HEADER HYDROLASE 01-DEC-17 5QD4 TITLE CRYSTAL STRUCTURE OF BACE COMPLEX WITH BMC023 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-SECRETASE 1; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: ASPARTYL PROTEASE 2,ASP 2,BETA-SITE AMYLOID PRECURSOR COMPND 5 PROTEIN CLEAVING ENZYME 1,BETA-SITE APP CLEAVING ENZYME 1,MEMAPSIN-2, COMPND 6 MEMBRANE-ASSOCIATED ASPARTIC PROTEASE 2; COMPND 7 EC: 3.4.23.46; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BACE1, BACE, KIAA1149; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYDROLOASE, D3R, BACE, LIGAND DOCKING, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.M.RONDEAU,C.SHAO,H.YANG,S.K.BURLEY REVDAT 3 10-FEB-21 5QD4 1 JRNL REVDAT 2 30-DEC-20 5QD4 1 AUTHOR REVDAT 1 03-JUN-20 5QD4 0 JRNL AUTH C.D.PARKS,Z.GAIEB,M.CHIU,H.YANG,C.SHAO,W.P.WALTERS, JRNL AUTH 2 J.M.JANSEN,G.MCGAUGHEY,R.A.LEWIS,S.D.BEMBENEK,M.K.AMERIKS, JRNL AUTH 3 T.MIRZADEGAN,S.K.BURLEY,R.E.AMARO,M.K.GILSON JRNL TITL D3R GRAND CHALLENGE 4: BLIND PREDICTION OF PROTEIN-LIGAND JRNL TITL 2 POSES, AFFINITY RANKINGS, AND RELATIVE BINDING FREE JRNL TITL 3 ENERGIES. JRNL REF J.COMPUT.AIDED MOL.DES. V. 34 99 2020 JRNL REFN ESSN 1573-4951 JRNL PMID 31974851 JRNL DOI 10.1007/S10822-020-00289-Y REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.HANESSIAN,G.YANG,J.M.RONDEAU,U.NEUMANN,C.BETSCHART, REMARK 1 AUTH 2 M.TINTELNOT-BLOMLEY REMARK 1 TITL STRUCTURE-BASED DESIGN AND SYNTHESIS OF MACROHETEROCYCLIC REMARK 1 TITL 2 PEPTIDOMIMETIC INHIBITORS OF THE ASPARTIC PROTEASE BETA-SITE REMARK 1 TITL 3 AMYLOID PRECURSOR PROTEIN CLEAVING ENZYME (BACE). REMARK 1 REF J.MED.CHEM. V. 49 4544 2006 REMARK 1 REFN ISSN 0022-2623 REMARK 1 PMID 16854060 REMARK 1 DOI 10.1021/JM060154A REMARK 2 REMARK 2 RESOLUTION. 2.11 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.11 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 56.22 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 93652 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 4701 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 56.2388 - 6.5593 0.95 2933 154 0.1780 0.1964 REMARK 3 2 6.5593 - 5.2075 1.00 3017 179 0.1715 0.1905 REMARK 3 3 5.2075 - 4.5496 0.96 2883 150 0.1364 0.1570 REMARK 3 4 4.5496 - 4.1338 0.98 2940 163 0.1381 0.1691 REMARK 3 5 4.1338 - 3.8375 1.00 3028 148 0.1461 0.1908 REMARK 3 6 3.8375 - 3.6113 1.00 2989 149 0.1597 0.1820 REMARK 3 7 3.6113 - 3.4305 1.00 3041 139 0.1663 0.2207 REMARK 3 8 3.4305 - 3.2812 1.00 2964 165 0.1868 0.2240 REMARK 3 9 3.2812 - 3.1549 1.00 3033 130 0.1951 0.2119 REMARK 3 10 3.1549 - 3.0460 1.00 3012 156 0.1841 0.2432 REMARK 3 11 3.0460 - 2.9508 1.00 2992 151 0.1823 0.2195 REMARK 3 12 2.9508 - 2.8664 1.00 3003 177 0.1845 0.2095 REMARK 3 13 2.8664 - 2.7910 1.00 3000 162 0.1866 0.2189 REMARK 3 14 2.7910 - 2.7229 1.00 2967 162 0.1895 0.2253 REMARK 3 15 2.7229 - 2.6610 1.00 2962 185 0.1859 0.2507 REMARK 3 16 2.6610 - 2.6044 1.00 2997 174 0.1811 0.2604 REMARK 3 17 2.6044 - 2.5523 1.00 2952 191 0.1738 0.1972 REMARK 3 18 2.5523 - 2.5041 1.00 2978 160 0.1713 0.1874 REMARK 3 19 2.5041 - 2.4594 1.00 2968 167 0.1705 0.2273 REMARK 3 20 2.4594 - 2.4177 1.00 3004 152 0.1783 0.1987 REMARK 3 21 2.4177 - 2.3787 1.00 3027 160 0.1851 0.2338 REMARK 3 22 2.3787 - 2.3421 1.00 2952 162 0.1781 0.2331 REMARK 3 23 2.3421 - 2.3077 1.00 2986 153 0.1770 0.2377 REMARK 3 24 2.3077 - 2.2751 1.00 3017 135 0.1788 0.2095 REMARK 3 25 2.2751 - 2.2444 1.00 2966 162 0.1750 0.2176 REMARK 3 26 2.2444 - 2.2152 1.00 2992 162 0.1807 0.2245 REMARK 3 27 2.2152 - 2.1876 1.00 3020 132 0.1883 0.2335 REMARK 3 28 2.1876 - 2.1612 1.00 2975 144 0.1916 0.2122 REMARK 3 29 2.1612 - 2.1361 1.00 3029 152 0.1988 0.2516 REMARK 3 30 2.1361 - 2.1121 0.79 2324 125 0.2182 0.2682 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.610 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 9296 REMARK 3 ANGLE : 0.792 12637 REMARK 3 CHIRALITY : 0.056 1374 REMARK 3 PLANARITY : 0.005 1623 REMARK 3 DIHEDRAL : 15.046 5409 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -2 THROUGH 183 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.4564 10.0407 16.5205 REMARK 3 T TENSOR REMARK 3 T11: 0.4732 T22: 0.4340 REMARK 3 T33: 0.3729 T12: -0.1080 REMARK 3 T13: -0.0345 T23: 0.0972 REMARK 3 L TENSOR REMARK 3 L11: 2.2223 L22: 3.9529 REMARK 3 L33: 2.3467 L12: -0.8253 REMARK 3 L13: 0.5776 L23: -0.6104 REMARK 3 S TENSOR REMARK 3 S11: -0.1433 S12: 0.3399 S13: 0.5172 REMARK 3 S21: -0.0070 S22: -0.0435 S23: -0.2957 REMARK 3 S31: -0.4583 S32: 0.2507 S33: 0.1362 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 184 THROUGH 267 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.6158 -8.5529 20.4270 REMARK 3 T TENSOR REMARK 3 T11: 0.3612 T22: 0.3540 REMARK 3 T33: 0.4560 T12: 0.0564 REMARK 3 T13: -0.0238 T23: 0.0492 REMARK 3 L TENSOR REMARK 3 L11: 1.7881 L22: 2.5057 REMARK 3 L33: 1.9593 L12: -0.0074 REMARK 3 L13: -0.2492 L23: 0.0585 REMARK 3 S TENSOR REMARK 3 S11: -0.0956 S12: 0.2754 S13: -0.0211 REMARK 3 S21: -0.0193 S22: 0.1603 S23: 0.7345 REMARK 3 S31: -0.1238 S32: -0.3032 S33: -0.0454 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 268 THROUGH 340 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.6324 -3.6306 29.2959 REMARK 3 T TENSOR REMARK 3 T11: 0.5173 T22: 0.3285 REMARK 3 T33: 0.4622 T12: 0.0953 REMARK 3 T13: 0.0835 T23: 0.0260 REMARK 3 L TENSOR REMARK 3 L11: 2.0385 L22: 1.2469 REMARK 3 L33: 2.0002 L12: -0.0696 REMARK 3 L13: -0.0521 L23: -0.1696 REMARK 3 S TENSOR REMARK 3 S11: -0.1076 S12: -0.0370 S13: 0.3326 REMARK 3 S21: 0.4048 S22: 0.0983 S23: 0.5039 REMARK 3 S31: -0.5572 S32: -0.1800 S33: 0.0384 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 341 THROUGH 385 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.6419 -13.0618 25.0607 REMARK 3 T TENSOR REMARK 3 T11: 0.3528 T22: 0.3182 REMARK 3 T33: 0.2594 T12: 0.0423 REMARK 3 T13: 0.0181 T23: -0.0008 REMARK 3 L TENSOR REMARK 3 L11: 2.3794 L22: 2.6944 REMARK 3 L33: 0.9519 L12: 0.3465 REMARK 3 L13: 0.3057 L23: -0.9830 REMARK 3 S TENSOR REMARK 3 S11: -0.0806 S12: 0.1104 S13: -0.1757 REMARK 3 S21: -0.0441 S22: 0.1034 S23: 0.3204 REMARK 3 S31: -0.1585 S32: -0.1453 S33: -0.0420 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -2 THROUGH 233 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.5918 13.6347 -13.4408 REMARK 3 T TENSOR REMARK 3 T11: 0.2628 T22: 0.3321 REMARK 3 T33: 0.3143 T12: 0.0172 REMARK 3 T13: -0.0258 T23: 0.0619 REMARK 3 L TENSOR REMARK 3 L11: 3.8319 L22: 1.7468 REMARK 3 L33: 2.2689 L12: 0.9877 REMARK 3 L13: 0.2275 L23: 0.0977 REMARK 3 S TENSOR REMARK 3 S11: 0.0518 S12: -0.2289 S13: -0.5246 REMARK 3 S21: 0.1459 S22: -0.0114 S23: 0.0443 REMARK 3 S31: 0.0436 S32: -0.4748 S33: -0.0118 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 234 THROUGH 340 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.2023 -1.0043 -23.5506 REMARK 3 T TENSOR REMARK 3 T11: 0.6465 T22: 0.3265 REMARK 3 T33: 1.0907 T12: -0.0047 REMARK 3 T13: 0.0740 T23: -0.1459 REMARK 3 L TENSOR REMARK 3 L11: 0.8553 L22: 1.2214 REMARK 3 L33: 1.9069 L12: -0.1584 REMARK 3 L13: 0.2174 L23: 0.1076 REMARK 3 S TENSOR REMARK 3 S11: -0.0338 S12: 0.3244 S13: -1.3077 REMARK 3 S21: -0.0994 S22: -0.0505 S23: -0.5196 REMARK 3 S31: 0.8869 S32: 0.0340 S33: 0.0049 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 341 THROUGH 385 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.8213 15.8087 -20.0482 REMARK 3 T TENSOR REMARK 3 T11: 0.2983 T22: 0.3034 REMARK 3 T33: 0.4048 T12: 0.0075 REMARK 3 T13: -0.0133 T23: 0.0231 REMARK 3 L TENSOR REMARK 3 L11: 3.2205 L22: 0.9538 REMARK 3 L33: 2.8304 L12: 0.3227 REMARK 3 L13: -1.0823 L23: 0.8734 REMARK 3 S TENSOR REMARK 3 S11: -0.0511 S12: 0.2040 S13: -0.5985 REMARK 3 S21: -0.0972 S22: -0.0111 S23: -0.2086 REMARK 3 S31: 0.1106 S32: 0.3079 S33: -0.0836 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID -2 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.2418 -48.2529 36.7675 REMARK 3 T TENSOR REMARK 3 T11: 0.3228 T22: 0.5147 REMARK 3 T33: 0.4269 T12: -0.0169 REMARK 3 T13: -0.0176 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 2.8295 L22: 1.1102 REMARK 3 L33: 3.8362 L12: 0.6783 REMARK 3 L13: -0.9614 L23: -1.9766 REMARK 3 S TENSOR REMARK 3 S11: -0.0855 S12: 0.2534 S13: 0.0099 REMARK 3 S21: 0.1207 S22: -0.0689 S23: 0.1243 REMARK 3 S31: 0.1618 S32: -1.1118 S33: 0.2635 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 25 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.0209 -55.1691 50.8201 REMARK 3 T TENSOR REMARK 3 T11: 0.5161 T22: 0.4688 REMARK 3 T33: 0.4601 T12: -0.0813 REMARK 3 T13: 0.0455 T23: 0.0780 REMARK 3 L TENSOR REMARK 3 L11: 1.6935 L22: 1.0226 REMARK 3 L33: 2.5368 L12: -0.2208 REMARK 3 L13: 0.1907 L23: 0.3015 REMARK 3 S TENSOR REMARK 3 S11: -0.0698 S12: -0.2064 S13: -0.1629 REMARK 3 S21: 0.3565 S22: 0.0074 S23: 0.2924 REMARK 3 S31: 0.4158 S32: -0.5286 S33: 0.0664 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 75 THROUGH 176 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.5745 -52.3051 42.5746 REMARK 3 T TENSOR REMARK 3 T11: 0.3073 T22: 0.2958 REMARK 3 T33: 0.3674 T12: -0.0114 REMARK 3 T13: -0.0314 T23: 0.0390 REMARK 3 L TENSOR REMARK 3 L11: 2.1607 L22: 1.9225 REMARK 3 L33: 3.9540 L12: 0.1686 REMARK 3 L13: -0.7125 L23: 0.1254 REMARK 3 S TENSOR REMARK 3 S11: -0.0440 S12: -0.0316 S13: -0.2016 REMARK 3 S21: 0.0796 S22: -0.0118 S23: 0.0152 REMARK 3 S31: 0.4573 S32: -0.4077 S33: 0.0590 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 177 THROUGH 252 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.5437 -33.0127 39.7809 REMARK 3 T TENSOR REMARK 3 T11: 0.3001 T22: 0.3358 REMARK 3 T33: 0.3619 T12: 0.0270 REMARK 3 T13: -0.0060 T23: 0.0107 REMARK 3 L TENSOR REMARK 3 L11: 2.3986 L22: 2.0597 REMARK 3 L33: 1.6978 L12: 0.2938 REMARK 3 L13: -0.6288 L23: -0.3590 REMARK 3 S TENSOR REMARK 3 S11: 0.1936 S12: -0.2928 S13: 0.1699 REMARK 3 S21: 0.2209 S22: -0.0735 S23: -0.2025 REMARK 3 S31: -0.2171 S32: 0.0994 S33: -0.1267 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 253 THROUGH 340 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.7020 -24.3979 42.0612 REMARK 3 T TENSOR REMARK 3 T11: 0.4171 T22: 0.4261 REMARK 3 T33: 0.4325 T12: 0.0996 REMARK 3 T13: 0.1145 T23: 0.0124 REMARK 3 L TENSOR REMARK 3 L11: 1.5427 L22: 2.2573 REMARK 3 L33: 2.0795 L12: 0.2197 REMARK 3 L13: 0.3540 L23: -0.5919 REMARK 3 S TENSOR REMARK 3 S11: 0.1334 S12: -0.1636 S13: 0.2953 REMARK 3 S21: 0.4828 S22: 0.0503 S23: 0.3163 REMARK 3 S31: -0.4038 S32: -0.4755 S33: -0.1295 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 341 THROUGH 385 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.6601 -34.8492 31.5322 REMARK 3 T TENSOR REMARK 3 T11: 0.3247 T22: 0.3442 REMARK 3 T33: 0.3956 T12: 0.0751 REMARK 3 T13: 0.0072 T23: 0.0448 REMARK 3 L TENSOR REMARK 3 L11: 1.2239 L22: 1.9940 REMARK 3 L33: 2.3240 L12: 1.3078 REMARK 3 L13: -0.8839 L23: -0.0147 REMARK 3 S TENSOR REMARK 3 S11: 0.0179 S12: -0.0788 S13: 0.0964 REMARK 3 S21: 0.0155 S22: 0.0374 S23: -0.0539 REMARK 3 S31: -0.1622 S32: -0.0151 S33: -0.0295 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5QD4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1001401797. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-DEC-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9784 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 93651 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.112 REMARK 200 RESOLUTION RANGE LOW (A) : 56.219 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS WERE GROWN AT 19C BY VAPOUR REMARK 280 DIFFUSION IN HANGING DROPS FROM 1.0M AMMONIUM PHOSPHATE, 0.1M REMARK 280 SODIUM CITRATE PH 5.0. PROTEIN STOCK WAS BACE MUT46B BATCH XII REMARK 280 8.45MG/ML IN 10MM TRIS-HCL PH 7.4, 25MM NACL, WITH A 2.5-FOLD REMARK 280 EXCESS OF BMC023 ADDED FROM A 25MM STOCK SOLUTION IN DMSO (2% REMARK 280 DMSO IN DROP). CRYO-PROTECTANT WAS 1.2M AMMONIUM PHOSPHATE, 0.1M REMARK 280 SODIUM CITRATE PH 5.0, 25% GLYCEROL, 0.5MM BMC023, 2% DMSO., REMARK 280 TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 51.89050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -15 REMARK 465 PRO A -14 REMARK 465 ASP A -13 REMARK 465 GLU A -12 REMARK 465 GLU A -11 REMARK 465 PRO A -10 REMARK 465 GLU A -9 REMARK 465 GLU A -8 REMARK 465 PRO A -7 REMARK 465 GLY A -6 REMARK 465 ARG A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 GLY A 158 REMARK 465 PHE A 159 REMARK 465 PRO A 160 REMARK 465 LEU A 161 REMARK 465 ASN A 162 REMARK 465 GLN A 163 REMARK 465 SER A 164 REMARK 465 GLU A 165 REMARK 465 VAL A 166 REMARK 465 LEU A 167 REMARK 465 ALA A 168 REMARK 465 ILE A 386 REMARK 465 GLY B -15 REMARK 465 PRO B -14 REMARK 465 ASP B -13 REMARK 465 GLU B -12 REMARK 465 GLU B -11 REMARK 465 PRO B -10 REMARK 465 GLU B -9 REMARK 465 GLU B -8 REMARK 465 PRO B -7 REMARK 465 GLY B -6 REMARK 465 ARG B -5 REMARK 465 ARG B -4 REMARK 465 GLY B -3 REMARK 465 GLY B 158 REMARK 465 PHE B 159 REMARK 465 PRO B 160 REMARK 465 LEU B 161 REMARK 465 ASN B 162 REMARK 465 GLN B 163 REMARK 465 SER B 164 REMARK 465 GLU B 165 REMARK 465 VAL B 166 REMARK 465 LEU B 167 REMARK 465 ALA B 168 REMARK 465 ILE B 386 REMARK 465 GLY C -15 REMARK 465 PRO C -14 REMARK 465 ASP C -13 REMARK 465 GLU C -12 REMARK 465 GLU C -11 REMARK 465 PRO C -10 REMARK 465 GLU C -9 REMARK 465 GLU C -8 REMARK 465 PRO C -7 REMARK 465 GLY C -6 REMARK 465 ARG C -5 REMARK 465 ARG C -4 REMARK 465 GLY C -3 REMARK 465 LEU C 161 REMARK 465 ASN C 162 REMARK 465 GLN C 163 REMARK 465 SER C 164 REMARK 465 GLU C 165 REMARK 465 VAL C 166 REMARK 465 LEU C 167 REMARK 465 ILE C 386 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 89 44.05 -109.35 REMARK 500 TRP A 197 -86.11 -138.60 REMARK 500 GLU A 265 -77.68 -79.50 REMARK 500 ALA A 313 -161.20 -117.33 REMARK 500 THR A 314 30.10 -97.99 REMARK 500 GLN A 316 59.52 -114.31 REMARK 500 CYS A 359 55.75 -97.91 REMARK 500 HIS B 89 43.85 -105.14 REMARK 500 TRP B 197 -86.72 -141.61 REMARK 500 GLU B 265 -70.64 -75.38 REMARK 500 ALA B 313 -165.46 -117.86 REMARK 500 THR B 314 35.88 -90.56 REMARK 500 CYS B 359 66.97 -101.45 REMARK 500 ASP B 363 -114.00 -97.25 REMARK 500 HIS C 89 42.15 -106.39 REMARK 500 TRP C 197 -87.35 -140.50 REMARK 500 ARG C 205 147.03 -171.03 REMARK 500 LYS C 214 43.67 71.68 REMARK 500 GLU C 265 -76.53 -82.34 REMARK 500 ALA C 313 -166.94 -120.25 REMARK 500 CYS C 359 69.44 -109.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 AXQ A 401 REMARK 615 AXQ B 401 REMARK 615 AXQ C 401 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AXQ A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AXQ B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AXQ C 401 DBREF 5QD4 A -13 386 UNP P56817 BACE1_HUMAN 48 447 DBREF 5QD4 B -13 386 UNP P56817 BACE1_HUMAN 48 447 DBREF 5QD4 C -13 386 UNP P56817 BACE1_HUMAN 48 447 SEQADV 5QD4 GLY A -15 UNP P56817 EXPRESSION TAG SEQADV 5QD4 PRO A -14 UNP P56817 EXPRESSION TAG SEQADV 5QD4 GLY B -15 UNP P56817 EXPRESSION TAG SEQADV 5QD4 PRO B -14 UNP P56817 EXPRESSION TAG SEQADV 5QD4 GLY C -15 UNP P56817 EXPRESSION TAG SEQADV 5QD4 PRO C -14 UNP P56817 EXPRESSION TAG SEQRES 1 A 402 GLY PRO ASP GLU GLU PRO GLU GLU PRO GLY ARG ARG GLY SEQRES 2 A 402 SER PHE VAL GLU MET VAL ASP ASN LEU ARG GLY LYS SER SEQRES 3 A 402 GLY GLN GLY TYR TYR VAL GLU MET THR VAL GLY SER PRO SEQRES 4 A 402 PRO GLN THR LEU ASN ILE LEU VAL ASP THR GLY SER SER SEQRES 5 A 402 ASN PHE ALA VAL GLY ALA ALA PRO HIS PRO PHE LEU HIS SEQRES 6 A 402 ARG TYR TYR GLN ARG GLN LEU SER SER THR TYR ARG ASP SEQRES 7 A 402 LEU ARG LYS GLY VAL TYR VAL PRO TYR THR GLN GLY LYS SEQRES 8 A 402 TRP GLU GLY GLU LEU GLY THR ASP LEU VAL SER ILE PRO SEQRES 9 A 402 HIS GLY PRO ASN VAL THR VAL ARG ALA ASN ILE ALA ALA SEQRES 10 A 402 ILE THR GLU SER ASP LYS PHE PHE ILE ASN GLY SER ASN SEQRES 11 A 402 TRP GLU GLY ILE LEU GLY LEU ALA TYR ALA GLU ILE ALA SEQRES 12 A 402 ARG PRO ASP ASP SER LEU GLU PRO PHE PHE ASP SER LEU SEQRES 13 A 402 VAL LYS GLN THR HIS VAL PRO ASN LEU PHE SER LEU GLN SEQRES 14 A 402 LEU CYS GLY ALA GLY PHE PRO LEU ASN GLN SER GLU VAL SEQRES 15 A 402 LEU ALA SER VAL GLY GLY SER MET ILE ILE GLY GLY ILE SEQRES 16 A 402 ASP HIS SER LEU TYR THR GLY SER LEU TRP TYR THR PRO SEQRES 17 A 402 ILE ARG ARG GLU TRP TYR TYR GLU VAL ILE ILE VAL ARG SEQRES 18 A 402 VAL GLU ILE ASN GLY GLN ASP LEU LYS MET ASP CYS LYS SEQRES 19 A 402 GLU TYR ASN TYR ASP LYS SER ILE VAL ASP SER GLY THR SEQRES 20 A 402 THR ASN LEU ARG LEU PRO LYS LYS VAL PHE GLU ALA ALA SEQRES 21 A 402 VAL LYS SER ILE LYS ALA ALA SER SER THR GLU LYS PHE SEQRES 22 A 402 PRO ASP GLY PHE TRP LEU GLY GLU GLN LEU VAL CYS TRP SEQRES 23 A 402 GLN ALA GLY THR THR PRO TRP ASN ILE PHE PRO VAL ILE SEQRES 24 A 402 SER LEU TYR LEU MET GLY GLU VAL THR ASN GLN SER PHE SEQRES 25 A 402 ARG ILE THR ILE LEU PRO GLN GLN TYR LEU ARG PRO VAL SEQRES 26 A 402 GLU ASP VAL ALA THR SER GLN ASP ASP CYS TYR LYS PHE SEQRES 27 A 402 ALA ILE SER GLN SER SER THR GLY THR VAL MET GLY ALA SEQRES 28 A 402 VAL ILE MET GLU GLY PHE TYR VAL VAL PHE ASP ARG ALA SEQRES 29 A 402 ARG LYS ARG ILE GLY PHE ALA VAL SER ALA CYS HIS VAL SEQRES 30 A 402 HIS ASP GLU PHE ARG THR ALA ALA VAL GLU GLY PRO PHE SEQRES 31 A 402 VAL THR LEU ASP MET GLU ASP CYS GLY TYR ASN ILE SEQRES 1 B 402 GLY PRO ASP GLU GLU PRO GLU GLU PRO GLY ARG ARG GLY SEQRES 2 B 402 SER PHE VAL GLU MET VAL ASP ASN LEU ARG GLY LYS SER SEQRES 3 B 402 GLY GLN GLY TYR TYR VAL GLU MET THR VAL GLY SER PRO SEQRES 4 B 402 PRO GLN THR LEU ASN ILE LEU VAL ASP THR GLY SER SER SEQRES 5 B 402 ASN PHE ALA VAL GLY ALA ALA PRO HIS PRO PHE LEU HIS SEQRES 6 B 402 ARG TYR TYR GLN ARG GLN LEU SER SER THR TYR ARG ASP SEQRES 7 B 402 LEU ARG LYS GLY VAL TYR VAL PRO TYR THR GLN GLY LYS SEQRES 8 B 402 TRP GLU GLY GLU LEU GLY THR ASP LEU VAL SER ILE PRO SEQRES 9 B 402 HIS GLY PRO ASN VAL THR VAL ARG ALA ASN ILE ALA ALA SEQRES 10 B 402 ILE THR GLU SER ASP LYS PHE PHE ILE ASN GLY SER ASN SEQRES 11 B 402 TRP GLU GLY ILE LEU GLY LEU ALA TYR ALA GLU ILE ALA SEQRES 12 B 402 ARG PRO ASP ASP SER LEU GLU PRO PHE PHE ASP SER LEU SEQRES 13 B 402 VAL LYS GLN THR HIS VAL PRO ASN LEU PHE SER LEU GLN SEQRES 14 B 402 LEU CYS GLY ALA GLY PHE PRO LEU ASN GLN SER GLU VAL SEQRES 15 B 402 LEU ALA SER VAL GLY GLY SER MET ILE ILE GLY GLY ILE SEQRES 16 B 402 ASP HIS SER LEU TYR THR GLY SER LEU TRP TYR THR PRO SEQRES 17 B 402 ILE ARG ARG GLU TRP TYR TYR GLU VAL ILE ILE VAL ARG SEQRES 18 B 402 VAL GLU ILE ASN GLY GLN ASP LEU LYS MET ASP CYS LYS SEQRES 19 B 402 GLU TYR ASN TYR ASP LYS SER ILE VAL ASP SER GLY THR SEQRES 20 B 402 THR ASN LEU ARG LEU PRO LYS LYS VAL PHE GLU ALA ALA SEQRES 21 B 402 VAL LYS SER ILE LYS ALA ALA SER SER THR GLU LYS PHE SEQRES 22 B 402 PRO ASP GLY PHE TRP LEU GLY GLU GLN LEU VAL CYS TRP SEQRES 23 B 402 GLN ALA GLY THR THR PRO TRP ASN ILE PHE PRO VAL ILE SEQRES 24 B 402 SER LEU TYR LEU MET GLY GLU VAL THR ASN GLN SER PHE SEQRES 25 B 402 ARG ILE THR ILE LEU PRO GLN GLN TYR LEU ARG PRO VAL SEQRES 26 B 402 GLU ASP VAL ALA THR SER GLN ASP ASP CYS TYR LYS PHE SEQRES 27 B 402 ALA ILE SER GLN SER SER THR GLY THR VAL MET GLY ALA SEQRES 28 B 402 VAL ILE MET GLU GLY PHE TYR VAL VAL PHE ASP ARG ALA SEQRES 29 B 402 ARG LYS ARG ILE GLY PHE ALA VAL SER ALA CYS HIS VAL SEQRES 30 B 402 HIS ASP GLU PHE ARG THR ALA ALA VAL GLU GLY PRO PHE SEQRES 31 B 402 VAL THR LEU ASP MET GLU ASP CYS GLY TYR ASN ILE SEQRES 1 C 402 GLY PRO ASP GLU GLU PRO GLU GLU PRO GLY ARG ARG GLY SEQRES 2 C 402 SER PHE VAL GLU MET VAL ASP ASN LEU ARG GLY LYS SER SEQRES 3 C 402 GLY GLN GLY TYR TYR VAL GLU MET THR VAL GLY SER PRO SEQRES 4 C 402 PRO GLN THR LEU ASN ILE LEU VAL ASP THR GLY SER SER SEQRES 5 C 402 ASN PHE ALA VAL GLY ALA ALA PRO HIS PRO PHE LEU HIS SEQRES 6 C 402 ARG TYR TYR GLN ARG GLN LEU SER SER THR TYR ARG ASP SEQRES 7 C 402 LEU ARG LYS GLY VAL TYR VAL PRO TYR THR GLN GLY LYS SEQRES 8 C 402 TRP GLU GLY GLU LEU GLY THR ASP LEU VAL SER ILE PRO SEQRES 9 C 402 HIS GLY PRO ASN VAL THR VAL ARG ALA ASN ILE ALA ALA SEQRES 10 C 402 ILE THR GLU SER ASP LYS PHE PHE ILE ASN GLY SER ASN SEQRES 11 C 402 TRP GLU GLY ILE LEU GLY LEU ALA TYR ALA GLU ILE ALA SEQRES 12 C 402 ARG PRO ASP ASP SER LEU GLU PRO PHE PHE ASP SER LEU SEQRES 13 C 402 VAL LYS GLN THR HIS VAL PRO ASN LEU PHE SER LEU GLN SEQRES 14 C 402 LEU CYS GLY ALA GLY PHE PRO LEU ASN GLN SER GLU VAL SEQRES 15 C 402 LEU ALA SER VAL GLY GLY SER MET ILE ILE GLY GLY ILE SEQRES 16 C 402 ASP HIS SER LEU TYR THR GLY SER LEU TRP TYR THR PRO SEQRES 17 C 402 ILE ARG ARG GLU TRP TYR TYR GLU VAL ILE ILE VAL ARG SEQRES 18 C 402 VAL GLU ILE ASN GLY GLN ASP LEU LYS MET ASP CYS LYS SEQRES 19 C 402 GLU TYR ASN TYR ASP LYS SER ILE VAL ASP SER GLY THR SEQRES 20 C 402 THR ASN LEU ARG LEU PRO LYS LYS VAL PHE GLU ALA ALA SEQRES 21 C 402 VAL LYS SER ILE LYS ALA ALA SER SER THR GLU LYS PHE SEQRES 22 C 402 PRO ASP GLY PHE TRP LEU GLY GLU GLN LEU VAL CYS TRP SEQRES 23 C 402 GLN ALA GLY THR THR PRO TRP ASN ILE PHE PRO VAL ILE SEQRES 24 C 402 SER LEU TYR LEU MET GLY GLU VAL THR ASN GLN SER PHE SEQRES 25 C 402 ARG ILE THR ILE LEU PRO GLN GLN TYR LEU ARG PRO VAL SEQRES 26 C 402 GLU ASP VAL ALA THR SER GLN ASP ASP CYS TYR LYS PHE SEQRES 27 C 402 ALA ILE SER GLN SER SER THR GLY THR VAL MET GLY ALA SEQRES 28 C 402 VAL ILE MET GLU GLY PHE TYR VAL VAL PHE ASP ARG ALA SEQRES 29 C 402 ARG LYS ARG ILE GLY PHE ALA VAL SER ALA CYS HIS VAL SEQRES 30 C 402 HIS ASP GLU PHE ARG THR ALA ALA VAL GLU GLY PRO PHE SEQRES 31 C 402 VAL THR LEU ASP MET GLU ASP CYS GLY TYR ASN ILE HET AXQ A 401 45 HET AXQ B 401 45 HET AXQ C 401 45 HETNAM AXQ {(E)-(3R,6S,9R)-3-[(1S,3R)-3-((S)-1 -BUTYLCARBAMOYL-2- HETNAM 2 AXQ METHYL-PROPYLCARB AMOYL)-1-HYDROXY-BUTYL]-6-METHYL-5, HETNAM 3 AXQ 8-DIOXO-1,11-DITHIA-4,7-DIAZA-CYCLO PENTADEC-13-EN-9- HETNAM 4 AXQ YL}-CARBAMIC ACID TERT-BUTYL ESTER FORMUL 4 AXQ 3(C31 H55 N5 O7 S2) FORMUL 7 HOH *219(H2 O) HELIX 1 AA1 SER A -2 VAL A 3 5 6 HELIX 2 AA2 GLN A 53 SER A 57 5 5 HELIX 3 AA3 TYR A 123 ALA A 127 5 5 HELIX 4 AA4 PRO A 135 THR A 144 1 10 HELIX 5 AA5 ASP A 180 SER A 182 5 3 HELIX 6 AA6 ASP A 216 TYR A 222 5 7 HELIX 7 AA7 LYS A 238 SER A 252 1 15 HELIX 8 AA8 GLY A 260 GLY A 264 5 5 HELIX 9 AA9 PRO A 276 PHE A 280 5 5 HELIX 10 AB1 LEU A 301 TYR A 305 1 5 HELIX 11 AB2 GLY A 334 GLU A 339 1 6 HELIX 12 AB3 ARG A 347 ARG A 349 5 3 HELIX 13 AB4 ASP A 378 GLY A 383 5 6 HELIX 14 AB5 SER B -2 VAL B 3 5 6 HELIX 15 AB6 GLN B 53 SER B 57 5 5 HELIX 16 AB7 TYR B 123 ALA B 127 5 5 HELIX 17 AB8 PRO B 135 THR B 144 1 10 HELIX 18 AB9 ASP B 180 SER B 182 5 3 HELIX 19 AC1 ASP B 216 TYR B 222 5 7 HELIX 20 AC2 LYS B 238 SER B 252 1 15 HELIX 21 AC3 PRO B 276 PHE B 280 5 5 HELIX 22 AC4 LEU B 301 TYR B 305 1 5 HELIX 23 AC5 GLY B 334 GLU B 339 1 6 HELIX 24 AC6 ARG B 347 ARG B 349 5 3 HELIX 25 AC7 ASP B 378 GLY B 383 5 6 HELIX 26 AC8 SER C -2 VAL C 3 5 6 HELIX 27 AC9 GLN C 53 SER C 57 5 5 HELIX 28 AD1 TYR C 123 ALA C 127 5 5 HELIX 29 AD2 PRO C 135 THR C 144 1 10 HELIX 30 AD3 ASP C 180 SER C 182 5 3 HELIX 31 AD4 ASP C 216 TYR C 222 5 7 HELIX 32 AD5 LYS C 238 SER C 252 1 15 HELIX 33 AD6 PRO C 258 LEU C 263 1 6 HELIX 34 AD7 PRO C 276 PHE C 280 5 5 HELIX 35 AD8 LEU C 301 TYR C 305 1 5 HELIX 36 AD9 GLY C 334 GLU C 339 1 6 HELIX 37 AE1 ARG C 347 ARG C 349 5 3 HELIX 38 AE2 ASP C 378 GLY C 383 1 6 SHEET 1 AA1 9 ARG A 61 PRO A 70 0 SHEET 2 AA1 9 LYS A 75 SER A 86 -1 O TRP A 76 N VAL A 69 SHEET 3 AA1 9 TYR A 14 VAL A 20 -1 N THR A 19 O SER A 86 SHEET 4 AA1 9 LEU A 6 GLY A 8 -1 N ARG A 7 O TYR A 15 SHEET 5 AA1 9 VAL A 170 ILE A 176 -1 O GLY A 172 N LEU A 6 SHEET 6 AA1 9 PHE A 150 CYS A 155 -1 N GLN A 153 O SER A 173 SHEET 7 AA1 9 PHE A 341 ASP A 346 -1 O PHE A 345 N PHE A 150 SHEET 8 AA1 9 ARG A 351 SER A 357 -1 O ALA A 355 N TYR A 342 SHEET 9 AA1 9 TYR A 184 PRO A 192 -1 N THR A 191 O ILE A 352 SHEET 1 AA213 ARG A 61 PRO A 70 0 SHEET 2 AA213 LYS A 75 SER A 86 -1 O TRP A 76 N VAL A 69 SHEET 3 AA213 THR A 94 ASP A 106 -1 O ALA A 101 N GLU A 79 SHEET 4 AA213 PHE A 38 GLY A 41 1 N VAL A 40 O ILE A 102 SHEET 5 AA213 GLY A 117 GLY A 120 -1 O ILE A 118 N ALA A 39 SHEET 6 AA213 GLN A 25 ASP A 32 1 N LEU A 30 O LEU A 119 SHEET 7 AA213 TYR A 14 VAL A 20 -1 N VAL A 16 O ILE A 29 SHEET 8 AA213 LEU A 6 GLY A 8 -1 N ARG A 7 O TYR A 15 SHEET 9 AA213 VAL A 170 ILE A 176 -1 O GLY A 172 N LEU A 6 SHEET 10 AA213 PHE A 150 CYS A 155 -1 N GLN A 153 O SER A 173 SHEET 11 AA213 PHE A 341 ASP A 346 -1 O PHE A 345 N PHE A 150 SHEET 12 AA213 ARG A 351 SER A 357 -1 O ALA A 355 N TYR A 342 SHEET 13 AA213 TYR A 184 PRO A 192 -1 N THR A 191 O ILE A 352 SHEET 1 AA3 5 GLN A 211 ASP A 212 0 SHEET 2 AA3 5 ILE A 203 ILE A 208 -1 N ILE A 208 O GLN A 211 SHEET 3 AA3 5 ILE A 283 MET A 288 -1 O SER A 284 N GLU A 207 SHEET 4 AA3 5 GLN A 294 ILE A 300 -1 O ILE A 300 N ILE A 283 SHEET 5 AA3 5 ALA A 369 VAL A 375 -1 O GLU A 371 N ARG A 297 SHEET 1 AA4 4 SER A 225 VAL A 227 0 SHEET 2 AA4 4 THR A 331 MET A 333 1 O MET A 333 N ILE A 226 SHEET 3 AA4 4 LEU A 234 PRO A 237 -1 N ARG A 235 O VAL A 332 SHEET 4 AA4 4 ILE A 324 SER A 327 1 O SER A 327 N LEU A 236 SHEET 1 AA5 3 VAL A 268 GLN A 271 0 SHEET 2 AA5 3 ASP A 317 PHE A 322 -1 O TYR A 320 N VAL A 268 SHEET 3 AA5 3 LEU A 306 VAL A 309 -1 N ARG A 307 O LYS A 321 SHEET 1 AA6 9 ARG B 61 PRO B 70 0 SHEET 2 AA6 9 LYS B 75 SER B 86 -1 O LEU B 80 N LYS B 65 SHEET 3 AA6 9 TYR B 14 VAL B 20 -1 N THR B 19 O SER B 86 SHEET 4 AA6 9 LEU B 6 GLY B 8 -1 N ARG B 7 O TYR B 15 SHEET 5 AA6 9 VAL B 170 ILE B 176 -1 O GLY B 172 N LEU B 6 SHEET 6 AA6 9 PHE B 150 CYS B 155 -1 N GLN B 153 O SER B 173 SHEET 7 AA6 9 PHE B 341 ASP B 346 -1 O PHE B 345 N PHE B 150 SHEET 8 AA6 9 ARG B 351 SER B 357 -1 O ALA B 355 N TYR B 342 SHEET 9 AA6 9 TYR B 184 PRO B 192 -1 N TRP B 189 O PHE B 354 SHEET 1 AA713 ARG B 61 PRO B 70 0 SHEET 2 AA713 LYS B 75 SER B 86 -1 O LEU B 80 N LYS B 65 SHEET 3 AA713 THR B 94 ASP B 106 -1 O ILE B 99 N GLY B 81 SHEET 4 AA713 PHE B 38 GLY B 41 1 N VAL B 40 O ILE B 102 SHEET 5 AA713 GLY B 117 GLY B 120 -1 O ILE B 118 N ALA B 39 SHEET 6 AA713 GLN B 25 ASP B 32 1 N LEU B 30 O LEU B 119 SHEET 7 AA713 TYR B 14 VAL B 20 -1 N VAL B 16 O ILE B 29 SHEET 8 AA713 LEU B 6 GLY B 8 -1 N ARG B 7 O TYR B 15 SHEET 9 AA713 VAL B 170 ILE B 176 -1 O GLY B 172 N LEU B 6 SHEET 10 AA713 PHE B 150 CYS B 155 -1 N GLN B 153 O SER B 173 SHEET 11 AA713 PHE B 341 ASP B 346 -1 O PHE B 345 N PHE B 150 SHEET 12 AA713 ARG B 351 SER B 357 -1 O ALA B 355 N TYR B 342 SHEET 13 AA713 TYR B 184 PRO B 192 -1 N TRP B 189 O PHE B 354 SHEET 1 AA8 5 GLN B 211 ASP B 212 0 SHEET 2 AA8 5 ILE B 203 ILE B 208 -1 N ILE B 208 O GLN B 211 SHEET 3 AA8 5 ILE B 283 MET B 288 -1 O TYR B 286 N ARG B 205 SHEET 4 AA8 5 GLN B 294 ILE B 300 -1 O ILE B 300 N ILE B 283 SHEET 5 AA8 5 ALA B 369 VAL B 375 -1 O GLU B 371 N ARG B 297 SHEET 1 AA9 4 SER B 225 VAL B 227 0 SHEET 2 AA9 4 THR B 331 MET B 333 1 O MET B 333 N ILE B 226 SHEET 3 AA9 4 LEU B 234 PRO B 237 -1 N ARG B 235 O VAL B 332 SHEET 4 AA9 4 ILE B 324 SER B 327 1 O SER B 327 N LEU B 236 SHEET 1 AB1 3 VAL B 268 TRP B 270 0 SHEET 2 AB1 3 ASP B 318 PHE B 322 -1 O TYR B 320 N VAL B 268 SHEET 3 AB1 3 LEU B 306 VAL B 309 -1 N ARG B 307 O LYS B 321 SHEET 1 AB2 9 ARG C 61 PRO C 70 0 SHEET 2 AB2 9 LYS C 75 SER C 86 -1 O LEU C 80 N LYS C 65 SHEET 3 AB2 9 TYR C 14 VAL C 20 -1 N THR C 19 O SER C 86 SHEET 4 AB2 9 LEU C 6 GLY C 8 -1 N ARG C 7 O TYR C 15 SHEET 5 AB2 9 VAL C 170 ILE C 176 -1 O GLY C 172 N LEU C 6 SHEET 6 AB2 9 PHE C 150 LEU C 154 -1 N GLN C 153 O SER C 173 SHEET 7 AB2 9 PHE C 341 ASP C 346 -1 O PHE C 345 N PHE C 150 SHEET 8 AB2 9 ARG C 351 SER C 357 -1 O ALA C 355 N TYR C 342 SHEET 9 AB2 9 TYR C 184 PRO C 192 -1 N THR C 191 O ILE C 352 SHEET 1 AB313 ARG C 61 PRO C 70 0 SHEET 2 AB313 LYS C 75 SER C 86 -1 O LEU C 80 N LYS C 65 SHEET 3 AB313 VAL C 95 ASP C 106 -1 O ILE C 99 N GLY C 81 SHEET 4 AB313 PHE C 38 GLY C 41 1 N VAL C 40 O ILE C 102 SHEET 5 AB313 GLY C 117 GLY C 120 -1 O ILE C 118 N ALA C 39 SHEET 6 AB313 GLN C 25 ASP C 32 1 N LEU C 30 O LEU C 119 SHEET 7 AB313 TYR C 14 VAL C 20 -1 N VAL C 16 O ILE C 29 SHEET 8 AB313 LEU C 6 GLY C 8 -1 N ARG C 7 O TYR C 15 SHEET 9 AB313 VAL C 170 ILE C 176 -1 O GLY C 172 N LEU C 6 SHEET 10 AB313 PHE C 150 LEU C 154 -1 N GLN C 153 O SER C 173 SHEET 11 AB313 PHE C 341 ASP C 346 -1 O PHE C 345 N PHE C 150 SHEET 12 AB313 ARG C 351 SER C 357 -1 O ALA C 355 N TYR C 342 SHEET 13 AB313 TYR C 184 PRO C 192 -1 N THR C 191 O ILE C 352 SHEET 1 AB4 5 GLU C 200 VAL C 201 0 SHEET 2 AB4 5 SER C 225 VAL C 227 -1 O SER C 225 N VAL C 201 SHEET 3 AB4 5 THR C 331 MET C 333 1 O MET C 333 N ILE C 226 SHEET 4 AB4 5 LEU C 234 PRO C 237 -1 N ARG C 235 O VAL C 332 SHEET 5 AB4 5 ILE C 324 SER C 327 1 O SER C 327 N LEU C 236 SHEET 1 AB5 5 GLN C 211 ASP C 212 0 SHEET 2 AB5 5 ILE C 203 ILE C 208 -1 N ILE C 208 O GLN C 211 SHEET 3 AB5 5 ILE C 283 LEU C 287 -1 O SER C 284 N GLU C 207 SHEET 4 AB5 5 SER C 295 ILE C 300 -1 O ILE C 300 N ILE C 283 SHEET 5 AB5 5 ALA C 369 PHE C 374 -1 O GLU C 371 N ARG C 297 SHEET 1 AB6 3 VAL C 268 TRP C 270 0 SHEET 2 AB6 3 ASP C 318 PHE C 322 -1 O TYR C 320 N VAL C 268 SHEET 3 AB6 3 LEU C 306 VAL C 309 -1 N ARG C 307 O LYS C 321 SSBOND 1 CYS A 155 CYS A 359 1555 1555 2.06 SSBOND 2 CYS A 217 CYS A 382 1555 1555 2.07 SSBOND 3 CYS A 269 CYS A 319 1555 1555 2.05 SSBOND 4 CYS B 155 CYS B 359 1555 1555 2.06 SSBOND 5 CYS B 217 CYS B 382 1555 1555 2.07 SSBOND 6 CYS B 269 CYS B 319 1555 1555 2.04 SSBOND 7 CYS C 155 CYS C 359 1555 1555 2.06 SSBOND 8 CYS C 217 CYS C 382 1555 1555 2.06 SSBOND 9 CYS C 269 CYS C 319 1555 1555 2.05 CISPEP 1 SER A 22 PRO A 23 0 -1.24 CISPEP 2 ARG A 128 PRO A 129 0 2.70 CISPEP 3 TYR A 222 ASP A 223 0 8.59 CISPEP 4 GLY A 372 PRO A 373 0 -1.26 CISPEP 5 SER B 22 PRO B 23 0 -4.12 CISPEP 6 ARG B 128 PRO B 129 0 1.26 CISPEP 7 TYR B 222 ASP B 223 0 4.07 CISPEP 8 GLY B 372 PRO B 373 0 -4.13 CISPEP 9 SER C 22 PRO C 23 0 -5.43 CISPEP 10 ARG C 128 PRO C 129 0 3.17 CISPEP 11 TYR C 222 ASP C 223 0 2.79 CISPEP 12 GLY C 372 PRO C 373 0 2.56 SITE 1 AC1 18 GLY A 11 GLN A 12 GLY A 13 LEU A 30 SITE 2 AC1 18 ASP A 32 GLY A 34 PRO A 70 TYR A 71 SITE 3 AC1 18 THR A 72 GLN A 73 ILE A 110 ILE A 126 SITE 4 AC1 18 TYR A 198 ASP A 228 GLY A 230 THR A 231 SITE 5 AC1 18 THR A 232 HOH A 502 SITE 1 AC2 16 GLY B 11 GLN B 12 GLY B 13 LEU B 30 SITE 2 AC2 16 ASP B 32 GLY B 34 PRO B 70 TYR B 71 SITE 3 AC2 16 THR B 72 GLN B 73 ILE B 110 TYR B 198 SITE 4 AC2 16 ASP B 228 GLY B 230 THR B 231 THR B 232 SITE 1 AC3 16 GLY C 11 GLN C 12 GLY C 13 LEU C 30 SITE 2 AC3 16 ASP C 32 GLY C 34 PRO C 70 TYR C 71 SITE 3 AC3 16 THR C 72 GLN C 73 TYR C 198 ASP C 228 SITE 4 AC3 16 GLY C 230 THR C 231 THR C 232 HOH C 501 CRYST1 82.244 103.781 100.961 90.00 103.04 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012159 0.000000 0.002816 0.00000 SCALE2 0.000000 0.009636 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010167 0.00000