HEADER TRANSFERASE 17-AUG-17 5OSE TITLE CRYSTAL STRUCTURE OF AURORA-A KINASE IN COMPLEX WITH AN ALLOSTERICALLY TITLE 2 BINDING FRAGMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: AURORA KINASE A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AURORA 2,AURORA/IPL1-RELATED KINASE 1,HARK1,BREAST TUMOR- COMPND 5 AMPLIFIED KINASE,SERINE/THREONINE-PROTEIN KINASE 15,SERINE/THREONINE- COMPND 6 PROTEIN KINASE 6,SERINE/THREONINE-PROTEIN KINASE AURORA-A; COMPND 7 EC: 2.7.11.1; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AURKA, AIK, AIRK1, ARK1, AURA, AYK1, BTAK, IAK1, STK15, STK6; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KINASE, ALLOSTERIC INHIBITOR, FRAGMENT, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR P.J.MCINTYRE,P.M.COLLINS,F.VON DELFT,R.BAYLISS REVDAT 2 29-NOV-17 5OSE 1 JRNL REVDAT 1 01-NOV-17 5OSE 0 JRNL AUTH P.J.MCINTYRE,P.M.COLLINS,L.VRZAL,K.BIRCHALL,L.H.ARNOLD, JRNL AUTH 2 C.MPAMHANGA,P.J.COOMBS,S.G.BURGESS,M.W.RICHARDS,A.WINTER, JRNL AUTH 3 V.VEVERKA,F.V.DELFT,A.MERRITT,R.BAYLISS JRNL TITL CHARACTERIZATION OF THREE DRUGGABLE HOT-SPOTS IN THE JRNL TITL 2 AURORA-A/TPX2 INTERACTION USING BIOCHEMICAL, BIOPHYSICAL, JRNL TITL 3 AND FRAGMENT-BASED APPROACHES. JRNL REF ACS CHEM. BIOL. V. 12 2906 2017 JRNL REFN ESSN 1554-8937 JRNL PMID 29045126 JRNL DOI 10.1021/ACSCHEMBIO.7B00537 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 70.99 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 28275 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1420 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.360 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 53.45 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 127 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.6917 22.2450 -12.0392 REMARK 3 T TENSOR REMARK 3 T11: 0.4298 T22: 0.3786 REMARK 3 T33: 0.4630 T12: -0.0233 REMARK 3 T13: 0.0326 T23: -0.1428 REMARK 3 L TENSOR REMARK 3 L11: 2.6709 L22: 1.7844 REMARK 3 L33: 0.6370 L12: 1.1846 REMARK 3 L13: 0.4194 L23: 0.0381 REMARK 3 S TENSOR REMARK 3 S11: -0.0052 S12: -0.0791 S13: -0.2900 REMARK 3 S21: -0.1792 S22: 0.1198 S23: -0.3256 REMARK 3 S31: 0.2168 S32: 0.1211 S33: -0.1024 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 173 THROUGH 187 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.6307 20.4014 -16.8795 REMARK 3 T TENSOR REMARK 3 T11: 0.6699 T22: 0.5864 REMARK 3 T33: 0.4903 T12: -0.0612 REMARK 3 T13: -0.0503 T23: -0.1753 REMARK 3 L TENSOR REMARK 3 L11: 4.7381 L22: 8.4816 REMARK 3 L33: 6.7805 L12: 2.1604 REMARK 3 L13: -1.8725 L23: -4.1937 REMARK 3 S TENSOR REMARK 3 S11: -0.0890 S12: 0.8510 S13: -0.7375 REMARK 3 S21: -1.0274 S22: 0.1116 S23: 0.2929 REMARK 3 S31: 0.3071 S32: -1.1994 S33: 0.1817 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 188 THROUGH 287 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.8812 33.0966 -10.9612 REMARK 3 T TENSOR REMARK 3 T11: 0.3641 T22: 0.3967 REMARK 3 T33: 0.2864 T12: -0.0349 REMARK 3 T13: -0.0400 T23: -0.0279 REMARK 3 L TENSOR REMARK 3 L11: 3.6256 L22: 3.1059 REMARK 3 L33: 0.6650 L12: -0.9591 REMARK 3 L13: -0.4283 L23: 0.4418 REMARK 3 S TENSOR REMARK 3 S11: -0.0386 S12: 0.2807 S13: -0.0668 REMARK 3 S21: -0.2213 S22: 0.1446 S23: -0.0092 REMARK 3 S31: 0.0320 S32: -0.0578 S33: -0.0929 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 289 THROUGH 324 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.1349 32.1531 -3.6551 REMARK 3 T TENSOR REMARK 3 T11: 0.3535 T22: 0.4263 REMARK 3 T33: 0.4159 T12: -0.0034 REMARK 3 T13: -0.0385 T23: -0.0575 REMARK 3 L TENSOR REMARK 3 L11: 2.4217 L22: 2.9348 REMARK 3 L33: 3.1978 L12: 0.9393 REMARK 3 L13: 0.1301 L23: 0.6125 REMARK 3 S TENSOR REMARK 3 S11: 0.0240 S12: 0.4146 S13: -0.2160 REMARK 3 S21: 0.1231 S22: 0.0840 S23: 0.0526 REMARK 3 S31: 0.3494 S32: -0.3391 S33: 0.0255 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 325 THROUGH 342 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.6930 30.2366 7.8396 REMARK 3 T TENSOR REMARK 3 T11: 0.4549 T22: 0.4233 REMARK 3 T33: 0.4177 T12: 0.0013 REMARK 3 T13: 0.0999 T23: -0.0750 REMARK 3 L TENSOR REMARK 3 L11: 2.9530 L22: 3.5066 REMARK 3 L33: 3.3617 L12: -0.6094 REMARK 3 L13: 1.5664 L23: -1.7350 REMARK 3 S TENSOR REMARK 3 S11: -0.1053 S12: -0.5810 S13: -0.0783 REMARK 3 S21: 0.4986 S22: -0.1112 S23: 0.2588 REMARK 3 S31: 0.0392 S32: -0.1451 S33: 0.2325 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 343 THROUGH 391 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.2025 45.3799 -4.2345 REMARK 3 T TENSOR REMARK 3 T11: 0.3833 T22: 0.4021 REMARK 3 T33: 0.5416 T12: 0.0520 REMARK 3 T13: -0.0747 T23: -0.0246 REMARK 3 L TENSOR REMARK 3 L11: 2.0734 L22: 3.3253 REMARK 3 L33: 2.3999 L12: -0.4747 REMARK 3 L13: -0.4902 L23: -0.2085 REMARK 3 S TENSOR REMARK 3 S11: 0.0345 S12: 0.2195 S13: 0.4834 REMARK 3 S21: -0.1659 S22: -0.0309 S23: 0.4796 REMARK 3 S31: -0.3747 S32: -0.3169 S33: 0.0036 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5OSE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1200006277. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9282 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52003 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 70.988 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 10.28 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.7600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 10.65 REMARK 200 R MERGE FOR SHELL (I) : 2.36000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.020 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS, PH 8.5: 0.5 M NACL: 0.2 M REMARK 280 MGCL2: 32.5 % V/V PEG 3350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.42000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 116.84000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 87.63000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 146.05000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 29.21000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 58.42000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 116.84000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 146.05000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 87.63000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 29.21000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 141 CG CD CE NZ REMARK 470 LYS A 143 CG CD CE NZ REMARK 470 LYS A 171 CG CD CE NZ REMARK 470 ARG A 220 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 339 CG CD CE NZ REMARK 470 ARG A 375 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN A 185 O HOH A 501 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 202 21.75 -142.87 REMARK 500 ALA A 203 -15.45 88.45 REMARK 500 SER A 226 -58.95 74.62 REMARK 500 ASP A 256 39.83 -140.19 REMARK 500 ASP A 274 78.15 59.39 REMARK 500 ALA A 290 -72.54 -81.25 REMARK 500 ASP A 307 -158.20 -144.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 261 OD1 REMARK 620 2 ASP A 274 OD2 89.7 REMARK 620 3 ADP A 401 O3B 179.1 89.5 REMARK 620 4 ADP A 401 O2A 93.6 93.0 86.0 REMARK 620 5 HOH A 563 O 84.8 174.4 96.0 86.4 REMARK 620 6 HOH A 565 O 90.6 95.5 89.9 170.6 85.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 274 OD1 REMARK 620 2 ADP A 401 O1B 86.8 REMARK 620 3 HOH A 502 O 88.6 97.5 REMARK 620 4 HOH A 557 O 91.2 88.6 173.8 REMARK 620 5 HOH A 579 O 178.5 94.7 90.8 89.3 REMARK 620 6 HOH A 593 O 87.1 169.0 91.5 82.4 91.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue A98 A 404 DBREF 5OSE A 127 391 UNP O14965 AURKA_HUMAN 127 391 SEQADV 5OSE ALA A 290 UNP O14965 CYS 290 CONFLICT SEQRES 1 A 265 GLN TRP ALA LEU GLU ASP PHE GLU ILE GLY ARG PRO LEU SEQRES 2 A 265 GLY LYS GLY LYS PHE GLY ASN VAL TYR LEU ALA ARG GLU SEQRES 3 A 265 LYS GLN SER LYS PHE ILE LEU ALA LEU LYS VAL LEU PHE SEQRES 4 A 265 LYS ALA GLN LEU GLU LYS ALA GLY VAL GLU HIS GLN LEU SEQRES 5 A 265 ARG ARG GLU VAL GLU ILE GLN SER HIS LEU ARG HIS PRO SEQRES 6 A 265 ASN ILE LEU ARG LEU TYR GLY TYR PHE HIS ASP ALA THR SEQRES 7 A 265 ARG VAL TYR LEU ILE LEU GLU TYR ALA PRO LEU GLY THR SEQRES 8 A 265 VAL TYR ARG GLU LEU GLN LYS LEU SER LYS PHE ASP GLU SEQRES 9 A 265 GLN ARG THR ALA THR TYR ILE THR GLU LEU ALA ASN ALA SEQRES 10 A 265 LEU SER TYR CYS HIS SER LYS ARG VAL ILE HIS ARG ASP SEQRES 11 A 265 ILE LYS PRO GLU ASN LEU LEU LEU GLY SER ALA GLY GLU SEQRES 12 A 265 LEU LYS ILE ALA ASP PHE GLY TRP SER VAL HIS ALA PRO SEQRES 13 A 265 SER SER ARG ARG THR TPO LEU ALA GLY THR LEU ASP TYR SEQRES 14 A 265 LEU PRO PRO GLU MET ILE GLU GLY ARG MET HIS ASP GLU SEQRES 15 A 265 LYS VAL ASP LEU TRP SER LEU GLY VAL LEU CYS TYR GLU SEQRES 16 A 265 PHE LEU VAL GLY LYS PRO PRO PHE GLU ALA ASN THR TYR SEQRES 17 A 265 GLN GLU THR TYR LYS ARG ILE SER ARG VAL GLU PHE THR SEQRES 18 A 265 PHE PRO ASP PHE VAL THR GLU GLY ALA ARG ASP LEU ILE SEQRES 19 A 265 SER ARG LEU LEU LYS HIS ASN PRO SER GLN ARG PRO MET SEQRES 20 A 265 LEU ARG GLU VAL LEU GLU HIS PRO TRP ILE THR ALA ASN SEQRES 21 A 265 SER SER LYS PRO SER MODRES 5OSE TPO A 288 THR MODIFIED RESIDUE HET TPO A 288 11 HET ADP A 401 27 HET MG A 402 1 HET MG A 403 1 HET A98 A 404 13 HETNAM TPO PHOSPHOTHREONINE HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM A98 METHYL ~{N}-(5-ETHYLSULFANYL-1,3,4-THIADIAZOL-2-YL) HETNAM 2 A98 CARBAMATE HETSYN TPO PHOSPHONOTHREONINE FORMUL 1 TPO C4 H10 N O6 P FORMUL 2 ADP C10 H15 N5 O10 P2 FORMUL 3 MG 2(MG 2+) FORMUL 5 A98 C6 H9 N3 O2 S2 FORMUL 6 HOH *116(H2 O) HELIX 1 AA1 ALA A 129 GLU A 131 5 3 HELIX 2 AA2 LYS A 166 GLY A 173 1 8 HELIX 3 AA3 VAL A 174 LEU A 188 1 15 HELIX 4 AA4 THR A 217 SER A 226 1 10 HELIX 5 AA5 ASP A 229 SER A 249 1 21 HELIX 6 AA6 LYS A 258 GLU A 260 5 3 HELIX 7 AA7 PRO A 297 GLU A 302 1 6 HELIX 8 AA8 GLU A 308 GLY A 325 1 18 HELIX 9 AA9 THR A 333 ARG A 343 1 11 HELIX 10 AB1 THR A 353 LEU A 364 1 12 HELIX 11 AB2 ASN A 367 ARG A 371 5 5 HELIX 12 AB3 MET A 373 GLU A 379 1 7 HELIX 13 AB4 HIS A 380 SER A 387 1 8 SHEET 1 AA1 5 PHE A 133 LYS A 141 0 SHEET 2 AA1 5 ASN A 146 GLU A 152 -1 O LEU A 149 N GLY A 136 SHEET 3 AA1 5 ILE A 158 PHE A 165 -1 O LEU A 161 N TYR A 148 SHEET 4 AA1 5 ARG A 205 LEU A 210 -1 O LEU A 210 N ALA A 160 SHEET 5 AA1 5 LEU A 196 HIS A 201 -1 N PHE A 200 O TYR A 207 SHEET 1 AA2 2 VAL A 252 ILE A 253 0 SHEET 2 AA2 2 VAL A 279 HIS A 280 -1 O VAL A 279 N ILE A 253 SHEET 1 AA3 2 LEU A 262 LEU A 264 0 SHEET 2 AA3 2 LEU A 270 ILE A 272 -1 O LYS A 271 N LEU A 263 LINK OD1 ASN A 261 MG MG A 402 1555 1555 2.14 LINK OD1 ASP A 274 MG MG A 403 1555 1555 2.57 LINK OD2 ASP A 274 MG MG A 402 1555 1555 2.03 LINK C THR A 287 N TPO A 288 1555 1555 1.34 LINK C TPO A 288 N LEU A 289 1555 1555 1.33 LINK O1B ADP A 401 MG MG A 403 1555 1555 2.11 LINK O3B ADP A 401 MG MG A 402 1555 1555 2.07 LINK O2A ADP A 401 MG MG A 402 1555 1555 2.04 LINK MG MG A 402 O HOH A 563 1555 1555 2.22 LINK MG MG A 402 O HOH A 565 1555 1555 2.08 LINK MG MG A 403 O HOH A 502 1555 1555 2.12 LINK MG MG A 403 O HOH A 557 1555 1555 2.11 LINK MG MG A 403 O HOH A 579 1555 1555 2.00 LINK MG MG A 403 O HOH A 593 1555 1555 2.02 CISPEP 1 ALA A 281 PRO A 282 0 -2.85 SITE 1 AC1 27 GLY A 140 GLY A 142 LYS A 143 PHE A 144 SITE 2 AC1 27 GLY A 145 VAL A 147 ALA A 160 LYS A 162 SITE 3 AC1 27 LEU A 194 GLU A 211 ALA A 213 THR A 217 SITE 4 AC1 27 GLU A 260 ASN A 261 LEU A 263 ASP A 274 SITE 5 AC1 27 MG A 402 MG A 403 HOH A 517 HOH A 530 SITE 6 AC1 27 HOH A 557 HOH A 563 HOH A 565 HOH A 567 SITE 7 AC1 27 HOH A 572 HOH A 576 HOH A 579 SITE 1 AC2 5 ASN A 261 ASP A 274 ADP A 401 HOH A 563 SITE 2 AC2 5 HOH A 565 SITE 1 AC3 6 ASP A 274 ADP A 401 HOH A 502 HOH A 557 SITE 2 AC3 6 HOH A 579 HOH A 593 SITE 1 AC4 3 TRP A 128 GLU A 152 TYR A 197 CRYST1 81.970 81.970 175.260 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012200 0.007043 0.000000 0.00000 SCALE2 0.000000 0.014087 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005706 0.00000