HEADER DNA BINDING PROTEIN 03-FEB-17 5PC5 TITLE PANDDA ANALYSIS GROUP DEPOSITION -- CRYSTAL STRUCTURE OF BAZ2B AFTER TITLE 2 INITIAL REFINEMENT WITH NO LIGAND MODELLED (STRUCTURE 26) COMPND MOL_ID: 1; COMPND 2 MOLECULE: BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN PROTEIN 2B; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HWALP4; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BAZ2B, KIAA1476; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PANDDA, SGC - DIAMOND I04-1 FRAGMENT SCREENING, BROMODOMAIN, KEYWDS 2 EPIGENETICS, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.M.PEARCE,T.KROJER,R.TALON,A.R.BRADLEY,M.FAIRHEAD,R.SETHI,N.WRIGHT, AUTHOR 2 E.MACLEAN,P.COLLINS,J.BRANDAO-NETO,A.DOUANGAMATH,Z.RENJIE,A.DIAS, AUTHOR 3 M.VOLLMAR,J.NG,P.E.BRENNAN,O.COX,C.BOUNTRA,C.H.ARROWSMITH,A.EDWARDS, AUTHOR 4 F.VON DELFT REVDAT 4 06-MAR-24 5PC5 1 REMARK REVDAT 3 04-OCT-17 5PC5 1 REMARK REVDAT 2 27-SEP-17 5PC5 1 JRNL REMARK REVDAT 1 22-MAR-17 5PC5 0 JRNL AUTH N.M.PEARCE,T.KROJER,A.R.BRADLEY,P.COLLINS,R.P.NOWAK,R.TALON, JRNL AUTH 2 B.D.MARSDEN,S.KELM,J.SHI,C.M.DEANE,F.VON DELFT JRNL TITL A MULTI-CRYSTAL METHOD FOR EXTRACTING OBSCURED JRNL TITL 2 CRYSTALLOGRAPHIC STATES FROM CONVENTIONALLY UNINTERPRETABLE JRNL TITL 3 ELECTRON DENSITY. JRNL REF NAT COMMUN V. 8 15123 2017 JRNL REFN ESSN 2041-1723 JRNL PMID 28436492 JRNL DOI 10.1038/NCOMMS15123 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0131 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.87 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 18565 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 976 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1125 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.06 REMARK 3 BIN R VALUE (WORKING SET) : 0.3290 REMARK 3 BIN FREE R VALUE SET COUNT : 76 REMARK 3 BIN FREE R VALUE : 0.3440 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 930 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 204 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.39000 REMARK 3 B22 (A**2) : -1.76000 REMARK 3 B33 (A**2) : -1.62000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.100 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.107 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.087 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.099 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 968 ; 0.021 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 916 ; 0.007 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1305 ; 1.803 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2126 ; 1.028 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 116 ; 5.872 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 45 ;35.380 ;24.667 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 181 ;11.588 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ;17.885 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 142 ; 0.108 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1064 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 209 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 464 ; 3.321 ; 3.150 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 463 ; 3.321 ; 3.141 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 580 ; 4.483 ; 4.697 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5PC5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1001400477. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9200 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.1.29 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19600 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 28.870 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 70.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : 1.08000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 3G0L REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG600 -- 0.1M MES PH 6.0, PH 7, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.86900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 28.86900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 40.83650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.19050 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 40.83650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.19050 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 28.86900 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 40.83650 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 48.19050 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 28.86900 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 40.83650 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 48.19050 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1835 REMARK 465 HIS A 1836 REMARK 465 HIS A 1837 REMARK 465 HIS A 1838 REMARK 465 HIS A 1839 REMARK 465 HIS A 1840 REMARK 465 HIS A 1841 REMARK 465 SER A 1842 REMARK 465 SER A 1843 REMARK 465 GLY A 1844 REMARK 465 VAL A 1845 REMARK 465 ASP A 1846 REMARK 465 LEU A 1847 REMARK 465 GLY A 1848 REMARK 465 THR A 1849 REMARK 465 GLU A 1850 REMARK 465 ASN A 1851 REMARK 465 LEU A 1852 REMARK 465 TYR A 1853 REMARK 465 PHE A 1854 REMARK 465 GLN A 1855 REMARK 465 VAL A 1971 REMARK 465 SER A 1972 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A1863 CG CD CE NZ REMARK 470 LYS A1868 CE NZ REMARK 470 LYS A1970 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 1945 O HOH A 2101 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A1934 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG A1958 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2300 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH A2301 DISTANCE = 6.28 ANGSTROMS REMARK 525 HOH A2302 DISTANCE = 6.74 ANGSTROMS REMARK 525 HOH A2303 DISTANCE = 7.47 ANGSTROMS REMARK 525 HOH A2304 DISTANCE = 7.47 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 2001 DBREF 5PC5 A 1858 1972 UNP Q9UIF8 BAZ2B_HUMAN 1954 2068 SEQADV 5PC5 MET A 1835 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PC5 HIS A 1836 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PC5 HIS A 1837 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PC5 HIS A 1838 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PC5 HIS A 1839 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PC5 HIS A 1840 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PC5 HIS A 1841 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PC5 SER A 1842 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PC5 SER A 1843 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PC5 GLY A 1844 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PC5 VAL A 1845 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PC5 ASP A 1846 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PC5 LEU A 1847 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PC5 GLY A 1848 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PC5 THR A 1849 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PC5 GLU A 1850 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PC5 ASN A 1851 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PC5 LEU A 1852 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PC5 TYR A 1853 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PC5 PHE A 1854 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PC5 GLN A 1855 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PC5 SER A 1856 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PC5 MET A 1857 UNP Q9UIF8 EXPRESSION TAG SEQRES 1 A 138 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 138 GLY THR GLU ASN LEU TYR PHE GLN SER MET SER VAL LYS SEQRES 3 A 138 LYS PRO LYS ARG ASP ASP SER LYS ASP LEU ALA LEU CYS SEQRES 4 A 138 SER MET ILE LEU THR GLU MET GLU THR HIS GLU ASP ALA SEQRES 5 A 138 TRP PRO PHE LEU LEU PRO VAL ASN LEU LYS LEU VAL PRO SEQRES 6 A 138 GLY TYR LYS LYS VAL ILE LYS LYS PRO MET ASP PHE SER SEQRES 7 A 138 THR ILE ARG GLU LYS LEU SER SER GLY GLN TYR PRO ASN SEQRES 8 A 138 LEU GLU THR PHE ALA LEU ASP VAL ARG LEU VAL PHE ASP SEQRES 9 A 138 ASN CYS GLU THR PHE ASN GLU ASP ASP SER ASP ILE GLY SEQRES 10 A 138 ARG ALA GLY HIS ASN MET ARG LYS TYR PHE GLU LYS LYS SEQRES 11 A 138 TRP THR ASP THR PHE LYS VAL SER HET EDO A2001 4 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO C2 H6 O2 FORMUL 3 HOH *204(H2 O) HELIX 1 AA1 LYS A 1868 HIS A 1883 1 16 HELIX 2 AA2 GLU A 1884 LEU A 1890 5 7 HELIX 3 AA3 GLY A 1900 ILE A 1905 1 6 HELIX 4 AA4 ASP A 1910 SER A 1920 1 11 HELIX 5 AA5 ASN A 1925 ASN A 1944 1 20 HELIX 6 AA6 SER A 1948 LYS A 1970 1 23 SITE 1 AC1 3 ASN A1944 HOH A2128 HOH A2129 CRYST1 81.673 96.381 57.738 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012244 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010375 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017320 0.00000 TER 944 LYS A1970 HETATM 945 C1 EDO A2001 13.988 41.134 29.622 1.00 47.42 C HETATM 946 O1 EDO A2001 13.696 41.635 30.978 1.00 49.51 O HETATM 947 C2 EDO A2001 14.368 39.680 29.735 1.00 40.83 C HETATM 948 O2 EDO A2001 15.655 39.554 30.221 1.00 30.64 O HETATM 949 O HOH A2101 15.540 47.021 42.514 1.00 63.64 O HETATM 950 O HOH A2102 24.397 16.357 36.624 1.00 48.89 O HETATM 951 O HOH A2103 33.351 24.961 28.462 1.00 53.31 O HETATM 952 O HOH A2104 13.440 48.213 39.181 1.00 69.44 O HETATM 953 O HOH A2105 24.238 30.805 39.083 1.00 42.39 O HETATM 954 O HOH A2106 21.735 43.516 40.232 1.00 41.40 O HETATM 955 O HOH A2107 33.286 26.718 26.029 1.00 51.98 O HETATM 956 O HOH A2108 55.341 19.221 14.187 1.00 31.56 O HETATM 957 O HOH A2109 25.482 29.981 12.942 1.00 56.06 O HETATM 958 O HOH A2110 17.746 17.347 36.048 1.00 47.66 O HETATM 959 O HOH A2111 13.933 39.680 47.282 1.00 55.06 O HETATM 960 O HOH A2112 13.818 25.323 22.539 1.00 41.44 O HETATM 961 O HOH A2113 16.936 34.005 17.118 1.00 44.90 O HETATM 962 O HOH A2114 18.869 17.739 13.224 1.00 44.28 O HETATM 963 O HOH A2115 19.642 32.195 42.163 1.00 56.28 O HETATM 964 O HOH A2116 28.565 30.207 33.576 1.00 34.18 O HETATM 965 O HOH A2117 26.147 33.208 19.005 1.00 38.06 O HETATM 966 O HOH A2118 17.542 35.392 21.208 1.00 24.43 O HETATM 967 O HOH A2119 48.563 10.532 20.430 1.00 35.12 O HETATM 968 O HOH A2120 12.230 48.270 28.677 0.50 78.35 O HETATM 969 O HOH A2121 10.283 25.108 31.159 1.00 36.62 O HETATM 970 O HOH A2122 15.947 39.116 21.093 1.00 27.59 O HETATM 971 O HOH A2123 28.525 35.770 27.129 1.00 32.97 O HETATM 972 O HOH A2124 10.591 40.450 39.577 1.00 44.08 O HETATM 973 O HOH A2125 18.488 26.616 11.046 1.00 38.68 O HETATM 974 O HOH A2126 34.363 11.633 25.264 1.00 52.97 O HETATM 975 O HOH A2127 20.513 43.604 19.817 1.00 38.48 O HETATM 976 O HOH A2128 17.985 38.809 29.009 1.00 29.64 O HETATM 977 O HOH A2129 11.364 42.826 31.371 1.00 64.73 O HETATM 978 O HOH A2130 9.947 36.547 20.782 1.00 44.26 O HETATM 979 O HOH A2131 48.602 20.852 23.775 1.00 39.53 O HETATM 980 O HOH A2132 13.911 25.967 18.114 1.00 35.80 O HETATM 981 O HOH A2133 19.032 37.408 24.985 1.00 24.19 O HETATM 982 O HOH A2134 23.069 37.080 18.873 1.00 39.14 O HETATM 983 O HOH A2135 14.734 35.180 26.204 1.00 22.21 O HETATM 984 O HOH A2136 27.441 35.127 37.566 1.00 52.69 O HETATM 985 O HOH A2137 14.502 46.787 22.119 1.00 38.94 O HETATM 986 O HOH A2138 30.177 33.586 30.450 1.00 34.20 O HETATM 987 O HOH A2139 26.722 28.737 43.208 1.00 62.97 O HETATM 988 O HOH A2140 22.268 20.459 37.173 1.00 30.89 O HETATM 989 O HOH A2141 26.657 15.477 42.177 1.00 60.57 O HETATM 990 O HOH A2142 26.261 24.218 39.426 1.00 40.68 O HETATM 991 O HOH A2143 28.751 33.942 19.147 1.00 63.03 O HETATM 992 O HOH A2144 17.689 45.742 43.309 1.00 49.02 O HETATM 993 O HOH A2145 19.671 36.779 41.897 1.00 43.80 O HETATM 994 O HOH A2146 14.431 24.029 16.120 1.00 40.08 O HETATM 995 O HOH A2147 13.620 41.599 35.673 1.00 37.68 O HETATM 996 O HOH A2148 23.732 34.303 36.332 1.00 38.25 O HETATM 997 O HOH A2149 29.343 33.305 26.069 1.00 32.58 O HETATM 998 O HOH A2150 19.894 13.374 22.424 1.00 47.80 O HETATM 999 O HOH A2151 17.301 35.089 26.563 1.00 25.83 O HETATM 1000 O HOH A2152 8.873 36.037 43.574 1.00 47.53 O HETATM 1001 O HOH A2153 10.757 33.149 26.783 1.00 26.39 O HETATM 1002 O HOH A2154 28.877 24.356 12.525 1.00 42.54 O HETATM 1003 O HOH A2155 15.019 21.510 16.264 1.00 45.35 O HETATM 1004 O HOH A2156 14.562 19.951 33.812 1.00 35.49 O HETATM 1005 O HOH A2157 32.376 18.535 20.028 1.00 32.50 O HETATM 1006 O HOH A2158 21.782 35.229 34.616 1.00 23.59 O HETATM 1007 O HOH A2159 41.162 14.482 20.946 1.00 63.52 O HETATM 1008 O HOH A2160 36.421 17.230 21.848 1.00 59.24 O HETATM 1009 O HOH A2161 18.343 45.801 12.948 1.00 62.50 O HETATM 1010 O HOH A2162 28.280 32.587 21.769 1.00 36.14 O HETATM 1011 O HOH A2163 28.793 30.101 20.199 1.00 30.88 O HETATM 1012 O HOH A2164 33.970 21.592 28.446 1.00 61.00 O HETATM 1013 O HOH A2165 22.730 46.829 19.473 1.00 56.53 O HETATM 1014 O HOH A2166 13.708 18.311 23.326 1.00 51.40 O HETATM 1015 O HOH A2167 30.656 23.785 34.298 1.00 37.83 O HETATM 1016 O HOH A2168 19.284 43.592 42.579 1.00 39.74 O HETATM 1017 O HOH A2169 29.361 35.679 33.475 1.00 46.89 O HETATM 1018 O HOH A2170 26.522 37.604 39.203 1.00 54.85 O HETATM 1019 O HOH A2171 18.617 19.494 18.787 1.00 39.31 O HETATM 1020 O HOH A2172 24.586 55.500 19.772 1.00 42.41 O HETATM 1021 O HOH A2173 10.052 39.698 25.111 1.00 34.71 O HETATM 1022 O HOH A2174 16.845 15.550 24.095 1.00 55.30 O HETATM 1023 O HOH A2175 18.687 36.157 28.519 1.00 27.67 O HETATM 1024 O HOH A2176 20.829 39.510 37.198 1.00 28.93 O HETATM 1025 O HOH A2177 50.466 18.108 20.066 1.00 32.19 O HETATM 1026 O HOH A2178 12.358 19.969 25.434 1.00 54.22 O HETATM 1027 O HOH A2179 15.353 43.778 36.704 1.00 43.38 O HETATM 1028 O HOH A2180 11.962 40.476 43.815 1.00 49.90 O HETATM 1029 O HOH A2181 12.723 27.005 24.044 1.00 32.35 O HETATM 1030 O HOH A2182 32.531 17.313 17.465 1.00 36.24 O HETATM 1031 O HOH A2183 6.265 39.041 22.258 1.00 58.53 O HETATM 1032 O HOH A2184 20.134 35.763 18.182 1.00 38.75 O HETATM 1033 O HOH A2185 24.342 46.000 33.008 1.00 33.97 O HETATM 1034 O HOH A2186 22.666 31.468 13.222 1.00 48.59 O HETATM 1035 O HOH A2187 29.136 36.930 22.649 1.00 51.74 O HETATM 1036 O HOH A2188 19.288 29.131 12.197 1.00 34.51 O HETATM 1037 O HOH A2189 14.842 51.788 23.923 1.00 46.13 O HETATM 1038 O HOH A2190 36.200 22.507 16.536 1.00 46.16 O HETATM 1039 O HOH A2191 31.102 12.114 22.804 1.00 41.48 O HETATM 1040 O HOH A2192 17.297 37.579 45.246 1.00 60.27 O HETATM 1041 O HOH A2193 20.607 37.055 36.256 1.00 23.80 O HETATM 1042 O HOH A2194 14.475 31.495 17.503 1.00 58.15 O HETATM 1043 O HOH A2195 16.948 49.305 22.339 1.00 51.42 O HETATM 1044 O HOH A2196 28.447 28.484 16.432 1.00 47.45 O HETATM 1045 O HOH A2197 9.944 24.174 27.133 1.00 47.75 O HETATM 1046 O HOH A2198 32.599 30.190 28.659 1.00 39.54 O HETATM 1047 O HOH A2199 25.787 12.715 18.846 1.00 32.20 O HETATM 1048 O HOH A2200 37.367 15.196 19.961 1.00 59.70 O HETATM 1049 O HOH A2201 23.580 33.054 16.280 1.00 38.26 O HETATM 1050 O HOH A2202 25.761 33.119 38.934 1.00 56.66 O HETATM 1051 O HOH A2203 12.335 40.532 18.378 1.00 43.19 O HETATM 1052 O HOH A2204 28.467 27.572 12.217 1.00 50.84 O HETATM 1053 O HOH A2205 16.864 37.136 23.027 1.00 20.87 O HETATM 1054 O HOH A2206 11.800 39.887 36.795 1.00 32.40 O HETATM 1055 O HOH A2207 10.272 49.171 22.814 1.00 62.99 O HETATM 1056 O HOH A2208 12.313 22.458 37.378 1.00 32.35 O HETATM 1057 O HOH A2209 17.307 15.057 28.541 1.00 58.93 O HETATM 1058 O HOH A2210 25.252 21.814 15.717 1.00 29.22 O HETATM 1059 O HOH A2211 44.038 20.429 22.927 1.00 55.94 O HETATM 1060 O HOH A2212 19.422 30.245 44.321 1.00 47.85 O HETATM 1061 O HOH A2213 9.599 36.947 24.495 1.00 49.75 O HETATM 1062 O HOH A2214 22.076 17.795 37.306 1.00 48.65 O HETATM 1063 O HOH A2215 11.132 35.700 25.815 1.00 38.29 O HETATM 1064 O HOH A2216 7.714 31.594 28.847 1.00 57.78 O HETATM 1065 O HOH A2217 7.032 27.021 42.182 1.00 45.99 O HETATM 1066 O HOH A2218 25.954 42.909 25.094 1.00 35.82 O HETATM 1067 O HOH A2219 33.106 13.556 27.682 1.00 62.36 O HETATM 1068 O HOH A2220 27.905 30.286 17.700 1.00 37.75 O HETATM 1069 O HOH A2221 22.800 30.728 9.777 1.00 63.26 O HETATM 1070 O HOH A2222 8.408 23.189 32.097 1.00 71.08 O HETATM 1071 O HOH A2223 11.758 37.221 28.182 1.00 48.90 O HETATM 1072 O HOH A2224 33.693 24.660 30.902 1.00 53.85 O HETATM 1073 O HOH A2225 27.098 39.560 32.407 1.00 48.27 O HETATM 1074 O HOH A2226 12.310 21.621 22.109 1.00 58.60 O HETATM 1075 O HOH A2227 23.295 44.655 18.199 1.00 58.80 O HETATM 1076 O HOH A2228 30.300 31.986 32.307 1.00 43.83 O HETATM 1077 O HOH A2229 28.650 23.315 38.678 1.00 51.26 O HETATM 1078 O HOH A2230 8.938 27.529 31.653 1.00 36.67 O HETATM 1079 O HOH A2231 17.105 16.027 33.925 1.00 58.71 O HETATM 1080 O HOH A2232 14.583 17.273 33.191 1.00 56.23 O HETATM 1081 O HOH A2233 30.503 33.615 34.515 1.00 50.32 O HETATM 1082 O HOH A2234 10.284 27.166 23.185 1.00 56.74 O HETATM 1083 O HOH A2235 30.608 38.524 30.391 1.00 71.03 O HETATM 1084 O HOH A2236 33.192 23.243 33.174 1.00 48.68 O HETATM 1085 O HOH A2237 33.774 20.341 31.167 1.00 77.76 O HETATM 1086 O HOH A2238 32.823 30.294 31.585 1.00 51.12 O HETATM 1087 O HOH A2239 32.753 28.282 33.294 1.00 54.15 O HETATM 1088 O HOH A2240 7.938 35.220 29.340 1.00 63.06 O HETATM 1089 O HOH A2241 24.878 18.105 43.876 1.00 50.41 O HETATM 1090 O HOH A2242 18.702 29.977 14.619 1.00 50.65 O HETATM 1091 O HOH A2243 19.757 30.731 10.699 1.00 54.69 O HETATM 1092 O HOH A2244 34.771 19.180 20.612 1.00 44.65 O HETATM 1093 O HOH A2245 8.106 31.888 26.317 1.00 47.56 O HETATM 1094 O HOH A2246 29.609 34.286 23.286 1.00 37.15 O HETATM 1095 O HOH A2247 31.553 25.110 36.376 1.00 51.96 O HETATM 1096 O HOH A2248 17.732 36.081 18.554 1.00 28.54 O HETATM 1097 O HOH A2249 9.950 40.890 29.581 1.00 64.15 O HETATM 1098 O HOH A2250 10.254 38.501 19.190 1.00 51.53 O HETATM 1099 O HOH A2251 47.516 19.742 27.850 1.00 46.01 O HETATM 1100 O HOH A2252 10.786 42.621 33.726 1.00 57.83 O HETATM 1101 O HOH A2253 20.276 17.515 17.824 1.00 56.45 O HETATM 1102 O HOH A2254 14.214 20.603 37.762 1.00 44.33 O HETATM 1103 O HOH A2255 22.205 13.008 17.358 1.00 61.50 O HETATM 1104 O HOH A2256 12.132 50.196 21.903 1.00 43.22 O HETATM 1105 O HOH A2257 7.679 36.448 22.298 1.00 50.74 O HETATM 1106 O HOH A2258 31.105 32.572 28.167 1.00 32.74 O HETATM 1107 O HOH A2259 7.233 24.665 34.664 1.00 64.49 O HETATM 1108 O HOH A2260 16.563 14.022 26.488 1.00 56.65 O HETATM 1109 O HOH A2261 7.969 21.059 30.254 1.00 59.22 O HETATM 1110 O HOH A2262 28.781 39.833 30.605 1.00 56.07 O HETATM 1111 O HOH A2263 11.461 39.705 27.796 1.00 44.68 O HETATM 1112 O HOH A2264 14.470 38.913 17.363 1.00 49.54 O HETATM 1113 O HOH A2265 29.512 30.179 36.184 1.00 50.74 O HETATM 1114 O HOH A2266 10.151 37.013 30.032 1.00 52.92 O HETATM 1115 O HOH A2267 7.913 41.242 25.064 1.00 50.65 O HETATM 1116 O HOH A2268 14.875 35.035 16.207 1.00 56.49 O HETATM 1117 O HOH A2269 12.516 24.891 20.244 1.00 37.36 O HETATM 1118 O HOH A2270 28.533 38.487 26.406 1.00 35.44 O HETATM 1119 O HOH A2271 11.102 48.831 17.195 1.00 70.40 O HETATM 1120 O HOH A2272 27.768 39.384 23.837 1.00 33.17 O HETATM 1121 O HOH A2273 19.879 34.378 42.937 1.00 47.75 O HETATM 1122 O HOH A2274 24.990 35.335 18.259 1.00 48.21 O HETATM 1123 O HOH A2275 22.063 38.755 16.763 1.00 50.25 O HETATM 1124 O HOH A2276 16.761 38.690 18.612 1.00 28.10 O HETATM 1125 O HOH A2277 20.030 42.457 17.670 1.00 39.22 O HETATM 1126 O HOH A2278 11.802 22.289 19.513 1.00 60.60 O HETATM 1127 O HOH A2279 9.255 39.060 35.516 1.00 36.55 O HETATM 1128 O HOH A2280 20.586 31.859 14.711 1.00 47.67 O HETATM 1129 O HOH A2281 10.264 23.471 23.229 1.00 68.30 O HETATM 1130 O HOH A2282 29.314 17.437 43.101 1.00 64.34 O HETATM 1131 O HOH A2283 21.425 34.034 16.464 1.00 42.75 O HETATM 1132 O HOH A2284 31.304 28.926 15.473 1.00 55.62 O HETATM 1133 O HOH A2285 31.740 37.022 23.872 1.00 69.98 O HETATM 1134 O HOH A2286 31.295 30.977 19.329 1.00 54.72 O HETATM 1135 O HOH A2287 10.134 26.880 20.567 1.00 43.55 O HETATM 1136 O HOH A2288 31.025 27.595 37.311 1.00 64.46 O HETATM 1137 O HOH A2289 29.338 15.099 42.791 1.00 73.22 O HETATM 1138 O HOH A2290 8.119 28.153 23.823 1.00 54.34 O HETATM 1139 O HOH A2291 12.269 15.411 28.601 1.00 57.33 O HETATM 1140 O HOH A2292 10.959 17.081 27.131 1.00 62.05 O HETATM 1141 O HOH A2293 18.709 40.038 17.266 1.00 37.45 O HETATM 1142 O HOH A2294 9.366 50.879 16.990 1.00 90.96 O HETATM 1143 O HOH A2295 10.083 25.603 16.353 1.00 69.15 O HETATM 1144 O HOH A2296 12.806 36.715 16.903 1.00 58.03 O HETATM 1145 O HOH A2297 31.164 24.804 46.179 1.00 70.16 O HETATM 1146 O HOH A2298 49.438 8.417 24.220 1.00 49.59 O HETATM 1147 O HOH A2299 7.262 29.648 25.475 1.00 45.40 O HETATM 1148 O HOH A2300 8.729 38.647 31.478 1.00 54.68 O HETATM 1149 O HOH A2301 6.370 33.952 24.955 1.00 61.39 O HETATM 1150 O HOH A2302 6.576 28.093 21.688 1.00 56.52 O HETATM 1151 O HOH A2303 5.978 30.275 20.666 1.00 62.06 O HETATM 1152 O HOH A2304 4.961 30.655 23.331 1.00 63.88 O CONECT 945 946 947 CONECT 946 945 CONECT 947 945 948 CONECT 948 947 MASTER 341 0 1 6 0 0 1 6 1138 1 4 11 END