HEADER VIRAL PROTEIN 31-JUL-17 5OMI TITLE CRYSTAL STRUCTURE OF GP2 FROM LASSA VIRUS IN A POST FUSION TITLE 2 CONFORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PRE-GLYCOPROTEIN POLYPROTEIN GP COMPLEX; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LASSA MAMMARENAVIRUS; SOURCE 3 ORGANISM_TAXID: 11620; SOURCE 4 GENE: GPC; SOURCE 5 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 6 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111 KEYWDS VIRAL GLYCOPROTEIN, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.SHULMAN,R.DISKIN REVDAT 5 17-JAN-24 5OMI 1 HETSYN REVDAT 4 29-JUL-20 5OMI 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE REVDAT 3 05-JUN-19 5OMI 1 JRNL REVDAT 2 08-MAY-19 5OMI 1 JRNL REVDAT 1 29-AUG-18 5OMI 0 JRNL AUTH A.SHULMAN,M.KATZ,H.COHEN-DVASHI,H.M.GREENBLATT,Y.LEVY, JRNL AUTH 2 R.DISKIN JRNL TITL VARIATIONS IN CORE PACKING OF GP2 FROM OLD WORLD JRNL TITL 2 MAMMARENAVIRUSES IN THEIR POST-FUSION CONFORMATIONS AFFECT JRNL TITL 3 MEMBRANE-FUSION EFFICIENCIES. JRNL REF J.MOL.BIOL. V. 431 2095 2019 JRNL REFN ESSN 1089-8638 JRNL PMID 31004664 JRNL DOI 10.1016/J.JMB.2019.04.012 REMARK 2 REMARK 2 RESOLUTION. 2.56 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.56 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.52 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 17098 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.237 REMARK 3 R VALUE (WORKING SET) : 0.231 REMARK 3 FREE R VALUE : 0.287 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1713 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.5247 - 5.8583 0.99 1363 155 0.2259 0.2746 REMARK 3 2 5.8583 - 4.6510 1.00 1311 145 0.2146 0.2607 REMARK 3 3 4.6510 - 4.0634 1.00 1297 143 0.1775 0.2085 REMARK 3 4 4.0634 - 3.6920 1.00 1279 139 0.1973 0.2739 REMARK 3 5 3.6920 - 3.4275 1.00 1291 141 0.2403 0.3120 REMARK 3 6 3.4275 - 3.2254 1.00 1270 145 0.2716 0.3545 REMARK 3 7 3.2254 - 3.0639 1.00 1264 144 0.2971 0.3461 REMARK 3 8 3.0639 - 2.9306 1.00 1258 140 0.3083 0.3517 REMARK 3 9 2.9306 - 2.8177 0.99 1280 130 0.3139 0.4530 REMARK 3 10 2.8177 - 2.7205 1.00 1254 145 0.3151 0.3759 REMARK 3 11 2.7205 - 2.6355 1.00 1262 139 0.3344 0.4270 REMARK 3 12 2.6355 - 2.5601 1.00 1256 147 0.3541 0.3765 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.460 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.210 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2760 REMARK 3 ANGLE : 0.935 3720 REMARK 3 CHIRALITY : 0.055 407 REMARK 3 PLANARITY : 0.007 476 REMARK 3 DIHEDRAL : 12.260 1660 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 304 THROUGH 354 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.8444 18.5373 -1.8675 REMARK 3 T TENSOR REMARK 3 T11: 0.6898 T22: 0.8865 REMARK 3 T33: 0.5992 T12: -0.0582 REMARK 3 T13: 0.0383 T23: -0.0549 REMARK 3 L TENSOR REMARK 3 L11: 0.1898 L22: 0.7371 REMARK 3 L33: 3.5832 L12: -0.2369 REMARK 3 L13: -0.0806 L23: -0.5671 REMARK 3 S TENSOR REMARK 3 S11: -0.3491 S12: -0.2707 S13: 0.1377 REMARK 3 S21: 0.0677 S22: -0.4120 S23: 0.1982 REMARK 3 S31: -0.4682 S32: -1.5589 S33: 0.7424 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 355 THROUGH 372 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.0427 2.4835 -30.4016 REMARK 3 T TENSOR REMARK 3 T11: 1.2053 T22: 0.7628 REMARK 3 T33: 0.9638 T12: 0.1204 REMARK 3 T13: -0.1181 T23: -0.0226 REMARK 3 L TENSOR REMARK 3 L11: 7.0950 L22: 4.3206 REMARK 3 L33: 2.0230 L12: 0.6385 REMARK 3 L13: -2.5211 L23: 0.7645 REMARK 3 S TENSOR REMARK 3 S11: 1.4812 S12: 0.3752 S13: -0.6821 REMARK 3 S21: -0.6715 S22: -0.4413 S23: 0.5307 REMARK 3 S31: 2.0518 S32: 0.0797 S33: 0.0883 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 373 THROUGH 401 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.6966 7.6762 -18.4735 REMARK 3 T TENSOR REMARK 3 T11: 1.0000 T22: 0.6317 REMARK 3 T33: 0.7011 T12: -0.1666 REMARK 3 T13: -0.0439 T23: 0.0369 REMARK 3 L TENSOR REMARK 3 L11: 1.8759 L22: 3.9425 REMARK 3 L33: 9.8542 L12: -0.7906 REMARK 3 L13: -2.3807 L23: 0.6300 REMARK 3 S TENSOR REMARK 3 S11: 0.3212 S12: -0.8682 S13: -0.4043 REMARK 3 S21: -0.0467 S22: -0.0545 S23: 0.7398 REMARK 3 S31: -0.3957 S32: 0.2314 S33: 0.0119 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 402 THROUGH 418 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.7153 10.1342 19.0890 REMARK 3 T TENSOR REMARK 3 T11: 1.5447 T22: 1.9045 REMARK 3 T33: 1.0899 T12: -0.1487 REMARK 3 T13: -0.2195 T23: -0.1015 REMARK 3 L TENSOR REMARK 3 L11: 5.3250 L22: 7.5691 REMARK 3 L33: 2.3059 L12: -2.0822 REMARK 3 L13: 1.2214 L23: -2.0839 REMARK 3 S TENSOR REMARK 3 S11: -1.1282 S12: -0.3197 S13: -0.8531 REMARK 3 S21: 0.5795 S22: -0.4110 S23: 0.7774 REMARK 3 S31: -0.2264 S32: -3.4938 S33: 0.8337 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 304 THROUGH 354 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.3894 11.3136 -1.8846 REMARK 3 T TENSOR REMARK 3 T11: 0.9657 T22: 0.6428 REMARK 3 T33: 0.6876 T12: 0.1016 REMARK 3 T13: 0.0541 T23: 0.0912 REMARK 3 L TENSOR REMARK 3 L11: 1.8139 L22: 0.7255 REMARK 3 L33: 3.8945 L12: 0.1855 REMARK 3 L13: 1.9335 L23: 0.5999 REMARK 3 S TENSOR REMARK 3 S11: -0.3709 S12: -0.2950 S13: -0.2212 REMARK 3 S21: 0.2120 S22: -0.2346 S23: 0.0350 REMARK 3 S31: 2.1423 S32: 0.5965 S33: 0.2472 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 355 THROUGH 365 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.2643 21.3916 -37.2136 REMARK 3 T TENSOR REMARK 3 T11: 0.8898 T22: 1.3739 REMARK 3 T33: 0.8180 T12: 0.0710 REMARK 3 T13: -0.0083 T23: 0.0844 REMARK 3 L TENSOR REMARK 3 L11: 3.8405 L22: 4.2036 REMARK 3 L33: 4.2071 L12: 1.3520 REMARK 3 L13: 3.8424 L23: 1.6592 REMARK 3 S TENSOR REMARK 3 S11: 0.3178 S12: -0.0703 S13: -1.2358 REMARK 3 S21: -0.3601 S22: 0.4966 S23: -0.7638 REMARK 3 S31: -0.1028 S32: 3.0237 S33: 0.0424 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 366 THROUGH 376 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.3787 31.4616 -21.0501 REMARK 3 T TENSOR REMARK 3 T11: 0.8605 T22: 1.9622 REMARK 3 T33: 2.2115 T12: 0.1165 REMARK 3 T13: 0.1980 T23: -0.2932 REMARK 3 L TENSOR REMARK 3 L11: 4.6792 L22: 5.2314 REMARK 3 L33: 8.5329 L12: -3.8943 REMARK 3 L13: 0.8866 L23: -1.3460 REMARK 3 S TENSOR REMARK 3 S11: 1.1532 S12: -0.8855 S13: -0.0489 REMARK 3 S21: 0.8060 S22: 0.1285 S23: 0.4370 REMARK 3 S31: -1.3028 S32: -1.3589 S33: 0.1551 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 377 THROUGH 401 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.2943 17.1406 -17.5782 REMARK 3 T TENSOR REMARK 3 T11: 0.6837 T22: 1.1335 REMARK 3 T33: 0.9215 T12: 0.0663 REMARK 3 T13: -0.0591 T23: 0.1532 REMARK 3 L TENSOR REMARK 3 L11: 0.9273 L22: 3.0681 REMARK 3 L33: 4.2318 L12: 1.3226 REMARK 3 L13: -1.9837 L23: -1.9029 REMARK 3 S TENSOR REMARK 3 S11: -0.2578 S12: -0.1580 S13: -0.1168 REMARK 3 S21: 0.1336 S22: 0.0618 S23: -0.6121 REMARK 3 S31: 0.1536 S32: 1.3612 S33: -0.0713 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 402 THROUGH 417 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.3829 10.2326 17.8938 REMARK 3 T TENSOR REMARK 3 T11: 1.3672 T22: 1.6942 REMARK 3 T33: 1.2257 T12: 0.1402 REMARK 3 T13: 0.1249 T23: -0.2086 REMARK 3 L TENSOR REMARK 3 L11: 5.7975 L22: 2.5066 REMARK 3 L33: 5.9070 L12: -0.5797 REMARK 3 L13: -5.6626 L23: 1.1228 REMARK 3 S TENSOR REMARK 3 S11: 0.5988 S12: -0.8449 S13: 0.1454 REMARK 3 S21: -0.4872 S22: 0.8254 S23: -1.8838 REMARK 3 S31: 0.0192 S32: 2.4603 S33: -0.8994 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 303 THROUGH 354 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.8834 21.4722 -1.5824 REMARK 3 T TENSOR REMARK 3 T11: 0.6767 T22: 0.7897 REMARK 3 T33: 0.6332 T12: -0.1165 REMARK 3 T13: -0.0716 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 0.8459 L22: 0.6307 REMARK 3 L33: 4.4475 L12: 0.1695 REMARK 3 L13: 0.3084 L23: 0.9766 REMARK 3 S TENSOR REMARK 3 S11: -0.2628 S12: 0.0103 S13: 0.1878 REMARK 3 S21: 0.2628 S22: -0.3886 S23: -0.1427 REMARK 3 S31: -0.8762 S32: 1.1770 S33: 0.4639 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 355 THROUGH 375 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.9844 22.0204 -29.2307 REMARK 3 T TENSOR REMARK 3 T11: 0.9904 T22: 1.1911 REMARK 3 T33: 1.0474 T12: 0.1779 REMARK 3 T13: 0.0917 T23: 0.2920 REMARK 3 L TENSOR REMARK 3 L11: 4.2921 L22: 7.8008 REMARK 3 L33: 3.7993 L12: -5.2367 REMARK 3 L13: -1.5222 L23: 4.0978 REMARK 3 S TENSOR REMARK 3 S11: -1.1441 S12: -0.6008 S13: -1.0054 REMARK 3 S21: 1.4387 S22: 0.7922 S23: 1.3743 REMARK 3 S31: 0.8805 S32: -0.0086 S33: 0.8613 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 376 THROUGH 389 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.2292 18.7070 -27.3360 REMARK 3 T TENSOR REMARK 3 T11: 1.0383 T22: 1.0712 REMARK 3 T33: 0.9122 T12: -0.1834 REMARK 3 T13: -0.1743 T23: 0.1975 REMARK 3 L TENSOR REMARK 3 L11: 3.5078 L22: 0.4469 REMARK 3 L33: 3.0518 L12: -1.1321 REMARK 3 L13: 3.0800 L23: -0.8068 REMARK 3 S TENSOR REMARK 3 S11: 1.8456 S12: 0.8244 S13: -1.7088 REMARK 3 S21: 1.5241 S22: 0.2431 S23: -0.0131 REMARK 3 S31: 2.3036 S32: -1.6209 S33: -0.4280 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 390 THROUGH 401 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.6767 28.0251 -11.7317 REMARK 3 T TENSOR REMARK 3 T11: 1.0396 T22: 0.8986 REMARK 3 T33: 0.8569 T12: -0.0487 REMARK 3 T13: 0.0447 T23: -0.1364 REMARK 3 L TENSOR REMARK 3 L11: 7.5920 L22: 5.4383 REMARK 3 L33: 3.9219 L12: 0.3376 REMARK 3 L13: 5.1548 L23: 1.8780 REMARK 3 S TENSOR REMARK 3 S11: 0.4573 S12: 0.2990 S13: 0.4120 REMARK 3 S21: 1.2386 S22: 0.1387 S23: 0.6282 REMARK 3 S31: -0.7806 S32: 2.3916 S33: -0.2517 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 402 THROUGH 416 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.4810 31.3161 17.2429 REMARK 3 T TENSOR REMARK 3 T11: 1.8768 T22: 1.5176 REMARK 3 T33: 1.4142 T12: 0.1471 REMARK 3 T13: 0.0991 T23: 0.2881 REMARK 3 L TENSOR REMARK 3 L11: 3.7639 L22: 8.4695 REMARK 3 L33: 1.7438 L12: -0.3083 REMARK 3 L13: 1.9891 L23: 2.2956 REMARK 3 S TENSOR REMARK 3 S11: -0.1213 S12: 2.4590 S13: 2.0046 REMARK 3 S21: -2.2027 S22: -1.5019 S23: 2.6279 REMARK 3 S31: 0.6301 S32: 2.8058 S33: 0.1509 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5OMI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 31-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1200006050. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUL-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97626 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17135 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.560 REMARK 200 RESOLUTION RANGE LOW (A) : 49.520 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3MKO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM BIS-TRS PH-6.5, 500 MM SODIUM REMARK 280 POTASSIUM TARTRATE TETRAHYDRATE, 6.0% PEG10000, 15 MM HCL AND 3% REMARK 280 DIAMINO-PENTANE-DIHYDROCHLORIDE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 85.77550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 85.77550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 29.15900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 51.71650 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 29.15900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 51.71650 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 85.77550 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 29.15900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 51.71650 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 85.77550 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 29.15900 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 51.71650 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -128.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 302 REMARK 465 GLY A 303 REMARK 465 THR A 375 REMARK 465 THR A 376 REMARK 465 THR A 377 REMARK 465 GLY A 378 REMARK 465 ARG A 379 REMARK 465 THR A 380 REMARK 465 SER A 381 REMARK 465 LEU A 382 REMARK 465 TYR A 419 REMARK 465 GLY B 302 REMARK 465 GLY B 303 REMARK 465 GLY B 378 REMARK 465 ARG B 379 REMARK 465 THR B 380 REMARK 465 SER B 381 REMARK 465 LEU B 382 REMARK 465 PRO B 383 REMARK 465 GLU B 418 REMARK 465 TYR B 419 REMARK 465 GLY C 302 REMARK 465 ARG C 379 REMARK 465 THR C 380 REMARK 465 SER C 381 REMARK 465 LEU C 382 REMARK 465 LYS C 417 REMARK 465 GLU C 418 REMARK 465 TYR C 419 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 ND2 ASN A 365 OD2 ASP B 306 4555 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 373 0.38 -68.60 REMARK 500 REMARK 500 REMARK: NULL DBREF1 5OMI A 306 419 UNP A0A097F3Y1_9VIRU DBREF2 5OMI A A0A097F3Y1 306 419 DBREF1 5OMI B 306 419 UNP A0A097F3Y1_9VIRU DBREF2 5OMI B A0A097F3Y1 306 419 DBREF1 5OMI C 306 419 UNP A0A097F3Y1_9VIRU DBREF2 5OMI C A0A097F3Y1 306 419 SEQADV 5OMI GLY A 302 UNP A0A097F3Y EXPRESSION TAG SEQADV 5OMI GLY A 303 UNP A0A097F3Y EXPRESSION TAG SEQADV 5OMI SER A 304 UNP A0A097F3Y EXPRESSION TAG SEQADV 5OMI GLY A 305 UNP A0A097F3Y EXPRESSION TAG SEQADV 5OMI SER A 310 UNP A0A097F3Y CYS 310 ENGINEERED MUTATION SEQADV 5OMI GLY B 302 UNP A0A097F3Y EXPRESSION TAG SEQADV 5OMI GLY B 303 UNP A0A097F3Y EXPRESSION TAG SEQADV 5OMI SER B 304 UNP A0A097F3Y EXPRESSION TAG SEQADV 5OMI GLY B 305 UNP A0A097F3Y EXPRESSION TAG SEQADV 5OMI SER B 310 UNP A0A097F3Y CYS 310 ENGINEERED MUTATION SEQADV 5OMI GLY C 302 UNP A0A097F3Y EXPRESSION TAG SEQADV 5OMI GLY C 303 UNP A0A097F3Y EXPRESSION TAG SEQADV 5OMI SER C 304 UNP A0A097F3Y EXPRESSION TAG SEQADV 5OMI GLY C 305 UNP A0A097F3Y EXPRESSION TAG SEQADV 5OMI SER C 310 UNP A0A097F3Y CYS 310 ENGINEERED MUTATION SEQRES 1 A 118 GLY GLY SER GLY ASP GLU GLU PHE SER ASP MET LEU ARG SEQRES 2 A 118 LEU PHE ASP PHE ASN LYS GLN ALA ILE GLN ARG LEU LYS SEQRES 3 A 118 ALA GLU ALA GLN MET SER ILE GLN LEU ILE ASN LYS ALA SEQRES 4 A 118 VAL ASN ALA LEU ILE ASN ASP GLN LEU ILE MET LYS ASN SEQRES 5 A 118 HIS LEU ARG ASP ILE MET GLY ILE PRO TYR CYS ASN TYR SEQRES 6 A 118 SER LYS TYR TRP TYR LEU ASN HIS THR THR THR GLY ARG SEQRES 7 A 118 THR SER LEU PRO LYS CYS TRP LEU VAL SER ASN GLY SER SEQRES 8 A 118 TYR LEU ASN GLU THR HIS PHE SER ASP ASP ILE GLU GLN SEQRES 9 A 118 GLN ALA ASP ASN MET ILE THR GLU MET LEU GLN LYS GLU SEQRES 10 A 118 TYR SEQRES 1 B 118 GLY GLY SER GLY ASP GLU GLU PHE SER ASP MET LEU ARG SEQRES 2 B 118 LEU PHE ASP PHE ASN LYS GLN ALA ILE GLN ARG LEU LYS SEQRES 3 B 118 ALA GLU ALA GLN MET SER ILE GLN LEU ILE ASN LYS ALA SEQRES 4 B 118 VAL ASN ALA LEU ILE ASN ASP GLN LEU ILE MET LYS ASN SEQRES 5 B 118 HIS LEU ARG ASP ILE MET GLY ILE PRO TYR CYS ASN TYR SEQRES 6 B 118 SER LYS TYR TRP TYR LEU ASN HIS THR THR THR GLY ARG SEQRES 7 B 118 THR SER LEU PRO LYS CYS TRP LEU VAL SER ASN GLY SER SEQRES 8 B 118 TYR LEU ASN GLU THR HIS PHE SER ASP ASP ILE GLU GLN SEQRES 9 B 118 GLN ALA ASP ASN MET ILE THR GLU MET LEU GLN LYS GLU SEQRES 10 B 118 TYR SEQRES 1 C 118 GLY GLY SER GLY ASP GLU GLU PHE SER ASP MET LEU ARG SEQRES 2 C 118 LEU PHE ASP PHE ASN LYS GLN ALA ILE GLN ARG LEU LYS SEQRES 3 C 118 ALA GLU ALA GLN MET SER ILE GLN LEU ILE ASN LYS ALA SEQRES 4 C 118 VAL ASN ALA LEU ILE ASN ASP GLN LEU ILE MET LYS ASN SEQRES 5 C 118 HIS LEU ARG ASP ILE MET GLY ILE PRO TYR CYS ASN TYR SEQRES 6 C 118 SER LYS TYR TRP TYR LEU ASN HIS THR THR THR GLY ARG SEQRES 7 C 118 THR SER LEU PRO LYS CYS TRP LEU VAL SER ASN GLY SER SEQRES 8 C 118 TYR LEU ASN GLU THR HIS PHE SER ASP ASP ILE GLU GLN SEQRES 9 C 118 GLN ALA ASP ASN MET ILE THR GLU MET LEU GLN LYS GLU SEQRES 10 C 118 TYR HET CL A 501 1 HET CL A 502 1 HET NAG A 503 14 HET NAG B 501 14 HET NA C 501 1 HET NAG C 502 14 HETNAM CL CHLORIDE ION HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM NA SODIUM ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 4 CL 2(CL 1-) FORMUL 6 NAG 3(C8 H15 N O6) FORMUL 8 NA NA 1+ FORMUL 10 HOH *4(H2 O) HELIX 1 AA1 GLY A 305 LEU A 355 1 51 HELIX 2 AA2 ARG A 356 MET A 359 5 4 HELIX 3 AA3 SER A 367 HIS A 374 1 8 HELIX 4 AA4 SER A 389 TYR A 393 5 5 HELIX 5 AA5 ASP A 401 GLU A 418 1 18 HELIX 6 AA6 GLY B 305 LEU B 355 1 51 HELIX 7 AA7 ARG B 356 MET B 359 5 4 HELIX 8 AA8 SER B 367 THR B 377 1 11 HELIX 9 AA9 SER B 389 TYR B 393 5 5 HELIX 10 AB1 ASP B 401 LYS B 417 1 17 HELIX 11 AB2 GLY C 305 LEU C 355 1 51 HELIX 12 AB3 SER C 367 GLY C 378 1 12 HELIX 13 AB4 SER C 389 TYR C 393 5 5 HELIX 14 AB5 ASP C 401 GLN C 416 1 16 SSBOND 1 CYS A 364 CYS A 385 1555 1555 2.04 SSBOND 2 CYS B 364 CYS B 385 1555 1555 2.04 SSBOND 3 CYS C 364 CYS C 385 1555 1555 2.05 LINK ND2 ASN A 395 C1 NAG A 503 1555 1555 1.44 LINK ND2 ASN B 395 C1 NAG B 501 1555 1555 1.44 LINK ND2 ASN C 395 C1 NAG C 502 1555 1555 1.44 CRYST1 58.318 103.433 171.551 90.00 90.00 90.00 C 2 2 21 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017147 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009668 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005829 0.00000