HEADER HYDROLASE 24-JUL-17 5OJU TITLE CRYSTAL STRUCTURE OF MYCOLICIBACTERIUM HASSIACUM GLUCOSYLGLYCERATE TITLE 2 HYDROLASE (MHGGH) E419A VARIANT IN COMPLEX WITH GLUCOSYLGLYCERATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM HASSIACUM (STRAIN DSM 44199 / CIP SOURCE 3 105218 / JCM 12690 / 3849); SOURCE 4 ORGANISM_TAXID: 1122247; SOURCE 5 GENE: C731_0006; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MYCOBACTERIUM, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR T.B.CEREIJA,S.MACEDO-RIBEIRO,P.J.B.PEREIRA REVDAT 5 17-JAN-24 5OJU 1 HETSYN REVDAT 4 29-JUL-20 5OJU 1 COMPND REMARK HETNAM SITE REVDAT 4 2 1 ATOM REVDAT 3 31-JUL-19 5OJU 1 JRNL REVDAT 2 15-MAY-19 5OJU 1 TITLE JRNL REVDAT 1 08-AUG-18 5OJU 0 JRNL AUTH T.B.CEREIJA,S.ALARICO,E.C.LOURENCO,J.A.MANSO,M.R.VENTURA, JRNL AUTH 2 N.EMPADINHAS,S.MACEDO-RIBEIRO,P.J.B.PEREIRA JRNL TITL THE STRUCTURAL CHARACTERIZATION OF A GLUCOSYLGLYCERATE JRNL TITL 2 HYDROLASE PROVIDES INSIGHTS INTO THE MOLECULAR MECHANISM OF JRNL TITL 3 MYCOBACTERIAL RECOVERY FROM NITROGEN STARVATION. JRNL REF IUCRJ V. 6 572 2019 JRNL REFN ESSN 2052-2525 JRNL PMID 31316802 JRNL DOI 10.1107/S2052252519005372 REMARK 2 REMARK 2 RESOLUTION. 2.17 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.17 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.47 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 64760 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 3281 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.4823 - 6.1664 0.99 2880 141 0.1533 0.1490 REMARK 3 2 6.1664 - 4.8963 1.00 2781 124 0.1473 0.1847 REMARK 3 3 4.8963 - 4.2779 1.00 2722 146 0.1144 0.1390 REMARK 3 4 4.2779 - 3.8870 1.00 2721 142 0.1144 0.1626 REMARK 3 5 3.8870 - 3.6085 1.00 2699 141 0.1260 0.1754 REMARK 3 6 3.6085 - 3.3958 1.00 2683 137 0.1391 0.1886 REMARK 3 7 3.3958 - 3.2258 1.00 2673 144 0.1520 0.1783 REMARK 3 8 3.2258 - 3.0854 1.00 2663 136 0.1614 0.1971 REMARK 3 9 3.0854 - 2.9667 1.00 2666 144 0.1620 0.2163 REMARK 3 10 2.9667 - 2.8643 1.00 2667 147 0.1605 0.2054 REMARK 3 11 2.8643 - 2.7748 1.00 2685 128 0.1761 0.2550 REMARK 3 12 2.7748 - 2.6955 1.00 2626 148 0.1764 0.2561 REMARK 3 13 2.6955 - 2.6245 1.00 2677 138 0.1739 0.2323 REMARK 3 14 2.6245 - 2.5605 1.00 2674 137 0.1799 0.2516 REMARK 3 15 2.5605 - 2.5023 1.00 2639 154 0.1843 0.2129 REMARK 3 16 2.5023 - 2.4490 1.00 2629 137 0.1904 0.2498 REMARK 3 17 2.4490 - 2.4001 1.00 2627 162 0.1993 0.2579 REMARK 3 18 2.4001 - 2.3548 0.99 2671 135 0.2059 0.2800 REMARK 3 19 2.3548 - 2.3127 0.99 2599 140 0.2122 0.2664 REMARK 3 20 2.3127 - 2.2735 1.00 2599 163 0.2212 0.2844 REMARK 3 21 2.2735 - 2.2368 1.00 2664 133 0.2318 0.2853 REMARK 3 22 2.2368 - 2.2024 1.00 2633 144 0.2411 0.2983 REMARK 3 23 2.2024 - 2.1700 0.99 2601 160 0.2505 0.2911 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.860 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 7620 REMARK 3 ANGLE : 1.005 10387 REMARK 3 CHIRALITY : 0.055 1072 REMARK 3 PLANARITY : 0.007 1358 REMARK 3 DIHEDRAL : 19.133 4478 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.2168 8.9209 37.7336 REMARK 3 T TENSOR REMARK 3 T11: 0.1691 T22: 0.1617 REMARK 3 T33: 0.2499 T12: 0.0155 REMARK 3 T13: 0.0029 T23: -0.0189 REMARK 3 L TENSOR REMARK 3 L11: 0.5596 L22: 5.1984 REMARK 3 L33: 4.1533 L12: 1.0303 REMARK 3 L13: 0.0926 L23: -2.2373 REMARK 3 S TENSOR REMARK 3 S11: 0.0111 S12: 0.0233 S13: -0.0544 REMARK 3 S21: -0.2460 S22: 0.0882 S23: 0.2541 REMARK 3 S31: 0.0748 S32: -0.2341 S33: -0.0910 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 70 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.0797 21.2827 28.8793 REMARK 3 T TENSOR REMARK 3 T11: 0.3059 T22: 0.1874 REMARK 3 T33: 0.2445 T12: -0.0082 REMARK 3 T13: 0.0540 T23: -0.0406 REMARK 3 L TENSOR REMARK 3 L11: 4.4298 L22: 3.2989 REMARK 3 L33: 5.4702 L12: -1.9366 REMARK 3 L13: 2.7363 L23: -1.9784 REMARK 3 S TENSOR REMARK 3 S11: 0.1683 S12: 0.4259 S13: -0.1490 REMARK 3 S21: -0.5455 S22: -0.1096 S23: -0.0052 REMARK 3 S31: -0.0836 S32: 0.1000 S33: -0.0556 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 135 THROUGH 193 ) REMARK 3 ORIGIN FOR THE GROUP (A): 47.1537 29.3131 35.7195 REMARK 3 T TENSOR REMARK 3 T11: 0.3246 T22: 0.2302 REMARK 3 T33: 0.1594 T12: -0.0193 REMARK 3 T13: 0.0105 T23: 0.0125 REMARK 3 L TENSOR REMARK 3 L11: 6.4411 L22: 5.9690 REMARK 3 L33: 1.0348 L12: -4.2606 REMARK 3 L13: -0.5332 L23: 0.5227 REMARK 3 S TENSOR REMARK 3 S11: 0.0300 S12: 0.1778 S13: 0.2727 REMARK 3 S21: -0.2828 S22: -0.0233 S23: -0.1075 REMARK 3 S31: -0.3180 S32: 0.0892 S33: -0.0095 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 194 THROUGH 249 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.8955 30.4301 25.1624 REMARK 3 T TENSOR REMARK 3 T11: 0.4075 T22: 0.3675 REMARK 3 T33: 0.4438 T12: 0.1095 REMARK 3 T13: -0.1181 T23: 0.0321 REMARK 3 L TENSOR REMARK 3 L11: 1.2464 L22: 5.9863 REMARK 3 L33: 5.0685 L12: 0.1239 REMARK 3 L13: -0.5607 L23: -2.7767 REMARK 3 S TENSOR REMARK 3 S11: 0.1437 S12: 0.3524 S13: 0.1385 REMARK 3 S21: -0.7106 S22: -0.0399 S23: 0.5355 REMARK 3 S31: -0.0205 S32: -0.3686 S33: -0.1026 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 250 THROUGH 320 ) REMARK 3 ORIGIN FOR THE GROUP (A): 47.6535 35.2462 44.6065 REMARK 3 T TENSOR REMARK 3 T11: 0.3241 T22: 0.1646 REMARK 3 T33: 0.2506 T12: -0.0317 REMARK 3 T13: 0.0194 T23: 0.0101 REMARK 3 L TENSOR REMARK 3 L11: 6.6819 L22: 4.2515 REMARK 3 L33: 1.6533 L12: -3.0764 REMARK 3 L13: -0.8581 L23: 0.8311 REMARK 3 S TENSOR REMARK 3 S11: -0.0719 S12: -0.1152 S13: 0.4912 REMARK 3 S21: 0.1694 S22: 0.0603 S23: -0.0011 REMARK 3 S31: -0.3528 S32: 0.0160 S33: 0.0147 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 321 THROUGH 446 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.1986 21.2102 51.4017 REMARK 3 T TENSOR REMARK 3 T11: 0.2153 T22: 0.2109 REMARK 3 T33: 0.3345 T12: 0.0303 REMARK 3 T13: 0.0382 T23: 0.0178 REMARK 3 L TENSOR REMARK 3 L11: 1.8866 L22: 1.8769 REMARK 3 L33: 1.5336 L12: 0.3143 REMARK 3 L13: 0.2837 L23: 0.1256 REMARK 3 S TENSOR REMARK 3 S11: 0.0398 S12: -0.1747 S13: 0.1540 REMARK 3 S21: 0.0394 S22: -0.0485 S23: 0.4093 REMARK 3 S31: -0.1622 S32: -0.2436 S33: 0.0116 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.1642 6.7976 80.9174 REMARK 3 T TENSOR REMARK 3 T11: 0.2735 T22: 0.3191 REMARK 3 T33: 0.2660 T12: -0.0795 REMARK 3 T13: 0.0228 T23: 0.0366 REMARK 3 L TENSOR REMARK 3 L11: 1.3873 L22: 6.9462 REMARK 3 L33: 5.5904 L12: 2.5012 REMARK 3 L13: 2.4574 L23: 2.7103 REMARK 3 S TENSOR REMARK 3 S11: 0.2761 S12: -0.2274 S13: -0.1684 REMARK 3 S21: 0.5861 S22: -0.1011 S23: -0.2657 REMARK 3 S31: 0.3181 S32: 0.1915 S33: -0.1545 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 70 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): 53.2283 18.9751 89.7607 REMARK 3 T TENSOR REMARK 3 T11: 0.4900 T22: 0.4226 REMARK 3 T33: 0.2788 T12: -0.1960 REMARK 3 T13: 0.0232 T23: 0.0340 REMARK 3 L TENSOR REMARK 3 L11: 4.3646 L22: 0.9298 REMARK 3 L33: 6.1113 L12: 0.2121 REMARK 3 L13: 2.9077 L23: 0.2834 REMARK 3 S TENSOR REMARK 3 S11: 0.3721 S12: -0.7640 S13: -0.1930 REMARK 3 S21: 0.4936 S22: -0.2226 S23: 0.0190 REMARK 3 S31: -0.0430 S32: 0.1024 S33: -0.1408 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 135 THROUGH 320 ) REMARK 3 ORIGIN FOR THE GROUP (A): 62.3600 25.2899 82.6595 REMARK 3 T TENSOR REMARK 3 T11: 0.4601 T22: 0.4199 REMARK 3 T33: 0.2987 T12: -0.1604 REMARK 3 T13: -0.0617 T23: -0.0158 REMARK 3 L TENSOR REMARK 3 L11: 2.2704 L22: 1.5072 REMARK 3 L33: 1.7215 L12: 0.7717 REMARK 3 L13: -0.2399 L23: -0.0965 REMARK 3 S TENSOR REMARK 3 S11: 0.2554 S12: -0.5367 S13: 0.0440 REMARK 3 S21: 0.4601 S22: -0.2745 S23: -0.2755 REMARK 3 S31: -0.1789 S32: 0.2955 S33: 0.0443 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 321 THROUGH 446 ) REMARK 3 ORIGIN FOR THE GROUP (A): 62.7628 12.0354 67.2028 REMARK 3 T TENSOR REMARK 3 T11: 0.2166 T22: 0.2587 REMARK 3 T33: 0.2702 T12: -0.0376 REMARK 3 T13: -0.0196 T23: -0.0034 REMARK 3 L TENSOR REMARK 3 L11: 1.8797 L22: 3.2868 REMARK 3 L33: 1.8783 L12: 0.2477 REMARK 3 L13: -0.2494 L23: -1.0548 REMARK 3 S TENSOR REMARK 3 S11: 0.0853 S12: -0.0605 S13: -0.1986 REMARK 3 S21: 0.0066 S22: -0.1527 S23: -0.3156 REMARK 3 S31: 0.0857 S32: 0.2456 S33: 0.0752 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5OJU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1200005879. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96599 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64817 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.170 REMARK 200 RESOLUTION RANGE LOW (A) : 48.741 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.17 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.25 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 0.79000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5OHZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS-BICINE PH 8.5, AMINO ACIDS, PEG REMARK 280 4000, GLYCEROL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 43.04850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 79.53650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.04850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 79.53650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 60060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 86.09700 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 GLY B -1 REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 742 O HOH A 835 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 37 36.56 -90.93 REMARK 500 SER A 55 106.32 -170.34 REMARK 500 THR A 114 -168.53 -112.39 REMARK 500 ASP A 212 107.03 -57.26 REMARK 500 GLU A 319 72.41 -110.68 REMARK 500 PHE A 349 -107.11 -130.73 REMARK 500 TYR A 375 -110.04 68.45 REMARK 500 PRO B 37 37.29 -86.17 REMARK 500 SER B 55 107.39 -167.80 REMARK 500 ASP B 86 -165.01 -105.49 REMARK 500 ARG B 301 -60.73 -90.56 REMARK 500 GLU B 319 68.62 -108.19 REMARK 500 PHE B 349 -112.23 -136.70 REMARK 500 TYR B 375 -105.99 70.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 778 DISTANCE = 5.94 ANGSTROMS DBREF 5OJU A 1 446 UNP K5BDL0 K5BDL0_MYCHD 1 446 DBREF 5OJU B 1 446 UNP K5BDL0 K5BDL0_MYCHD 1 446 SEQADV 5OJU GLY A -1 UNP K5BDL0 EXPRESSION TAG SEQADV 5OJU ALA A 0 UNP K5BDL0 EXPRESSION TAG SEQADV 5OJU ALA A 419 UNP K5BDL0 GLU 419 ENGINEERED MUTATION SEQADV 5OJU GLY B -1 UNP K5BDL0 EXPRESSION TAG SEQADV 5OJU ALA B 0 UNP K5BDL0 EXPRESSION TAG SEQADV 5OJU ALA B 419 UNP K5BDL0 GLU 419 ENGINEERED MUTATION SEQRES 1 A 448 GLY ALA MET PRO HIS ASP PRO SER PHE THR PRO THR GLN SEQRES 2 A 448 LEU ALA ALA ARG ALA ALA TYR LEU LEU ARG GLY ASN ASP SEQRES 3 A 448 LEU GLY THR MET THR THR ALA ALA PRO LEU LEU TYR PRO SEQRES 4 A 448 HIS MET TRP SER TRP ASP ALA ALA PHE VAL ALA ILE GLY SEQRES 5 A 448 LEU ALA PRO LEU SER VAL GLU ARG ALA VAL VAL GLU LEU SEQRES 6 A 448 ASP THR LEU LEU SER ALA GLN TRP ARG ASN GLY MET ILE SEQRES 7 A 448 PRO HIS ILE VAL PHE ALA ASN GLY VAL ASP GLY TYR PHE SEQRES 8 A 448 PRO GLY PRO ALA ARG TRP ALA THR ALA THR LEU ALA ASP SEQRES 9 A 448 ASN ALA PRO ARG ASN ARG LEU THR SER GLY ILE THR GLN SEQRES 10 A 448 PRO PRO VAL HIS ALA ILE ALA VAL GLN ARG ILE LEU GLU SEQRES 11 A 448 HIS ALA ARG THR ARG GLY ARG SER THR ARG ALA VAL ALA SEQRES 12 A 448 GLU ALA PHE LEU ASP ARG ARG TRP GLY ASP LEU MET ARG SEQRES 13 A 448 TRP HIS ARG TRP LEU ALA GLU CYS ARG ASP ARG ASN GLU SEQRES 14 A 448 ARG GLY ARG ILE THR LEU TYR HIS GLY TRP GLU SER GLY SEQRES 15 A 448 MET ASP ASN SER PRO ARG TRP ASP SER ALA TYR ALA ASN SEQRES 16 A 448 VAL VAL PRO GLY LYS LEU PRO GLU TYR GLN ARG ALA ASP SEQRES 17 A 448 ASN VAL ILE ILE THR ASP PRO SER GLN ARG PRO SER ASP SEQRES 18 A 448 GLY GLU TYR ASP ARG TYR LEU TRP LEU LEU GLU GLU MET SEQRES 19 A 448 LYS ALA VAL ARG TYR ASP ASP GLU ARG LEU PRO SER VAL SEQRES 20 A 448 MET SER PHE GLN VAL GLU ASP VAL PHE PHE SER ALA ILE SEQRES 21 A 448 PHE SER VAL ALA CYS GLN VAL LEU ALA GLU ILE GLY GLU SEQRES 22 A 448 ASP TYR LYS ARG PRO HIS ALA ASP VAL LYS ASP LEU TYR SEQRES 23 A 448 LEU TRP ALA GLU ARG PHE ARG ALA GLY VAL VAL GLU THR SEQRES 24 A 448 THR ASP GLN ARG THR GLY ALA ALA ARG ASP PHE ASP VAL SEQRES 25 A 448 LEU ALA GLU LYS TRP LEU VAL THR GLU THR ALA ALA GLN SEQRES 26 A 448 PHE ALA PRO LEU LEU CYS GLY GLY LEU PRO HIS ASP ARG SEQRES 27 A 448 GLU ARG ALA LEU LEU LYS LEU LEU GLU GLY PRO ARG PHE SEQRES 28 A 448 CYS GLY HIS PRO ASP LEU LYS TYR GLY LEU ILE PRO SER SEQRES 29 A 448 THR SER PRO VAL SER ARG ASP PHE ARG PRO ARG GLU TYR SEQRES 30 A 448 TRP ARG GLY PRO VAL TRP PRO VAL LEU THR TRP LEU PHE SEQRES 31 A 448 SER TRP CYS PHE ALA ARG ARG GLY TRP ALA GLU ARG ALA SEQRES 32 A 448 ARG LEU LEU ARG GLN GLU GLY LEU ARG GLN ALA SER ASP SEQRES 33 A 448 GLY SER PHE ALA ALA TYR TYR GLU PRO PHE THR GLY GLU SEQRES 34 A 448 PRO LEU GLY SER MET GLN GLN SER TRP THR ALA ALA ALA SEQRES 35 A 448 VAL LEU ASP TRP LEU GLY SEQRES 1 B 448 GLY ALA MET PRO HIS ASP PRO SER PHE THR PRO THR GLN SEQRES 2 B 448 LEU ALA ALA ARG ALA ALA TYR LEU LEU ARG GLY ASN ASP SEQRES 3 B 448 LEU GLY THR MET THR THR ALA ALA PRO LEU LEU TYR PRO SEQRES 4 B 448 HIS MET TRP SER TRP ASP ALA ALA PHE VAL ALA ILE GLY SEQRES 5 B 448 LEU ALA PRO LEU SER VAL GLU ARG ALA VAL VAL GLU LEU SEQRES 6 B 448 ASP THR LEU LEU SER ALA GLN TRP ARG ASN GLY MET ILE SEQRES 7 B 448 PRO HIS ILE VAL PHE ALA ASN GLY VAL ASP GLY TYR PHE SEQRES 8 B 448 PRO GLY PRO ALA ARG TRP ALA THR ALA THR LEU ALA ASP SEQRES 9 B 448 ASN ALA PRO ARG ASN ARG LEU THR SER GLY ILE THR GLN SEQRES 10 B 448 PRO PRO VAL HIS ALA ILE ALA VAL GLN ARG ILE LEU GLU SEQRES 11 B 448 HIS ALA ARG THR ARG GLY ARG SER THR ARG ALA VAL ALA SEQRES 12 B 448 GLU ALA PHE LEU ASP ARG ARG TRP GLY ASP LEU MET ARG SEQRES 13 B 448 TRP HIS ARG TRP LEU ALA GLU CYS ARG ASP ARG ASN GLU SEQRES 14 B 448 ARG GLY ARG ILE THR LEU TYR HIS GLY TRP GLU SER GLY SEQRES 15 B 448 MET ASP ASN SER PRO ARG TRP ASP SER ALA TYR ALA ASN SEQRES 16 B 448 VAL VAL PRO GLY LYS LEU PRO GLU TYR GLN ARG ALA ASP SEQRES 17 B 448 ASN VAL ILE ILE THR ASP PRO SER GLN ARG PRO SER ASP SEQRES 18 B 448 GLY GLU TYR ASP ARG TYR LEU TRP LEU LEU GLU GLU MET SEQRES 19 B 448 LYS ALA VAL ARG TYR ASP ASP GLU ARG LEU PRO SER VAL SEQRES 20 B 448 MET SER PHE GLN VAL GLU ASP VAL PHE PHE SER ALA ILE SEQRES 21 B 448 PHE SER VAL ALA CYS GLN VAL LEU ALA GLU ILE GLY GLU SEQRES 22 B 448 ASP TYR LYS ARG PRO HIS ALA ASP VAL LYS ASP LEU TYR SEQRES 23 B 448 LEU TRP ALA GLU ARG PHE ARG ALA GLY VAL VAL GLU THR SEQRES 24 B 448 THR ASP GLN ARG THR GLY ALA ALA ARG ASP PHE ASP VAL SEQRES 25 B 448 LEU ALA GLU LYS TRP LEU VAL THR GLU THR ALA ALA GLN SEQRES 26 B 448 PHE ALA PRO LEU LEU CYS GLY GLY LEU PRO HIS ASP ARG SEQRES 27 B 448 GLU ARG ALA LEU LEU LYS LEU LEU GLU GLY PRO ARG PHE SEQRES 28 B 448 CYS GLY HIS PRO ASP LEU LYS TYR GLY LEU ILE PRO SER SEQRES 29 B 448 THR SER PRO VAL SER ARG ASP PHE ARG PRO ARG GLU TYR SEQRES 30 B 448 TRP ARG GLY PRO VAL TRP PRO VAL LEU THR TRP LEU PHE SEQRES 31 B 448 SER TRP CYS PHE ALA ARG ARG GLY TRP ALA GLU ARG ALA SEQRES 32 B 448 ARG LEU LEU ARG GLN GLU GLY LEU ARG GLN ALA SER ASP SEQRES 33 B 448 GLY SER PHE ALA ALA TYR TYR GLU PRO PHE THR GLY GLU SEQRES 34 B 448 PRO LEU GLY SER MET GLN GLN SER TRP THR ALA ALA ALA SEQRES 35 B 448 VAL LEU ASP TRP LEU GLY HET 9WN A 501 18 HET GOL A 502 6 HET GOL A 503 6 HET GOL A 504 6 HET GOL A 505 6 HET GOL A 506 6 HET GOL A 507 6 HET PEG A 508 7 HET 9WN B 501 18 HET GOL B 502 6 HET GOL B 503 6 HET GOL B 504 6 HETNAM 9WN (2R)-2-(ALPHA-D-GLUCOPYRANOSYLOXY)-3-HYDROXYPROPANOIC HETNAM 2 9WN ACID HETNAM GOL GLYCEROL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN 9WN (2~{R})-2-[(2~{R},3~{R},4~{S},5~{S},6~{R})-6- HETSYN 2 9WN (HYDROXYMETHYL)-3,4,5-TRIS(OXIDANYL)OXAN-2-YL]OXY-3- HETSYN 3 9WN OXIDANYL-PROPANOIC ACID; (2R)-2-(ALPHA-D-GLUCOSYLOXY)- HETSYN 4 9WN 3-HYDROXYPROPANOIC ACID; (2R)-2-(D-GLUCOSYLOXY)-3- HETSYN 5 9WN HYDROXYPROPANOIC ACID; (2R)-2-(GLUCOSYLOXY)-3- HETSYN 6 9WN HYDROXYPROPANOIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 9WN 2(C9 H16 O9) FORMUL 4 GOL 9(C3 H8 O3) FORMUL 10 PEG C4 H10 O3 FORMUL 15 HOH *419(H2 O) HELIX 1 AA1 THR A 8 ASN A 23 1 16 HELIX 2 AA2 SER A 41 ALA A 52 1 12 HELIX 3 AA3 SER A 55 ALA A 69 1 15 HELIX 4 AA4 GLY A 91 ALA A 96 1 6 HELIX 5 AA5 ALA A 96 ALA A 101 1 6 HELIX 6 AA6 VAL A 118 GLY A 134 1 17 HELIX 7 AA7 GLY A 134 ARG A 163 1 30 HELIX 8 AA8 HIS A 175 GLY A 180 5 6 HELIX 9 AA9 SER A 184 ARG A 186 5 3 HELIX 10 AB1 TRP A 187 ALA A 192 1 6 HELIX 11 AB2 ALA A 205 ILE A 210 1 6 HELIX 12 AB3 ASP A 212 ARG A 216 5 5 HELIX 13 AB4 SER A 218 VAL A 235 1 18 HELIX 14 AB5 ARG A 241 MET A 246 1 6 HELIX 15 AB6 VAL A 253 TYR A 273 1 21 HELIX 16 AB7 PRO A 276 THR A 297 1 22 HELIX 17 AB8 THR A 320 GLN A 323 5 4 HELIX 18 AB9 PHE A 324 GLY A 330 1 7 HELIX 19 AC1 PRO A 333 GLY A 346 1 14 HELIX 20 AC2 TRP A 381 GLY A 396 1 16 HELIX 21 AC3 TRP A 397 SER A 413 1 17 HELIX 22 AC4 GLN A 434 GLY A 446 1 13 HELIX 23 AC5 THR B 8 ASN B 23 1 16 HELIX 24 AC6 SER B 41 ALA B 52 1 12 HELIX 25 AC7 SER B 55 SER B 68 1 14 HELIX 26 AC8 GLY B 91 ALA B 96 1 6 HELIX 27 AC9 ALA B 96 ALA B 101 1 6 HELIX 28 AD1 VAL B 118 THR B 132 1 15 HELIX 29 AD2 GLY B 134 ARG B 163 1 30 HELIX 30 AD3 HIS B 175 GLY B 180 5 6 HELIX 31 AD4 SER B 184 ARG B 186 5 3 HELIX 32 AD5 TRP B 187 ASN B 193 1 7 HELIX 33 AD6 ALA B 205 ILE B 210 1 6 HELIX 34 AD7 ASP B 212 ARG B 216 5 5 HELIX 35 AD8 SER B 218 VAL B 235 1 18 HELIX 36 AD9 ARG B 241 MET B 246 1 6 HELIX 37 AE1 VAL B 253 TYR B 273 1 21 HELIX 38 AE2 PRO B 276 THR B 297 1 22 HELIX 39 AE3 THR B 320 GLN B 323 5 4 HELIX 40 AE4 PHE B 324 GLY B 330 1 7 HELIX 41 AE5 PRO B 333 GLY B 346 1 14 HELIX 42 AE6 TRP B 381 ARG B 395 1 15 HELIX 43 AE7 TRP B 397 SER B 413 1 17 HELIX 44 AE8 GLN B 434 GLY B 446 1 13 SHEET 1 AA1 3 MET A 39 TRP A 40 0 SHEET 2 AA1 3 ILE A 79 PHE A 81 -1 O VAL A 80 N MET A 39 SHEET 3 AA1 3 LEU A 109 THR A 110 -1 O LEU A 109 N PHE A 81 SHEET 1 AA2 4 ILE A 171 LEU A 173 0 SHEET 2 AA2 4 VAL A 250 ASP A 252 -1 O VAL A 250 N LEU A 173 SHEET 3 AA2 4 ASP A 307 ASP A 309 -1 O PHE A 308 N GLU A 251 SHEET 4 AA2 4 LYS A 314 LEU A 316 -1 O LEU A 316 N ASP A 307 SHEET 1 AA3 2 TYR A 420 TYR A 421 0 SHEET 2 AA3 2 PRO A 428 LEU A 429 -1 O LEU A 429 N TYR A 420 SHEET 1 AA4 3 MET B 39 TRP B 40 0 SHEET 2 AA4 3 ILE B 79 PHE B 81 -1 O VAL B 80 N MET B 39 SHEET 3 AA4 3 LEU B 109 THR B 110 -1 O LEU B 109 N PHE B 81 SHEET 1 AA5 4 ILE B 171 LEU B 173 0 SHEET 2 AA5 4 VAL B 250 ASP B 252 -1 O VAL B 250 N LEU B 173 SHEET 3 AA5 4 ASP B 307 ASP B 309 -1 O PHE B 308 N GLU B 251 SHEET 4 AA5 4 LYS B 314 LEU B 316 -1 O LEU B 316 N ASP B 307 SHEET 1 AA6 2 TYR B 420 TYR B 421 0 SHEET 2 AA6 2 PRO B 428 LEU B 429 -1 O LEU B 429 N TYR B 420 CISPEP 1 PHE A 89 PRO A 90 0 10.47 CISPEP 2 PHE B 89 PRO B 90 0 1.74 CRYST1 86.097 159.073 88.406 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011615 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006286 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011311 0.00000