HEADER PROTEIN BINDING 28-JUL-17 5OMB TITLE CRYSTAL STRUCTURE OF K. LACTIS DDC2 N-TERMINUS IN COMPLEX WITH S. TITLE 2 CEREVISIAE RFA1 N-OB DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: REPLICATION FACTOR A PROTEIN 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 1-132; COMPND 5 SYNONYM: RF-A PROTEIN 1,DNA-BINDING PROTEIN BUF2,REPLICATION PROTEIN COMPND 6 A 69 KDA DNA-BINDING SUBUNIT,SINGLE-STRANDED DNA-BINDING PROTEIN; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA DAMAGE CHECKPOINT PROTEIN LCD1; COMPND 10 CHAIN: C, D; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 STRAIN: ATCC 204508 / S288C; SOURCE 6 GENE: RFA1, BUF2, RPA1, YAR007C, FUN3; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: POPINF; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: KLUYVEROMYCES LACTIS (STRAIN ATCC 8585 / CBS SOURCE 13 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37); SOURCE 14 ORGANISM_COMMON: YEAST; SOURCE 15 ORGANISM_TAXID: 284590; SOURCE 16 STRAIN: ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / SOURCE 17 WM37; SOURCE 18 GENE: LCD1, KLLA0C01892G; SOURCE 19 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 20 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 21 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 22 EXPRESSION_SYSTEM_PLASMID: POPINF KEYWDS OLIGONUCLEOTIDE-BINDING FOLD, COILED-COIL DOMAIN, COMPLEX, NUCLEUS, KEYWDS 2 PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR I.DESHPANDE,A.SEEBER,K.SHIMADA,J.J.KEUSCH,H.GUT,S.M.GASSER REVDAT 3 06-NOV-24 5OMB 1 REMARK REVDAT 2 01-NOV-17 5OMB 1 JRNL REVDAT 1 25-OCT-17 5OMB 0 JRNL AUTH I.DESHPANDE,A.SEEBER,K.SHIMADA,J.J.KEUSCH,H.GUT,S.M.GASSER JRNL TITL STRUCTURAL BASIS OF MEC1-DDC2-RPA ASSEMBLY AND ACTIVATION ON JRNL TITL 2 SINGLE-STRANDED DNA AT SITES OF DAMAGE. JRNL REF MOL. CELL V. 68 431 2017 JRNL REFN ISSN 1097-4164 JRNL PMID 29033322 JRNL DOI 10.1016/J.MOLCEL.2017.09.019 REMARK 2 REMARK 2 RESOLUTION. 1.94 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.5 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.94 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 41015 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 2046 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.94 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.99 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.36 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2545 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2427 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2424 REMARK 3 BIN R VALUE (WORKING SET) : 0.2408 REMARK 3 BIN FREE R VALUE : 0.2808 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.75 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 121 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3655 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 7 REMARK 3 SOLVENT ATOMS : 202 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.95 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -10.23850 REMARK 3 B22 (A**2) : 1.50150 REMARK 3 B33 (A**2) : 8.73700 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.270 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.146 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.134 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.142 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.133 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3765 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5055 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1442 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 125 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 524 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3765 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 480 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : 6 ; 1.000 ; HARMONIC REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4505 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.03 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.80 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 18.56 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -27.0404 25.4087 61.3504 REMARK 3 T TENSOR REMARK 3 T11: 0.0381 T22: -0.1759 REMARK 3 T33: -0.1497 T12: 0.0203 REMARK 3 T13: 0.0227 T23: 0.0305 REMARK 3 L TENSOR REMARK 3 L11: 1.8493 L22: 6.9106 REMARK 3 L33: 2.6961 L12: 2.1150 REMARK 3 L13: -0.6256 L23: -0.0221 REMARK 3 S TENSOR REMARK 3 S11: -0.0359 S12: -0.1092 S13: -0.1623 REMARK 3 S21: 0.6098 S22: 0.0164 S23: 0.0654 REMARK 3 S31: 0.3237 S32: 0.0109 S33: 0.0195 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 29.1973 68.5007 60.7921 REMARK 3 T TENSOR REMARK 3 T11: -0.1328 T22: -0.1472 REMARK 3 T33: -0.0282 T12: 0.0225 REMARK 3 T13: -0.0322 T23: -0.1018 REMARK 3 L TENSOR REMARK 3 L11: 4.2455 L22: 4.9956 REMARK 3 L33: 2.1421 L12: 2.2455 REMARK 3 L13: 0.7010 L23: 0.1834 REMARK 3 S TENSOR REMARK 3 S11: -0.0239 S12: -0.5294 S13: 0.7243 REMARK 3 S21: 0.3215 S22: -0.2019 S23: 0.2671 REMARK 3 S31: -0.1904 S32: -0.0416 S33: 0.2259 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): 1.3651 52.6081 12.9239 REMARK 3 T TENSOR REMARK 3 T11: 0.1376 T22: -0.0332 REMARK 3 T33: -0.0359 T12: -0.0414 REMARK 3 T13: -0.0076 T23: 0.0262 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.0000 REMARK 3 L33: 0.0784 L12: -0.0971 REMARK 3 L13: 0.0639 L23: 0.1749 REMARK 3 S TENSOR REMARK 3 S11: -0.1214 S12: 0.0107 S13: 0.0765 REMARK 3 S21: -0.0216 S22: -0.0483 S23: 0.0382 REMARK 3 S31: -0.1129 S32: -0.0202 S33: 0.1698 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { D|* } REMARK 3 ORIGIN FOR THE GROUP (A): -1.4262 42.2789 12.7490 REMARK 3 T TENSOR REMARK 3 T11: 0.1168 T22: -0.0466 REMARK 3 T33: -0.0679 T12: 0.0140 REMARK 3 T13: 0.0267 T23: -0.0048 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.0000 REMARK 3 L33: 1.3160 L12: 0.0126 REMARK 3 L13: -0.0548 L23: -0.3139 REMARK 3 S TENSOR REMARK 3 S11: -0.0793 S12: 0.0233 S13: 0.0037 REMARK 3 S21: -0.0510 S22: -0.0184 S23: -0.0195 REMARK 3 S31: 0.1712 S32: 0.2048 S33: 0.0978 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5OMB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1200006035. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41015 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.940 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 11.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11000 REMARK 200 FOR THE DATA SET : 12.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.94 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.99 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.3 REMARK 200 DATA REDUNDANCY IN SHELL : 11.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 1.57300 REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM CITRATE TRIBASIC, 20% REMARK 280 PEG 3350, PH 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 17.02500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 85.23500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.47000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 85.23500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 17.02500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.47000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -62.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 PRO A 0 REMARK 465 MSE A 1 REMARK 465 SER A 2 REMARK 465 SER A 3 REMARK 465 SER A 37 REMARK 465 ASP A 38 REMARK 465 GLY A 39 REMARK 465 ALA A 40 REMARK 465 ASN A 41 REMARK 465 GLY B -1 REMARK 465 PRO B 0 REMARK 465 MSE B 1 REMARK 465 SER B 2 REMARK 465 SER B 3 REMARK 465 SER B 37 REMARK 465 GLY C -1 REMARK 465 PRO C 0 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 ASP C 3 REMARK 465 LEU C 4 REMARK 465 TRP C 5 REMARK 465 ASP C 6 REMARK 465 ASP C 7 REMARK 465 ASN C 8 REMARK 465 ASP C 9 REMARK 465 PHE C 108 REMARK 465 THR C 109 REMARK 465 GLY D -1 REMARK 465 PRO D 0 REMARK 465 MET D 1 REMARK 465 ALA D 2 REMARK 465 ASP D 3 REMARK 465 LEU D 4 REMARK 465 TRP D 5 REMARK 465 ASP D 6 REMARK 465 ASP D 7 REMARK 465 ASN D 8 REMARK 465 ASP D 9 REMARK 465 PHE D 108 REMARK 465 THR D 109 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 43 -41.12 -179.26 REMARK 500 ASN A 63 -134.85 51.57 REMARK 500 GLN B 5 74.91 68.53 REMARK 500 ASN B 23 68.98 -152.46 REMARK 500 ALA B 40 -49.73 55.77 REMARK 500 ASN B 63 -137.95 54.13 REMARK 500 GLU B 92 70.25 47.75 REMARK 500 HIS B 127 72.81 -119.90 REMARK 500 GLN C 104 54.90 37.43 REMARK 500 HIS D 106 79.72 56.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 201 DBREF 5OMB A 1 132 UNP P22336 RFA1_YEAST 1 132 DBREF 5OMB B 1 132 UNP P22336 RFA1_YEAST 1 132 DBREF 5OMB C 1 109 UNP Q6CUV9 LCD1_KLULA 1 109 DBREF 5OMB D 1 109 UNP Q6CUV9 LCD1_KLULA 1 109 SEQADV 5OMB GLY A -1 UNP P22336 EXPRESSION TAG SEQADV 5OMB PRO A 0 UNP P22336 EXPRESSION TAG SEQADV 5OMB GLY B -1 UNP P22336 EXPRESSION TAG SEQADV 5OMB PRO B 0 UNP P22336 EXPRESSION TAG SEQADV 5OMB GLY C -1 UNP Q6CUV9 EXPRESSION TAG SEQADV 5OMB PRO C 0 UNP Q6CUV9 EXPRESSION TAG SEQADV 5OMB GLY D -1 UNP Q6CUV9 EXPRESSION TAG SEQADV 5OMB PRO D 0 UNP Q6CUV9 EXPRESSION TAG SEQRES 1 A 134 GLY PRO MSE SER SER VAL GLN LEU SER ARG GLY ASP PHE SEQRES 2 A 134 HIS SER ILE PHE THR ASN LYS GLN ARG TYR ASP ASN PRO SEQRES 3 A 134 THR GLY GLY VAL TYR GLN VAL TYR ASN THR ARG LYS SER SEQRES 4 A 134 ASP GLY ALA ASN SER ASN ARG LYS ASN LEU ILE MSE ILE SEQRES 5 A 134 SER ASP GLY ILE TYR HIS MSE LYS ALA LEU LEU ARG ASN SEQRES 6 A 134 GLN ALA ALA SER LYS PHE GLN SER MSE GLU LEU GLN ARG SEQRES 7 A 134 GLY ASP ILE ILE ARG VAL ILE ILE ALA GLU PRO ALA ILE SEQRES 8 A 134 VAL ARG GLU ARG LYS LYS TYR VAL LEU LEU VAL ASP ASP SEQRES 9 A 134 PHE GLU LEU VAL GLN SER ARG ALA ASP MSE VAL ASN GLN SEQRES 10 A 134 THR SER THR PHE LEU ASP ASN TYR PHE SER GLU HIS PRO SEQRES 11 A 134 ASN GLU THR LEU SEQRES 1 B 134 GLY PRO MSE SER SER VAL GLN LEU SER ARG GLY ASP PHE SEQRES 2 B 134 HIS SER ILE PHE THR ASN LYS GLN ARG TYR ASP ASN PRO SEQRES 3 B 134 THR GLY GLY VAL TYR GLN VAL TYR ASN THR ARG LYS SER SEQRES 4 B 134 ASP GLY ALA ASN SER ASN ARG LYS ASN LEU ILE MSE ILE SEQRES 5 B 134 SER ASP GLY ILE TYR HIS MSE LYS ALA LEU LEU ARG ASN SEQRES 6 B 134 GLN ALA ALA SER LYS PHE GLN SER MSE GLU LEU GLN ARG SEQRES 7 B 134 GLY ASP ILE ILE ARG VAL ILE ILE ALA GLU PRO ALA ILE SEQRES 8 B 134 VAL ARG GLU ARG LYS LYS TYR VAL LEU LEU VAL ASP ASP SEQRES 9 B 134 PHE GLU LEU VAL GLN SER ARG ALA ASP MSE VAL ASN GLN SEQRES 10 B 134 THR SER THR PHE LEU ASP ASN TYR PHE SER GLU HIS PRO SEQRES 11 B 134 ASN GLU THR LEU SEQRES 1 C 111 GLY PRO MET ALA ASP LEU TRP ASP ASP ASN ASP ASP ASP SEQRES 2 C 111 ASP ASP ILE LEU GLU LEU VAL ASN ARG PRO PRO MET SER SEQRES 3 C 111 GLN MET ALA VAL PRO ILE LYS PRO PRO GLU SER GLN ALA SEQRES 4 C 111 GLU GLN LEU MET LYS ALA LYS GLY GLU VAL GLY VAL LEU SEQRES 5 C 111 ARG GLN LYS LEU SER MET LEU GLU LYS THR LEU ARG GLU SEQRES 6 C 111 HIS ASP ASP ASN GLN LYS LYS LEU GLU SER SER LEU LYS SEQRES 7 C 111 SER SER HIS GLU GLU GLU VAL THR LYS LEU LYS ILE GLU SEQRES 8 C 111 LEU GLU ARG LEU GLU ASP GLU ARG LYS PHE MET LEU LEU SEQRES 9 C 111 GLU GLN LYS HIS LEU PHE THR SEQRES 1 D 111 GLY PRO MET ALA ASP LEU TRP ASP ASP ASN ASP ASP ASP SEQRES 2 D 111 ASP ASP ILE LEU GLU LEU VAL ASN ARG PRO PRO MET SER SEQRES 3 D 111 GLN MET ALA VAL PRO ILE LYS PRO PRO GLU SER GLN ALA SEQRES 4 D 111 GLU GLN LEU MET LYS ALA LYS GLY GLU VAL GLY VAL LEU SEQRES 5 D 111 ARG GLN LYS LEU SER MET LEU GLU LYS THR LEU ARG GLU SEQRES 6 D 111 HIS ASP ASP ASN GLN LYS LYS LEU GLU SER SER LEU LYS SEQRES 7 D 111 SER SER HIS GLU GLU GLU VAL THR LYS LEU LYS ILE GLU SEQRES 8 D 111 LEU GLU ARG LEU GLU ASP GLU ARG LYS PHE MET LEU LEU SEQRES 9 D 111 GLU GLN LYS HIS LEU PHE THR MODRES 5OMB MSE A 49 MET MODIFIED RESIDUE MODRES 5OMB MSE A 57 MET MODIFIED RESIDUE MODRES 5OMB MSE A 72 MET MODIFIED RESIDUE MODRES 5OMB MSE A 112 MET MODIFIED RESIDUE MODRES 5OMB MSE B 49 MET MODIFIED RESIDUE MODRES 5OMB MSE B 57 MET MODIFIED RESIDUE MODRES 5OMB MSE B 72 MET MODIFIED RESIDUE MODRES 5OMB MSE B 112 MET MODIFIED RESIDUE HET MSE A 49 8 HET MSE A 57 8 HET MSE A 72 8 HET MSE A 112 8 HET MSE B 49 8 HET MSE B 57 8 HET MSE B 72 8 HET MSE B 112 8 HET CL A 201 1 HET CL B 201 1 HET EDO C 201 4 HET CL D 201 1 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 5 CL 3(CL 1-) FORMUL 7 EDO C2 H6 O2 FORMUL 9 HOH *202(H2 O) HELIX 1 AA1 GLY A 9 ASN A 17 1 9 HELIX 2 AA2 ASN A 17 ASN A 23 1 7 HELIX 3 AA3 ASN A 43 LYS A 45 5 3 HELIX 4 AA4 ARG A 62 MSE A 72 1 11 HELIX 5 AA5 LEU A 120 HIS A 127 1 8 HELIX 6 AA6 PRO A 128 THR A 131 5 4 HELIX 7 AA7 GLY B 9 ASN B 17 1 9 HELIX 8 AA8 ASN B 17 ASP B 22 1 6 HELIX 9 AA9 ASN B 43 LYS B 45 5 3 HELIX 10 AB1 ARG B 62 MSE B 72 1 11 HELIX 11 AB2 LEU B 120 HIS B 127 1 8 HELIX 12 AB3 PRO B 128 THR B 131 5 4 HELIX 13 AB4 ASP C 11 GLU C 16 1 6 HELIX 14 AB5 SER C 35 GLN C 104 1 70 HELIX 15 AB6 ASP D 11 GLU D 16 1 6 HELIX 16 AB7 SER D 35 LYS D 105 1 71 SHEET 1 AA1 7 THR A 118 PHE A 119 0 SHEET 2 AA1 7 TYR A 55 LEU A 61 1 N HIS A 56 O THR A 118 SHEET 3 AA1 7 LYS A 95 GLN A 107 1 O VAL A 100 N LEU A 60 SHEET 4 AA1 7 ILE A 79 VAL A 90 -1 N ILE A 79 O GLN A 107 SHEET 5 AA1 7 VAL A 28 ASN A 33 -1 N TYR A 29 O ILE A 80 SHEET 6 AA1 7 LEU A 47 SER A 51 -1 O MSE A 49 N ASN A 33 SHEET 7 AA1 7 TYR A 55 LEU A 61 -1 O MSE A 57 N ILE A 50 SHEET 1 AA2 7 THR B 118 PHE B 119 0 SHEET 2 AA2 7 TYR B 55 LEU B 61 1 N HIS B 56 O THR B 118 SHEET 3 AA2 7 LYS B 95 GLN B 107 1 O VAL B 100 N LEU B 60 SHEET 4 AA2 7 ILE B 79 VAL B 90 -1 N ILE B 79 O GLN B 107 SHEET 5 AA2 7 VAL B 28 ASN B 33 -1 N TYR B 29 O ILE B 80 SHEET 6 AA2 7 LEU B 47 SER B 51 -1 O MSE B 49 N ASN B 33 SHEET 7 AA2 7 TYR B 55 LEU B 61 -1 O ALA B 59 N ILE B 48 LINK C ILE A 48 N MSE A 49 1555 1555 1.33 LINK C MSE A 49 N ILE A 50 1555 1555 1.33 LINK C HIS A 56 N MSE A 57 1555 1555 1.34 LINK C MSE A 57 N LYS A 58 1555 1555 1.33 LINK C SER A 71 N MSE A 72 1555 1555 1.34 LINK C MSE A 72 N GLU A 73 1555 1555 1.35 LINK C ASP A 111 N MSE A 112 1555 1555 1.35 LINK C MSE A 112 N VAL A 113 1555 1555 1.35 LINK C ILE B 48 N MSE B 49 1555 1555 1.35 LINK C MSE B 49 N ILE B 50 1555 1555 1.33 LINK C HIS B 56 N MSE B 57 1555 1555 1.34 LINK C MSE B 57 N LYS B 58 1555 1555 1.35 LINK C SER B 71 N MSE B 72 1555 1555 1.35 LINK C MSE B 72 N GLU B 73 1555 1555 1.35 LINK C ASP B 111 N MSE B 112 1555 1555 1.35 LINK C MSE B 112 N VAL B 113 1555 1555 1.34 SITE 1 AC1 1 LEU A 47 SITE 1 AC2 8 ARG B 62 ASN B 63 HOH B 302 VAL C 18 SITE 2 AC2 8 ASN C 19 PRO C 29 ILE C 30 HOH C 337 CRYST1 34.050 94.940 170.470 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.029369 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010533 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005866 0.00000