AB7 4 TYR L 177 LEU L 185 -1 O SER L 181 N CYS L 139 SHEET 4 AB7 4 SER L 170 LYS L 171 -1 N SER L 170 O ALA L 178 SHEET 1 AB8 4 SER L 158 VAL L 160 0 SHEET 2 AB8 4 THR L 150 ALA L 155 -1 N ALA L 155 O SER L 158 SHEET 3 AB8 4 TYR L 196 HIS L 202 -1 O SER L 197 N LYS L 154 SHEET 4 AB8 4 SER L 205 VAL L 211 -1 O VAL L 207 N VAL L 200 SSBOND 1 CYS A 71 CYS A 113 1555 1555 2.06 SSBOND 2 CYS A 152 CYS A 196 1555 1555 2.16 SSBOND 3 CYS H 22 CYS H 96 1555 1555 2.15 SSBOND 4 CYS H 148 CYS H 204 1555 1555 2.12 SSBOND 5 CYS L 22 CYS L 90 1555 1555 2.12 SSBOND 6 CYS L 139 CYS L 198 1555 1555 2.11 LINK ND2 ASN A 106 C1 NAG A 301 1555 1555 1.45 LINK ND2 ASN A 187 C1 NAG B 1 1555 1555 1.43 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.46 CISPEP 1 GLU A 55 PRO A 56 0 -8.52 CISPEP 2 PHE H 154 PRO H 155 0 -11.91 CISPEP 3 GLU H 156 PRO H 157 0 1.61 CISPEP 4 TYR L 145 PRO L 146 0 -2.36 CRYST1 70.230 75.020 134.950 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014239 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013330 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007410 0.00000