data_5OVC # _entry.id 5OVC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.295 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5OVC WWPDB D_1200006428 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5OVC _pdbx_database_status.recvd_initial_deposition_date 2017-08-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Ponna, S.K.' 1 ? 'Myllykoski, M.' 2 ? 'Boeckers, T.M.' 3 ? 'Kursula, P.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Neurochem.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1471-4159 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 145 _citation.language ? _citation.page_first 449 _citation.page_last 463 _citation.title 'Structural basis for PDZ domain interactions in the post-synaptic density scaffolding protein Shank3.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1111/jnc.14322 _citation.pdbx_database_id_PubMed 29473168 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Ponna, S.K.' 1 primary 'Ruskamo, S.' 2 primary 'Myllykoski, M.' 3 primary 'Keller, C.' 4 primary 'Boeckers, T.M.' 5 primary 'Kursula, P.' 6 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5OVC _cell.details ? _cell.formula_units_Z ? _cell.length_a 51.550 _cell.length_a_esd ? _cell.length_b 51.550 _cell.length_b_esd ? _cell.length_c 81.770 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5OVC _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'SH3 and multiple ankyrin repeat domains protein 3' 10400.004 1 ? ? ? ? 2 polymer syn 'GKAP C terminus, synthetic peptide' 743.829 1 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 water nat water 18.015 131 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Shank3,Proline-rich synapse-associated protein 2,ProSAP2,SPANK-2' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;SVAILQKRDHEGFGFVLRGAKAETPIEEFTPTPAFPALQYLESVDVEGVAWKAGLRTGDFLIEVNGVNVVKVGHKQVVGL IRQGGNRLVMKVVSVT ; ;SVAILQKRDHEGFGFVLRGAKAETPIEEFTPTPAFPALQYLESVDVEGVAWKAGLRTGDFLIEVNGVNVVKVGHKQVVGL IRQGGNRLVMKVVSVT ; A ? 2 'polypeptide(L)' no yes '(ACE)EAQTRL' XEAQTRL B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 VAL n 1 3 ALA n 1 4 ILE n 1 5 LEU n 1 6 GLN n 1 7 LYS n 1 8 ARG n 1 9 ASP n 1 10 HIS n 1 11 GLU n 1 12 GLY n 1 13 PHE n 1 14 GLY n 1 15 PHE n 1 16 VAL n 1 17 LEU n 1 18 ARG n 1 19 GLY n 1 20 ALA n 1 21 LYS n 1 22 ALA n 1 23 GLU n 1 24 THR n 1 25 PRO n 1 26 ILE n 1 27 GLU n 1 28 GLU n 1 29 PHE n 1 30 THR n 1 31 PRO n 1 32 THR n 1 33 PRO n 1 34 ALA n 1 35 PHE n 1 36 PRO n 1 37 ALA n 1 38 LEU n 1 39 GLN n 1 40 TYR n 1 41 LEU n 1 42 GLU n 1 43 SER n 1 44 VAL n 1 45 ASP n 1 46 VAL n 1 47 GLU n 1 48 GLY n 1 49 VAL n 1 50 ALA n 1 51 TRP n 1 52 LYS n 1 53 ALA n 1 54 GLY n 1 55 LEU n 1 56 ARG n 1 57 THR n 1 58 GLY n 1 59 ASP n 1 60 PHE n 1 61 LEU n 1 62 ILE n 1 63 GLU n 1 64 VAL n 1 65 ASN n 1 66 GLY n 1 67 VAL n 1 68 ASN n 1 69 VAL n 1 70 VAL n 1 71 LYS n 1 72 VAL n 1 73 GLY n 1 74 HIS n 1 75 LYS n 1 76 GLN n 1 77 VAL n 1 78 VAL n 1 79 GLY n 1 80 LEU n 1 81 ILE n 1 82 ARG n 1 83 GLN n 1 84 GLY n 1 85 GLY n 1 86 ASN n 1 87 ARG n 1 88 LEU n 1 89 VAL n 1 90 MET n 1 91 LYS n 1 92 VAL n 1 93 VAL n 1 94 SER n 1 95 VAL n 1 96 THR n 2 1 ACE n 2 2 GLU n 2 3 ALA n 2 4 GLN n 2 5 THR n 2 6 ARG n 2 7 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 96 _entity_src_gen.gene_src_common_name 'Norway Rat' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Shank3, Prosap2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Rattus norvegicus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10116 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 7 _pdbx_entity_src_syn.organism_scientific 'Rattus norvegicus' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 10116 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP SHAN3_RAT Q9JLU4 ? 1 ;VAILQKRDHEGFGFVLRGAKAETPIEEFTPTPAFPALQYLESVDVEGVAWKAGLRTGDFLIEVNGVNVVKVGHKQVVGLI RQGGNRLVMKVVSVT ; 570 2 PDB 5OVC 5OVC ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5OVC A 2 ? 96 ? Q9JLU4 570 ? 664 ? 580 674 2 2 5OVC B 1 ? 7 ? 5OVC 986 ? 992 ? 986 992 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 5OVC _struct_ref_seq_dif.mon_id SER _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9JLU4 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 579 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5OVC _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.44 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 49.54 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '1.6M sodium citrate pH 6.5' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-05-03 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I04' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9795 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I04 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5OVC _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.55 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 30593 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 22.1 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.126 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.55 _reflns_shell.d_res_low 1.59 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2244 _reflns_shell.percent_possible_all 99.9 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 6.0 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 3.628 _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.132 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5OVC _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.550 _refine.ls_d_res_low 43.608 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 30539 _refine.ls_number_reflns_R_free 1540 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.95 _refine.ls_percent_reflns_R_free 5.04 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1770 _refine.ls_R_factor_R_free 0.2071 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1754 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.32 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 24.01 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.23 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 787 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 131 _refine_hist.number_atoms_total 919 _refine_hist.d_res_high 1.550 _refine_hist.d_res_low 43.608 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.004 ? 842 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.617 ? 1144 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 19.390 ? 505 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.048 ? 130 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.005 ? 152 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.5500 1.6000 . . 141 2614 100.00 . . . 0.4341 . 0.3698 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6000 1.6572 . . 147 2655 100.00 . . . 0.3209 . 0.3310 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6572 1.7236 . . 143 2632 100.00 . . . 0.2374 . 0.2932 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7236 1.8020 . . 135 2625 100.00 . . . 0.2688 . 0.2507 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.8020 1.8970 . . 135 2649 100.00 . . . 0.3163 . 0.2340 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.8970 2.0159 . . 134 2635 100.00 . . . 0.2962 . 0.2140 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0159 2.1715 . . 136 2632 100.00 . . . 0.1977 . 0.1676 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1715 2.3901 . . 140 2640 100.00 . . . 0.2077 . 0.1732 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3901 2.7359 . . 141 2644 100.00 . . . 0.2169 . 0.1520 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7359 3.4467 . . 144 2652 100.00 . . . 0.1503 . 0.1554 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.4467 43.6249 . . 144 2621 100.00 . . . 0.1788 . 0.1407 . . . . . . . . . . # _struct.entry_id 5OVC _struct.title 'PDZ domain from rat Shank3 bound to the C terminus of GKAP' _struct.pdbx_descriptor 'SH3 and multiple ankyrin repeat domains protein 3, GKAP C terminus, synthetic peptide' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5OVC _struct_keywords.text 'PDZ domain, peptide binding, post-synaptic density, C terminus, PROTEIN BINDING' _struct_keywords.pdbx_keywords 'PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 25 ? PHE A 29 ? PRO A 603 PHE A 607 5 ? 5 HELX_P HELX_P2 AA2 GLY A 48 ? ALA A 53 ? GLY A 626 ALA A 631 1 ? 6 HELX_P HELX_P3 AA3 GLY A 73 ? GLY A 84 ? GLY A 651 GLY A 662 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag both _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_comp_id ACE _struct_conn.ptnr1_label_seq_id 1 _struct_conn.ptnr1_label_atom_id C _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id GLU _struct_conn.ptnr2_label_seq_id 2 _struct_conn.ptnr2_label_atom_id N _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id ACE _struct_conn.ptnr1_auth_seq_id 986 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id GLU _struct_conn.ptnr2_auth_seq_id 987 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.332 _struct_conn.pdbx_value_order ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 2 ? GLN A 6 ? VAL A 580 GLN A 584 AA1 2 ARG A 87 ? SER A 94 ? ARG A 665 SER A 672 AA1 3 ASP A 59 ? VAL A 64 ? ASP A 637 VAL A 642 AA1 4 VAL A 67 ? ASN A 68 ? VAL A 645 ASN A 646 AA2 1 GLN A 39 ? VAL A 44 ? GLN A 617 VAL A 622 AA2 2 PHE A 15 ? GLY A 19 ? PHE A 593 GLY A 597 AA2 3 ALA B 3 ? ARG B 6 ? ALA B 988 ARG B 991 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 5 ? N LEU A 583 O LEU A 88 ? O LEU A 666 AA1 2 3 O VAL A 93 ? O VAL A 671 N PHE A 60 ? N PHE A 638 AA1 3 4 N VAL A 64 ? N VAL A 642 O VAL A 67 ? O VAL A 645 AA2 1 2 O TYR A 40 ? O TYR A 618 N ARG A 18 ? N ARG A 596 AA2 2 3 N LEU A 17 ? N LEU A 595 O THR B 5 ? O THR B 990 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id CL _struct_site.pdbx_auth_seq_id 701 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 3 _struct_site.details 'binding site for residue CL A 701' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 LYS A 21 ? LYS A 599 . ? 1_555 ? 2 AC1 3 ALA A 22 ? ALA A 600 . ? 1_555 ? 3 AC1 3 LYS A 75 ? LYS A 653 . ? 1_555 ? # _atom_sites.entry_id 5OVC _atom_sites.fract_transf_matrix[1][1] 0.019399 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019399 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012229 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 579 579 SER SER A . n A 1 2 VAL 2 580 580 VAL VAL A . n A 1 3 ALA 3 581 581 ALA ALA A . n A 1 4 ILE 4 582 582 ILE ILE A . n A 1 5 LEU 5 583 583 LEU LEU A . n A 1 6 GLN 6 584 584 GLN GLN A . n A 1 7 LYS 7 585 585 LYS LYS A . n A 1 8 ARG 8 586 586 ARG ARG A . n A 1 9 ASP 9 587 587 ASP ASP A . n A 1 10 HIS 10 588 588 HIS HIS A . n A 1 11 GLU 11 589 589 GLU GLU A . n A 1 12 GLY 12 590 590 GLY GLY A . n A 1 13 PHE 13 591 591 PHE PHE A . n A 1 14 GLY 14 592 592 GLY GLY A . n A 1 15 PHE 15 593 593 PHE PHE A . n A 1 16 VAL 16 594 594 VAL VAL A . n A 1 17 LEU 17 595 595 LEU LEU A . n A 1 18 ARG 18 596 596 ARG ARG A . n A 1 19 GLY 19 597 597 GLY GLY A . n A 1 20 ALA 20 598 598 ALA ALA A . n A 1 21 LYS 21 599 599 LYS LYS A . n A 1 22 ALA 22 600 600 ALA ALA A . n A 1 23 GLU 23 601 601 GLU GLU A . n A 1 24 THR 24 602 602 THR THR A . n A 1 25 PRO 25 603 603 PRO PRO A . n A 1 26 ILE 26 604 604 ILE ILE A . n A 1 27 GLU 27 605 605 GLU GLU A . n A 1 28 GLU 28 606 606 GLU GLU A . n A 1 29 PHE 29 607 607 PHE PHE A . n A 1 30 THR 30 608 608 THR THR A . n A 1 31 PRO 31 609 609 PRO PRO A . n A 1 32 THR 32 610 610 THR THR A . n A 1 33 PRO 33 611 611 PRO PRO A . n A 1 34 ALA 34 612 612 ALA ALA A . n A 1 35 PHE 35 613 613 PHE PHE A . n A 1 36 PRO 36 614 614 PRO PRO A . n A 1 37 ALA 37 615 615 ALA ALA A . n A 1 38 LEU 38 616 616 LEU LEU A . n A 1 39 GLN 39 617 617 GLN GLN A . n A 1 40 TYR 40 618 618 TYR TYR A . n A 1 41 LEU 41 619 619 LEU LEU A . n A 1 42 GLU 42 620 620 GLU GLU A . n A 1 43 SER 43 621 621 SER SER A . n A 1 44 VAL 44 622 622 VAL VAL A . n A 1 45 ASP 45 623 623 ASP ASP A . n A 1 46 VAL 46 624 624 VAL VAL A . n A 1 47 GLU 47 625 625 GLU GLU A . n A 1 48 GLY 48 626 626 GLY GLY A . n A 1 49 VAL 49 627 627 VAL VAL A . n A 1 50 ALA 50 628 628 ALA ALA A . n A 1 51 TRP 51 629 629 TRP TRP A . n A 1 52 LYS 52 630 630 LYS LYS A . n A 1 53 ALA 53 631 631 ALA ALA A . n A 1 54 GLY 54 632 632 GLY GLY A . n A 1 55 LEU 55 633 633 LEU LEU A . n A 1 56 ARG 56 634 634 ARG ARG A . n A 1 57 THR 57 635 635 THR THR A . n A 1 58 GLY 58 636 636 GLY GLY A . n A 1 59 ASP 59 637 637 ASP ASP A . n A 1 60 PHE 60 638 638 PHE PHE A . n A 1 61 LEU 61 639 639 LEU LEU A . n A 1 62 ILE 62 640 640 ILE ILE A . n A 1 63 GLU 63 641 641 GLU GLU A . n A 1 64 VAL 64 642 642 VAL VAL A . n A 1 65 ASN 65 643 643 ASN ASN A . n A 1 66 GLY 66 644 644 GLY GLY A . n A 1 67 VAL 67 645 645 VAL VAL A . n A 1 68 ASN 68 646 646 ASN ASN A . n A 1 69 VAL 69 647 647 VAL VAL A . n A 1 70 VAL 70 648 648 VAL VAL A . n A 1 71 LYS 71 649 649 LYS LYS A . n A 1 72 VAL 72 650 650 VAL VAL A . n A 1 73 GLY 73 651 651 GLY GLY A . n A 1 74 HIS 74 652 652 HIS HIS A . n A 1 75 LYS 75 653 653 LYS LYS A . n A 1 76 GLN 76 654 654 GLN GLN A . n A 1 77 VAL 77 655 655 VAL VAL A . n A 1 78 VAL 78 656 656 VAL VAL A . n A 1 79 GLY 79 657 657 GLY GLY A . n A 1 80 LEU 80 658 658 LEU LEU A . n A 1 81 ILE 81 659 659 ILE ILE A . n A 1 82 ARG 82 660 660 ARG ARG A . n A 1 83 GLN 83 661 661 GLN GLN A . n A 1 84 GLY 84 662 662 GLY GLY A . n A 1 85 GLY 85 663 663 GLY GLY A . n A 1 86 ASN 86 664 664 ASN ASN A . n A 1 87 ARG 87 665 665 ARG ARG A . n A 1 88 LEU 88 666 666 LEU LEU A . n A 1 89 VAL 89 667 667 VAL VAL A . n A 1 90 MET 90 668 668 MET MET A . n A 1 91 LYS 91 669 669 LYS LYS A . n A 1 92 VAL 92 670 670 VAL VAL A . n A 1 93 VAL 93 671 671 VAL VAL A . n A 1 94 SER 94 672 672 SER SER A . n A 1 95 VAL 95 673 673 VAL VAL A . n A 1 96 THR 96 674 674 THR THR A . n B 2 1 ACE 1 986 986 ACE ACE B . n B 2 2 GLU 2 987 987 GLU GLU B . n B 2 3 ALA 3 988 988 ALA ALA B . n B 2 4 GLN 4 989 989 GLN GLN B . n B 2 5 THR 5 990 990 THR THR B . n B 2 6 ARG 6 991 991 ARG ARG B . n B 2 7 LEU 7 992 992 LEU LEU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CL 1 701 1 CL CL A . D 4 HOH 1 801 77 HOH HOH A . D 4 HOH 2 802 41 HOH HOH A . D 4 HOH 3 803 81 HOH HOH A . D 4 HOH 4 804 70 HOH HOH A . D 4 HOH 5 805 62 HOH HOH A . D 4 HOH 6 806 78 HOH HOH A . D 4 HOH 7 807 24 HOH HOH A . D 4 HOH 8 808 73 HOH HOH A . D 4 HOH 9 809 85 HOH HOH A . D 4 HOH 10 810 63 HOH HOH A . D 4 HOH 11 811 35 HOH HOH A . D 4 HOH 12 812 50 HOH HOH A . D 4 HOH 13 813 47 HOH HOH A . D 4 HOH 14 814 9 HOH HOH A . D 4 HOH 15 815 57 HOH HOH A . D 4 HOH 16 816 33 HOH HOH A . D 4 HOH 17 817 16 HOH HOH A . D 4 HOH 18 818 22 HOH HOH A . D 4 HOH 19 819 133 HOH HOH A . D 4 HOH 20 820 92 HOH HOH A . D 4 HOH 21 821 20 HOH HOH A . D 4 HOH 22 822 34 HOH HOH A . D 4 HOH 23 823 1 HOH HOH A . D 4 HOH 24 824 56 HOH HOH A . D 4 HOH 25 825 97 HOH HOH A . D 4 HOH 26 826 32 HOH HOH A . D 4 HOH 27 827 135 HOH HOH A . D 4 HOH 28 828 26 HOH HOH A . D 4 HOH 29 829 108 HOH HOH A . D 4 HOH 30 830 67 HOH HOH A . D 4 HOH 31 831 74 HOH HOH A . D 4 HOH 32 832 102 HOH HOH A . D 4 HOH 33 833 29 HOH HOH A . D 4 HOH 34 834 2 HOH HOH A . D 4 HOH 35 835 112 HOH HOH A . D 4 HOH 36 836 18 HOH HOH A . D 4 HOH 37 837 111 HOH HOH A . D 4 HOH 38 838 6 HOH HOH A . D 4 HOH 39 839 117 HOH HOH A . D 4 HOH 40 840 61 HOH HOH A . D 4 HOH 41 841 23 HOH HOH A . D 4 HOH 42 842 94 HOH HOH A . D 4 HOH 43 843 87 HOH HOH A . D 4 HOH 44 844 44 HOH HOH A . D 4 HOH 45 845 106 HOH HOH A . D 4 HOH 46 846 100 HOH HOH A . D 4 HOH 47 847 119 HOH HOH A . D 4 HOH 48 848 3 HOH HOH A . D 4 HOH 49 849 53 HOH HOH A . D 4 HOH 50 850 14 HOH HOH A . D 4 HOH 51 851 49 HOH HOH A . D 4 HOH 52 852 46 HOH HOH A . D 4 HOH 53 853 64 HOH HOH A . D 4 HOH 54 854 48 HOH HOH A . D 4 HOH 55 855 65 HOH HOH A . D 4 HOH 56 856 27 HOH HOH A . D 4 HOH 57 857 104 HOH HOH A . D 4 HOH 58 858 89 HOH HOH A . D 4 HOH 59 859 103 HOH HOH A . D 4 HOH 60 860 5 HOH HOH A . D 4 HOH 61 861 60 HOH HOH A . D 4 HOH 62 862 98 HOH HOH A . D 4 HOH 63 863 55 HOH HOH A . D 4 HOH 64 864 59 HOH HOH A . D 4 HOH 65 865 122 HOH HOH A . D 4 HOH 66 866 131 HOH HOH A . D 4 HOH 67 867 120 HOH HOH A . D 4 HOH 68 868 51 HOH HOH A . D 4 HOH 69 869 15 HOH HOH A . D 4 HOH 70 870 80 HOH HOH A . D 4 HOH 71 871 75 HOH HOH A . D 4 HOH 72 872 12 HOH HOH A . D 4 HOH 73 873 28 HOH HOH A . D 4 HOH 74 874 95 HOH HOH A . D 4 HOH 75 875 36 HOH HOH A . D 4 HOH 76 876 115 HOH HOH A . D 4 HOH 77 877 124 HOH HOH A . D 4 HOH 78 878 11 HOH HOH A . D 4 HOH 79 879 39 HOH HOH A . D 4 HOH 80 880 82 HOH HOH A . D 4 HOH 81 881 83 HOH HOH A . D 4 HOH 82 882 17 HOH HOH A . D 4 HOH 83 883 88 HOH HOH A . D 4 HOH 84 884 113 HOH HOH A . D 4 HOH 85 885 134 HOH HOH A . D 4 HOH 86 886 42 HOH HOH A . D 4 HOH 87 887 132 HOH HOH A . D 4 HOH 88 888 68 HOH HOH A . D 4 HOH 89 889 129 HOH HOH A . D 4 HOH 90 890 121 HOH HOH A . D 4 HOH 91 891 136 HOH HOH A . D 4 HOH 92 892 126 HOH HOH A . D 4 HOH 93 893 71 HOH HOH A . D 4 HOH 94 894 90 HOH HOH A . D 4 HOH 95 895 72 HOH HOH A . D 4 HOH 96 896 19 HOH HOH A . D 4 HOH 97 897 118 HOH HOH A . D 4 HOH 98 898 101 HOH HOH A . D 4 HOH 99 899 86 HOH HOH A . D 4 HOH 100 900 128 HOH HOH A . D 4 HOH 101 901 130 HOH HOH A . D 4 HOH 102 902 84 HOH HOH A . D 4 HOH 103 903 99 HOH HOH A . D 4 HOH 104 904 125 HOH HOH A . D 4 HOH 105 905 79 HOH HOH A . D 4 HOH 106 906 109 HOH HOH A . D 4 HOH 107 907 116 HOH HOH A . D 4 HOH 108 908 114 HOH HOH A . D 4 HOH 109 909 91 HOH HOH A . D 4 HOH 110 910 45 HOH HOH A . D 4 HOH 111 911 66 HOH HOH A . D 4 HOH 112 912 38 HOH HOH A . D 4 HOH 113 913 105 HOH HOH A . D 4 HOH 114 914 58 HOH HOH A . D 4 HOH 115 915 43 HOH HOH A . D 4 HOH 116 916 107 HOH HOH A . E 4 HOH 1 1001 4 HOH HOH B . E 4 HOH 2 1002 37 HOH HOH B . E 4 HOH 3 1003 10 HOH HOH B . E 4 HOH 4 1004 21 HOH HOH B . E 4 HOH 5 1005 31 HOH HOH B . E 4 HOH 6 1006 8 HOH HOH B . E 4 HOH 7 1007 7 HOH HOH B . E 4 HOH 8 1008 25 HOH HOH B . E 4 HOH 9 1009 54 HOH HOH B . E 4 HOH 10 1010 30 HOH HOH B . E 4 HOH 11 1011 96 HOH HOH B . E 4 HOH 12 1012 52 HOH HOH B . E 4 HOH 13 1013 40 HOH HOH B . E 4 HOH 14 1014 76 HOH HOH B . E 4 HOH 15 1015 13 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1420 ? 1 MORE -17 ? 1 'SSA (A^2)' 5680 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 875 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-03-07 2 'Structure model' 1 1 2018-07-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 12.0621 -13.8705 -10.0619 0.2009 0.2066 0.2119 0.0007 -0.0261 0.0278 1.6817 1.5346 2.4757 0.6880 -0.9739 -1.0415 0.0543 -0.2336 -0.0651 -0.0164 -0.1784 -0.0956 0.0889 0.2727 0.1188 'X-RAY DIFFRACTION' 2 ? refined -3.5607 -16.1154 -18.7991 0.2234 0.2101 0.1778 -0.0084 -0.0131 -0.0236 3.0981 1.6556 2.8329 0.2560 0.9299 -0.1088 0.1004 -0.0179 0.0576 -0.0536 -0.1191 0.0961 0.1938 -0.3192 0.0112 'X-RAY DIFFRACTION' 3 ? refined -6.7029 -13.9424 -10.7804 0.1949 0.2747 0.1998 -0.0029 0.0032 -0.0286 0.8225 1.9375 2.9230 0.1928 0.8138 0.8916 -0.0099 -0.1954 -0.1607 0.2221 -0.0814 0.1019 0.1338 -0.4794 0.1247 'X-RAY DIFFRACTION' 4 ? refined -0.2086 -5.4816 -12.0686 0.2227 0.2026 0.2540 0.0189 -0.0257 -0.0388 5.2730 2.2102 5.8758 0.8975 2.4761 0.7352 -0.1215 -0.2628 0.6343 -0.0487 -0.2090 -0.0105 -0.4351 -0.1788 0.3612 'X-RAY DIFFRACTION' 5 ? refined 0.8754 -17.9346 -10.2633 0.2596 0.1698 0.2082 0.0201 -0.0142 0.0059 7.2768 5.6493 3.4181 4.4236 2.2269 0.8695 -0.0710 -0.0517 -0.2500 -0.2872 -0.0232 0.0177 0.2058 -0.1128 -0.0227 'X-RAY DIFFRACTION' 6 ? refined 1.6730 -9.9616 -22.4093 0.2416 0.2229 0.1951 0.0134 -0.0152 0.0178 5.7836 0.7427 0.1571 -0.3054 0.8317 0.0662 -0.2420 0.0425 0.0382 -0.1675 0.0812 -0.0084 -0.0666 -0.0576 0.2179 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 579 through 592 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 593 through 636 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 637 through 651 ) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 652 through 662 ) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 663 through 674 ) ; 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 987 through 992 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.11.1_2575: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 HE22 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLN _pdbx_validate_close_contact.auth_seq_id_1 661 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 A _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 803 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.50 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 847 ? ? 1_555 O A HOH 904 ? ? 8_554 1.96 2 1 O A HOH 861 ? ? 1_555 O A HOH 899 ? ? 5_544 2.13 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'CHLORIDE ION' CL 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support SAXS _pdbx_struct_assembly_auth_evidence.details ? #