HEADER GENE REGULATION 07-FEB-17 5POQ TITLE PANDDA ANALYSIS GROUP DEPOSITION -- CRYSTAL STRUCTURE OF BRD1 IN TITLE 2 COMPLEX WITH N10974A COMPND MOL_ID: 1; COMPND 2 MOLECULE: BROMODOMAIN-CONTAINING PROTEIN 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BR140-LIKE PROTEIN,BROMODOMAIN AND PHD FINGER-CONTAINING COMPND 5 PROTEIN 2; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BRD1, BRL, BRPF2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PANDDA, SGC - DIAMOND I04-1 FRAGMENT SCREENING, BROMODOMAIN, KEYWDS 2 EPIGENETICS, XCHEMEXPLORER, GENE REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR N.M.PEARCE,T.KROJER,R.TALON,A.R.BRADLEY,M.FAIRHEAD,R.SETHI,N.WRIGHT, AUTHOR 2 E.MACLEAN,P.COLLINS,J.BRANDAO-NETO,A.DOUANGAMATH,Z.RENJIE,A.DIAS, AUTHOR 3 J.NG,P.E.BRENNAN,O.COX,C.BOUNTRA,C.H.ARROWSMITH,A.EDWARDS,F.VON AUTHOR 4 DELFT REVDAT 4 06-MAR-24 5POQ 1 LINK REVDAT 3 04-OCT-17 5POQ 1 REMARK REVDAT 2 27-SEP-17 5POQ 1 JRNL REMARK REVDAT 1 15-MAR-17 5POQ 0 JRNL AUTH N.M.PEARCE,T.KROJER,A.R.BRADLEY,P.COLLINS,R.P.NOWAK,R.TALON, JRNL AUTH 2 B.D.MARSDEN,S.KELM,J.SHI,C.M.DEANE,F.VON DELFT JRNL TITL A MULTI-CRYSTAL METHOD FOR EXTRACTING OBSCURED JRNL TITL 2 CRYSTALLOGRAPHIC STATES FROM CONVENTIONALLY UNINTERPRETABLE JRNL TITL 3 ELECTRON DENSITY. JRNL REF NAT COMMUN V. 8 15123 2017 JRNL REFN ESSN 2041-1723 JRNL PMID 28436492 JRNL DOI 10.1038/NCOMMS15123 REMARK 2 REMARK 2 RESOLUTION. 1.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1682 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.78 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 23279 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.280 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.630 REMARK 3 FREE R VALUE TEST SET COUNT : 1077 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 50.7918 - 3.9396 1.00 2981 158 0.1719 0.2169 REMARK 3 2 3.9396 - 3.1271 0.99 2820 151 0.1940 0.2790 REMARK 3 3 3.1271 - 2.7319 1.00 2822 147 0.2109 0.2741 REMARK 3 4 2.7319 - 2.4821 1.00 2793 124 0.2202 0.2871 REMARK 3 5 2.4821 - 2.3042 1.00 2802 144 0.2335 0.2950 REMARK 3 6 2.3042 - 2.1683 0.86 2399 108 0.3706 0.4933 REMARK 3 7 2.1683 - 2.0598 1.00 2802 122 0.2545 0.3264 REMARK 3 8 2.0598 - 1.9701 1.00 2783 123 0.2548 0.3223 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.350 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.37 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 2149 REMARK 3 ANGLE : 1.318 2914 REMARK 3 CHIRALITY : 0.055 317 REMARK 3 PLANARITY : 0.006 392 REMARK 3 DIHEDRAL : 16.396 880 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5POQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1001400925. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-AUG-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9200 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.3.6 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23361 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.970 REMARK 200 RESOLUTION RANGE LOW (A) : 50.775 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.11400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.75000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 5AMF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS PH 7.0 -- 30% PEG3350, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.28000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.77500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.30500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.77500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.28000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 28.30500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 SER A 8 REMARK 465 SER A 9 REMARK 465 GLY A 10 REMARK 465 VAL A 11 REMARK 465 ASP A 12 REMARK 465 LEU A 13 REMARK 465 GLY A 14 REMARK 465 THR A 15 REMARK 465 GLU A 16 REMARK 465 ASN A 17 REMARK 465 LEU A 18 REMARK 465 TYR A 19 REMARK 465 PHE A 20 REMARK 465 GLN A 21 REMARK 465 LEU A 143 REMARK 465 GLU A 144 REMARK 465 GLU A 145 REMARK 465 ALA A 146 REMARK 465 SER A 147 REMARK 465 GLY A 148 REMARK 465 MET A 149 REMARK 465 HIS A 150 REMARK 465 LEU A 151 REMARK 465 PRO A 152 REMARK 465 GLU A 153 REMARK 465 ARG A 154 REMARK 465 PRO A 155 REMARK 465 ALA A 156 REMARK 465 MET B 1 REMARK 465 HIS B 2 REMARK 465 HIS B 3 REMARK 465 HIS B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 SER B 8 REMARK 465 SER B 9 REMARK 465 GLY B 10 REMARK 465 VAL B 11 REMARK 465 ASP B 12 REMARK 465 LEU B 13 REMARK 465 GLY B 14 REMARK 465 THR B 15 REMARK 465 GLU B 16 REMARK 465 ASN B 17 REMARK 465 LEU B 18 REMARK 465 TYR B 19 REMARK 465 PHE B 20 REMARK 465 GLN B 21 REMARK 465 GLU B 145 REMARK 465 ALA B 146 REMARK 465 SER B 147 REMARK 465 GLY B 148 REMARK 465 MET B 149 REMARK 465 HIS B 150 REMARK 465 LEU B 151 REMARK 465 PRO B 152 REMARK 465 GLU B 153 REMARK 465 ARG B 154 REMARK 465 PRO B 155 REMARK 465 ALA B 156 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 28 CE REMARK 470 LEU A 30 CG CD1 CD2 REMARK 470 ARG A 31 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 37 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 62 CD CE NZ REMARK 470 LYS A 82 CG CD CE NZ REMARK 470 LYS A 90 CG CD CE NZ REMARK 470 ARG A 132 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 141 CG1 CG2 CD1 REMARK 470 LYS B 62 CG CD CE NZ REMARK 470 GLU B 63 CG CD OE1 OE2 REMARK 470 LYS B 90 CG CD CE NZ REMARK 470 ARG B 136 NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 364 O HOH B 444 2.09 REMARK 500 OE2 GLU A 63 O HOH A 301 2.15 REMARK 500 O HOH B 329 O HOH B 438 2.16 REMARK 500 O HOH B 400 O HOH B 445 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 101 CA - CB - CG ANGL. DEV. = 14.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 50 64.90 -117.69 REMARK 500 ASP A 113 33.56 -98.26 REMARK 500 SER A 140 -70.01 -56.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 409 DISTANCE = 6.14 ANGSTROMS REMARK 525 HOH B 449 DISTANCE = 5.88 ANGSTROMS REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 YES CC(N1CCN(CC1)[S+](C)([O-])=O)=O - REMARK 600 6.58 14.98 14.98 CC(N1CCN(CC1)[S+](C)([O-])=O)= REMARK 600 O 4 - HIGH CONFIDENCE REMARK 600 NONE 0.73 REMARK 600 16.697692307692307 0.9108584943447329 REMARK 600 0.94199999999999995 0.071999999999999995 < REMARK 600 RSZD>2.0 0.4509533491137671 < REMARK 600 LABEL>NONE -30.89 4.54 4.54 < REMARK 600 SMILES>CC(N1CCN(CC1)[S+](C)([O-])=O)=O 4 - REMARK 600 HIGH CONFIDENCE NONE REMARK 600 0.63 16.146153846153847 REMARK 600 1.0665341501795933 0.90200000000000002 REMARK 600 0.097000000000000003 1.7 NONE REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 201 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 108 O REMARK 620 2 HOH A 344 O 68.7 REMARK 620 3 MET B 107 O 96.1 162.0 REMARK 620 4 ASN B 110 O 151.9 105.6 83.1 REMARK 620 5 HOH B 353 O 106.1 85.7 108.5 100.7 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8TY A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8TY B 204 DBREF 5POQ A 23 156 UNP O95696 BRD1_HUMAN 555 688 DBREF 5POQ B 23 156 UNP O95696 BRD1_HUMAN 555 688 SEQADV 5POQ MET A 1 UNP O95696 EXPRESSION TAG SEQADV 5POQ HIS A 2 UNP O95696 EXPRESSION TAG SEQADV 5POQ HIS A 3 UNP O95696 EXPRESSION TAG SEQADV 5POQ HIS A 4 UNP O95696 EXPRESSION TAG SEQADV 5POQ HIS A 5 UNP O95696 EXPRESSION TAG SEQADV 5POQ HIS A 6 UNP O95696 EXPRESSION TAG SEQADV 5POQ HIS A 7 UNP O95696 EXPRESSION TAG SEQADV 5POQ SER A 8 UNP O95696 EXPRESSION TAG SEQADV 5POQ SER A 9 UNP O95696 EXPRESSION TAG SEQADV 5POQ GLY A 10 UNP O95696 EXPRESSION TAG SEQADV 5POQ VAL A 11 UNP O95696 EXPRESSION TAG SEQADV 5POQ ASP A 12 UNP O95696 EXPRESSION TAG SEQADV 5POQ LEU A 13 UNP O95696 EXPRESSION TAG SEQADV 5POQ GLY A 14 UNP O95696 EXPRESSION TAG SEQADV 5POQ THR A 15 UNP O95696 EXPRESSION TAG SEQADV 5POQ GLU A 16 UNP O95696 EXPRESSION TAG SEQADV 5POQ ASN A 17 UNP O95696 EXPRESSION TAG SEQADV 5POQ LEU A 18 UNP O95696 EXPRESSION TAG SEQADV 5POQ TYR A 19 UNP O95696 EXPRESSION TAG SEQADV 5POQ PHE A 20 UNP O95696 EXPRESSION TAG SEQADV 5POQ GLN A 21 UNP O95696 EXPRESSION TAG SEQADV 5POQ SER A 22 UNP O95696 EXPRESSION TAG SEQADV 5POQ MET A 23 UNP O95696 VAL 555 ENGINEERED MUTATION SEQADV 5POQ GLU A 34 UNP O95696 PRO 566 ENGINEERED MUTATION SEQADV 5POQ ARG A 37 UNP O95696 VAL 569 ENGINEERED MUTATION SEQADV 5POQ MET B 1 UNP O95696 EXPRESSION TAG SEQADV 5POQ HIS B 2 UNP O95696 EXPRESSION TAG SEQADV 5POQ HIS B 3 UNP O95696 EXPRESSION TAG SEQADV 5POQ HIS B 4 UNP O95696 EXPRESSION TAG SEQADV 5POQ HIS B 5 UNP O95696 EXPRESSION TAG SEQADV 5POQ HIS B 6 UNP O95696 EXPRESSION TAG SEQADV 5POQ HIS B 7 UNP O95696 EXPRESSION TAG SEQADV 5POQ SER B 8 UNP O95696 EXPRESSION TAG SEQADV 5POQ SER B 9 UNP O95696 EXPRESSION TAG SEQADV 5POQ GLY B 10 UNP O95696 EXPRESSION TAG SEQADV 5POQ VAL B 11 UNP O95696 EXPRESSION TAG SEQADV 5POQ ASP B 12 UNP O95696 EXPRESSION TAG SEQADV 5POQ LEU B 13 UNP O95696 EXPRESSION TAG SEQADV 5POQ GLY B 14 UNP O95696 EXPRESSION TAG SEQADV 5POQ THR B 15 UNP O95696 EXPRESSION TAG SEQADV 5POQ GLU B 16 UNP O95696 EXPRESSION TAG SEQADV 5POQ ASN B 17 UNP O95696 EXPRESSION TAG SEQADV 5POQ LEU B 18 UNP O95696 EXPRESSION TAG SEQADV 5POQ TYR B 19 UNP O95696 EXPRESSION TAG SEQADV 5POQ PHE B 20 UNP O95696 EXPRESSION TAG SEQADV 5POQ GLN B 21 UNP O95696 EXPRESSION TAG SEQADV 5POQ SER B 22 UNP O95696 EXPRESSION TAG SEQADV 5POQ MET B 23 UNP O95696 VAL 555 ENGINEERED MUTATION SEQADV 5POQ GLU B 34 UNP O95696 PRO 566 ENGINEERED MUTATION SEQADV 5POQ ARG B 37 UNP O95696 VAL 569 ENGINEERED MUTATION SEQRES 1 A 156 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 156 GLY THR GLU ASN LEU TYR PHE GLN SER MET GLU GLN VAL SEQRES 3 A 156 ALA MET GLU LEU ARG LEU THR GLU LEU THR ARG LEU LEU SEQRES 4 A 156 ARG SER VAL LEU ASP GLN LEU GLN ASP LYS ASP PRO ALA SEQRES 5 A 156 ARG ILE PHE ALA GLN PRO VAL SER LEU LYS GLU VAL PRO SEQRES 6 A 156 ASP TYR LEU ASP HIS ILE LYS HIS PRO MET ASP PHE ALA SEQRES 7 A 156 THR MET ARG LYS ARG LEU GLU ALA GLN GLY TYR LYS ASN SEQRES 8 A 156 LEU HIS GLU PHE GLU GLU ASP PHE ASP LEU ILE ILE ASP SEQRES 9 A 156 ASN CYS MET LYS TYR ASN ALA ARG ASP THR VAL PHE TYR SEQRES 10 A 156 ARG ALA ALA VAL ARG LEU ARG ASP GLN GLY GLY VAL VAL SEQRES 11 A 156 LEU ARG GLN ALA ARG ARG GLU VAL ASP SER ILE GLY LEU SEQRES 12 A 156 GLU GLU ALA SER GLY MET HIS LEU PRO GLU ARG PRO ALA SEQRES 1 B 156 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 156 GLY THR GLU ASN LEU TYR PHE GLN SER MET GLU GLN VAL SEQRES 3 B 156 ALA MET GLU LEU ARG LEU THR GLU LEU THR ARG LEU LEU SEQRES 4 B 156 ARG SER VAL LEU ASP GLN LEU GLN ASP LYS ASP PRO ALA SEQRES 5 B 156 ARG ILE PHE ALA GLN PRO VAL SER LEU LYS GLU VAL PRO SEQRES 6 B 156 ASP TYR LEU ASP HIS ILE LYS HIS PRO MET ASP PHE ALA SEQRES 7 B 156 THR MET ARG LYS ARG LEU GLU ALA GLN GLY TYR LYS ASN SEQRES 8 B 156 LEU HIS GLU PHE GLU GLU ASP PHE ASP LEU ILE ILE ASP SEQRES 9 B 156 ASN CYS MET LYS TYR ASN ALA ARG ASP THR VAL PHE TYR SEQRES 10 B 156 ARG ALA ALA VAL ARG LEU ARG ASP GLN GLY GLY VAL VAL SEQRES 11 B 156 LEU ARG GLN ALA ARG ARG GLU VAL ASP SER ILE GLY LEU SEQRES 12 B 156 GLU GLU ALA SER GLY MET HIS LEU PRO GLU ARG PRO ALA HET EDO A 201 4 HET EDO A 202 4 HET 8TY A 203 13 HET NA B 201 1 HET EDO B 202 4 HET EDO B 203 4 HET 8TY B 204 13 HETNAM EDO 1,2-ETHANEDIOL HETNAM 8TY 1-[4-(METHYLSULFONYL)PIPERAZIN-1-YL]ETHAN-1-ONE HETNAM NA SODIUM ION HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 4(C2 H6 O2) FORMUL 5 8TY 2(C7 H14 N2 O3 S) FORMUL 6 NA NA 1+ FORMUL 10 HOH *258(H2 O) HELIX 1 AA1 SER A 22 LYS A 49 1 28 HELIX 2 AA2 ASP A 66 HIS A 70 5 5 HELIX 3 AA3 ASP A 76 ALA A 86 1 11 HELIX 4 AA4 ASN A 91 ASN A 110 1 20 HELIX 5 AA5 THR A 114 GLY A 142 1 29 HELIX 6 AA6 MET B 23 ASP B 48 1 26 HELIX 7 AA7 ASP B 66 ILE B 71 1 6 HELIX 8 AA8 ASP B 76 ALA B 86 1 11 HELIX 9 AA9 ASN B 91 ASN B 110 1 20 HELIX 10 AB1 THR B 114 GLY B 142 1 29 LINK O LYS A 108 NA NA B 201 1555 1555 2.42 LINK O HOH A 344 NA NA B 201 1555 1555 2.66 LINK O MET B 107 NA NA B 201 1555 1555 2.23 LINK O ASN B 110 NA NA B 201 1555 1555 2.30 LINK NA NA B 201 O HOH B 353 1555 1555 2.27 SITE 1 AC1 5 ASN A 110 PHE A 116 EDO A 202 8TY A 203 SITE 2 AC1 5 MET B 23 SITE 1 AC2 8 ILE A 54 PHE A 55 PHE A 116 EDO A 201 SITE 2 AC2 8 8TY A 203 HOH A 304 HOH A 322 HOH A 347 SITE 1 AC3 11 VAL A 59 GLU A 63 VAL A 64 ASN A 110 SITE 2 AC3 11 PHE A 116 EDO A 201 EDO A 202 HOH A 322 SITE 3 AC3 11 HOH A 359 MET B 23 VAL B 26 SITE 1 AC4 5 LYS A 108 HOH A 344 MET B 107 ASN B 110 SITE 2 AC4 5 HOH B 353 SITE 1 AC5 8 ILE B 54 PHE B 55 VAL B 59 CYS B 106 SITE 2 AC5 8 ASN B 110 PHE B 116 8TY B 204 HOH B 304 SITE 1 AC6 4 GLU B 96 LEU B 131 ARG B 135 HOH B 310 SITE 1 AC7 11 GLU A 63 VAL B 64 CYS B 106 TYR B 109 SITE 2 AC7 11 ASN B 110 PHE B 116 EDO B 202 HOH B 304 SITE 3 AC7 11 HOH B 307 HOH B 339 HOH B 385 CRYST1 56.560 56.610 101.550 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017680 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017665 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009847 0.00000