HEADER SIGNALING PROTEIN 10-SEP-17 5OYJ TITLE CRYSTAL STRUCTURE OF VEGFR-2 DOMAINS 4-5 IN COMPLEX WITH DARPIN D4B COMPND MOL_ID: 1; COMPND 2 MOLECULE: DARPIN D4B; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 2; COMPND 7 CHAIN: C, D; COMPND 8 SYNONYM: VEGFR-2,FETAL LIVER KINASE 1,FLK-1,KINASE INSERT DOMAIN COMPND 9 RECEPTOR,KDR,PROTEIN-TYROSINE KINASE RECEPTOR FLK-1; COMPND 10 EC: 2.7.10.1; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_COMMON: HUMAN; SOURCE 9 ORGANISM_TAXID: 9606; SOURCE 10 GENE: KDR, FLK1, VEGFR2; SOURCE 11 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM_CELL_LINE: HEK-293 EBNA KEYWDS GLYCOPROTEIN RECEPTOR KINASE DESIGNED ANKYRIN REPEAT PROTEIN KEYWDS 2 ANGIOGENESIS, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.L.PISCITELLI,K.M.THIELTGES,S.MARKOVIC-MUELLER,H.K.BINZ,K.BALLMER- AUTHOR 2 HOFER REVDAT 4 17-JAN-24 5OYJ 1 HETSYN REVDAT 3 29-JUL-20 5OYJ 1 COMPND REMARK HET HETNAM REVDAT 3 2 1 HETSYN FORMUL LINK SITE REVDAT 3 3 1 ATOM REVDAT 2 25-JUL-18 5OYJ 1 JRNL REVDAT 1 14-MAR-18 5OYJ 0 JRNL AUTH K.M.THIELTGES,D.AVRAMOVIC,C.L.PISCITELLI,S.MARKOVIC-MUELLER, JRNL AUTH 2 H.K.BINZ,K.BALLMER-HOFER JRNL TITL CHARACTERIZATION OF A DRUG-TARGETABLE ALLOSTERIC SITE JRNL TITL 2 REGULATING VASCULAR ENDOTHELIAL GROWTH FACTOR SIGNALING. JRNL REF ANGIOGENESIS V. 21 533 2018 JRNL REFN ESSN 1573-7209 JRNL PMID 29502220 JRNL DOI 10.1007/S10456-018-9606-9 REMARK 2 REMARK 2 RESOLUTION. 2.38 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_2722: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.38 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.75 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 51496 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 2582 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.7536 - 6.2293 0.99 2947 144 0.1719 0.2419 REMARK 3 2 6.2293 - 4.9476 1.00 2818 161 0.1498 0.1610 REMARK 3 3 4.9476 - 4.3231 1.00 2786 137 0.1179 0.1732 REMARK 3 4 4.3231 - 3.9283 1.00 2782 118 0.1257 0.1611 REMARK 3 5 3.9283 - 3.6470 1.00 2730 171 0.1472 0.1838 REMARK 3 6 3.6470 - 3.4321 0.99 2735 136 0.1743 0.2592 REMARK 3 7 3.4321 - 3.2603 1.00 2736 148 0.1747 0.2483 REMARK 3 8 3.2603 - 3.1184 1.00 2728 135 0.1894 0.2452 REMARK 3 9 3.1184 - 2.9984 1.00 2725 151 0.1949 0.2589 REMARK 3 10 2.9984 - 2.8950 1.00 2707 136 0.2165 0.2533 REMARK 3 11 2.8950 - 2.8045 1.00 2717 147 0.2271 0.2613 REMARK 3 12 2.8045 - 2.7244 0.99 2663 165 0.2339 0.2873 REMARK 3 13 2.7244 - 2.6527 0.99 2703 137 0.2511 0.3097 REMARK 3 14 2.6527 - 2.5879 0.98 2660 145 0.2590 0.3134 REMARK 3 15 2.5879 - 2.5291 0.97 2584 145 0.2931 0.3190 REMARK 3 16 2.5291 - 2.4753 0.96 2634 141 0.3361 0.4005 REMARK 3 17 2.4753 - 2.4258 0.97 2643 132 0.3514 0.3690 REMARK 3 18 2.4258 - 2.3800 0.97 2616 133 0.3612 0.4137 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.460 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 50.83 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 6390 REMARK 3 ANGLE : 1.060 8728 REMARK 3 CHIRALITY : 0.060 1025 REMARK 3 PLANARITY : 0.007 1109 REMARK 3 DIHEDRAL : 18.187 3764 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 27 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 9 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): -44.1167 -10.2200 -25.5509 REMARK 3 T TENSOR REMARK 3 T11: 0.5837 T22: 0.5287 REMARK 3 T33: 0.8327 T12: -0.0298 REMARK 3 T13: 0.1408 T23: -0.0324 REMARK 3 L TENSOR REMARK 3 L11: 3.1981 L22: 2.7294 REMARK 3 L33: 9.5240 L12: 2.6730 REMARK 3 L13: 3.6760 L23: 1.4511 REMARK 3 S TENSOR REMARK 3 S11: 0.7612 S12: -0.6521 S13: 0.0513 REMARK 3 S21: 0.4244 S22: -0.6460 S23: 0.3222 REMARK 3 S31: 0.3526 S32: -0.9685 S33: -0.1068 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 24 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.5606 -13.7473 -33.2823 REMARK 3 T TENSOR REMARK 3 T11: 0.7498 T22: 0.4422 REMARK 3 T33: 0.7954 T12: -0.0371 REMARK 3 T13: 0.1638 T23: 0.0248 REMARK 3 L TENSOR REMARK 3 L11: 3.5927 L22: 8.5054 REMARK 3 L33: 5.3598 L12: 5.4959 REMARK 3 L13: 1.9647 L23: 3.0208 REMARK 3 S TENSOR REMARK 3 S11: -0.5424 S12: 1.0074 S13: -0.4477 REMARK 3 S21: -0.5002 S22: 0.7504 S23: -0.6869 REMARK 3 S31: 0.8533 S32: 0.3911 S33: -0.1899 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 36 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.0526 5.0974 -33.2674 REMARK 3 T TENSOR REMARK 3 T11: 0.3625 T22: 0.3558 REMARK 3 T33: 0.3088 T12: -0.0296 REMARK 3 T13: 0.1177 T23: -0.0513 REMARK 3 L TENSOR REMARK 3 L11: 3.5464 L22: 4.6285 REMARK 3 L33: 1.3237 L12: 0.8871 REMARK 3 L13: 0.4916 L23: -0.6633 REMARK 3 S TENSOR REMARK 3 S11: -0.1809 S12: -0.0489 S13: -0.5608 REMARK 3 S21: 0.2124 S22: 0.1603 S23: 0.1907 REMARK 3 S31: 0.0734 S32: -0.0798 S33: 0.0270 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 126 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.1594 20.8501 -36.9936 REMARK 3 T TENSOR REMARK 3 T11: 0.3043 T22: 0.4443 REMARK 3 T33: 0.2594 T12: -0.0533 REMARK 3 T13: 0.0297 T23: 0.0112 REMARK 3 L TENSOR REMARK 3 L11: 6.5382 L22: 7.7285 REMARK 3 L33: 2.4355 L12: 2.3430 REMARK 3 L13: 2.1738 L23: -1.4741 REMARK 3 S TENSOR REMARK 3 S11: -0.3251 S12: 0.1912 S13: 0.2849 REMARK 3 S21: -0.0771 S22: 0.1635 S23: 0.1343 REMARK 3 S31: -0.3065 S32: -0.0963 S33: 0.1034 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 156 THROUGH 169 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.1342 23.3834 -41.6465 REMARK 3 T TENSOR REMARK 3 T11: 0.4718 T22: 0.5454 REMARK 3 T33: 0.4560 T12: -0.0383 REMARK 3 T13: -0.0018 T23: 0.0415 REMARK 3 L TENSOR REMARK 3 L11: 5.5257 L22: 6.9838 REMARK 3 L33: 5.5116 L12: 3.5584 REMARK 3 L13: 5.2242 L23: 3.3517 REMARK 3 S TENSOR REMARK 3 S11: 0.1011 S12: 0.8479 S13: 0.5511 REMARK 3 S21: -1.0059 S22: 0.3046 S23: 0.6539 REMARK 3 S31: -0.2551 S32: -0.1327 S33: -0.2991 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 13 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): -79.0453 27.6947 -13.1695 REMARK 3 T TENSOR REMARK 3 T11: 0.9195 T22: 0.7519 REMARK 3 T33: 0.5755 T12: -0.1038 REMARK 3 T13: 0.1059 T23: 0.0072 REMARK 3 L TENSOR REMARK 3 L11: 8.6100 L22: 3.3122 REMARK 3 L33: 2.3860 L12: -4.9330 REMARK 3 L13: 0.1364 L23: 0.8996 REMARK 3 S TENSOR REMARK 3 S11: -0.0493 S12: -0.0848 S13: 0.6538 REMARK 3 S21: 1.9052 S22: -0.3905 S23: 0.9825 REMARK 3 S31: 0.3842 S32: -1.0774 S33: 0.4177 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 24 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): -73.9229 30.4431 -5.5252 REMARK 3 T TENSOR REMARK 3 T11: 1.4520 T22: 1.2118 REMARK 3 T33: 0.8283 T12: -0.0678 REMARK 3 T13: 0.0593 T23: 0.1430 REMARK 3 L TENSOR REMARK 3 L11: 5.4050 L22: 5.8239 REMARK 3 L33: 5.7281 L12: 5.1100 REMARK 3 L13: -5.0949 L23: -5.7407 REMARK 3 S TENSOR REMARK 3 S11: 0.5688 S12: -1.7353 S13: -0.1528 REMARK 3 S21: 1.9038 S22: -0.1474 S23: 0.1291 REMARK 3 S31: 0.6942 S32: -0.0454 S33: -0.3927 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 36 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): -73.2074 26.3924 -17.8971 REMARK 3 T TENSOR REMARK 3 T11: 0.7031 T22: 0.4480 REMARK 3 T33: 0.7803 T12: -0.0076 REMARK 3 T13: 0.0010 T23: 0.1827 REMARK 3 L TENSOR REMARK 3 L11: 5.0091 L22: 3.6918 REMARK 3 L33: 9.5077 L12: 0.2090 REMARK 3 L13: 0.1188 L23: -1.3560 REMARK 3 S TENSOR REMARK 3 S11: 0.2401 S12: -0.5750 S13: -0.8811 REMARK 3 S21: 1.2733 S22: 0.1557 S23: 0.9209 REMARK 3 S31: 0.3795 S32: -0.7051 S33: -0.3348 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 60 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): -64.6644 28.1226 -10.2415 REMARK 3 T TENSOR REMARK 3 T11: 0.9245 T22: 0.5993 REMARK 3 T33: 0.6209 T12: -0.0027 REMARK 3 T13: -0.2580 T23: 0.1249 REMARK 3 L TENSOR REMARK 3 L11: 2.7886 L22: 3.5873 REMARK 3 L33: 9.4127 L12: 0.1768 REMARK 3 L13: -2.8779 L23: -4.9825 REMARK 3 S TENSOR REMARK 3 S11: 0.1592 S12: -1.1683 S13: -0.2361 REMARK 3 S21: 2.3169 S22: -0.5356 S23: -1.0117 REMARK 3 S31: 0.5019 S32: 0.7906 S33: 0.2312 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 70 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): -68.3290 22.5970 -25.3296 REMARK 3 T TENSOR REMARK 3 T11: 0.6081 T22: 0.4002 REMARK 3 T33: 0.9624 T12: -0.0868 REMARK 3 T13: -0.1845 T23: 0.1410 REMARK 3 L TENSOR REMARK 3 L11: 6.9924 L22: 5.4474 REMARK 3 L33: 7.6700 L12: -1.5840 REMARK 3 L13: 0.3976 L23: 0.7280 REMARK 3 S TENSOR REMARK 3 S11: 0.5788 S12: -0.0013 S13: -1.2070 REMARK 3 S21: 1.1914 S22: -0.1533 S23: 0.5271 REMARK 3 S31: 0.6052 S32: 0.2998 S33: -0.3092 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 83 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): -60.9762 32.4239 -21.6049 REMARK 3 T TENSOR REMARK 3 T11: 0.6301 T22: 0.4486 REMARK 3 T33: 0.8875 T12: -0.0285 REMARK 3 T13: -0.1894 T23: 0.0425 REMARK 3 L TENSOR REMARK 3 L11: 5.0898 L22: 3.6922 REMARK 3 L33: 2.7481 L12: -3.5331 REMARK 3 L13: 2.2481 L23: -2.9792 REMARK 3 S TENSOR REMARK 3 S11: -0.1301 S12: -0.5024 S13: 0.2662 REMARK 3 S21: 0.9036 S22: -0.0113 S23: 0.0109 REMARK 3 S31: 0.0029 S32: 0.1309 S33: 0.0637 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 102 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): -61.2064 24.4329 -29.9956 REMARK 3 T TENSOR REMARK 3 T11: 0.6553 T22: 0.4705 REMARK 3 T33: 0.9099 T12: -0.0171 REMARK 3 T13: -0.1671 T23: 0.0220 REMARK 3 L TENSOR REMARK 3 L11: 9.2368 L22: 5.6864 REMARK 3 L33: 3.9178 L12: -1.4401 REMARK 3 L13: 5.9034 L23: -0.0659 REMARK 3 S TENSOR REMARK 3 S11: 0.3269 S12: 0.0703 S13: -1.1467 REMARK 3 S21: 0.1989 S22: 0.5316 S23: -0.7999 REMARK 3 S31: -0.0889 S32: 0.0218 S33: -0.9526 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 116 THROUGH 135 ) REMARK 3 ORIGIN FOR THE GROUP (A): -56.2201 35.3214 -29.5647 REMARK 3 T TENSOR REMARK 3 T11: 0.3523 T22: 0.2394 REMARK 3 T33: 0.7539 T12: -0.0059 REMARK 3 T13: -0.0806 T23: -0.0980 REMARK 3 L TENSOR REMARK 3 L11: 6.0700 L22: 6.8572 REMARK 3 L33: 7.0452 L12: -2.1017 REMARK 3 L13: -2.1062 L23: -2.1882 REMARK 3 S TENSOR REMARK 3 S11: -0.1169 S12: -0.1994 S13: -0.2386 REMARK 3 S21: 0.2036 S22: 0.3015 S23: -1.2834 REMARK 3 S31: 0.0475 S32: 0.1969 S33: -0.1699 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 136 THROUGH 148 ) REMARK 3 ORIGIN FOR THE GROUP (A): -57.2218 27.4992 -39.9864 REMARK 3 T TENSOR REMARK 3 T11: 0.4757 T22: 0.5921 REMARK 3 T33: 1.0430 T12: -0.0535 REMARK 3 T13: 0.0087 T23: -0.2339 REMARK 3 L TENSOR REMARK 3 L11: 6.0925 L22: 8.8888 REMARK 3 L33: 6.5539 L12: -1.2571 REMARK 3 L13: -0.2856 L23: -0.6275 REMARK 3 S TENSOR REMARK 3 S11: 0.0482 S12: 0.6615 S13: -0.9035 REMARK 3 S21: -0.0237 S22: 0.4923 S23: -1.6334 REMARK 3 S31: 0.3520 S32: 0.3960 S33: -0.4845 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 149 THROUGH 158 ) REMARK 3 ORIGIN FOR THE GROUP (A): -56.8504 38.6336 -41.5932 REMARK 3 T TENSOR REMARK 3 T11: 0.6222 T22: 0.7369 REMARK 3 T33: 0.9635 T12: -0.0439 REMARK 3 T13: 0.0806 T23: -0.2554 REMARK 3 L TENSOR REMARK 3 L11: 6.5993 L22: 2.9278 REMARK 3 L33: 2.5560 L12: -3.9878 REMARK 3 L13: -3.6361 L23: 1.6744 REMARK 3 S TENSOR REMARK 3 S11: 0.2775 S12: 0.7321 S13: -1.0671 REMARK 3 S21: -0.9339 S22: 0.4261 S23: -1.9634 REMARK 3 S31: 0.3101 S32: -0.3137 S33: -0.6635 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 159 THROUGH 169 ) REMARK 3 ORIGIN FOR THE GROUP (A): -48.6415 39.2224 -37.1898 REMARK 3 T TENSOR REMARK 3 T11: 0.6302 T22: 0.9056 REMARK 3 T33: 1.1970 T12: -0.1462 REMARK 3 T13: 0.0846 T23: -0.1440 REMARK 3 L TENSOR REMARK 3 L11: 4.2541 L22: 4.0743 REMARK 3 L33: 8.4773 L12: -3.9026 REMARK 3 L13: 1.3533 L23: -0.9839 REMARK 3 S TENSOR REMARK 3 S11: 0.6763 S12: 0.3051 S13: 1.5440 REMARK 3 S21: -0.8037 S22: -0.3261 S23: -2.5584 REMARK 3 S31: -0.6058 S32: 1.5590 S33: -0.2774 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 322 THROUGH 338 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.7912 31.3103 -33.7375 REMARK 3 T TENSOR REMARK 3 T11: 0.4477 T22: 0.5318 REMARK 3 T33: 0.4799 T12: 0.0185 REMARK 3 T13: -0.0435 T23: -0.1310 REMARK 3 L TENSOR REMARK 3 L11: 3.3752 L22: 2.8141 REMARK 3 L33: 7.6813 L12: 1.5879 REMARK 3 L13: -1.9420 L23: 1.4682 REMARK 3 S TENSOR REMARK 3 S11: -0.4422 S12: -1.2939 S13: 1.2851 REMARK 3 S21: 0.3077 S22: 0.8569 S23: -0.9532 REMARK 3 S31: 0.3522 S32: 1.0376 S33: -0.3916 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 339 THROUGH 389 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.4574 41.9012 -39.9675 REMARK 3 T TENSOR REMARK 3 T11: 0.4097 T22: 0.3668 REMARK 3 T33: 0.4557 T12: 0.0243 REMARK 3 T13: -0.0065 T23: 0.0653 REMARK 3 L TENSOR REMARK 3 L11: 6.1753 L22: 5.0820 REMARK 3 L33: 1.9091 L12: -3.9357 REMARK 3 L13: -2.1221 L23: 1.4256 REMARK 3 S TENSOR REMARK 3 S11: 0.1186 S12: 0.1351 S13: 0.6001 REMARK 3 S21: -0.3609 S22: 0.0550 S23: -0.0722 REMARK 3 S31: -0.3623 S32: -0.1313 S33: -0.1558 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 390 THROUGH 418 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.8489 35.3267 -36.6101 REMARK 3 T TENSOR REMARK 3 T11: 0.3293 T22: 0.3484 REMARK 3 T33: 0.4533 T12: -0.0290 REMARK 3 T13: 0.0206 T23: -0.0110 REMARK 3 L TENSOR REMARK 3 L11: 8.3675 L22: 4.7728 REMARK 3 L33: 5.5999 L12: -6.0976 REMARK 3 L13: -6.1106 L23: 4.9179 REMARK 3 S TENSOR REMARK 3 S11: -0.1188 S12: -0.1556 S13: 0.2703 REMARK 3 S21: 0.0306 S22: 0.1676 S23: -0.0530 REMARK 3 S31: 0.0350 S32: 0.0393 S33: 0.0487 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 419 THROUGH 433 ) REMARK 3 ORIGIN FOR THE GROUP (A): -45.8888 64.0850 -30.9266 REMARK 3 T TENSOR REMARK 3 T11: 0.6038 T22: 0.5971 REMARK 3 T33: 0.6648 T12: 0.0217 REMARK 3 T13: 0.1122 T23: 0.0922 REMARK 3 L TENSOR REMARK 3 L11: 4.9805 L22: 5.6008 REMARK 3 L33: 3.7192 L12: -3.6984 REMARK 3 L13: -3.5919 L23: 3.6569 REMARK 3 S TENSOR REMARK 3 S11: 1.2772 S12: 1.4663 S13: 0.9520 REMARK 3 S21: -1.3797 S22: -0.9106 S23: -0.6659 REMARK 3 S31: -0.7246 S32: -0.0681 S33: 0.0247 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 434 THROUGH 465 ) REMARK 3 ORIGIN FOR THE GROUP (A): -49.7050 65.4499 -20.8883 REMARK 3 T TENSOR REMARK 3 T11: 0.4515 T22: 0.4859 REMARK 3 T33: 0.4588 T12: 0.0237 REMARK 3 T13: 0.0330 T23: -0.0179 REMARK 3 L TENSOR REMARK 3 L11: 4.0838 L22: 7.2728 REMARK 3 L33: 1.1384 L12: -2.0753 REMARK 3 L13: -0.9606 L23: 2.3673 REMARK 3 S TENSOR REMARK 3 S11: -0.2618 S12: 0.1114 S13: -0.1030 REMARK 3 S21: 0.5817 S22: 0.2680 S23: -0.0330 REMARK 3 S31: 0.2383 S32: 0.0491 S33: 0.0350 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 466 THROUGH 493 ) REMARK 3 ORIGIN FOR THE GROUP (A): -44.4126 74.4872 -19.1891 REMARK 3 T TENSOR REMARK 3 T11: 0.4596 T22: 0.5478 REMARK 3 T33: 0.6408 T12: -0.0407 REMARK 3 T13: 0.0325 T23: -0.0426 REMARK 3 L TENSOR REMARK 3 L11: 2.7199 L22: 9.5096 REMARK 3 L33: 2.1942 L12: -1.6848 REMARK 3 L13: -0.9345 L23: -0.2867 REMARK 3 S TENSOR REMARK 3 S11: -0.2505 S12: -0.4099 S13: 0.0151 REMARK 3 S21: 0.3254 S22: 0.1564 S23: -0.9018 REMARK 3 S31: -0.2342 S32: 0.1860 S33: 0.2172 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 494 THROUGH 525 ) REMARK 3 ORIGIN FOR THE GROUP (A): -53.0462 59.1993 -19.8968 REMARK 3 T TENSOR REMARK 3 T11: 0.5311 T22: 0.4128 REMARK 3 T33: 0.5888 T12: -0.0011 REMARK 3 T13: 0.0306 T23: -0.0069 REMARK 3 L TENSOR REMARK 3 L11: 3.2685 L22: 3.6927 REMARK 3 L33: 1.8390 L12: -1.6578 REMARK 3 L13: -0.6403 L23: 1.4526 REMARK 3 S TENSOR REMARK 3 S11: -0.1346 S12: -0.1311 S13: -0.5538 REMARK 3 S21: 0.9795 S22: 0.1595 S23: 0.0095 REMARK 3 S31: 0.2093 S32: 0.0721 S33: -0.0044 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 526 THROUGH 552 ) REMARK 3 ORIGIN FOR THE GROUP (A): -50.0019 69.1277 -23.4605 REMARK 3 T TENSOR REMARK 3 T11: 0.3666 T22: 0.4119 REMARK 3 T33: 0.4550 T12: -0.0073 REMARK 3 T13: 0.0481 T23: -0.0329 REMARK 3 L TENSOR REMARK 3 L11: 1.0581 L22: 2.5573 REMARK 3 L33: 2.4728 L12: 1.1747 REMARK 3 L13: 0.9727 L23: 1.0437 REMARK 3 S TENSOR REMARK 3 S11: -0.0740 S12: 0.1035 S13: 0.1189 REMARK 3 S21: 0.2847 S22: -0.1315 S23: 0.1587 REMARK 3 S31: -0.0918 S32: 0.0933 S33: -0.0666 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 322 THROUGH 418 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.3829 8.5636 -23.1794 REMARK 3 T TENSOR REMARK 3 T11: 0.5061 T22: 0.3899 REMARK 3 T33: 0.3487 T12: 0.0267 REMARK 3 T13: -0.0331 T23: -0.0003 REMARK 3 L TENSOR REMARK 3 L11: 5.7380 L22: 3.0147 REMARK 3 L33: 6.0991 L12: -0.0964 REMARK 3 L13: -2.4220 L23: 0.7722 REMARK 3 S TENSOR REMARK 3 S11: 0.0710 S12: -0.3264 S13: -0.2858 REMARK 3 S21: 0.4438 S22: 0.0368 S23: -0.3740 REMARK 3 S31: 0.1737 S32: 0.3582 S33: -0.1157 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 419 THROUGH 440 ) REMARK 3 ORIGIN FOR THE GROUP (A): -44.2804 8.3754 17.2493 REMARK 3 T TENSOR REMARK 3 T11: 0.6859 T22: 0.7312 REMARK 3 T33: 0.5074 T12: -0.1101 REMARK 3 T13: 0.0052 T23: -0.0819 REMARK 3 L TENSOR REMARK 3 L11: 0.6082 L22: 2.1474 REMARK 3 L33: 7.1072 L12: 0.6867 REMARK 3 L13: -1.8041 L23: -3.5925 REMARK 3 S TENSOR REMARK 3 S11: -0.4435 S12: 0.4397 S13: -0.4911 REMARK 3 S21: -0.5165 S22: -0.1192 S23: 0.4735 REMARK 3 S31: 0.8870 S32: -0.3803 S33: 0.6232 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 441 THROUGH 553 ) REMARK 3 ORIGIN FOR THE GROUP (A): -45.2407 16.3930 14.0709 REMARK 3 T TENSOR REMARK 3 T11: 0.4833 T22: 0.6924 REMARK 3 T33: 0.4835 T12: -0.0410 REMARK 3 T13: -0.0809 T23: 0.0103 REMARK 3 L TENSOR REMARK 3 L11: 2.1653 L22: 3.2055 REMARK 3 L33: 6.4917 L12: -0.0900 REMARK 3 L13: -2.4555 L23: 0.0586 REMARK 3 S TENSOR REMARK 3 S11: 0.1634 S12: 0.2800 S13: 0.2954 REMARK 3 S21: -0.3969 S22: 0.0212 S23: 0.6777 REMARK 3 S31: -0.0083 S32: -0.2481 S33: -0.1701 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5OYJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-SEP-17. REMARK 100 THE DEPOSITION ID IS D_1200006529. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-MAY-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI(111) MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.26 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52035 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.380 REMARK 200 RESOLUTION RANGE LOW (A) : 55.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 13.20 REMARK 200 R MERGE (I) : 0.13600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.00 REMARK 200 R MERGE FOR SHELL (I) : 2.37000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4BSJ, 2QYJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M CALCIUM ACETATE MONOHYDRATE, 15% REMARK 280 PEG 4000, 0.1 M SODIUM CACODYLATE PH 6.4, CRYOPROTECTED WITH 15% REMARK 280 TREHALOSE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 54.74450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 82.27950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 54.74450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 82.27950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I, J, REMARK 350 AND CHAINS: K, L, M, N REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 AS CAC C 610 LIES ON A SPECIAL POSITION. REMARK 375 HOH C 754 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 GLY A 3 REMARK 465 SER A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 MET B 1 REMARK 465 ARG B 2 REMARK 465 GLY B 3 REMARK 465 SER B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 HIS B 9 REMARK 465 HIS B 10 REMARK 465 GLY B 11 REMARK 465 SER B 12 REMARK 465 PRO C 470 REMARK 465 SER C 471 REMARK 465 GLN C 472 REMARK 465 ALA C 473 REMARK 465 VAL C 474 REMARK 465 SER C 475 REMARK 465 VAL C 476 REMARK 465 THR C 477 REMARK 465 HIS C 553 REMARK 465 HIS C 554 REMARK 465 HIS C 555 REMARK 465 ALA D 467 REMARK 465 ASN D 468 REMARK 465 GLU D 469 REMARK 465 PRO D 470 REMARK 465 SER D 471 REMARK 465 GLN D 472 REMARK 465 ALA D 473 REMARK 465 VAL D 474 REMARK 465 SER D 475 REMARK 465 VAL D 476 REMARK 465 THR D 477 REMARK 465 ASN D 478 REMARK 465 PRO D 479 REMARK 465 TYR D 480 REMARK 465 HIS D 554 REMARK 465 HIS D 555 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 742 O HOH C 768 1.88 REMARK 500 O HOH C 796 O HOH C 797 2.13 REMARK 500 O VAL D 382 O HOH D 701 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 C1 CAC C 610 C2 CAC C 610 2465 0.04 REMARK 500 O1 CAC C 610 O2 CAC C 610 2465 0.12 REMARK 500 AS CAC C 610 O2 CAC C 610 2465 1.74 REMARK 500 AS CAC C 610 O1 CAC C 610 2465 1.74 REMARK 500 C2 CAC C 610 C2 CAC C 610 2465 1.93 REMARK 500 AS CAC C 610 C1 CAC C 610 2465 1.96 REMARK 500 AS CAC C 610 C2 CAC C 610 2465 1.96 REMARK 500 C1 CAC C 610 C1 CAC C 610 2465 1.98 REMARK 500 O HOH B 313 O HOH C 768 4454 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 44 -169.85 -107.94 REMARK 500 ALA C 379 67.81 -110.21 REMARK 500 TYR C 480 67.76 35.65 REMARK 500 ALA D 379 66.53 -111.76 REMARK 500 SER D 427 -5.62 76.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 25 O REMARK 620 2 ASP A 27 OD2 80.5 REMARK 620 3 HOH A 558 O 69.3 80.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 100 O REMARK 620 2 HOH A 526 O 103.6 REMARK 620 3 HOH A 553 O 93.7 162.5 REMARK 620 4 HOH A 560 O 73.2 72.6 115.8 REMARK 620 5 HOH D 712 O 135.9 87.1 78.5 148.9 REMARK 620 6 HOH D 716 O 70.7 82.0 101.6 128.8 68.7 REMARK 620 7 HOH D 722 O 150.6 82.0 84.3 81.3 72.5 138.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 404 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 146 O REMARK 620 2 HOH C 743 O 82.7 REMARK 620 3 NAG F 1 O7 152.3 88.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 160 OD2 REMARK 620 2 HOH C 776 O 97.2 REMARK 620 3 GLU D 326 OE1 87.8 145.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 609 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 502 O REMARK 620 2 HOH A 525 O 73.4 REMARK 620 N 1 DBREF 5OYJ A 1 169 PDB 5OYJ 5OYJ 1 169 DBREF 5OYJ B 1 169 PDB 5OYJ 5OYJ 1 169 DBREF 5OYJ C 326 549 UNP P35968 VGFR2_HUMAN 326 549 DBREF 5OYJ D 326 549 UNP P35968 VGFR2_HUMAN 326 549 SEQADV 5OYJ ALA C 322 UNP P35968 EXPRESSION TAG SEQADV 5OYJ PRO C 323 UNP P35968 EXPRESSION TAG SEQADV 5OYJ LEU C 324 UNP P35968 EXPRESSION TAG SEQADV 5OYJ ALA C 325 UNP P35968 EXPRESSION TAG SEQADV 5OYJ HIS C 550 UNP P35968 EXPRESSION TAG SEQADV 5OYJ HIS C 551 UNP P35968 EXPRESSION TAG SEQADV 5OYJ HIS C 552 UNP P35968 EXPRESSION TAG SEQADV 5OYJ HIS C 553 UNP P35968 EXPRESSION TAG SEQADV 5OYJ HIS C 554 UNP P35968 EXPRESSION TAG SEQADV 5OYJ HIS C 555 UNP P35968 EXPRESSION TAG SEQADV 5OYJ ALA D 322 UNP P35968 EXPRESSION TAG SEQADV 5OYJ PRO D 323 UNP P35968 EXPRESSION TAG SEQADV 5OYJ LEU D 324 UNP P35968 EXPRESSION TAG SEQADV 5OYJ ALA D 325 UNP P35968 EXPRESSION TAG SEQADV 5OYJ HIS D 550 UNP P35968 EXPRESSION TAG SEQADV 5OYJ HIS D 551 UNP P35968 EXPRESSION TAG SEQADV 5OYJ HIS D 552 UNP P35968 EXPRESSION TAG SEQADV 5OYJ HIS D 553 UNP P35968 EXPRESSION TAG SEQADV 5OYJ HIS D 554 UNP P35968 EXPRESSION TAG SEQADV 5OYJ HIS D 555 UNP P35968 EXPRESSION TAG SEQRES 1 A 169 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER ASP SEQRES 2 A 169 LEU GLY LYS LYS LEU LEU GLU ALA ALA ARG ALA GLY GLN SEQRES 3 A 169 ASP ASP GLU VAL ARG ILE LEU MET ALA ASN GLY ALA ASP SEQRES 4 A 169 VAL ASN ALA HIS ASP GLN ASN GLY PHE THR PRO LEU HIS SEQRES 5 A 169 LEU ALA ALA TRP TYR GLY HIS LEU GLU ILE VAL GLY VAL SEQRES 6 A 169 LEU LEU LYS ASN GLY ALA ASP VAL ASN ALA PHE ASP LYS SEQRES 7 A 169 TYR GLY PHE THR PRO LEU HIS LEU ALA ALA GLU GLU GLY SEQRES 8 A 169 HIS LEU GLU VAL VAL GLU VAL LEU LEU LYS TYR GLY ALA SEQRES 9 A 169 ASP VAL ASN ALA LYS ASP GLU HIS GLY SER THR PRO LEU SEQRES 10 A 169 HIS LEU ALA ALA ASP ILE GLY HIS LEU GLU ILE VAL GLU SEQRES 11 A 169 VAL LEU LEU LYS ASN GLY ALA ASP VAL ASN ALA GLN ASP SEQRES 12 A 169 LYS PHE GLY LYS THR ALA PHE ASP ILE SER ILE ASP ASN SEQRES 13 A 169 GLY ASN GLU ASP LEU ALA GLU ILE LEU GLN LYS LEU ASN SEQRES 1 B 169 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER ASP SEQRES 2 B 169 LEU GLY LYS LYS LEU LEU GLU ALA ALA ARG ALA GLY GLN SEQRES 3 B 169 ASP ASP GLU VAL ARG ILE LEU MET ALA ASN GLY ALA ASP SEQRES 4 B 169 VAL ASN ALA HIS ASP GLN ASN GLY PHE THR PRO LEU HIS SEQRES 5 B 169 LEU ALA ALA TRP TYR GLY HIS LEU GLU ILE VAL GLY VAL SEQRES 6 B 169 LEU LEU LYS ASN GLY ALA ASP VAL ASN ALA PHE ASP LYS SEQRES 7 B 169 TYR GLY PHE THR PRO LEU HIS LEU ALA ALA GLU GLU GLY SEQRES 8 B 169 HIS LEU GLU VAL VAL GLU VAL LEU LEU LYS TYR GLY ALA SEQRES 9 B 169 ASP VAL ASN ALA LYS ASP GLU HIS GLY SER THR PRO LEU SEQRES 10 B 169 HIS LEU ALA ALA ASP ILE GLY HIS LEU GLU ILE VAL GLU SEQRES 11 B 169 VAL LEU LEU LYS ASN GLY ALA ASP VAL ASN ALA GLN ASP SEQRES 12 B 169 LYS PHE GLY LYS THR ALA PHE ASP ILE SER ILE ASP ASN SEQRES 13 B 169 GLY ASN GLU ASP LEU ALA GLU ILE LEU GLN LYS LEU ASN SEQRES 1 C 234 ALA PRO LEU ALA GLU LYS PRO PHE VAL ALA PHE GLY SER SEQRES 2 C 234 GLY MET GLU SER LEU VAL GLU ALA THR VAL GLY GLU ARG SEQRES 3 C 234 VAL ARG ILE PRO ALA LYS TYR LEU GLY TYR PRO PRO PRO SEQRES 4 C 234 GLU ILE LYS TRP TYR LYS ASN GLY ILE PRO LEU GLU SER SEQRES 5 C 234 ASN HIS THR ILE LYS ALA GLY HIS VAL LEU THR ILE MET SEQRES 6 C 234 GLU VAL SER GLU ARG ASP THR GLY ASN TYR THR VAL ILE SEQRES 7 C 234 LEU THR ASN PRO ILE SER LYS GLU LYS GLN SER HIS VAL SEQRES 8 C 234 VAL SER LEU VAL VAL TYR VAL PRO PRO GLN ILE GLY GLU SEQRES 9 C 234 LYS SER LEU ILE SER PRO VAL ASP SER TYR GLN TYR GLY SEQRES 10 C 234 THR THR GLN THR LEU THR CYS THR VAL TYR ALA ILE PRO SEQRES 11 C 234 PRO PRO HIS HIS ILE HIS TRP TYR TRP GLN LEU GLU GLU SEQRES 12 C 234 GLU CYS ALA ASN GLU PRO SER GLN ALA VAL SER VAL THR SEQRES 13 C 234 ASN PRO TYR PRO CYS GLU GLU TRP ARG SER VAL GLU ASP SEQRES 14 C 234 PHE GLN GLY GLY ASN LYS ILE GLU VAL ASN LYS ASN GLN SEQRES 15 C 234 PHE ALA LEU ILE GLU GLY LYS ASN LYS THR VAL SER THR SEQRES 16 C 234 LEU VAL ILE GLN ALA ALA ASN VAL SER ALA LEU TYR LYS SEQRES 17 C 234 CYS GLU ALA VAL ASN LYS VAL GLY ARG GLY GLU ARG VAL SEQRES 18 C 234 ILE SER PHE HIS VAL THR ARG HIS HIS HIS HIS HIS HIS SEQRES 1 D 234 ALA PRO LEU ALA GLU LYS PRO PHE VAL ALA PHE GLY SER SEQRES 2 D 234 GLY MET GLU SER LEU VAL GLU ALA THR VAL GLY GLU ARG SEQRES 3 D 234 VAL ARG ILE PRO ALA LYS TYR LEU GLY TYR PRO PRO PRO SEQRES 4 D 234 GLU ILE LYS TRP TYR LYS ASN GLY ILE PRO LEU GLU SER SEQRES 5 D 234 ASN HIS THR ILE LYS ALA GLY HIS VAL LEU THR ILE MET SEQRES 6 D 234 GLU VAL SER GLU ARG ASP THR GLY ASN TYR THR VAL ILE SEQRES 7 D 234 LEU THR ASN PRO ILE SER LYS GLU LYS GLN SER HIS VAL SEQRES 8 D 234 VAL SER LEU VAL VAL TYR VAL PRO PRO GLN ILE GLY GLU SEQRES 9 D 234 LYS SER LEU ILE SER PRO VAL ASP SER TYR GLN TYR GLY SEQRES 10 D 234 THR THR GLN THR LEU THR CYS THR VAL TYR ALA ILE PRO SEQRES 11 D 234 PRO PRO HIS HIS ILE HIS TRP TYR TRP GLN LEU GLU GLU SEQRES 12 D 234 GLU CYS ALA ASN GLU PRO SER GLN ALA VAL SER VAL THR SEQRES 13 D 234 ASN PRO TYR PRO CYS GLU GLU TRP ARG SER VAL GLU ASP SEQRES 14 D 234 PHE GLN GLY GLY ASN LYS ILE GLU VAL ASN LYS ASN GLN SEQRES 15 D 234 PHE ALA LEU ILE GLU GLY LYS ASN LYS THR VAL SER THR SEQRES 16 D 234 LEU VAL ILE GLN ALA ALA ASN VAL SER ALA LEU TYR LYS SEQRES 17 D 234 CYS GLU ALA VAL ASN LYS VAL GLY ARG GLY GLU ARG VAL SEQRES 18 D 234 ILE SER PHE HIS VAL THR ARG HIS HIS HIS HIS HIS HIS HET NAG E 1 14 HET NAG E 2 14 HET NAG F 1 14 HET NAG F 2 14 HET NAG G 1 14 HET NAG G 2 14 HET NAG H 1 14 HET NAG H 2 14 HET NAG I 1 14 HET NAG I 2 14 HET NAG J 1 14 HET NAG J 2 14 HET NAG K 1 14 HET NAG K 2 14 HET GLC L 1 11 HET GLC L 2 12 HET GLC M 1 11 HET GLC M 2 12 HET GLC N 1 11 HET GLC N 2 12 HET CA A 401 1 HET CA A 402 1 HET CA A 403 1 HET NA A 404 1 HET CA C 609 1 HET CAC C 610 5 HET ACT C 611 4 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM CA CALCIUM ION HETNAM NA SODIUM ION HETNAM CAC CACODYLATE ION HETNAM ACT ACETATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN CAC DIMETHYLARSINATE FORMUL 5 NAG 14(C8 H15 N O6) FORMUL 12 GLC 6(C6 H12 O6) FORMUL 15 CA 4(CA 2+) FORMUL 18 NA NA 1+ FORMUL 20 CAC C2 H6 AS O2 1- FORMUL 21 ACT C2 H3 O2 1- FORMUL 22 HOH *270(H2 O) HELIX 1 AA1 GLY A 11 ALA A 24 1 14 HELIX 2 AA2 GLN A 26 ASN A 36 1 11 HELIX 3 AA3 THR A 49 TYR A 57 1 9 HELIX 4 AA4 HIS A 59 ASN A 69 1 11 HELIX 5 AA5 THR A 82 GLY A 91 1 10 HELIX 6 AA6 HIS A 92 TYR A 102 1 11 HELIX 7 AA7 THR A 115 GLY A 124 1 10 HELIX 8 AA8 HIS A 125 ASN A 135 1 11 HELIX 9 AA9 THR A 148 ASN A 156 1 9 HELIX 10 AB1 ASN A 158 LEU A 165 1 8 HELIX 11 AB2 LEU B 14 ALA B 24 1 11 HELIX 12 AB3 GLN B 26 ASN B 36 1 11 HELIX 13 AB4 THR B 49 TYR B 57 1 9 HELIX 14 AB5 HIS B 59 ASN B 69 1 11 HELIX 15 AB6 THR B 82 GLU B 90 1 9 HELIX 16 AB7 HIS B 92 TYR B 102 1 11 HELIX 17 AB8 THR B 115 GLY B 124 1 10 HELIX 18 AB9 HIS B 125 ASN B 135 1 11 HELIX 19 AC1 THR B 148 ASN B 156 1 9 HELIX 20 AC2 ASN B 158 ASN B 169 1 12 HELIX 21 AC3 SER C 389 THR C 393 5 5 HELIX 22 AC4 GLU C 464 CYS C 466 5 3 HELIX 23 AC5 SER D 389 THR D 393 5 5 SHEET 1 AA1 2 PHE C 329 PHE C 332 0 SHEET 2 AA1 2 TYR C 354 TYR C 357 -1 O LEU C 355 N ALA C 331 SHEET 1 AA2 5 LEU C 339 THR C 343 0 SHEET 2 AA2 5 LYS C 408 ILE C 423 1 O TYR C 418 N ALA C 342 SHEET 3 AA2 5 GLN C 441 ILE C 450 -1 O TYR C 448 N GLN C 422 SHEET 4 AA2 5 LYS C 510 ILE C 519 -1 O THR C 513 N VAL C 447 SHEET 5 AA2 5 ILE C 497 VAL C 499 -1 N GLU C 498 O VAL C 518 SHEET 1 AA3 7 ILE C 369 PRO C 370 0 SHEET 2 AA3 7 GLU C 361 LYS C 366 -1 N LYS C 366 O ILE C 369 SHEET 3 AA3 7 GLY C 394 THR C 401 -1 O THR C 401 N GLU C 361 SHEET 4 AA3 7 LYS C 408 ILE C 423 -1 O VAL C 413 N TYR C 396 SHEET 5 AA3 7 GLN C 441 ILE C 450 -1 O TYR C 448 N GLN C 422 SHEET 6 AA3 7 LYS C 510 ILE C 519 -1 O THR C 513 N VAL C 447 SHEET 7 AA3 7 GLN C 503 ILE C 507 -1 N GLN C 503 O VAL C 514 SHEET 1 AA4 3 VAL C 348 PRO C 351 0 SHEET 2 AA4 3 VAL C 382 ILE C 385 -1 O LEU C 383 N ILE C 350 SHEET 3 AA4 3 ILE C 377 ALA C 379 -1 N LYS C 378 O THR C 384 SHEET 1 AA5 5 SER C 434 GLN C 436 0 SHEET 2 AA5 5 GLY C 537 THR C 548 1 O HIS C 546 N TYR C 435 SHEET 3 AA5 5 ALA C 526 ASN C 534 -1 N TYR C 528 O ILE C 543 SHEET 4 AA5 5 HIS C 455 LEU C 462 -1 N HIS C 457 O GLU C 531 SHEET 5 AA5 5 ARG C 486 SER C 487 -1 O ARG C 486 N TRP C 460 SHEET 1 AA6 2 PHE D 329 PHE D 332 0 SHEET 2 AA6 2 TYR D 354 TYR D 357 -1 O LEU D 355 N ALA D 331 SHEET 1 AA7 5 LEU D 339 THR D 343 0 SHEET 2 AA7 5 LYS D 408 ILE D 423 1 O TYR D 418 N ALA D 342 SHEET 3 AA7 5 GLN D 441 ILE D 450 -1 O TYR D 448 N GLN D 422 SHEET 4 AA7 5 ASN D 511 ILE D 519 -1 O ILE D 519 N GLN D 441 SHEET 5 AA7 5 ILE D 497 VAL D 499 -1 N GLU D 498 O VAL D 518 SHEET 1 AA8 7 ILE D 369 PRO D 370 0 SHEET 2 AA8 7 GLU D 361 LYS D 366 -1 N LYS D 366 O ILE D 369 SHEET 3 AA8 7 GLY D 394 THR D 401 -1 O THR D 401 N GLU D 361 SHEET 4 AA8 7 LYS D 408 ILE D 423 -1 O VAL D 413 N TYR D 396 SHEET 5 AA8 7 GLN D 441 ILE D 450 -1 O TYR D 448 N GLN D 422 SHEET 6 AA8 7 ASN D 511 ILE D 519 -1 O ILE D 519 N GLN D 441 SHEET 7 AA8 7 GLN D 503 LEU D 506 -1 N ALA D 505 O LYS D 512 SHEET 1 AA9 3 VAL D 348 PRO D 351 0 SHEET 2 AA9 3 VAL D 382 ILE D 385 -1 O LEU D 383 N ILE D 350 SHEET 3 AA9 3 ILE D 377 ALA D 379 -1 N LYS D 378 O THR D 384 SHEET 1 AB1 5 SER D 434 GLN D 436 0 SHEET 2 AB1 5 GLY D 537 THR D 548 1 O HIS D 546 N TYR D 435 SHEET 3 AB1 5 ALA D 526 ASN D 534 -1 N ALA D 532 O GLY D 539 SHEET 4 AB1 5 HIS D 455 GLN D 461 -1 N GLN D 461 O LEU D 527 SHEET 5 AB1 5 ARG D 486 SER D 487 -1 O ARG D 486 N TRP D 460 SSBOND 1 CYS C 445 CYS C 530 1555 1555 2.06 SSBOND 2 CYS C 466 CYS C 482 1555 1555 2.06 SSBOND 3 CYS D 445 CYS D 530 1555 1555 2.05 SSBOND 4 CYS D 466 CYS D 482 1555 1555 2.03 LINK ND2 ASN C 374 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN C 395 C1 NAG F 1 1555 1555 1.44 LINK ND2 ASN C 511 C1 NAG G 1 1555 1555 1.44 LINK ND2 ASN C 523 C1 NAG H 1 1555 1555 1.44 LINK ND2 ASN D 374 C1 NAG I 1 1555 1555 1.45 LINK ND2 ASN D 395 C1 NAG J 1 1555 1555 1.43 LINK ND2 ASN D 511 C1 NAG K 1 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.45 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.45 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.45 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.45 LINK O4 NAG J 1 C1 NAG J 2 1555 1555 1.45 LINK O4 NAG K 1 C1 NAG K 2 1555 1555 1.44 LINK C1 GLC L 1 O1 GLC L 2 1555 1555 1.43 LINK C1 GLC M 1 O1 GLC M 2 1555 1555 1.44 LINK C1 GLC N 1 O1 GLC N 2 1555 1555 1.43 LINK O GLY A 25 CA CA A 401 1555 1555 2.56 LINK OD2 ASP A 27 CA CA A 401 1555 1555 2.64 LINK O LEU A 100 CA CA A 402 1555 1555 2.27 LINK O GLY A 146 NA NA A 404 1555 1555 2.51 LINK OD2 ASP A 160 CA CA A 403 1555 1555 2.42 LINK CA CA A 401 O HOH A 558 1555 1555 3.00 LINK CA CA A 402 O HOH A 526 1555 1555 2.42 LINK CA CA A 402 O HOH A 553 1555 1555 2.57 LINK CA CA A 402 O HOH A 560 1555 1555 2.99 LINK CA CA A 402 O HOH D 712 1555 1554 2.24 LINK CA CA A 402 O HOH D 716 1555 1554 2.81 LINK CA CA A 402 O HOH D 722 1555 1554 2.40 LINK CA CA A 403 O HOH C 776 1555 1555 2.98 LINK CA CA A 403 OE1 GLU D 326 1555 1555 2.51 LINK NA NA A 404 O HOH C 743 1555 1555 2.33 LINK NA NA A 404 O7 NAG F 1 1555 1555 2.24 LINK O HOH A 502 CA CA C 609 1555 1555 2.64 LINK O HOH A 525 CA CA C 609 1555 1555 2.60 CISPEP 1 TYR C 357 PRO C 358 0 -11.02 CISPEP 2 ILE C 450 PRO C 451 0 -1.68 CISPEP 3 TYR D 357 PRO D 358 0 -12.33 CISPEP 4 ILE D 450 PRO D 451 0 -5.22 CRYST1 109.489 164.559 70.759 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009133 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006077 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014132 0.00000