HEADER TRANSCRIPTION 17-JUL-17 5OHO TITLE CRYSTAL STRUCTURE OF THE KOWX-KOW4 DOMAIN OF HUMAN DSIF COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTION ELONGATION FACTOR SPT5; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: HSPT5,DRB SENSITIVITY-INDUCING FACTOR 160 KDA SUBUNIT,DSIF COMPND 5 P160,DRB SENSITIVITY-INDUCING FACTOR LARGE SUBUNIT,DSIF LARGE COMPND 6 SUBUNIT,TAT-COTRANSACTIVATOR 1 PROTEIN,TAT-CT1 PROTEIN; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SUPT5H, SPT5, SPT5H; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VARIANT: RIL KEYWDS RNA POLYMERASE II, TRANSCRIPTION ELONGATION, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR C.BERNECKY,J.M.PLITZKO,P.CRAMER REVDAT 5 08-MAY-24 5OHO 1 REMARK REVDAT 4 06-NOV-19 5OHO 1 REMARK REVDAT 3 18-OCT-17 5OHO 1 JRNL REVDAT 2 20-SEP-17 5OHO 1 JRNL REVDAT 1 13-SEP-17 5OHO 0 JRNL AUTH C.BERNECKY,J.M.PLITZKO,P.CRAMER JRNL TITL STRUCTURE OF A TRANSCRIBING RNA POLYMERASE II-DSIF COMPLEX JRNL TITL 2 REVEALS A MULTIDENTATE DNA-RNA CLAMP. JRNL REF NAT. STRUCT. MOL. BIOL. V. 24 809 2017 JRNL REFN ESSN 1545-9985 JRNL PMID 28892040 JRNL DOI 10.1038/NSMB.3465 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 50852 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.930 REMARK 3 FREE R VALUE TEST SET COUNT : 2507 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.6518 - 4.1951 1.00 2678 141 0.1538 0.1949 REMARK 3 2 4.1951 - 3.3301 1.00 2719 122 0.1286 0.1695 REMARK 3 3 3.3301 - 2.9093 1.00 2686 157 0.1627 0.2030 REMARK 3 4 2.9093 - 2.6433 1.00 2698 119 0.1860 0.2441 REMARK 3 5 2.6433 - 2.4539 1.00 2694 143 0.2092 0.2691 REMARK 3 6 2.4539 - 2.3092 1.00 2676 162 0.2039 0.2507 REMARK 3 7 2.3092 - 2.1936 1.00 2709 114 0.1943 0.2525 REMARK 3 8 2.1936 - 2.0981 1.00 2690 127 0.1840 0.2024 REMARK 3 9 2.0981 - 2.0173 1.00 2710 128 0.1842 0.2039 REMARK 3 10 2.0173 - 1.9477 1.00 2716 144 0.1907 0.2296 REMARK 3 11 1.9477 - 1.8868 1.00 2649 164 0.2074 0.2863 REMARK 3 12 1.8868 - 1.8329 1.00 2709 137 0.2328 0.3258 REMARK 3 13 1.8329 - 1.7846 1.00 2671 141 0.2444 0.2769 REMARK 3 14 1.7846 - 1.7411 1.00 2688 128 0.2576 0.3204 REMARK 3 15 1.7411 - 1.7015 1.00 2698 142 0.2643 0.2883 REMARK 3 16 1.7015 - 1.6653 1.00 2720 136 0.2899 0.2984 REMARK 3 17 1.6653 - 1.6320 1.00 2675 144 0.3252 0.3598 REMARK 3 18 1.6320 - 1.6012 0.96 2559 158 0.3371 0.3922 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.550 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.67 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1917 REMARK 3 ANGLE : 0.862 2586 REMARK 3 CHIRALITY : 0.057 287 REMARK 3 PLANARITY : 0.005 335 REMARK 3 DIHEDRAL : 18.149 1158 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 534 THROUGH 553 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.7027 64.7256 22.8543 REMARK 3 T TENSOR REMARK 3 T11: 0.2911 T22: 0.2818 REMARK 3 T33: 0.2973 T12: 0.0289 REMARK 3 T13: -0.0716 T23: -0.0288 REMARK 3 L TENSOR REMARK 3 L11: 1.6993 L22: 2.3903 REMARK 3 L33: 1.2087 L12: 1.2923 REMARK 3 L13: -0.7162 L23: 0.5413 REMARK 3 S TENSOR REMARK 3 S11: 0.0802 S12: 0.0951 S13: -0.2758 REMARK 3 S21: -0.2617 S22: 0.1182 S23: -0.1443 REMARK 3 S31: -0.2608 S32: 0.0368 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 554 THROUGH 574 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.5635 66.2389 21.3771 REMARK 3 T TENSOR REMARK 3 T11: 0.2741 T22: 0.4026 REMARK 3 T33: 0.3162 T12: 0.0052 REMARK 3 T13: -0.0108 T23: -0.0190 REMARK 3 L TENSOR REMARK 3 L11: 0.9783 L22: 1.3642 REMARK 3 L33: 1.2900 L12: -0.0767 REMARK 3 L13: -0.4805 L23: -0.8100 REMARK 3 S TENSOR REMARK 3 S11: 0.0434 S12: 0.6780 S13: 0.1180 REMARK 3 S21: -0.2106 S22: -0.0015 S23: -0.3255 REMARK 3 S31: -0.2510 S32: 0.6816 S33: -0.0002 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 575 THROUGH 584 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.0164 64.4980 27.3113 REMARK 3 T TENSOR REMARK 3 T11: 0.4309 T22: 0.3961 REMARK 3 T33: 0.4412 T12: -0.0430 REMARK 3 T13: -0.0198 T23: -0.0245 REMARK 3 L TENSOR REMARK 3 L11: 0.1250 L22: 0.3080 REMARK 3 L33: 0.0716 L12: 0.2612 REMARK 3 L13: -0.0358 L23: -0.1840 REMARK 3 S TENSOR REMARK 3 S11: 0.1964 S12: -0.2661 S13: 0.6639 REMARK 3 S21: 0.5720 S22: -0.1315 S23: 0.4611 REMARK 3 S31: 0.2178 S32: 0.0194 S33: -0.0021 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 585 THROUGH 617 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.4602 49.7577 17.2323 REMARK 3 T TENSOR REMARK 3 T11: 0.4446 T22: 0.2984 REMARK 3 T33: 0.3117 T12: 0.0353 REMARK 3 T13: -0.0678 T23: -0.0115 REMARK 3 L TENSOR REMARK 3 L11: 1.6741 L22: 2.8620 REMARK 3 L33: 1.7815 L12: 0.2251 REMARK 3 L13: 0.1517 L23: 1.1514 REMARK 3 S TENSOR REMARK 3 S11: 0.0980 S12: 0.2670 S13: -0.3970 REMARK 3 S21: 0.3249 S22: 0.1067 S23: -0.2601 REMARK 3 S31: 0.5472 S32: 0.1426 S33: -0.0009 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 618 THROUGH 646 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.4172 52.6342 17.1767 REMARK 3 T TENSOR REMARK 3 T11: 0.3592 T22: 0.3117 REMARK 3 T33: 0.3896 T12: 0.1019 REMARK 3 T13: -0.1080 T23: -0.0563 REMARK 3 L TENSOR REMARK 3 L11: 2.1131 L22: 1.9708 REMARK 3 L33: 2.2773 L12: 2.0112 REMARK 3 L13: 0.0220 L23: 0.6878 REMARK 3 S TENSOR REMARK 3 S11: 0.1838 S12: 0.3737 S13: -0.3080 REMARK 3 S21: 0.1845 S22: 0.1699 S23: -0.6831 REMARK 3 S31: 0.4901 S32: 0.5037 S33: 0.0295 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 534 THROUGH 574 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.7048 60.1330 37.7925 REMARK 3 T TENSOR REMARK 3 T11: 0.1765 T22: 0.3280 REMARK 3 T33: 0.2834 T12: -0.0121 REMARK 3 T13: 0.0029 T23: -0.0778 REMARK 3 L TENSOR REMARK 3 L11: 4.2144 L22: 4.3306 REMARK 3 L33: 3.0584 L12: 2.0111 REMARK 3 L13: -0.3800 L23: 2.3411 REMARK 3 S TENSOR REMARK 3 S11: -0.0629 S12: 0.0188 S13: 0.2825 REMARK 3 S21: -0.5283 S22: -0.1017 S23: -0.0401 REMARK 3 S31: -0.1468 S32: -0.0014 S33: -0.0043 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 575 THROUGH 584 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.7904 46.8594 30.3823 REMARK 3 T TENSOR REMARK 3 T11: 0.7475 T22: 0.3813 REMARK 3 T33: 0.4442 T12: -0.0486 REMARK 3 T13: -0.1447 T23: -0.0285 REMARK 3 L TENSOR REMARK 3 L11: 1.0031 L22: 0.4662 REMARK 3 L33: 0.0668 L12: -0.7903 REMARK 3 L13: -0.3682 L23: 0.2740 REMARK 3 S TENSOR REMARK 3 S11: 0.3535 S12: 0.2975 S13: -0.6039 REMARK 3 S21: -0.0228 S22: 0.2500 S23: -0.7759 REMARK 3 S31: 1.1701 S32: 0.2589 S33: 0.0022 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 585 THROUGH 625 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.6075 44.2976 36.7247 REMARK 3 T TENSOR REMARK 3 T11: 0.2753 T22: 0.2333 REMARK 3 T33: 0.2148 T12: -0.0277 REMARK 3 T13: -0.0036 T23: 0.0089 REMARK 3 L TENSOR REMARK 3 L11: 3.6001 L22: 3.0735 REMARK 3 L33: 3.8996 L12: 1.9657 REMARK 3 L13: -0.1559 L23: 2.5608 REMARK 3 S TENSOR REMARK 3 S11: -0.1826 S12: 0.1194 S13: -0.2589 REMARK 3 S21: 0.0218 S22: -0.0441 S23: 0.1046 REMARK 3 S31: 0.2537 S32: -0.1433 S33: -0.0003 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 626 THROUGH 630 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.3071 57.0754 32.1734 REMARK 3 T TENSOR REMARK 3 T11: 0.4378 T22: 0.3540 REMARK 3 T33: 0.6655 T12: 0.0024 REMARK 3 T13: -0.1974 T23: 0.0434 REMARK 3 L TENSOR REMARK 3 L11: 0.0291 L22: 0.0502 REMARK 3 L33: 0.1466 L12: -0.0077 REMARK 3 L13: -0.0562 L23: -0.0061 REMARK 3 S TENSOR REMARK 3 S11: -0.1413 S12: -0.5745 S13: -0.9396 REMARK 3 S21: -0.3155 S22: 0.8041 S23: 0.6355 REMARK 3 S31: -0.1998 S32: -0.5858 S33: 0.0033 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 631 THROUGH 646 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.8286 48.6842 39.0040 REMARK 3 T TENSOR REMARK 3 T11: 0.3206 T22: 0.2821 REMARK 3 T33: 0.3271 T12: -0.0178 REMARK 3 T13: -0.0489 T23: -0.0160 REMARK 3 L TENSOR REMARK 3 L11: 1.8739 L22: 1.0183 REMARK 3 L33: 0.8414 L12: 0.1344 REMARK 3 L13: -0.4904 L23: 0.8472 REMARK 3 S TENSOR REMARK 3 S11: -0.3398 S12: -0.0958 S13: 0.2461 REMARK 3 S21: -0.2386 S22: 0.0677 S23: 0.1447 REMARK 3 S31: 0.1212 S32: -0.4423 S33: -0.0002 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5OHO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1200005824. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00003056744 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50856 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 43.635 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.760 REMARK 200 R MERGE (I) : 0.04700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.8800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.47 REMARK 200 R MERGE FOR SHELL (I) : 1.33600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.940 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CACODYLATE PH 6.5, 1.0 M REMARK 280 TRI-SODIUM CITRATE DIHYDRATE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.14300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.53250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.20150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 36.53250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.14300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 27.20150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 840 O HOH B 875 2.08 REMARK 500 O HOH A 854 O HOH A 913 2.10 REMARK 500 OD1 ASP A 580 O HOH A 801 2.11 REMARK 500 O HOH A 896 O HOH B 897 2.16 REMARK 500 O HOH B 820 O HOH B 860 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG A 577 OG1 THR B 569 4576 2.08 REMARK 500 O HOH B 879 O HOH B 898 4566 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 597 -10.20 88.01 REMARK 500 LYS B 597 -8.25 85.16 REMARK 500 ARG B 619 -119.95 46.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 703 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-3815 RELATED DB: EMDB REMARK 900 RELATED ID: 5OHQ RELATED DB: PDB REMARK 900 RELATED ID: 5OIK RELATED DB: PDB REMARK 900 RELATED ID: EMD-3816 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-3818 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-3819 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-3817 RELATED DB: EMDB DBREF 5OHO A 536 646 UNP O00267 SPT5H_HUMAN 536 646 DBREF 5OHO B 536 646 UNP O00267 SPT5H_HUMAN 536 646 SEQADV 5OHO GLY A 534 UNP O00267 EXPRESSION TAG SEQADV 5OHO PRO A 535 UNP O00267 EXPRESSION TAG SEQADV 5OHO GLY B 534 UNP O00267 EXPRESSION TAG SEQADV 5OHO PRO B 535 UNP O00267 EXPRESSION TAG SEQRES 1 A 113 GLY PRO TRP GLY GLU LEU VAL GLN LEU ASP PRO GLN THR SEQRES 2 A 113 VAL GLY VAL ILE VAL ARG LEU GLU ARG GLU THR PHE GLN SEQRES 3 A 113 VAL LEU ASN MET TYR GLY LYS VAL VAL THR VAL ARG HIS SEQRES 4 A 113 GLN ALA VAL THR ARG LYS LYS ASP ASN ARG PHE ALA VAL SEQRES 5 A 113 ALA LEU ASP SER GLU GLN ASN ASN ILE HIS VAL LYS ASP SEQRES 6 A 113 ILE VAL LYS VAL ILE ASP GLY PRO HIS SER GLY ARG GLU SEQRES 7 A 113 GLY GLU ILE ARG HIS LEU PHE ARG SER PHE ALA PHE LEU SEQRES 8 A 113 HIS CYS LYS LYS LEU VAL GLU ASN GLY GLY MET PHE VAL SEQRES 9 A 113 CYS LYS THR ARG HIS LEU VAL LEU ALA SEQRES 1 B 113 GLY PRO TRP GLY GLU LEU VAL GLN LEU ASP PRO GLN THR SEQRES 2 B 113 VAL GLY VAL ILE VAL ARG LEU GLU ARG GLU THR PHE GLN SEQRES 3 B 113 VAL LEU ASN MET TYR GLY LYS VAL VAL THR VAL ARG HIS SEQRES 4 B 113 GLN ALA VAL THR ARG LYS LYS ASP ASN ARG PHE ALA VAL SEQRES 5 B 113 ALA LEU ASP SER GLU GLN ASN ASN ILE HIS VAL LYS ASP SEQRES 6 B 113 ILE VAL LYS VAL ILE ASP GLY PRO HIS SER GLY ARG GLU SEQRES 7 B 113 GLY GLU ILE ARG HIS LEU PHE ARG SER PHE ALA PHE LEU SEQRES 8 B 113 HIS CYS LYS LYS LEU VAL GLU ASN GLY GLY MET PHE VAL SEQRES 9 B 113 CYS LYS THR ARG HIS LEU VAL LEU ALA HET GOL A 701 6 HET GOL A 702 6 HET GOL B 701 6 HET GOL B 702 6 HET CL B 703 1 HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 4(C3 H8 O3) FORMUL 7 CL CL 1- FORMUL 8 HOH *254(H2 O) HELIX 1 AA1 GLN A 573 VAL A 575 5 3 HELIX 2 AA2 VAL A 630 GLY A 633 5 4 HELIX 3 AA3 GLN B 573 VAL B 575 5 3 HELIX 4 AA4 VAL B 630 GLY B 633 5 4 SHEET 1 AA1 5 VAL A 567 ARG A 571 0 SHEET 2 AA1 5 THR A 557 ASN A 562 -1 N VAL A 560 O VAL A 568 SHEET 3 AA1 5 VAL A 547 LEU A 553 -1 N VAL A 551 O GLN A 559 SHEET 4 AA1 5 LEU A 539 GLN A 541 -1 N VAL A 540 O GLY A 548 SHEET 5 AA1 5 THR A 576 ARG A 577 -1 O THR A 576 N GLN A 541 SHEET 1 AA2 2 VAL A 585 LEU A 587 0 SHEET 2 AA2 2 ASN A 593 HIS A 595 -1 O ILE A 594 N ALA A 586 SHEET 1 AA3 5 MET A 635 LYS A 639 0 SHEET 2 AA3 5 PHE A 621 HIS A 625 -1 N LEU A 624 O PHE A 636 SHEET 3 AA3 5 GLU A 611 LEU A 617 -1 N HIS A 616 O PHE A 623 SHEET 4 AA3 5 ILE A 599 VAL A 602 -1 N VAL A 600 O GLY A 612 SHEET 5 AA3 5 LEU A 643 LEU A 645 -1 O VAL A 644 N LYS A 601 SHEET 1 AA4 4 LEU B 539 ASP B 543 0 SHEET 2 AA4 4 THR B 546 LEU B 553 -1 O GLY B 548 N VAL B 540 SHEET 3 AA4 4 THR B 557 ASN B 562 -1 O LEU B 561 N VAL B 549 SHEET 4 AA4 4 VAL B 567 ARG B 571 -1 O VAL B 570 N PHE B 558 SHEET 1 AA5 5 MET B 635 LYS B 639 0 SHEET 2 AA5 5 PHE B 621 HIS B 625 -1 N LEU B 624 O PHE B 636 SHEET 3 AA5 5 GLU B 611 PHE B 618 -1 N ARG B 615 O PHE B 623 SHEET 4 AA5 5 ILE B 599 VAL B 602 -1 N VAL B 600 O GLY B 612 SHEET 5 AA5 5 LEU B 643 LEU B 645 -1 O VAL B 644 N LYS B 601 SITE 1 AC1 6 LYS A 579 ASP A 580 ASN A 581 PHE A 583 SITE 2 AC1 6 HOH A 877 HOH B 806 SITE 1 AC2 8 ASN A 581 ALA A 584 VAL A 585 PHE A 618 SITE 2 AC2 8 ARG A 619 HOH A 802 HOH A 849 HOH A 864 SITE 1 AC3 7 LYS B 578 LYS B 601 PHE B 618 ARG B 619 SITE 2 AC3 7 LEU B 645 ALA B 646 HOH B 813 SITE 1 AC4 8 MET B 563 TYR B 564 PRO B 606 PHE B 621 SITE 2 AC4 8 VAL B 637 LYS B 639 HOH B 803 HOH B 836 SITE 1 AC5 2 ARG B 641 HIS B 642 CRYST1 50.286 54.403 73.065 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019886 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018381 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013686 0.00000