HEADER HYDROLASE 11-JUL-17 5OFK TITLE CRYSTAL STRUCTURE OF CBXYN10C VARIANT E140Q/E248Q COMPLEXED WITH TITLE 2 XYLOHEPTAOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOSIDE HYDROLASE FAMILY 48; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CALDICELLULOSIRUPTOR BESCII (STRAIN ATCC BAA- SOURCE 3 1888 / DSM 6725 / Z-1320); SOURCE 4 ORGANISM_TAXID: 521460; SOURCE 5 GENE: ATHE_1857; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS XYLANASE, GH10 FAMILY, CELLULASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR N.HAKULINEN,L.PENTTINEN,J.ROUVINEN,T.TU REVDAT 5 08-MAY-24 5OFK 1 HETSYN LINK REVDAT 4 29-JUL-20 5OFK 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 06-DEC-17 5OFK 1 JRNL REVDAT 2 18-OCT-17 5OFK 1 JRNL REVDAT 1 04-OCT-17 5OFK 0 JRNL AUTH Y.CHU,T.TU,L.PENTTINEN,X.XUE,X.WANG,Z.YI,L.GONG,J.ROUVINEN, JRNL AUTH 2 H.LUO,N.HAKULINEN,B.YAO,X.SU JRNL TITL INSIGHTS INTO THE ROLES OF NON-CATALYTIC RESIDUES IN THE JRNL TITL 2 ACTIVE SITE OF A GH10 XYLANASE WITH ACTIVITY ON CELLULOSE. JRNL REF J. BIOL. CHEM. V. 292 19315 2017 JRNL REFN ESSN 1083-351X JRNL PMID 28974575 JRNL DOI 10.1074/JBC.M117.807768 REMARK 2 REMARK 2 RESOLUTION. 1.16 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11_2567: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.16 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 53.77 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 162125 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.870 REMARK 3 FREE R VALUE TEST SET COUNT : 7892 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 53.8274 - 3.6033 0.95 5286 253 0.1269 0.1340 REMARK 3 2 3.6033 - 2.8601 0.99 5307 274 0.1218 0.1315 REMARK 3 3 2.8601 - 2.4985 0.99 5223 271 0.1201 0.1362 REMARK 3 4 2.4985 - 2.2701 1.00 5265 268 0.1134 0.1395 REMARK 3 5 2.2701 - 2.1074 1.00 5231 270 0.1176 0.1285 REMARK 3 6 2.1074 - 1.9831 1.00 5197 299 0.1227 0.1425 REMARK 3 7 1.9831 - 1.8838 1.00 5222 256 0.1361 0.1491 REMARK 3 8 1.8838 - 1.8018 1.00 5228 258 0.1500 0.1659 REMARK 3 9 1.8018 - 1.7324 1.00 5247 219 0.1656 0.1867 REMARK 3 10 1.7324 - 1.6726 1.00 5212 253 0.1762 0.1945 REMARK 3 11 1.6726 - 1.6203 1.00 5140 274 0.1877 0.2080 REMARK 3 12 1.6203 - 1.5740 1.00 5184 265 0.1812 0.2153 REMARK 3 13 1.5740 - 1.5326 1.00 5194 260 0.2129 0.2229 REMARK 3 14 1.5326 - 1.4952 0.99 5151 259 0.2254 0.2452 REMARK 3 15 1.4952 - 1.4612 1.00 5155 272 0.2372 0.2629 REMARK 3 16 1.4612 - 1.4301 1.00 5181 244 0.2523 0.2714 REMARK 3 17 1.4301 - 1.4015 1.00 5150 240 0.2651 0.2947 REMARK 3 18 1.4015 - 1.3750 0.99 5139 301 0.2741 0.2635 REMARK 3 19 1.3750 - 1.3505 1.00 5137 275 0.2633 0.2552 REMARK 3 20 1.3505 - 1.3276 0.99 5149 249 0.2920 0.3099 REMARK 3 21 1.3276 - 1.3062 0.99 5130 250 0.3131 0.3347 REMARK 3 22 1.3062 - 1.2861 0.99 5122 264 0.3073 0.2967 REMARK 3 23 1.2861 - 1.2671 0.99 5111 281 0.2997 0.3234 REMARK 3 24 1.2671 - 1.2493 0.99 5103 276 0.3094 0.3111 REMARK 3 25 1.2493 - 1.2324 0.99 5157 264 0.3133 0.2992 REMARK 3 26 1.2324 - 1.2164 0.99 5085 288 0.3006 0.3356 REMARK 3 27 1.2164 - 1.2012 1.00 5143 252 0.3026 0.3360 REMARK 3 28 1.2012 - 1.1867 0.98 5058 266 0.3058 0.2856 REMARK 3 29 1.1867 - 1.1729 0.95 4814 252 0.3207 0.3492 REMARK 3 30 1.1729 - 1.1597 0.87 4512 239 0.3368 0.3374 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.190 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3239 REMARK 3 ANGLE : 1.077 4441 REMARK 3 CHIRALITY : 0.084 469 REMARK 3 PLANARITY : 0.008 562 REMARK 3 DIHEDRAL : 15.030 1200 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 15.9468 136.5464 60.6340 REMARK 3 T TENSOR REMARK 3 T11: 0.0753 T22: 0.0849 REMARK 3 T33: 0.0824 T12: -0.0007 REMARK 3 T13: 0.0026 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 0.3564 L22: 0.3922 REMARK 3 L33: 0.4328 L12: -0.0554 REMARK 3 L13: -0.0627 L23: 0.0550 REMARK 3 S TENSOR REMARK 3 S11: 0.0222 S12: 0.0094 S13: 0.0105 REMARK 3 S21: 0.0099 S22: -0.0182 S23: -0.0078 REMARK 3 S31: 0.0012 S32: 0.0133 S33: -0.0017 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5OFK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1200005693. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976251 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 162835 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.160 REMARK 200 RESOLUTION RANGE LOW (A) : 53.770 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.16 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG8000, 0.2 M AMMONIUM SULPHATE, REMARK 280 0.1 M PIPES AT PH 7.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 91.80550 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 91.80550 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 28.11750 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 91.80550 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 91.80550 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 28.11750 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 91.80550 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 91.80550 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 28.11750 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 91.80550 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 91.80550 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 28.11750 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 91.80550 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 91.80550 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 28.11750 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 91.80550 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 91.80550 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 28.11750 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 91.80550 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 91.80550 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 28.11750 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 91.80550 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 91.80550 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 28.11750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -83.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 645 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 802 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 931 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 977 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1005 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1032 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1048 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ3 LYS A -1 O HOH A 517 1.38 REMARK 500 HZ2 LYS A 234 O HOH A 520 1.45 REMARK 500 HD22 ASN A 145 O HOH A 510 1.48 REMARK 500 O HOH A 632 O HOH A 796 1.88 REMARK 500 O HOH A 782 O HOH A 878 1.92 REMARK 500 O HOH A 873 O HOH A 933 1.94 REMARK 500 O HOH A 991 O HOH A 1057 1.96 REMARK 500 O HOH A 555 O HOH A 715 1.97 REMARK 500 O HOH A 730 O HOH A 827 1.97 REMARK 500 OE1 GLN A 146 O HOH A 505 1.98 REMARK 500 O HOH A 506 O HOH A 926 1.98 REMARK 500 O2 SO4 A 402 O HOH A 506 1.99 REMARK 500 OD1 ASP A 111 O HOH A 507 1.99 REMARK 500 OXT SER A 336 O HOH A 508 2.00 REMARK 500 O HOH A 1029 O HOH A 1056 2.02 REMARK 500 OE2 GLU A 10 O HOH A 509 2.02 REMARK 500 O HOH A 964 O HOH A 1040 2.03 REMARK 500 O HOH A 545 O HOH A 571 2.04 REMARK 500 O HOH A 899 O HOH A 1040 2.05 REMARK 500 O HOH A 946 O HOH A 1057 2.06 REMARK 500 ND2 ASN A 145 O HOH A 510 2.08 REMARK 500 OE1 GLN A 275 O HOH A 511 2.08 REMARK 500 O HOH A 830 O HOH A 948 2.10 REMARK 500 ND2 ASN A 261 O HOH A 514 2.13 REMARK 500 O HOH A 970 O HOH A 1011 2.14 REMARK 500 O HOH A 829 O HOH A 881 2.15 REMARK 500 O HOH A 828 O HOH A 910 2.16 REMARK 500 OE2 GLU A 157 O HOH A 515 2.16 REMARK 500 O HOH A 976 O HOH A 1039 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 157 O HOH A 620 5557 1.81 REMARK 500 O HOH A 888 O HOH A 968 8667 1.93 REMARK 500 O HOH A 836 O HOH A 1031 5557 1.95 REMARK 500 O HOH A 988 O HOH A 988 8667 1.96 REMARK 500 O HOH A 520 O HOH A 852 8667 2.04 REMARK 500 O HOH A 509 O HOH A 586 15457 2.12 REMARK 500 OE2 GLU A 157 O HOH A 1041 5557 2.14 REMARK 500 O HOH A 749 O HOH A 1053 5558 2.16 REMARK 500 O HOH A 514 O HOH A 926 5557 2.17 REMARK 500 O4 XYP B 7 O HOH A 880 5557 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 193 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 248 44.13 -145.03 REMARK 500 LEU A 317 -156.61 -118.66 REMARK 500 TYR A 323 -1.86 76.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1069 DISTANCE = 5.85 ANGSTROMS DBREF 5OFK A 1 336 UNP B9MKT7 B9MKT7_CALBD 38 373 SEQADV 5OFK ASP A -2 UNP B9MKT7 EXPRESSION TAG SEQADV 5OFK LYS A -1 UNP B9MKT7 EXPRESSION TAG SEQADV 5OFK MET A 0 UNP B9MKT7 EXPRESSION TAG SEQADV 5OFK GLN A 140 UNP B9MKT7 GLU 177 ENGINEERED MUTATION SEQADV 5OFK GLN A 248 UNP B9MKT7 GLU 285 ENGINEERED MUTATION SEQADV 5OFK LEU A 319 UNP B9MKT7 PHE 356 CONFLICT SEQRES 1 A 339 ASP LYS MET PRO ASP TRP ASN ILE PRO SER LEU TYR GLU SEQRES 2 A 339 SER TYR LYS ASN ASP PHE ARG ILE GLY VAL ALA ILE PRO SEQRES 3 A 339 ALA LYS CYS LEU SER ASN ASP THR ASP ARG ARG MET VAL SEQRES 4 A 339 LEU LYS HIS PHE ASN SER ILE THR ALA GLU ASN GLU MET SEQRES 5 A 339 LYS PRO GLU SER LEU LEU ALA GLY GLN THR SER THR GLY SEQRES 6 A 339 LEU ASN TYR ARG PHE SER THR ALA ASP THR PHE VAL ASP SEQRES 7 A 339 PHE ALA ASN THR ASN ASN ILE GLY ILE ARG GLY HIS THR SEQRES 8 A 339 LEU VAL TRP HIS SER GLN THR PRO ASP TRP PHE PHE LYS SEQRES 9 A 339 ASP SER SER GLY GLN ARG LEU THR LYS ASP ALA LEU LEU SEQRES 10 A 339 ALA ARG LEU LYS GLN TYR ILE TYR ASP VAL VAL GLY ARG SEQRES 11 A 339 TYR LYS GLY LYS VAL TYR ALA TRP ASP VAL VAL ASN GLN SEQRES 12 A 339 ALA ILE ASP GLU ASN GLN SER ASP GLY TYR ARG ARG SER SEQRES 13 A 339 THR TRP TYR GLU ILE CYS GLY PRO GLU TYR ILE GLU LYS SEQRES 14 A 339 ALA PHE ILE TRP ALA HIS GLU ALA ASP PRO ASN ALA LYS SEQRES 15 A 339 LEU PHE TYR ASN ASP TYR ASN THR GLU ILE SER LYS LYS SEQRES 16 A 339 ARG ASP PHE ILE TYR ASN MET VAL LYS ASN LEU LYS SER SEQRES 17 A 339 LYS GLY ILE PRO ILE HIS GLY ILE GLY MET GLN CYS HIS SEQRES 18 A 339 ILE ASN VAL ASN TRP PRO SER VAL SER GLU ILE GLU ASN SEQRES 19 A 339 SER ILE LYS LEU PHE SER SER ILE PRO GLY ILE GLU ILE SEQRES 20 A 339 HIS ILE THR GLN LEU ASP MET SER LEU TYR ASN TYR GLY SEQRES 21 A 339 SER SER GLU ASN TYR SER THR PRO PRO GLN ASP LEU LEU SEQRES 22 A 339 GLN LYS GLN ALA GLN LYS TYR LYS GLU LEU PHE THR MET SEQRES 23 A 339 LEU LYS LYS TYR THR ASN VAL VAL LYS CYS VAL THR PHE SEQRES 24 A 339 TRP GLY LEU LYS ASP ASP TYR SER TRP LEU ARG SER PHE SEQRES 25 A 339 ASN GLY LYS ASN ASP TRP PRO LEU LEU LEU PHE GLU ASP SEQRES 26 A 339 TYR SER ALA LYS PRO ALA TYR TRP ALA VAL ILE GLU ALA SEQRES 27 A 339 SER HET XYP B 1 19 HET XYP B 2 17 HET XYP B 3 17 HET XYP B 4 16 HET XYP B 5 17 HET XYP B 6 17 HET XYP B 7 18 HET SO4 A 401 10 HET SO4 A 402 5 HET SO4 A 403 5 HET SO4 A 404 5 HET MPD A 405 22 HET MPD A 406 22 HET PIN A 407 34 HETNAM XYP BETA-D-XYLOPYRANOSE HETNAM SO4 SULFATE ION HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM PIN PIPERAZINE-N,N'-BIS(2-ETHANESULFONIC ACID) HETSYN XYP BETA-D-XYLOSE; D-XYLOSE; XYLOSE HETSYN PIN PIPES; 1,4-PIPERAZINEDIETHANESULFONIC ACID FORMUL 2 XYP 7(C5 H10 O5) FORMUL 3 SO4 4(O4 S 2-) FORMUL 7 MPD 2(C6 H14 O2) FORMUL 9 PIN C8 H18 N2 O6 S2 FORMUL 10 HOH *569(H2 O) HELIX 1 AA1 SER A 7 TYR A 12 1 6 HELIX 2 AA2 PRO A 23 SER A 28 5 6 HELIX 3 AA3 ASN A 29 PHE A 40 1 12 HELIX 4 AA4 LYS A 50 LEU A 54 1 5 HELIX 5 AA5 PHE A 67 ASN A 80 1 14 HELIX 6 AA6 PRO A 96 LYS A 101 5 6 HELIX 7 AA7 THR A 109 TYR A 128 1 20 HELIX 8 AA8 SER A 153 GLY A 160 1 8 HELIX 9 AA9 PRO A 161 ASP A 175 1 15 HELIX 10 AB1 ILE A 189 LYS A 206 1 18 HELIX 11 AB2 SER A 225 SER A 237 1 13 HELIX 12 AB3 PRO A 266 LYS A 285 1 20 HELIX 13 AB4 LYS A 286 THR A 288 5 3 HELIX 14 AB5 LYS A 300 SER A 304 5 5 HELIX 15 AB6 TRP A 305 GLY A 311 1 7 HELIX 16 AB7 LYS A 326 SER A 336 1 11 SHEET 1 AA110 HIS A 218 ASN A 220 0 SHEET 2 AA110 GLU A 243 SER A 252 1 O ASP A 250 N ILE A 219 SHEET 3 AA110 VAL A 291 PHE A 296 1 O THR A 295 N ILE A 246 SHEET 4 AA110 ARG A 17 ILE A 22 1 N GLY A 19 O PHE A 296 SHEET 5 AA110 SER A 42 ALA A 45 1 O THR A 44 N ILE A 22 SHEET 6 AA110 GLY A 83 TRP A 91 1 O ARG A 85 N ILE A 43 SHEET 7 AA110 ALA A 134 ASN A 139 1 O ALA A 134 N GLY A 86 SHEET 8 AA110 LYS A 179 ASP A 184 1 O PHE A 181 N TRP A 135 SHEET 9 AA110 GLY A 212 MET A 215 1 O GLY A 214 N TYR A 182 SHEET 10 AA110 GLU A 243 SER A 252 1 O HIS A 245 N MET A 215 SHEET 1 AA2 2 LEU A 55 THR A 59 0 SHEET 2 AA2 2 GLY A 62 TYR A 65 -1 O ASN A 64 N GLY A 57 LINK O4 XYP B 1 C1 XYP B 2 1555 1555 1.40 LINK O4 XYP B 2 C1 XYP B 3 1555 1555 1.42 LINK O4 XYP B 3 C1 XYP B 4 1555 1555 1.43 LINK O4 XYP B 4 C1 XYP B 5 1555 1555 1.44 LINK O4 XYP B 5 C1 XYP B 6 1555 1555 1.40 LINK O4 XYP B 6 C1 XYP B 7 1555 1555 1.35 CISPEP 1 HIS A 87 THR A 88 0 4.39 CISPEP 2 TRP A 223 PRO A 224 0 -8.92 CRYST1 183.611 183.611 56.235 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005446 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005446 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017783 0.00000