HEADER TRANSFERASE 17-AUG-17 5OSF TITLE CRYSTAL STRUCTURE OF AURORA-A KINASE IN COMPLEX WITH AN ALLOSTERICALLY TITLE 2 BINDING FRAGMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: AURORA KINASE A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AURORA 2,AURORA/IPL1-RELATED KINASE 1,HARK1,BREAST TUMOR- COMPND 5 AMPLIFIED KINASE,SERINE/THREONINE-PROTEIN KINASE 15,SERINE/THREONINE- COMPND 6 PROTEIN KINASE 6,SERINE/THREONINE-PROTEIN KINASE AURORA-A; COMPND 7 EC: 2.7.11.1; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AURKA, AIK, AIRK1, ARK1, AURA, AYK1, BTAK, IAK1, STK15, STK6; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KINASE, ALLOSTERIC INHIBITOR, FRAGMENT, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR P.J.MCINTYRE,P.M.COLLINS,F.VON DELFT,R.BAYLISS REVDAT 2 29-NOV-17 5OSF 1 JRNL REVDAT 1 01-NOV-17 5OSF 0 JRNL AUTH P.J.MCINTYRE,P.M.COLLINS,L.VRZAL,K.BIRCHALL,L.H.ARNOLD, JRNL AUTH 2 C.MPAMHANGA,P.J.COOMBS,S.G.BURGESS,M.W.RICHARDS,A.WINTER, JRNL AUTH 3 V.VEVERKA,F.V.DELFT,A.MERRITT,R.BAYLISS JRNL TITL CHARACTERIZATION OF THREE DRUGGABLE HOT-SPOTS IN THE JRNL TITL 2 AURORA-A/TPX2 INTERACTION USING BIOCHEMICAL, BIOPHYSICAL, JRNL TITL 3 AND FRAGMENT-BASED APPROACHES. JRNL REF ACS CHEM. BIOL. V. 12 2906 2017 JRNL REFN ESSN 1554-8937 JRNL PMID 29045126 JRNL DOI 10.1021/ACSCHEMBIO.7B00537 REMARK 2 REMARK 2 RESOLUTION. 1.89 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.89 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.15 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 28855 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1445 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.830 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 54.32 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 127 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.5300 22.2596 -12.0538 REMARK 3 T TENSOR REMARK 3 T11: 0.4393 T22: 0.4641 REMARK 3 T33: 0.4569 T12: -0.0196 REMARK 3 T13: 0.0094 T23: -0.1739 REMARK 3 L TENSOR REMARK 3 L11: 0.7019 L22: 0.1688 REMARK 3 L33: 0.0132 L12: 0.0427 REMARK 3 L13: 0.4870 L23: 0.0506 REMARK 3 S TENSOR REMARK 3 S11: -0.0408 S12: 0.0291 S13: -0.1614 REMARK 3 S21: -0.0406 S22: 0.2651 S23: -0.2164 REMARK 3 S31: 0.1951 S32: 0.1159 S33: 0.0006 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 173 THROUGH 187 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.6245 20.7149 -17.0599 REMARK 3 T TENSOR REMARK 3 T11: 0.6711 T22: 0.6548 REMARK 3 T33: 0.5012 T12: 0.0105 REMARK 3 T13: -0.0569 T23: -0.1993 REMARK 3 L TENSOR REMARK 3 L11: 0.1973 L22: 0.1255 REMARK 3 L33: 0.0794 L12: -0.0488 REMARK 3 L13: -0.0274 L23: 0.1336 REMARK 3 S TENSOR REMARK 3 S11: -0.1303 S12: 0.3091 S13: -0.7106 REMARK 3 S21: -0.6287 S22: -0.2744 S23: 0.0594 REMARK 3 S31: -0.2986 S32: -0.9219 S33: -0.0248 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 188 THROUGH 287 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.7732 33.2182 -10.9943 REMARK 3 T TENSOR REMARK 3 T11: 0.4279 T22: 0.4966 REMARK 3 T33: 0.3819 T12: -0.0194 REMARK 3 T13: -0.0487 T23: -0.0551 REMARK 3 L TENSOR REMARK 3 L11: 2.3058 L22: 1.7003 REMARK 3 L33: 0.2080 L12: -0.2563 REMARK 3 L13: -0.1006 L23: 0.4925 REMARK 3 S TENSOR REMARK 3 S11: -0.0701 S12: 0.1625 S13: 0.0360 REMARK 3 S21: -0.1727 S22: 0.1801 S23: -0.0313 REMARK 3 S31: -0.0679 S32: -0.0082 S33: -0.0002 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 289 THROUGH 324 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.0690 32.2623 -3.6827 REMARK 3 T TENSOR REMARK 3 T11: 0.3996 T22: 0.4528 REMARK 3 T33: 0.4533 T12: -0.0238 REMARK 3 T13: -0.0545 T23: -0.0871 REMARK 3 L TENSOR REMARK 3 L11: 0.5626 L22: 0.5082 REMARK 3 L33: 0.6586 L12: 0.0467 REMARK 3 L13: -0.1174 L23: -0.2189 REMARK 3 S TENSOR REMARK 3 S11: -0.0119 S12: 0.2102 S13: 0.2040 REMARK 3 S21: 0.1378 S22: 0.0248 S23: 0.1902 REMARK 3 S31: 0.0122 S32: -0.2732 S33: -0.0001 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 325 THROUGH 342 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.6265 30.3773 7.8144 REMARK 3 T TENSOR REMARK 3 T11: 0.5060 T22: 0.5126 REMARK 3 T33: 0.4548 T12: -0.0151 REMARK 3 T13: 0.1042 T23: -0.0975 REMARK 3 L TENSOR REMARK 3 L11: 0.1038 L22: 0.0929 REMARK 3 L33: 0.2309 L12: -0.0125 REMARK 3 L13: -0.0596 L23: -0.1208 REMARK 3 S TENSOR REMARK 3 S11: -0.4914 S12: -0.6544 S13: 0.0685 REMARK 3 S21: 0.3495 S22: 0.1720 S23: 0.2835 REMARK 3 S31: -0.0822 S32: -0.4200 S33: -0.0046 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 343 THROUGH 391 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.0569 45.4207 -4.3973 REMARK 3 T TENSOR REMARK 3 T11: 0.4319 T22: 0.4587 REMARK 3 T33: 0.5944 T12: 0.0328 REMARK 3 T13: -0.0874 T23: -0.0351 REMARK 3 L TENSOR REMARK 3 L11: 0.8853 L22: 0.9244 REMARK 3 L33: 0.9709 L12: -0.8714 REMARK 3 L13: 0.1563 L23: 0.4444 REMARK 3 S TENSOR REMARK 3 S11: 0.0027 S12: 0.1315 S13: 0.5574 REMARK 3 S21: -0.0140 S22: -0.0371 S23: 0.4665 REMARK 3 S31: -0.4126 S32: -0.4053 S33: -0.0003 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5OSF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1200006284. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9282 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53101 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.890 REMARK 200 RESOLUTION RANGE LOW (A) : 45.152 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.40 REMARK 200 R MERGE (I) : 0.03800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.0900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.89 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 10.71 REMARK 200 R MERGE FOR SHELL (I) : 1.61700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.380 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS, PH 8.5: 0.5 M NACL: 0.2 M REMARK 280 MGCL2: 32.5 % V/V PEG 3350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.40333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 116.80667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 87.60500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 146.00833 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 29.20167 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 58.40333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 116.80667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 146.00833 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 87.60500 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 29.20167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 141 CG CD CE NZ REMARK 470 LYS A 143 CG CD CE NZ REMARK 470 LYS A 171 CG CD CE NZ REMARK 470 ARG A 220 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 339 CG CD CE NZ REMARK 470 GLU A 354 CG CD OE1 OE2 REMARK 470 ARG A 375 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN A 370 O HOH A 501 2.07 REMARK 500 O HOH A 516 O HOH A 579 2.09 REMARK 500 OE1 GLN A 185 O HOH A 502 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PHE A 133 CE1 PHE A 133 CZ 0.129 REMARK 500 GLN A 223 CG GLN A 223 CD 0.200 REMARK 500 GLU A 299 CD GLU A 299 OE1 0.070 REMARK 500 SER A 342 CB SER A 342 OG -0.093 REMARK 500 GLU A 345 CB GLU A 345 CG -0.119 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 161 CB - CG - CD2 ANGL. DEV. = -11.4 DEGREES REMARK 500 LEU A 164 CB - CG - CD1 ANGL. DEV. = 10.4 DEGREES REMARK 500 HIS A 201 CB - CA - C ANGL. DEV. = 13.0 DEGREES REMARK 500 ASP A 229 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 MET A 305 CA - CB - CG ANGL. DEV. = -21.6 DEGREES REMARK 500 MET A 305 CG - SD - CE ANGL. DEV. = 24.1 DEGREES REMARK 500 LEU A 312 CA - CB - CG ANGL. DEV. = -14.4 DEGREES REMARK 500 LEU A 312 CB - CG - CD2 ANGL. DEV. = 12.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 202 12.29 -146.77 REMARK 500 ALA A 203 -24.48 95.14 REMARK 500 SER A 226 -55.48 76.45 REMARK 500 ASP A 256 41.16 -146.18 REMARK 500 ASP A 274 71.33 65.35 REMARK 500 ASP A 307 -159.89 -144.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 261 OD1 REMARK 620 2 ASP A 274 OD2 90.3 REMARK 620 3 ADP A 401 O3B 178.6 88.5 REMARK 620 4 ADP A 401 O2A 89.6 95.2 89.9 REMARK 620 5 HOH A 544 O 94.7 95.1 86.1 168.8 REMARK 620 6 HOH A 562 O 86.5 175.6 94.8 87.7 82.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 274 OD1 REMARK 620 2 ADP A 401 O1B 82.1 REMARK 620 3 HOH A 516 O 137.1 69.7 REMARK 620 4 HOH A 524 O 78.0 82.7 67.2 REMARK 620 5 HOH A 579 O 164.6 113.2 55.3 105.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue A9E A 404 DBREF 5OSF A 127 391 UNP O14965 AURKA_HUMAN 127 391 SEQADV 5OSF ALA A 290 UNP O14965 CYS 290 CONFLICT SEQRES 1 A 265 GLN TRP ALA LEU GLU ASP PHE GLU ILE GLY ARG PRO LEU SEQRES 2 A 265 GLY LYS GLY LYS PHE GLY ASN VAL TYR LEU ALA ARG GLU SEQRES 3 A 265 LYS GLN SER LYS PHE ILE LEU ALA LEU LYS VAL LEU PHE SEQRES 4 A 265 LYS ALA GLN LEU GLU LYS ALA GLY VAL GLU HIS GLN LEU SEQRES 5 A 265 ARG ARG GLU VAL GLU ILE GLN SER HIS LEU ARG HIS PRO SEQRES 6 A 265 ASN ILE LEU ARG LEU TYR GLY TYR PHE HIS ASP ALA THR SEQRES 7 A 265 ARG VAL TYR LEU ILE LEU GLU TYR ALA PRO LEU GLY THR SEQRES 8 A 265 VAL TYR ARG GLU LEU GLN LYS LEU SER LYS PHE ASP GLU SEQRES 9 A 265 GLN ARG THR ALA THR TYR ILE THR GLU LEU ALA ASN ALA SEQRES 10 A 265 LEU SER TYR CYS HIS SER LYS ARG VAL ILE HIS ARG ASP SEQRES 11 A 265 ILE LYS PRO GLU ASN LEU LEU LEU GLY SER ALA GLY GLU SEQRES 12 A 265 LEU LYS ILE ALA ASP PHE GLY TRP SER VAL HIS ALA PRO SEQRES 13 A 265 SER SER ARG ARG THR TPO LEU ALA GLY THR LEU ASP TYR SEQRES 14 A 265 LEU PRO PRO GLU MET ILE GLU GLY ARG MET HIS ASP GLU SEQRES 15 A 265 LYS VAL ASP LEU TRP SER LEU GLY VAL LEU CYS TYR GLU SEQRES 16 A 265 PHE LEU VAL GLY LYS PRO PRO PHE GLU ALA ASN THR TYR SEQRES 17 A 265 GLN GLU THR TYR LYS ARG ILE SER ARG VAL GLU PHE THR SEQRES 18 A 265 PHE PRO ASP PHE VAL THR GLU GLY ALA ARG ASP LEU ILE SEQRES 19 A 265 SER ARG LEU LEU LYS HIS ASN PRO SER GLN ARG PRO MET SEQRES 20 A 265 LEU ARG GLU VAL LEU GLU HIS PRO TRP ILE THR ALA ASN SEQRES 21 A 265 SER SER LYS PRO SER MODRES 5OSF TPO A 288 THR MODIFIED RESIDUE HET TPO A 288 11 HET ADP A 401 27 HET MG A 402 1 HET MG A 403 1 HET A9E A 404 18 HETNAM TPO PHOSPHOTHREONINE HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM A9E 2-(4-ETHYLPHENOXY)-1-PIPERIDIN-1-YL-ETHANONE HETSYN TPO PHOSPHONOTHREONINE FORMUL 1 TPO C4 H10 N O6 P FORMUL 2 ADP C10 H15 N5 O10 P2 FORMUL 3 MG 2(MG 2+) FORMUL 5 A9E C15 H21 N O2 FORMUL 6 HOH *84(H2 O) HELIX 1 AA1 ALA A 129 GLU A 131 5 3 HELIX 2 AA2 LYS A 166 GLY A 173 1 8 HELIX 3 AA3 VAL A 174 LEU A 188 1 15 HELIX 4 AA4 THR A 217 SER A 226 1 10 HELIX 5 AA5 ASP A 229 SER A 249 1 21 HELIX 6 AA6 LYS A 258 GLU A 260 5 3 HELIX 7 AA7 PRO A 297 GLU A 302 1 6 HELIX 8 AA8 GLU A 308 GLY A 325 1 18 HELIX 9 AA9 THR A 333 ARG A 343 1 11 HELIX 10 AB1 THR A 353 LEU A 364 1 12 HELIX 11 AB2 ASN A 367 ARG A 371 5 5 HELIX 12 AB3 MET A 373 GLU A 379 1 7 HELIX 13 AB4 HIS A 380 SER A 387 1 8 SHEET 1 AA1 5 PHE A 133 LYS A 141 0 SHEET 2 AA1 5 ASN A 146 GLU A 152 -1 O LEU A 149 N GLY A 136 SHEET 3 AA1 5 ILE A 158 PHE A 165 -1 O LEU A 161 N TYR A 148 SHEET 4 AA1 5 ARG A 205 LEU A 210 -1 O LEU A 210 N ALA A 160 SHEET 5 AA1 5 LEU A 196 HIS A 201 -1 N GLY A 198 O ILE A 209 SHEET 1 AA2 2 VAL A 252 ILE A 253 0 SHEET 2 AA2 2 VAL A 279 HIS A 280 -1 O VAL A 279 N ILE A 253 SHEET 1 AA3 2 LEU A 262 LEU A 264 0 SHEET 2 AA3 2 LEU A 270 ILE A 272 -1 O LYS A 271 N LEU A 263 LINK OD1 ASN A 261 MG MG A 402 1555 1555 2.11 LINK OD1 ASP A 274 MG MG A 403 1555 1555 2.79 LINK OD2 ASP A 274 MG MG A 402 1555 1555 2.09 LINK C THR A 287 N TPO A 288 1555 1555 1.34 LINK C TPO A 288 N LEU A 289 1555 1555 1.36 LINK O1B ADP A 401 MG MG A 403 1555 1555 2.27 LINK O3B ADP A 401 MG MG A 402 1555 1555 2.03 LINK O2A ADP A 401 MG MG A 402 1555 1555 2.14 LINK MG MG A 402 O HOH A 544 1555 1555 2.16 LINK MG MG A 402 O HOH A 562 1555 1555 2.20 LINK MG MG A 403 O HOH A 516 1555 1555 2.21 LINK MG MG A 403 O HOH A 524 1555 1555 2.44 LINK MG MG A 403 O HOH A 579 1555 1555 2.28 CISPEP 1 ALA A 281 PRO A 282 0 0.57 SITE 1 AC1 25 GLY A 140 GLY A 142 LYS A 143 PHE A 144 SITE 2 AC1 25 GLY A 145 VAL A 147 ALA A 160 LYS A 162 SITE 3 AC1 25 LEU A 194 GLU A 211 ALA A 213 THR A 217 SITE 4 AC1 25 GLU A 260 ASN A 261 LEU A 263 ASP A 274 SITE 5 AC1 25 MG A 402 MG A 403 HOH A 510 HOH A 516 SITE 6 AC1 25 HOH A 544 HOH A 546 HOH A 552 HOH A 562 SITE 7 AC1 25 HOH A 570 SITE 1 AC2 5 ASN A 261 ASP A 274 ADP A 401 HOH A 544 SITE 2 AC2 5 HOH A 562 SITE 1 AC3 5 ASP A 274 ADP A 401 HOH A 516 HOH A 524 SITE 2 AC3 5 HOH A 579 SITE 1 AC4 4 TRP A 128 PHE A 133 PHE A 157 LEU A 159 CRYST1 82.200 82.200 175.210 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012165 0.007024 0.000000 0.00000 SCALE2 0.000000 0.014047 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005707 0.00000