HEADER DNA BINDING PROTEIN 03-FEB-17 5PCG TITLE PANDDA ANALYSIS GROUP DEPOSITION -- CRYSTAL STRUCTURE OF BAZ2B AFTER TITLE 2 INITIAL REFINEMENT WITH NO LIGAND MODELLED (STRUCTURE 37) COMPND MOL_ID: 1; COMPND 2 MOLECULE: BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN PROTEIN 2B; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HWALP4; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BAZ2B, KIAA1476; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PANDDA, SGC - DIAMOND I04-1 FRAGMENT SCREENING, BROMODOMAIN, KEYWDS 2 EPIGENETICS, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.M.PEARCE,T.KROJER,R.TALON,A.R.BRADLEY,M.FAIRHEAD,R.SETHI,N.WRIGHT, AUTHOR 2 E.MACLEAN,P.COLLINS,J.BRANDAO-NETO,A.DOUANGAMATH,Z.RENJIE,A.DIAS, AUTHOR 3 M.VOLLMAR,J.NG,P.E.BRENNAN,O.COX,C.BOUNTRA,C.H.ARROWSMITH,A.EDWARDS, AUTHOR 4 F.VON DELFT REVDAT 4 06-MAR-24 5PCG 1 REMARK REVDAT 3 04-OCT-17 5PCG 1 REMARK REVDAT 2 27-SEP-17 5PCG 1 JRNL REMARK REVDAT 1 22-MAR-17 5PCG 0 JRNL AUTH N.M.PEARCE,T.KROJER,A.R.BRADLEY,P.COLLINS,R.P.NOWAK,R.TALON, JRNL AUTH 2 B.D.MARSDEN,S.KELM,J.SHI,C.M.DEANE,F.VON DELFT JRNL TITL A MULTI-CRYSTAL METHOD FOR EXTRACTING OBSCURED JRNL TITL 2 CRYSTALLOGRAPHIC STATES FROM CONVENTIONALLY UNINTERPRETABLE JRNL TITL 3 ELECTRON DENSITY. JRNL REF NAT COMMUN V. 8 15123 2017 JRNL REFN ESSN 2041-1723 JRNL PMID 28436492 JRNL DOI 10.1038/NCOMMS15123 REMARK 2 REMARK 2 RESOLUTION. 1.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0131 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.23 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 3 NUMBER OF REFLECTIONS : 15172 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 796 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.98 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.03 REMARK 3 REFLECTION IN BIN (WORKING SET) : 623 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 54.98 REMARK 3 BIN R VALUE (WORKING SET) : 0.3530 REMARK 3 BIN FREE R VALUE SET COUNT : 28 REMARK 3 BIN FREE R VALUE : 0.3890 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 930 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 204 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.22000 REMARK 3 B22 (A**2) : -0.67000 REMARK 3 B33 (A**2) : -1.54000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.137 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.138 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.123 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.869 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 968 ; 0.021 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 916 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1305 ; 1.798 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2126 ; 1.075 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 116 ; 6.086 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 45 ;34.624 ;24.667 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 181 ;12.339 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ;19.367 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 142 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1064 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 209 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 464 ; 3.156 ; 3.057 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 463 ; 3.157 ; 3.047 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 580 ; 4.500 ; 4.562 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5PCG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1001400488. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9200 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.1.29 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16036 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.980 REMARK 200 RESOLUTION RANGE LOW (A) : 29.230 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : 0.17100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.98 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 49.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 1.17700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 3G0L REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG600 -- 0.1M MES PH 6.0, PH 7, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 29.23350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 29.23350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 41.36200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.22850 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 41.36200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.22850 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 29.23350 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 41.36200 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 48.22850 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 29.23350 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 41.36200 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 48.22850 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1835 REMARK 465 HIS A 1836 REMARK 465 HIS A 1837 REMARK 465 HIS A 1838 REMARK 465 HIS A 1839 REMARK 465 HIS A 1840 REMARK 465 HIS A 1841 REMARK 465 SER A 1842 REMARK 465 SER A 1843 REMARK 465 GLY A 1844 REMARK 465 VAL A 1845 REMARK 465 ASP A 1846 REMARK 465 LEU A 1847 REMARK 465 GLY A 1848 REMARK 465 THR A 1849 REMARK 465 GLU A 1850 REMARK 465 ASN A 1851 REMARK 465 LEU A 1852 REMARK 465 TYR A 1853 REMARK 465 PHE A 1854 REMARK 465 GLN A 1855 REMARK 465 VAL A 1971 REMARK 465 SER A 1972 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A1863 CG CD CE NZ REMARK 470 LYS A1868 CE NZ REMARK 470 LYS A1970 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 1967 O HOH A 2101 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A1958 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG A1958 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2299 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH A2300 DISTANCE = 6.22 ANGSTROMS REMARK 525 HOH A2301 DISTANCE = 6.77 ANGSTROMS REMARK 525 HOH A2302 DISTANCE = 7.13 ANGSTROMS REMARK 525 HOH A2303 DISTANCE = 7.25 ANGSTROMS REMARK 525 HOH A2304 DISTANCE = 7.36 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 2001 DBREF 5PCG A 1858 1972 UNP Q9UIF8 BAZ2B_HUMAN 1954 2068 SEQADV 5PCG MET A 1835 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PCG HIS A 1836 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PCG HIS A 1837 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PCG HIS A 1838 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PCG HIS A 1839 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PCG HIS A 1840 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PCG HIS A 1841 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PCG SER A 1842 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PCG SER A 1843 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PCG GLY A 1844 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PCG VAL A 1845 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PCG ASP A 1846 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PCG LEU A 1847 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PCG GLY A 1848 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PCG THR A 1849 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PCG GLU A 1850 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PCG ASN A 1851 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PCG LEU A 1852 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PCG TYR A 1853 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PCG PHE A 1854 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PCG GLN A 1855 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PCG SER A 1856 UNP Q9UIF8 EXPRESSION TAG SEQADV 5PCG MET A 1857 UNP Q9UIF8 EXPRESSION TAG SEQRES 1 A 138 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 138 GLY THR GLU ASN LEU TYR PHE GLN SER MET SER VAL LYS SEQRES 3 A 138 LYS PRO LYS ARG ASP ASP SER LYS ASP LEU ALA LEU CYS SEQRES 4 A 138 SER MET ILE LEU THR GLU MET GLU THR HIS GLU ASP ALA SEQRES 5 A 138 TRP PRO PHE LEU LEU PRO VAL ASN LEU LYS LEU VAL PRO SEQRES 6 A 138 GLY TYR LYS LYS VAL ILE LYS LYS PRO MET ASP PHE SER SEQRES 7 A 138 THR ILE ARG GLU LYS LEU SER SER GLY GLN TYR PRO ASN SEQRES 8 A 138 LEU GLU THR PHE ALA LEU ASP VAL ARG LEU VAL PHE ASP SEQRES 9 A 138 ASN CYS GLU THR PHE ASN GLU ASP ASP SER ASP ILE GLY SEQRES 10 A 138 ARG ALA GLY HIS ASN MET ARG LYS TYR PHE GLU LYS LYS SEQRES 11 A 138 TRP THR ASP THR PHE LYS VAL SER HET EDO A2001 4 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO C2 H6 O2 FORMUL 3 HOH *204(H2 O) HELIX 1 AA1 LYS A 1868 HIS A 1883 1 16 HELIX 2 AA2 ALA A 1886 LEU A 1890 5 5 HELIX 3 AA3 GLY A 1900 ILE A 1905 1 6 HELIX 4 AA4 ASP A 1910 SER A 1920 1 11 HELIX 5 AA5 ASN A 1925 ASN A 1944 1 20 HELIX 6 AA6 SER A 1948 PHE A 1969 1 22 SITE 1 AC1 3 ASN A1944 HOH A2116 HOH A2119 CRYST1 82.724 96.457 58.467 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012088 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010367 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017104 0.00000 TER 944 LYS A1970 HETATM 945 C1 EDO A2001 14.471 40.867 29.804 1.00 37.94 C HETATM 946 O1 EDO A2001 14.030 41.537 31.061 1.00 52.94 O HETATM 947 C2 EDO A2001 14.861 39.435 30.130 1.00 35.16 C HETATM 948 O2 EDO A2001 16.136 39.489 30.709 1.00 29.50 O HETATM 949 O HOH A2101 24.915 16.365 37.268 1.00 40.84 O HETATM 950 O HOH A2102 16.078 47.382 43.060 1.00 53.71 O HETATM 951 O HOH A2103 14.106 25.210 22.832 1.00 38.99 O HETATM 952 O HOH A2104 56.149 19.300 14.415 1.00 27.23 O HETATM 953 O HOH A2105 33.729 24.833 28.828 1.00 46.28 O HETATM 954 O HOH A2106 33.977 26.685 26.233 1.00 46.75 O HETATM 955 O HOH A2107 24.589 30.911 39.466 1.00 36.49 O HETATM 956 O HOH A2108 13.738 48.221 39.431 1.00 65.94 O HETATM 957 O HOH A2109 28.950 24.203 12.538 1.00 44.73 O HETATM 958 O HOH A2110 19.710 32.337 42.608 1.00 55.13 O HETATM 959 O HOH A2111 17.720 35.376 21.410 1.00 22.90 O HETATM 960 O HOH A2112 18.589 26.566 11.299 1.00 32.58 O HETATM 961 O HOH A2113 17.997 17.352 36.596 1.00 50.34 O HETATM 962 O HOH A2114 22.253 43.588 40.744 1.00 34.52 O HETATM 963 O HOH A2115 28.899 30.206 34.030 1.00 30.88 O HETATM 964 O HOH A2116 11.852 42.875 31.449 1.00 65.29 O HETATM 965 O HOH A2117 10.595 25.192 31.679 1.00 33.28 O HETATM 966 O HOH A2118 49.239 10.601 20.697 1.00 30.63 O HETATM 967 O HOH A2119 18.325 38.857 29.291 1.00 24.51 O HETATM 968 O HOH A2120 8.058 27.381 34.531 1.00 35.94 O HETATM 969 O HOH A2121 20.163 13.610 22.992 1.00 53.17 O HETATM 970 O HOH A2122 19.134 17.736 13.383 1.00 44.36 O HETATM 971 O HOH A2123 19.613 43.539 43.067 1.00 39.10 O HETATM 972 O HOH A2124 16.205 39.168 21.326 1.00 25.41 O HETATM 973 O HOH A2125 26.429 33.195 19.244 1.00 39.50 O HETATM 974 O HOH A2126 20.687 43.566 20.114 1.00 35.65 O HETATM 975 O HOH A2127 23.386 36.987 19.173 1.00 39.29 O HETATM 976 O HOH A2128 28.908 35.803 27.490 1.00 28.01 O HETATM 977 O HOH A2129 14.686 23.975 16.393 1.00 35.46 O HETATM 978 O HOH A2130 10.737 40.498 40.117 1.00 41.46 O HETATM 979 O HOH A2131 23.079 46.628 19.788 1.00 47.06 O HETATM 980 O HOH A2132 41.575 14.507 21.293 1.00 63.43 O HETATM 981 O HOH A2133 14.064 25.950 18.451 1.00 30.69 O HETATM 982 O HOH A2134 14.341 39.594 48.127 1.00 56.48 O HETATM 983 O HOH A2135 19.240 37.392 25.255 1.00 21.75 O HETATM 984 O HOH A2136 17.081 34.125 17.460 1.00 44.32 O HETATM 985 O HOH A2137 12.251 40.504 44.405 1.00 45.51 O HETATM 986 O HOH A2138 18.475 45.785 13.203 1.00 60.98 O HETATM 987 O HOH A2139 20.407 35.756 18.552 1.00 42.34 O HETATM 988 O HOH A2140 17.632 35.194 26.930 1.00 22.07 O HETATM 989 O HOH A2141 15.687 43.803 37.208 1.00 45.93 O HETATM 990 O HOH A2142 17.213 37.385 45.956 1.00 55.17 O HETATM 991 O HOH A2143 14.888 46.774 22.499 1.00 44.70 O HETATM 992 O HOH A2144 24.149 34.266 36.776 1.00 38.17 O HETATM 993 O HOH A2145 29.590 33.398 26.425 1.00 29.32 O HETATM 994 O HOH A2146 12.405 48.166 29.022 0.50 81.55 O HETATM 995 O HOH A2147 32.826 17.284 17.682 1.00 33.78 O HETATM 996 O HOH A2148 28.898 34.096 19.437 1.00 60.09 O HETATM 997 O HOH A2149 24.990 55.304 20.266 1.00 45.37 O HETATM 998 O HOH A2150 10.824 33.094 27.122 1.00 20.67 O HETATM 999 O HOH A2151 12.601 19.985 25.649 1.00 45.31 O HETATM 1000 O HOH A2152 14.001 41.634 36.258 1.00 38.68 O HETATM 1001 O HOH A2153 12.916 27.002 24.350 1.00 27.64 O HETATM 1002 O HOH A2154 29.555 36.935 22.832 1.00 52.32 O HETATM 1003 O HOH A2155 10.030 36.447 21.128 1.00 38.04 O HETATM 1004 O HOH A2156 30.435 33.393 30.931 1.00 35.65 O HETATM 1005 O HOH A2157 26.809 28.796 43.921 1.00 62.74 O HETATM 1006 O HOH A2158 30.955 23.737 34.689 1.00 38.04 O HETATM 1007 O HOH A2159 32.714 18.589 20.346 1.00 28.58 O HETATM 1008 O HOH A2160 36.818 17.233 22.106 1.00 54.33 O HETATM 1009 O HOH A2161 22.095 35.206 35.022 1.00 24.68 O HETATM 1010 O HOH A2162 22.562 20.549 37.827 1.00 30.07 O HETATM 1011 O HOH A2163 26.621 24.289 40.076 1.00 35.03 O HETATM 1012 O HOH A2164 15.013 35.295 26.571 1.00 19.24 O HETATM 1013 O HOH A2165 26.080 29.533 13.163 1.00 72.50 O HETATM 1014 O HOH A2166 15.047 19.996 34.442 1.00 40.47 O HETATM 1015 O HOH A2167 29.111 30.168 20.450 1.00 30.22 O HETATM 1016 O HOH A2168 25.932 33.281 39.376 1.00 42.19 O HETATM 1017 O HOH A2169 10.283 39.654 25.453 1.00 32.32 O HETATM 1018 O HOH A2170 24.651 46.017 33.437 1.00 32.58 O HETATM 1019 O HOH A2171 33.108 30.150 29.067 1.00 39.45 O HETATM 1020 O HOH A2172 20.862 37.070 36.665 1.00 19.82 O HETATM 1021 O HOH A2173 13.928 18.263 23.615 1.00 52.76 O HETATM 1022 O HOH A2174 26.859 37.475 39.687 1.00 59.02 O HETATM 1023 O HOH A2175 26.976 15.492 42.586 1.00 63.49 O HETATM 1024 O HOH A2176 8.997 36.071 44.278 1.00 46.23 O HETATM 1025 O HOH A2177 28.672 32.570 21.993 1.00 30.57 O HETATM 1026 O HOH A2178 34.911 11.645 25.713 1.00 55.63 O HETATM 1027 O HOH A2179 34.453 21.482 28.707 1.00 66.60 O HETATM 1028 O HOH A2180 6.496 38.664 22.377 1.00 59.63 O HETATM 1029 O HOH A2181 15.112 21.412 16.640 1.00 44.12 O HETATM 1030 O HOH A2182 21.078 39.538 37.664 1.00 29.24 O HETATM 1031 O HOH A2183 18.094 45.987 43.656 1.00 51.16 O HETATM 1032 O HOH A2184 51.134 18.103 20.238 1.00 28.75 O HETATM 1033 O HOH A2185 15.023 51.844 24.290 1.00 39.80 O HETATM 1034 O HOH A2186 18.911 36.213 28.886 1.00 22.83 O HETATM 1035 O HOH A2187 26.133 12.738 19.168 1.00 28.18 O HETATM 1036 O HOH A2188 17.150 15.541 24.406 1.00 54.77 O HETATM 1037 O HOH A2189 10.443 49.257 22.882 1.00 60.99 O HETATM 1038 O HOH A2190 20.078 36.676 42.636 1.00 39.83 O HETATM 1039 O HOH A2191 37.827 15.314 20.217 1.00 51.72 O HETATM 1040 O HOH A2192 28.779 27.508 12.473 1.00 50.81 O HETATM 1041 O HOH A2193 14.507 31.314 18.020 1.00 55.68 O HETATM 1042 O HOH A2194 31.453 12.110 22.908 1.00 41.98 O HETATM 1043 O HOH A2195 12.026 39.861 37.326 1.00 28.14 O HETATM 1044 O HOH A2196 8.750 23.028 32.662 1.00 75.26 O HETATM 1045 O HOH A2197 19.477 29.060 12.551 1.00 33.21 O HETATM 1046 O HOH A2198 18.981 19.370 19.056 1.00 39.99 O HETATM 1047 O HOH A2199 28.721 28.563 16.666 1.00 44.20 O HETATM 1048 O HOH A2200 29.891 35.849 33.896 1.00 46.26 O HETATM 1049 O HOH A2201 25.441 21.814 15.953 1.00 26.11 O HETATM 1050 O HOH A2202 22.336 17.965 37.629 1.00 48.03 O HETATM 1051 O HOH A2203 26.126 42.975 25.324 1.00 34.93 O HETATM 1052 O HOH A2204 17.097 37.140 23.376 1.00 16.05 O HETATM 1053 O HOH A2205 10.179 23.864 27.295 1.00 53.98 O HETATM 1054 O HOH A2206 12.458 40.308 18.849 1.00 46.87 O HETATM 1055 O HOH A2207 27.866 34.699 38.103 1.00 46.06 O HETATM 1056 O HOH A2208 17.270 49.441 22.760 1.00 47.74 O HETATM 1057 O HOH A2209 36.536 22.344 16.691 1.00 54.69 O HETATM 1058 O HOH A2210 12.535 22.474 37.923 1.00 33.84 O HETATM 1059 O HOH A2211 9.837 36.955 24.829 1.00 44.76 O HETATM 1060 O HOH A2212 28.104 30.399 17.922 1.00 40.81 O HETATM 1061 O HOH A2213 19.782 30.404 44.906 1.00 41.73 O HETATM 1062 O HOH A2214 23.759 33.269 16.624 1.00 37.43 O HETATM 1063 O HOH A2215 33.951 13.966 28.146 1.00 59.73 O HETATM 1064 O HOH A2216 23.972 44.527 18.420 1.00 51.11 O HETATM 1065 O HOH A2217 17.492 15.069 29.048 1.00 48.01 O HETATM 1066 O HOH A2218 44.538 20.373 23.079 1.00 48.68 O HETATM 1067 O HOH A2219 22.834 30.587 9.884 1.00 55.39 O HETATM 1068 O HOH A2220 7.073 26.857 42.633 1.00 43.22 O HETATM 1069 O HOH A2221 11.223 35.694 26.158 1.00 34.54 O HETATM 1070 O HOH A2222 12.493 21.408 22.550 1.00 64.13 O HETATM 1071 O HOH A2223 7.644 31.692 29.418 1.00 57.20 O HETATM 1072 O HOH A2224 12.029 37.329 28.710 1.00 41.76 O HETATM 1073 O HOH A2225 23.059 31.817 13.590 1.00 51.48 O HETATM 1074 O HOH A2226 34.215 24.646 31.309 1.00 50.32 O HETATM 1075 O HOH A2227 11.007 40.458 30.191 1.00 88.58 O HETATM 1076 O HOH A2228 30.630 31.928 32.806 1.00 32.79 O HETATM 1077 O HOH A2229 34.134 20.099 31.472 1.00 64.57 O HETATM 1078 O HOH A2230 17.477 15.999 34.319 1.00 59.05 O HETATM 1079 O HOH A2231 29.000 23.362 39.180 1.00 49.68 O HETATM 1080 O HOH A2232 14.932 17.302 33.390 1.00 55.44 O HETATM 1081 O HOH A2233 27.739 39.367 32.978 1.00 45.83 O HETATM 1082 O HOH A2234 9.008 27.525 32.176 1.00 33.34 O HETATM 1083 O HOH A2235 33.664 23.214 33.716 1.00 44.68 O HETATM 1084 O HOH A2236 10.465 26.996 23.693 1.00 58.43 O HETATM 1085 O HOH A2237 18.763 29.797 14.996 1.00 44.90 O HETATM 1086 O HOH A2238 30.818 33.482 35.137 1.00 57.47 O HETATM 1087 O HOH A2239 25.245 18.146 44.431 1.00 48.63 O HETATM 1088 O HOH A2240 30.968 38.563 30.837 1.00 61.05 O HETATM 1089 O HOH A2241 20.083 30.499 10.826 1.00 55.46 O HETATM 1090 O HOH A2242 8.285 32.018 26.777 1.00 43.01 O HETATM 1091 O HOH A2243 33.214 30.374 32.044 1.00 47.67 O HETATM 1092 O HOH A2244 33.254 28.249 33.706 1.00 51.94 O HETATM 1093 O HOH A2245 35.121 19.151 20.879 1.00 36.27 O HETATM 1094 O HOH A2246 48.335 19.616 28.133 1.00 50.98 O HETATM 1095 O HOH A2247 10.350 38.492 19.448 1.00 47.58 O HETATM 1096 O HOH A2248 30.039 34.273 23.537 1.00 34.31 O HETATM 1097 O HOH A2249 7.740 35.297 30.004 1.00 58.58 O HETATM 1098 O HOH A2250 17.814 36.055 18.814 1.00 24.02 O HETATM 1099 O HOH A2251 31.858 25.334 36.865 1.00 50.30 O HETATM 1100 O HOH A2252 22.580 12.826 17.749 1.00 52.33 O HETATM 1101 O HOH A2253 7.674 24.681 35.493 1.00 76.27 O HETATM 1102 O HOH A2254 29.024 39.910 31.141 1.00 54.60 O HETATM 1103 O HOH A2255 31.420 32.573 28.556 1.00 26.69 O HETATM 1104 O HOH A2256 20.545 17.211 18.038 1.00 63.87 O HETATM 1105 O HOH A2257 14.492 20.761 38.268 1.00 44.25 O HETATM 1106 O HOH A2258 8.202 41.006 25.221 1.00 51.14 O HETATM 1107 O HOH A2259 14.690 38.751 17.817 1.00 49.50 O HETATM 1108 O HOH A2260 29.653 30.102 36.600 1.00 51.21 O HETATM 1109 O HOH A2261 11.750 48.501 17.292 1.00 72.58 O HETATM 1110 O HOH A2262 16.884 14.028 26.819 1.00 48.62 O HETATM 1111 O HOH A2263 7.819 36.310 22.606 1.00 49.45 O HETATM 1112 O HOH A2264 10.730 42.416 33.752 1.00 47.10 O HETATM 1113 O HOH A2265 9.987 36.811 30.273 1.00 49.32 O HETATM 1114 O HOH A2266 11.581 39.500 28.025 1.00 44.82 O HETATM 1115 O HOH A2267 12.448 50.272 22.065 1.00 43.12 O HETATM 1116 O HOH A2268 20.063 34.365 43.475 1.00 52.47 O HETATM 1117 O HOH A2269 12.764 24.884 20.509 1.00 31.28 O HETATM 1118 O HOH A2270 28.835 38.451 26.766 1.00 36.74 O HETATM 1119 O HOH A2271 14.875 35.053 16.637 1.00 58.29 O HETATM 1120 O HOH A2272 25.292 35.456 18.564 1.00 44.53 O HETATM 1121 O HOH A2273 8.109 20.844 30.601 1.00 52.48 O HETATM 1122 O HOH A2274 21.685 38.596 17.071 1.00 48.12 O HETATM 1123 O HOH A2275 12.518 15.781 29.340 1.00 67.86 O HETATM 1124 O HOH A2276 12.053 22.293 19.869 1.00 50.50 O HETATM 1125 O HOH A2277 17.015 38.629 18.857 1.00 21.52 O HETATM 1126 O HOH A2278 10.327 27.129 20.943 1.00 42.85 O HETATM 1127 O HOH A2279 28.066 39.248 24.202 1.00 29.98 O HETATM 1128 O HOH A2280 9.496 39.088 36.114 1.00 31.80 O HETATM 1129 O HOH A2281 20.148 42.415 17.924 1.00 39.71 O HETATM 1130 O HOH A2282 31.662 28.824 15.904 1.00 56.58 O HETATM 1131 O HOH A2283 20.706 31.743 14.819 1.00 46.87 O HETATM 1132 O HOH A2284 31.838 30.859 19.757 1.00 61.32 O HETATM 1133 O HOH A2285 32.265 37.189 23.997 1.00 67.93 O HETATM 1134 O HOH A2286 8.343 28.440 24.256 1.00 54.56 O HETATM 1135 O HOH A2287 10.334 23.555 23.826 1.00 55.17 O HETATM 1136 O HOH A2288 21.520 33.937 16.584 1.00 44.59 O HETATM 1137 O HOH A2289 9.845 50.417 17.405 1.00 72.47 O HETATM 1138 O HOH A2290 29.988 15.060 42.813 1.00 70.06 O HETATM 1139 O HOH A2291 31.393 27.699 37.833 1.00 55.85 O HETATM 1140 O HOH A2292 11.199 16.933 27.698 1.00 64.59 O HETATM 1141 O HOH A2293 29.885 17.266 43.644 1.00 56.73 O HETATM 1142 O HOH A2294 18.965 39.992 17.520 1.00 33.67 O HETATM 1143 O HOH A2295 12.651 36.793 17.216 1.00 53.33 O HETATM 1144 O HOH A2296 50.102 8.586 24.559 1.00 47.99 O HETATM 1145 O HOH A2297 7.390 29.671 25.898 1.00 39.20 O HETATM 1146 O HOH A2298 10.102 25.649 16.316 1.00 63.78 O HETATM 1147 O HOH A2299 9.027 38.465 31.716 1.00 54.13 O HETATM 1148 O HOH A2300 6.479 34.086 25.529 1.00 56.69 O HETATM 1149 O HOH A2301 6.730 27.962 22.006 1.00 60.78 O HETATM 1150 O HOH A2302 9.331 23.917 17.796 1.00 63.09 O HETATM 1151 O HOH A2303 5.362 30.595 23.592 1.00 68.21 O HETATM 1152 O HOH A2304 6.358 30.292 20.784 1.00 55.55 O CONECT 945 946 947 CONECT 946 945 CONECT 947 945 948 CONECT 948 947 MASTER 342 0 1 6 0 0 1 6 1138 1 4 11 END