data_5R55 # _entry.id 5R55 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5R55 pdb_00005r55 10.2210/pdb5r55/pdb WWPDB D_1001402782 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-07-01 2 'Structure model' 1 1 2024-03-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.entry_id 5R55 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.recvd_initial_deposition_date 2020-02-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Diaz-Saez, L.' 1 ? 'Talon, R.' 2 ? 'Krojer, T.' 3 ? 'Burgess-Brown, N.A.' 4 ? 'Arrowsmith, C.H.' 5 ? 'Edwards, A.M.' 6 ? 'Bountra, C.' 7 ? 'von Delft, F.' 8 ? 'Huber, K.V.M.' 9 ? # _citation.id primary _citation.title 'PanDDA analysis group deposition' _citation.journal_abbrev 'To Be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.identifier_ORCID _citation_author.ordinal primary 'Diaz-Saez, L.' ? 1 primary 'Talon, R.' ? 2 primary 'Krojer, T.' ? 3 primary 'Burgess-Brown, N.A.' ? 4 primary 'Arrowsmith, C.H.' ? 5 primary 'Edwards, A.M.' ? 6 primary 'Bountra, C.' ? 7 primary 'von Delft, F.' ? 8 primary 'Huber, K.V.M.' ? 9 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uridine diphosphate glucose pyrophosphatase NUDT22' 32706.898 1 3.6.1.45 ? ? ? 2 non-polymer syn '~{N}-methyl-1-pyridin-4-yl-methanamine' 122.168 1 ? ? ? ? 3 non-polymer syn 'DIMETHYL SULFOXIDE' 78.133 3 ? ? ? ? 4 water nat water 18.015 159 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'UGPPase,Nucleoside diphosphate-linked moiety X motif 22,Nudix motif 22' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMDPEVTLLLQCPGGGLPQEQIQAELSPAHDRRPLPGGDEAITAIWETRLKAQPWLFDAPKFRLHSATLAPIGSRGPQLL LRLGLTSYRDFLGTNWSSSAAWLRQQGATDWGDTQAYLADPLGVGAALATADDFLVFLRRSRQVAEAPGLVDVPGGHPEP QALCPGGSPQHQDLAGQLVVHELFSSVLQEICDEVNLPLLTLSQPLLLGIARNETSAGRASAEFYVQCSLTSEQVRKHYL SGGPEAHESTGIFFVETQNVRRLPETEMWAELCPSAKGAIILYNRVQGSPTGAALGSPALLPPL ; _entity_poly.pdbx_seq_one_letter_code_can ;SMDPEVTLLLQCPGGGLPQEQIQAELSPAHDRRPLPGGDEAITAIWETRLKAQPWLFDAPKFRLHSATLAPIGSRGPQLL LRLGLTSYRDFLGTNWSSSAAWLRQQGATDWGDTQAYLADPLGVGAALATADDFLVFLRRSRQVAEAPGLVDVPGGHPEP QALCPGGSPQHQDLAGQLVVHELFSSVLQEICDEVNLPLLTLSQPLLLGIARNETSAGRASAEFYVQCSLTSEQVRKHYL SGGPEAHESTGIFFVETQNVRRLPETEMWAELCPSAKGAIILYNRVQGSPTGAALGSPALLPPL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '~{N}-methyl-1-pyridin-4-yl-methanamine' RYP 3 'DIMETHYL SULFOXIDE' DMS 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 ASP n 1 4 PRO n 1 5 GLU n 1 6 VAL n 1 7 THR n 1 8 LEU n 1 9 LEU n 1 10 LEU n 1 11 GLN n 1 12 CYS n 1 13 PRO n 1 14 GLY n 1 15 GLY n 1 16 GLY n 1 17 LEU n 1 18 PRO n 1 19 GLN n 1 20 GLU n 1 21 GLN n 1 22 ILE n 1 23 GLN n 1 24 ALA n 1 25 GLU n 1 26 LEU n 1 27 SER n 1 28 PRO n 1 29 ALA n 1 30 HIS n 1 31 ASP n 1 32 ARG n 1 33 ARG n 1 34 PRO n 1 35 LEU n 1 36 PRO n 1 37 GLY n 1 38 GLY n 1 39 ASP n 1 40 GLU n 1 41 ALA n 1 42 ILE n 1 43 THR n 1 44 ALA n 1 45 ILE n 1 46 TRP n 1 47 GLU n 1 48 THR n 1 49 ARG n 1 50 LEU n 1 51 LYS n 1 52 ALA n 1 53 GLN n 1 54 PRO n 1 55 TRP n 1 56 LEU n 1 57 PHE n 1 58 ASP n 1 59 ALA n 1 60 PRO n 1 61 LYS n 1 62 PHE n 1 63 ARG n 1 64 LEU n 1 65 HIS n 1 66 SER n 1 67 ALA n 1 68 THR n 1 69 LEU n 1 70 ALA n 1 71 PRO n 1 72 ILE n 1 73 GLY n 1 74 SER n 1 75 ARG n 1 76 GLY n 1 77 PRO n 1 78 GLN n 1 79 LEU n 1 80 LEU n 1 81 LEU n 1 82 ARG n 1 83 LEU n 1 84 GLY n 1 85 LEU n 1 86 THR n 1 87 SER n 1 88 TYR n 1 89 ARG n 1 90 ASP n 1 91 PHE n 1 92 LEU n 1 93 GLY n 1 94 THR n 1 95 ASN n 1 96 TRP n 1 97 SER n 1 98 SER n 1 99 SER n 1 100 ALA n 1 101 ALA n 1 102 TRP n 1 103 LEU n 1 104 ARG n 1 105 GLN n 1 106 GLN n 1 107 GLY n 1 108 ALA n 1 109 THR n 1 110 ASP n 1 111 TRP n 1 112 GLY n 1 113 ASP n 1 114 THR n 1 115 GLN n 1 116 ALA n 1 117 TYR n 1 118 LEU n 1 119 ALA n 1 120 ASP n 1 121 PRO n 1 122 LEU n 1 123 GLY n 1 124 VAL n 1 125 GLY n 1 126 ALA n 1 127 ALA n 1 128 LEU n 1 129 ALA n 1 130 THR n 1 131 ALA n 1 132 ASP n 1 133 ASP n 1 134 PHE n 1 135 LEU n 1 136 VAL n 1 137 PHE n 1 138 LEU n 1 139 ARG n 1 140 ARG n 1 141 SER n 1 142 ARG n 1 143 GLN n 1 144 VAL n 1 145 ALA n 1 146 GLU n 1 147 ALA n 1 148 PRO n 1 149 GLY n 1 150 LEU n 1 151 VAL n 1 152 ASP n 1 153 VAL n 1 154 PRO n 1 155 GLY n 1 156 GLY n 1 157 HIS n 1 158 PRO n 1 159 GLU n 1 160 PRO n 1 161 GLN n 1 162 ALA n 1 163 LEU n 1 164 CYS n 1 165 PRO n 1 166 GLY n 1 167 GLY n 1 168 SER n 1 169 PRO n 1 170 GLN n 1 171 HIS n 1 172 GLN n 1 173 ASP n 1 174 LEU n 1 175 ALA n 1 176 GLY n 1 177 GLN n 1 178 LEU n 1 179 VAL n 1 180 VAL n 1 181 HIS n 1 182 GLU n 1 183 LEU n 1 184 PHE n 1 185 SER n 1 186 SER n 1 187 VAL n 1 188 LEU n 1 189 GLN n 1 190 GLU n 1 191 ILE n 1 192 CYS n 1 193 ASP n 1 194 GLU n 1 195 VAL n 1 196 ASN n 1 197 LEU n 1 198 PRO n 1 199 LEU n 1 200 LEU n 1 201 THR n 1 202 LEU n 1 203 SER n 1 204 GLN n 1 205 PRO n 1 206 LEU n 1 207 LEU n 1 208 LEU n 1 209 GLY n 1 210 ILE n 1 211 ALA n 1 212 ARG n 1 213 ASN n 1 214 GLU n 1 215 THR n 1 216 SER n 1 217 ALA n 1 218 GLY n 1 219 ARG n 1 220 ALA n 1 221 SER n 1 222 ALA n 1 223 GLU n 1 224 PHE n 1 225 TYR n 1 226 VAL n 1 227 GLN n 1 228 CYS n 1 229 SER n 1 230 LEU n 1 231 THR n 1 232 SER n 1 233 GLU n 1 234 GLN n 1 235 VAL n 1 236 ARG n 1 237 LYS n 1 238 HIS n 1 239 TYR n 1 240 LEU n 1 241 SER n 1 242 GLY n 1 243 GLY n 1 244 PRO n 1 245 GLU n 1 246 ALA n 1 247 HIS n 1 248 GLU n 1 249 SER n 1 250 THR n 1 251 GLY n 1 252 ILE n 1 253 PHE n 1 254 PHE n 1 255 VAL n 1 256 GLU n 1 257 THR n 1 258 GLN n 1 259 ASN n 1 260 VAL n 1 261 ARG n 1 262 ARG n 1 263 LEU n 1 264 PRO n 1 265 GLU n 1 266 THR n 1 267 GLU n 1 268 MET n 1 269 TRP n 1 270 ALA n 1 271 GLU n 1 272 LEU n 1 273 CYS n 1 274 PRO n 1 275 SER n 1 276 ALA n 1 277 LYS n 1 278 GLY n 1 279 ALA n 1 280 ILE n 1 281 ILE n 1 282 LEU n 1 283 TYR n 1 284 ASN n 1 285 ARG n 1 286 VAL n 1 287 GLN n 1 288 GLY n 1 289 SER n 1 290 PRO n 1 291 THR n 1 292 GLY n 1 293 ALA n 1 294 ALA n 1 295 LEU n 1 296 GLY n 1 297 SER n 1 298 PRO n 1 299 ALA n 1 300 LEU n 1 301 LEU n 1 302 PRO n 1 303 PRO n 1 304 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 304 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NUDT22, PP11246' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DMS non-polymer . 'DIMETHYL SULFOXIDE' ? 'C2 H6 O S' 78.133 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 RYP non-polymer . '~{N}-methyl-1-pyridin-4-yl-methanamine' ? 'C7 H10 N2' 122.168 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 0 ? ? ? A . n A 1 2 MET 2 1 ? ? ? A . n A 1 3 ASP 3 2 2 ASP ASP A . n A 1 4 PRO 4 3 3 PRO PRO A . n A 1 5 GLU 5 4 4 GLU GLU A . n A 1 6 VAL 6 5 5 VAL VAL A . n A 1 7 THR 7 6 6 THR THR A . n A 1 8 LEU 8 7 7 LEU LEU A . n A 1 9 LEU 9 8 8 LEU LEU A . n A 1 10 LEU 10 9 9 LEU LEU A . n A 1 11 GLN 11 10 10 GLN GLN A . n A 1 12 CYS 12 11 11 CYS CYS A . n A 1 13 PRO 13 12 12 PRO PRO A . n A 1 14 GLY 14 13 13 GLY GLY A . n A 1 15 GLY 15 14 14 GLY GLY A . n A 1 16 GLY 16 15 15 GLY GLY A . n A 1 17 LEU 17 16 16 LEU LEU A . n A 1 18 PRO 18 17 17 PRO PRO A . n A 1 19 GLN 19 18 18 GLN GLN A . n A 1 20 GLU 20 19 19 GLU GLU A . n A 1 21 GLN 21 20 20 GLN GLN A . n A 1 22 ILE 22 21 21 ILE ILE A . n A 1 23 GLN 23 22 22 GLN GLN A . n A 1 24 ALA 24 23 23 ALA ALA A . n A 1 25 GLU 25 24 24 GLU GLU A . n A 1 26 LEU 26 25 25 LEU LEU A . n A 1 27 SER 27 26 26 SER SER A . n A 1 28 PRO 28 27 27 PRO PRO A . n A 1 29 ALA 29 28 28 ALA ALA A . n A 1 30 HIS 30 29 29 HIS HIS A . n A 1 31 ASP 31 30 30 ASP ASP A . n A 1 32 ARG 32 31 31 ARG ARG A . n A 1 33 ARG 33 32 32 ARG ARG A . n A 1 34 PRO 34 33 33 PRO PRO A . n A 1 35 LEU 35 34 34 LEU LEU A . n A 1 36 PRO 36 35 35 PRO PRO A . n A 1 37 GLY 37 36 36 GLY GLY A . n A 1 38 GLY 38 37 37 GLY GLY A . n A 1 39 ASP 39 38 38 ASP ASP A . n A 1 40 GLU 40 39 39 GLU GLU A . n A 1 41 ALA 41 40 40 ALA ALA A . n A 1 42 ILE 42 41 41 ILE ILE A . n A 1 43 THR 43 42 42 THR THR A . n A 1 44 ALA 44 43 43 ALA ALA A . n A 1 45 ILE 45 44 44 ILE ILE A . n A 1 46 TRP 46 45 45 TRP TRP A . n A 1 47 GLU 47 46 46 GLU GLU A . n A 1 48 THR 48 47 47 THR THR A . n A 1 49 ARG 49 48 48 ARG ARG A . n A 1 50 LEU 50 49 49 LEU LEU A . n A 1 51 LYS 51 50 50 LYS LYS A . n A 1 52 ALA 52 51 51 ALA ALA A . n A 1 53 GLN 53 52 52 GLN GLN A . n A 1 54 PRO 54 53 53 PRO PRO A . n A 1 55 TRP 55 54 54 TRP TRP A . n A 1 56 LEU 56 55 55 LEU LEU A . n A 1 57 PHE 57 56 56 PHE PHE A . n A 1 58 ASP 58 57 57 ASP ASP A . n A 1 59 ALA 59 58 58 ALA ALA A . n A 1 60 PRO 60 59 59 PRO PRO A . n A 1 61 LYS 61 60 60 LYS LYS A . n A 1 62 PHE 62 61 61 PHE PHE A . n A 1 63 ARG 63 62 62 ARG ARG A . n A 1 64 LEU 64 63 63 LEU LEU A . n A 1 65 HIS 65 64 64 HIS HIS A . n A 1 66 SER 66 65 65 SER SER A . n A 1 67 ALA 67 66 66 ALA ALA A . n A 1 68 THR 68 67 67 THR THR A . n A 1 69 LEU 69 68 68 LEU LEU A . n A 1 70 ALA 70 69 69 ALA ALA A . n A 1 71 PRO 71 70 70 PRO PRO A . n A 1 72 ILE 72 71 71 ILE ILE A . n A 1 73 GLY 73 72 72 GLY GLY A . n A 1 74 SER 74 73 73 SER SER A . n A 1 75 ARG 75 74 74 ARG ARG A . n A 1 76 GLY 76 75 75 GLY GLY A . n A 1 77 PRO 77 76 76 PRO PRO A . n A 1 78 GLN 78 77 77 GLN GLN A . n A 1 79 LEU 79 78 78 LEU LEU A . n A 1 80 LEU 80 79 79 LEU LEU A . n A 1 81 LEU 81 80 80 LEU LEU A . n A 1 82 ARG 82 81 81 ARG ARG A . n A 1 83 LEU 83 82 82 LEU LEU A . n A 1 84 GLY 84 83 83 GLY GLY A . n A 1 85 LEU 85 84 84 LEU LEU A . n A 1 86 THR 86 85 85 THR THR A . n A 1 87 SER 87 86 86 SER SER A . n A 1 88 TYR 88 87 87 TYR TYR A . n A 1 89 ARG 89 88 88 ARG ARG A . n A 1 90 ASP 90 89 89 ASP ASP A . n A 1 91 PHE 91 90 90 PHE PHE A . n A 1 92 LEU 92 91 91 LEU LEU A . n A 1 93 GLY 93 92 92 GLY GLY A . n A 1 94 THR 94 93 93 THR THR A . n A 1 95 ASN 95 94 94 ASN ASN A . n A 1 96 TRP 96 95 95 TRP TRP A . n A 1 97 SER 97 96 96 SER SER A . n A 1 98 SER 98 97 97 SER SER A . n A 1 99 SER 99 98 98 SER SER A . n A 1 100 ALA 100 99 99 ALA ALA A . n A 1 101 ALA 101 100 100 ALA ALA A . n A 1 102 TRP 102 101 101 TRP TRP A . n A 1 103 LEU 103 102 102 LEU LEU A . n A 1 104 ARG 104 103 103 ARG ARG A . n A 1 105 GLN 105 104 104 GLN GLN A . n A 1 106 GLN 106 105 105 GLN GLN A . n A 1 107 GLY 107 106 106 GLY GLY A . n A 1 108 ALA 108 107 107 ALA ALA A . n A 1 109 THR 109 108 108 THR THR A . n A 1 110 ASP 110 109 109 ASP ASP A . n A 1 111 TRP 111 110 110 TRP TRP A . n A 1 112 GLY 112 111 111 GLY GLY A . n A 1 113 ASP 113 112 112 ASP ASP A . n A 1 114 THR 114 113 113 THR THR A . n A 1 115 GLN 115 114 114 GLN GLN A . n A 1 116 ALA 116 115 115 ALA ALA A . n A 1 117 TYR 117 116 116 TYR TYR A . n A 1 118 LEU 118 117 117 LEU LEU A . n A 1 119 ALA 119 118 118 ALA ALA A . n A 1 120 ASP 120 119 119 ASP ASP A . n A 1 121 PRO 121 120 120 PRO PRO A . n A 1 122 LEU 122 121 121 LEU LEU A . n A 1 123 GLY 123 122 122 GLY GLY A . n A 1 124 VAL 124 123 123 VAL VAL A . n A 1 125 GLY 125 124 124 GLY GLY A . n A 1 126 ALA 126 125 125 ALA ALA A . n A 1 127 ALA 127 126 126 ALA ALA A . n A 1 128 LEU 128 127 127 LEU LEU A . n A 1 129 ALA 129 128 128 ALA ALA A . n A 1 130 THR 130 129 129 THR THR A . n A 1 131 ALA 131 130 130 ALA ALA A . n A 1 132 ASP 132 131 131 ASP ASP A . n A 1 133 ASP 133 132 132 ASP ASP A . n A 1 134 PHE 134 133 133 PHE PHE A . n A 1 135 LEU 135 134 134 LEU LEU A . n A 1 136 VAL 136 135 135 VAL VAL A . n A 1 137 PHE 137 136 136 PHE PHE A . n A 1 138 LEU 138 137 137 LEU LEU A . n A 1 139 ARG 139 138 138 ARG ARG A . n A 1 140 ARG 140 139 139 ARG ARG A . n A 1 141 SER 141 140 140 SER SER A . n A 1 142 ARG 142 141 141 ARG ARG A . n A 1 143 GLN 143 142 142 GLN GLN A . n A 1 144 VAL 144 143 143 VAL VAL A . n A 1 145 ALA 145 144 144 ALA ALA A . n A 1 146 GLU 146 145 145 GLU GLU A . n A 1 147 ALA 147 146 146 ALA ALA A . n A 1 148 PRO 148 147 147 PRO PRO A . n A 1 149 GLY 149 148 148 GLY GLY A . n A 1 150 LEU 150 149 149 LEU LEU A . n A 1 151 VAL 151 150 150 VAL VAL A . n A 1 152 ASP 152 151 151 ASP ASP A . n A 1 153 VAL 153 152 152 VAL VAL A . n A 1 154 PRO 154 153 153 PRO PRO A . n A 1 155 GLY 155 154 154 GLY GLY A . n A 1 156 GLY 156 155 155 GLY GLY A . n A 1 157 HIS 157 156 156 HIS HIS A . n A 1 158 PRO 158 157 157 PRO PRO A . n A 1 159 GLU 159 158 158 GLU GLU A . n A 1 160 PRO 160 159 159 PRO PRO A . n A 1 161 GLN 161 160 160 GLN GLN A . n A 1 162 ALA 162 161 ? ? ? A . n A 1 163 LEU 163 162 ? ? ? A . n A 1 164 CYS 164 163 ? ? ? A . n A 1 165 PRO 165 164 ? ? ? A . n A 1 166 GLY 166 165 ? ? ? A . n A 1 167 GLY 167 166 ? ? ? A . n A 1 168 SER 168 167 ? ? ? A . n A 1 169 PRO 169 168 ? ? ? A . n A 1 170 GLN 170 169 ? ? ? A . n A 1 171 HIS 171 170 ? ? ? A . n A 1 172 GLN 172 171 ? ? ? A . n A 1 173 ASP 173 172 172 ASP ASP A . n A 1 174 LEU 174 173 173 LEU LEU A . n A 1 175 ALA 175 174 174 ALA ALA A . n A 1 176 GLY 176 175 175 GLY GLY A . n A 1 177 GLN 177 176 176 GLN GLN A . n A 1 178 LEU 178 177 177 LEU LEU A . n A 1 179 VAL 179 178 178 VAL VAL A . n A 1 180 VAL 180 179 179 VAL VAL A . n A 1 181 HIS 181 180 180 HIS HIS A . n A 1 182 GLU 182 181 181 GLU GLU A . n A 1 183 LEU 183 182 182 LEU LEU A . n A 1 184 PHE 184 183 183 PHE PHE A . n A 1 185 SER 185 184 184 SER SER A . n A 1 186 SER 186 185 185 SER SER A . n A 1 187 VAL 187 186 186 VAL VAL A . n A 1 188 LEU 188 187 187 LEU LEU A . n A 1 189 GLN 189 188 188 GLN GLN A . n A 1 190 GLU 190 189 189 GLU GLU A . n A 1 191 ILE 191 190 190 ILE ILE A . n A 1 192 CYS 192 191 191 CYS CYS A . n A 1 193 ASP 193 192 192 ASP ASP A . n A 1 194 GLU 194 193 193 GLU GLU A . n A 1 195 VAL 195 194 194 VAL VAL A . n A 1 196 ASN 196 195 195 ASN ASN A . n A 1 197 LEU 197 196 196 LEU LEU A . n A 1 198 PRO 198 197 197 PRO PRO A . n A 1 199 LEU 199 198 198 LEU LEU A . n A 1 200 LEU 200 199 199 LEU LEU A . n A 1 201 THR 201 200 200 THR THR A . n A 1 202 LEU 202 201 201 LEU LEU A . n A 1 203 SER 203 202 202 SER SER A . n A 1 204 GLN 204 203 203 GLN GLN A . n A 1 205 PRO 205 204 204 PRO PRO A . n A 1 206 LEU 206 205 205 LEU LEU A . n A 1 207 LEU 207 206 206 LEU LEU A . n A 1 208 LEU 208 207 207 LEU LEU A . n A 1 209 GLY 209 208 208 GLY GLY A . n A 1 210 ILE 210 209 209 ILE ILE A . n A 1 211 ALA 211 210 210 ALA ALA A . n A 1 212 ARG 212 211 211 ARG ARG A . n A 1 213 ASN 213 212 212 ASN ASN A . n A 1 214 GLU 214 213 213 GLU GLU A . n A 1 215 THR 215 214 214 THR THR A . n A 1 216 SER 216 215 215 SER SER A . n A 1 217 ALA 217 216 216 ALA ALA A . n A 1 218 GLY 218 217 217 GLY GLY A . n A 1 219 ARG 219 218 218 ARG ARG A . n A 1 220 ALA 220 219 219 ALA ALA A . n A 1 221 SER 221 220 220 SER SER A . n A 1 222 ALA 222 221 221 ALA ALA A . n A 1 223 GLU 223 222 222 GLU GLU A . n A 1 224 PHE 224 223 223 PHE PHE A . n A 1 225 TYR 225 224 224 TYR TYR A . n A 1 226 VAL 226 225 225 VAL VAL A . n A 1 227 GLN 227 226 226 GLN GLN A . n A 1 228 CYS 228 227 227 CYS CYS A . n A 1 229 SER 229 228 228 SER SER A . n A 1 230 LEU 230 229 229 LEU LEU A . n A 1 231 THR 231 230 230 THR THR A . n A 1 232 SER 232 231 231 SER SER A . n A 1 233 GLU 233 232 232 GLU GLU A . n A 1 234 GLN 234 233 233 GLN GLN A . n A 1 235 VAL 235 234 234 VAL VAL A . n A 1 236 ARG 236 235 235 ARG ARG A . n A 1 237 LYS 237 236 236 LYS LYS A . n A 1 238 HIS 238 237 237 HIS HIS A . n A 1 239 TYR 239 238 238 TYR TYR A . n A 1 240 LEU 240 239 239 LEU LEU A . n A 1 241 SER 241 240 240 SER SER A . n A 1 242 GLY 242 241 241 GLY GLY A . n A 1 243 GLY 243 242 242 GLY GLY A . n A 1 244 PRO 244 243 243 PRO PRO A . n A 1 245 GLU 245 244 244 GLU GLU A . n A 1 246 ALA 246 245 245 ALA ALA A . n A 1 247 HIS 247 246 246 HIS HIS A . n A 1 248 GLU 248 247 247 GLU GLU A . n A 1 249 SER 249 248 248 SER SER A . n A 1 250 THR 250 249 249 THR THR A . n A 1 251 GLY 251 250 250 GLY GLY A . n A 1 252 ILE 252 251 251 ILE ILE A . n A 1 253 PHE 253 252 252 PHE PHE A . n A 1 254 PHE 254 253 253 PHE PHE A . n A 1 255 VAL 255 254 254 VAL VAL A . n A 1 256 GLU 256 255 255 GLU GLU A . n A 1 257 THR 257 256 256 THR THR A . n A 1 258 GLN 258 257 257 GLN GLN A . n A 1 259 ASN 259 258 258 ASN ASN A . n A 1 260 VAL 260 259 259 VAL VAL A . n A 1 261 ARG 261 260 260 ARG ARG A . n A 1 262 ARG 262 261 261 ARG ARG A . n A 1 263 LEU 263 262 262 LEU LEU A . n A 1 264 PRO 264 263 263 PRO PRO A . n A 1 265 GLU 265 264 264 GLU GLU A . n A 1 266 THR 266 265 265 THR THR A . n A 1 267 GLU 267 266 266 GLU GLU A . n A 1 268 MET 268 267 267 MET MET A . n A 1 269 TRP 269 268 268 TRP TRP A . n A 1 270 ALA 270 269 269 ALA ALA A . n A 1 271 GLU 271 270 270 GLU GLU A . n A 1 272 LEU 272 271 271 LEU LEU A . n A 1 273 CYS 273 272 272 CYS CYS A . n A 1 274 PRO 274 273 273 PRO PRO A . n A 1 275 SER 275 274 274 SER SER A . n A 1 276 ALA 276 275 275 ALA ALA A . n A 1 277 LYS 277 276 276 LYS LYS A . n A 1 278 GLY 278 277 277 GLY GLY A . n A 1 279 ALA 279 278 278 ALA ALA A . n A 1 280 ILE 280 279 279 ILE ILE A . n A 1 281 ILE 281 280 280 ILE ILE A . n A 1 282 LEU 282 281 281 LEU LEU A . n A 1 283 TYR 283 282 282 TYR TYR A . n A 1 284 ASN 284 283 283 ASN ASN A . n A 1 285 ARG 285 284 284 ARG ARG A . n A 1 286 VAL 286 285 285 VAL VAL A . n A 1 287 GLN 287 286 286 GLN GLN A . n A 1 288 GLY 288 287 287 GLY GLY A . n A 1 289 SER 289 288 288 SER SER A . n A 1 290 PRO 290 289 289 PRO PRO A . n A 1 291 THR 291 290 290 THR THR A . n A 1 292 GLY 292 291 291 GLY GLY A . n A 1 293 ALA 293 292 292 ALA ALA A . n A 1 294 ALA 294 293 293 ALA ALA A . n A 1 295 LEU 295 294 294 LEU LEU A . n A 1 296 GLY 296 295 295 GLY GLY A . n A 1 297 SER 297 296 296 SER SER A . n A 1 298 PRO 298 297 297 PRO PRO A . n A 1 299 ALA 299 298 298 ALA ALA A . n A 1 300 LEU 300 299 299 LEU LEU A . n A 1 301 LEU 301 300 300 LEU LEU A . n A 1 302 PRO 302 301 301 PRO PRO A . n A 1 303 PRO 303 302 302 PRO PRO A . n A 1 304 LEU 304 303 303 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RYP 1 401 401 RYP LIG A . C 3 DMS 1 402 1 DMS DMS A . D 3 DMS 1 403 2 DMS DMS A . E 3 DMS 1 404 3 DMS DMS A . F 4 HOH 1 501 147 HOH HOH A . F 4 HOH 2 502 158 HOH HOH A . F 4 HOH 3 503 112 HOH HOH A . F 4 HOH 4 504 65 HOH HOH A . F 4 HOH 5 505 157 HOH HOH A . F 4 HOH 6 506 156 HOH HOH A . F 4 HOH 7 507 93 HOH HOH A . F 4 HOH 8 508 132 HOH HOH A . F 4 HOH 9 509 62 HOH HOH A . F 4 HOH 10 510 107 HOH HOH A . F 4 HOH 11 511 138 HOH HOH A . F 4 HOH 12 512 145 HOH HOH A . F 4 HOH 13 513 37 HOH HOH A . F 4 HOH 14 514 116 HOH HOH A . F 4 HOH 15 515 141 HOH HOH A . F 4 HOH 16 516 99 HOH HOH A . F 4 HOH 17 517 56 HOH HOH A . F 4 HOH 18 518 40 HOH HOH A . F 4 HOH 19 519 90 HOH HOH A . F 4 HOH 20 520 82 HOH HOH A . F 4 HOH 21 521 50 HOH HOH A . F 4 HOH 22 522 83 HOH HOH A . F 4 HOH 23 523 45 HOH HOH A . F 4 HOH 24 524 1 HOH HOH A . F 4 HOH 25 525 75 HOH HOH A . F 4 HOH 26 526 47 HOH HOH A . F 4 HOH 27 527 34 HOH HOH A . F 4 HOH 28 528 74 HOH HOH A . F 4 HOH 29 529 146 HOH HOH A . F 4 HOH 30 530 61 HOH HOH A . F 4 HOH 31 531 125 HOH HOH A . F 4 HOH 32 532 3 HOH HOH A . F 4 HOH 33 533 120 HOH HOH A . F 4 HOH 34 534 28 HOH HOH A . F 4 HOH 35 535 41 HOH HOH A . F 4 HOH 36 536 115 HOH HOH A . F 4 HOH 37 537 13 HOH HOH A . F 4 HOH 38 538 71 HOH HOH A . F 4 HOH 39 539 123 HOH HOH A . F 4 HOH 40 540 29 HOH HOH A . F 4 HOH 41 541 91 HOH HOH A . F 4 HOH 42 542 6 HOH HOH A . F 4 HOH 43 543 102 HOH HOH A . F 4 HOH 44 544 21 HOH HOH A . F 4 HOH 45 545 137 HOH HOH A . F 4 HOH 46 546 84 HOH HOH A . F 4 HOH 47 547 134 HOH HOH A . F 4 HOH 48 548 58 HOH HOH A . F 4 HOH 49 549 2 HOH HOH A . F 4 HOH 50 550 88 HOH HOH A . F 4 HOH 51 551 8 HOH HOH A . F 4 HOH 52 552 72 HOH HOH A . F 4 HOH 53 553 5 HOH HOH A . F 4 HOH 54 554 129 HOH HOH A . F 4 HOH 55 555 63 HOH HOH A . F 4 HOH 56 556 111 HOH HOH A . F 4 HOH 57 557 10 HOH HOH A . F 4 HOH 58 558 143 HOH HOH A . F 4 HOH 59 559 96 HOH HOH A . F 4 HOH 60 560 127 HOH HOH A . F 4 HOH 61 561 57 HOH HOH A . F 4 HOH 62 562 24 HOH HOH A . F 4 HOH 63 563 130 HOH HOH A . F 4 HOH 64 564 30 HOH HOH A . F 4 HOH 65 565 19 HOH HOH A . F 4 HOH 66 566 160 HOH HOH A . F 4 HOH 67 567 73 HOH HOH A . F 4 HOH 68 568 14 HOH HOH A . F 4 HOH 69 569 133 HOH HOH A . F 4 HOH 70 570 117 HOH HOH A . F 4 HOH 71 571 27 HOH HOH A . F 4 HOH 72 572 9 HOH HOH A . F 4 HOH 73 573 55 HOH HOH A . F 4 HOH 74 574 105 HOH HOH A . F 4 HOH 75 575 23 HOH HOH A . F 4 HOH 76 576 36 HOH HOH A . F 4 HOH 77 577 38 HOH HOH A . F 4 HOH 78 578 66 HOH HOH A . F 4 HOH 79 579 113 HOH HOH A . F 4 HOH 80 580 11 HOH HOH A . F 4 HOH 81 581 4 HOH HOH A . F 4 HOH 82 582 67 HOH HOH A . F 4 HOH 83 583 86 HOH HOH A . F 4 HOH 84 584 12 HOH HOH A . F 4 HOH 85 585 39 HOH HOH A . F 4 HOH 86 586 114 HOH HOH A . F 4 HOH 87 587 118 HOH HOH A . F 4 HOH 88 588 31 HOH HOH A . F 4 HOH 89 589 97 HOH HOH A . F 4 HOH 90 590 124 HOH HOH A . F 4 HOH 91 591 60 HOH HOH A . F 4 HOH 92 592 94 HOH HOH A . F 4 HOH 93 593 15 HOH HOH A . F 4 HOH 94 594 135 HOH HOH A . F 4 HOH 95 595 100 HOH HOH A . F 4 HOH 96 596 148 HOH HOH A . F 4 HOH 97 597 42 HOH HOH A . F 4 HOH 98 598 68 HOH HOH A . F 4 HOH 99 599 87 HOH HOH A . F 4 HOH 100 600 155 HOH HOH A . F 4 HOH 101 601 51 HOH HOH A . F 4 HOH 102 602 121 HOH HOH A . F 4 HOH 103 603 101 HOH HOH A . F 4 HOH 104 604 85 HOH HOH A . F 4 HOH 105 605 98 HOH HOH A . F 4 HOH 106 606 152 HOH HOH A . F 4 HOH 107 607 18 HOH HOH A . F 4 HOH 108 608 46 HOH HOH A . F 4 HOH 109 609 59 HOH HOH A . F 4 HOH 110 610 77 HOH HOH A . F 4 HOH 111 611 44 HOH HOH A . F 4 HOH 112 612 43 HOH HOH A . F 4 HOH 113 613 33 HOH HOH A . F 4 HOH 114 614 20 HOH HOH A . F 4 HOH 115 615 126 HOH HOH A . F 4 HOH 116 616 153 HOH HOH A . F 4 HOH 117 617 7 HOH HOH A . F 4 HOH 118 618 95 HOH HOH A . F 4 HOH 119 619 25 HOH HOH A . F 4 HOH 120 620 128 HOH HOH A . F 4 HOH 121 621 154 HOH HOH A . F 4 HOH 122 622 136 HOH HOH A . F 4 HOH 123 623 119 HOH HOH A . F 4 HOH 124 624 131 HOH HOH A . F 4 HOH 125 625 150 HOH HOH A . F 4 HOH 126 626 26 HOH HOH A . F 4 HOH 127 627 103 HOH HOH A . F 4 HOH 128 628 144 HOH HOH A . F 4 HOH 129 629 35 HOH HOH A . F 4 HOH 130 630 49 HOH HOH A . F 4 HOH 131 631 122 HOH HOH A . F 4 HOH 132 632 22 HOH HOH A . F 4 HOH 133 633 106 HOH HOH A . F 4 HOH 134 634 32 HOH HOH A . F 4 HOH 135 635 104 HOH HOH A . F 4 HOH 136 636 108 HOH HOH A . F 4 HOH 137 637 92 HOH HOH A . F 4 HOH 138 638 149 HOH HOH A . F 4 HOH 139 639 48 HOH HOH A . F 4 HOH 140 640 80 HOH HOH A . F 4 HOH 141 641 70 HOH HOH A . F 4 HOH 142 642 142 HOH HOH A . F 4 HOH 143 643 89 HOH HOH A . F 4 HOH 144 644 76 HOH HOH A . F 4 HOH 145 645 54 HOH HOH A . F 4 HOH 146 646 151 HOH HOH A . F 4 HOH 147 647 17 HOH HOH A . F 4 HOH 148 648 81 HOH HOH A . F 4 HOH 149 649 16 HOH HOH A . F 4 HOH 150 650 64 HOH HOH A . F 4 HOH 151 651 159 HOH HOH A . F 4 HOH 152 652 79 HOH HOH A . F 4 HOH 153 653 140 HOH HOH A . F 4 HOH 154 654 53 HOH HOH A . F 4 HOH 155 655 162 HOH HOH A . F 4 HOH 156 656 161 HOH HOH A . F 4 HOH 157 657 109 HOH HOH A . F 4 HOH 158 658 110 HOH HOH A . F 4 HOH 159 659 52 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 74 ? NE ? A ARG 75 NE 2 1 Y 1 A ARG 74 ? CZ ? A ARG 75 CZ 3 1 Y 1 A ARG 74 ? NH1 ? A ARG 75 NH1 4 1 Y 1 A ARG 74 ? NH2 ? A ARG 75 NH2 5 1 Y 1 A GLN 142 ? CD ? A GLN 143 CD 6 1 Y 1 A GLN 142 ? OE1 ? A GLN 143 OE1 7 1 Y 1 A GLN 142 ? NE2 ? A GLN 143 NE2 8 1 Y 1 A GLN 160 ? CG ? A GLN 161 CG 9 1 Y 1 A GLN 160 ? CD ? A GLN 161 CD 10 1 Y 1 A GLN 160 ? OE1 ? A GLN 161 OE1 11 1 Y 1 A GLN 160 ? NE2 ? A GLN 161 NE2 12 1 Y 1 A ASP 172 ? CG ? A ASP 173 CG 13 1 Y 1 A ASP 172 ? OD1 ? A ASP 173 OD1 14 1 Y 1 A ASP 172 ? OD2 ? A ASP 173 OD2 15 1 Y 1 A LEU 303 ? CG ? A LEU 304 CG 16 1 Y 1 A LEU 303 ? CD1 ? A LEU 304 CD1 17 1 Y 1 A LEU 303 ? CD2 ? A LEU 304 CD2 # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 REFMAC 5.8.0238 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 2 Aimless 0.5.26 06/05/16 program 'Phil Evans' ? 'data scaling' http://www.mrc-lmb.cam.ac.uk/harry/pre/aimless.html ? ? 3 PDB_EXTRACT 3.23 'SEP. 23, 2016' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 XDS . ? program ? ? 'data reduction' ? ? ? 5 REFMAC . ? program ? ? phasing ? ? ? # _cell.entry_id 5R55 _cell.length_a 49.720 _cell.length_b 52.370 _cell.length_c 101.890 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5R55 _symmetry.Int_Tables_number 19 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? # _exptl.crystals_number 1 _exptl.entry_id 5R55 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity 0.000 _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.03 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 39.35 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.1M HEPES pH 7.5, 0.3M sodium/potassium phosphate, 15% PEG Smear High, 20% ethylene glycol' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.crystal_id 1 _diffrn.ambient_temp_details ? # _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2016-07-02 _diffrn_detector.diffrn_id 1 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.92819 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I04-1' _diffrn_source.pdbx_wavelength_list 0.92819 _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I04-1 _diffrn_source.pdbx_wavelength ? # _reflns.entry_id 5R55 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 46.580 _reflns.d_resolution_high 1.480 _reflns.number_obs 45159 _reflns.number_all ? _reflns.percent_possible_obs 99.900 _reflns.pdbx_Rmerge_I_obs 0.066 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.300 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.500 _reflns.pdbx_Rrim_I_all 0.071 _reflns.pdbx_Rpim_I_all 0.028 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_number_measured_all 293281 _reflns.pdbx_scaling_rejects 0 _reflns.pdbx_chi_squared ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.details ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_CC_half 1 1 1.480 1.520 ? 20102 ? ? 1.581 ? ? ? 6.100 ? 1.200 ? 3270 ? ? ? ? 99.700 1.729 0.690 0.492 1 2 6.620 46.580 ? 3434 ? ? 0.029 ? ? ? 5.800 ? 59.800 ? 591 ? ? ? ? 99.200 0.032 0.013 0.999 # _refine.entry_id 5R55 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 1.4800 _refine.ls_d_res_low 46.6200 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.8100 _refine.ls_number_reflns_obs 42662 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1912 _refine.ls_R_factor_R_work 0.1896 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2174 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.4000 _refine.ls_number_reflns_R_free 2431 _refine.ls_number_reflns_R_work ? _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 22.1180 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 1.6600 _refine.aniso_B[2][2] -1.5800 _refine.aniso_B[3][3] -0.0900 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9640 _refine.correlation_coeff_Fo_to_Fc_free 0.9510 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.0820 _refine.pdbx_overall_ESU_R_Free 0.0810 _refine.overall_SU_ML 0.0640 _refine.overall_SU_B 1.8290 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 5LF9 _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 434.370 _refine.B_iso_min 13.280 _refine.pdbx_overall_phase_error ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_R_factor_R_free_error_details ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.4800 _refine_hist.d_res_low 46.6200 _refine_hist.pdbx_number_atoms_ligand 21 _refine_hist.number_atoms_solvent 159 _refine_hist.number_atoms_total 2378 _refine_hist.pdbx_number_residues_total 291 _refine_hist.pdbx_B_iso_mean_ligand 43.59 _refine_hist.pdbx_B_iso_mean_solvent 39.47 _refine_hist.pdbx_number_atoms_protein 2198 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' r_bond_refined_d 2687 0.011 0.013 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 2279 0.001 0.017 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 3481 1.703 1.644 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 5289 1.432 1.584 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 340 6.660 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 128 32.916 22.734 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 374 12.312 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 16 13.134 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 317 0.083 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 3005 0.009 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 517 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1374 1.979 2.130 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 1365 1.956 2.121 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1656 2.790 3.165 ? ? # _refine_ls_shell.d_res_high 1.4800 _refine_ls_shell.d_res_low 1.5180 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.5700 _refine_ls_shell.number_reflns_R_work 3074 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.3290 _refine_ls_shell.R_factor_R_free 0.3220 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 189 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 3263 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_obs ? # _struct.entry_id 5R55 _struct.title 'PanDDA analysis group deposition -- Crystal Structure of human NUDT22 in complex with N13369a' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5R55 _struct_keywords.text ;PanDDA, SGC - Diamond I04-1 fragment screening, NUDIX domain, XChemExplorer, NUCLEOSIDE DIPHOSPHATE-LINKED MOIETY X MOTIF 22, HYDROLASE ; _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NUD22_HUMAN _struct_ref.pdbx_db_accession Q9BRQ3 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MDPEVTLLLQCPGGGLPQEQIQAELSPAHDRRPLPGGDEAITAIWETRLKAQPWLFDAPKFRLHSATLAPIGSRGPQLLL RLGLTSYRDFLGTNWSSSAAWLRQQGATDWGDTQAYLADPLGVGAALATADDFLVFLRRSRQVAEAPGLVDVPGGHPEPQ ALCPGGSPQHQDLAGQLVVHELFSSVLQEICDEVNLPLLTLSQPLLLGIARNETSAGRASAEFYVQCSLTSEQVRKHYLS GGPEAHESTGIFFVETQNVQRLLETEMWAELCPSAKGAIILYNRVQGSPTGAALGSPALLPPL ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5R55 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 304 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9BRQ3 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 303 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 303 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5R55 SER A 1 ? UNP Q9BRQ3 ? ? 'expression tag' 0 1 1 5R55 ARG A 261 ? UNP Q9BRQ3 GLN 260 conflict 260 2 1 5R55 PRO A 264 ? UNP Q9BRQ3 LEU 263 conflict 263 3 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 18 ? GLU A 20 ? PRO A 17 GLU A 19 5 ? 3 HELX_P HELX_P2 AA2 PRO A 28 ? ASP A 31 ? PRO A 27 ASP A 30 5 ? 4 HELX_P HELX_P3 AA3 ASP A 39 ? GLN A 53 ? ASP A 38 GLN A 52 1 ? 15 HELX_P HELX_P4 AA4 TYR A 88 ? THR A 94 ? TYR A 87 THR A 93 1 ? 7 HELX_P HELX_P5 AA5 SER A 99 ? GLY A 112 ? SER A 98 GLY A 111 1 ? 14 HELX_P HELX_P6 AA6 ALA A 175 ? ASN A 196 ? ALA A 174 ASN A 195 1 ? 22 HELX_P HELX_P7 AA7 PRO A 198 ? LEU A 202 ? PRO A 197 LEU A 201 5 ? 5 HELX_P HELX_P8 AA8 THR A 215 ? ALA A 217 ? THR A 214 ALA A 216 5 ? 3 HELX_P HELX_P9 AA9 THR A 231 ? GLY A 242 ? THR A 230 GLY A 241 1 ? 12 HELX_P HELX_P10 AB1 GLY A 243 ? HIS A 247 ? GLY A 242 HIS A 246 5 ? 5 HELX_P HELX_P11 AB2 THR A 257 ? ARG A 261 ? THR A 256 ARG A 260 1 ? 5 HELX_P HELX_P12 AB3 ARG A 262 ? THR A 266 ? ARG A 261 THR A 265 5 ? 5 HELX_P HELX_P13 AB4 MET A 268 ? LEU A 272 ? MET A 267 LEU A 271 5 ? 5 HELX_P HELX_P14 AB5 CYS A 273 ? GLN A 287 ? CYS A 272 GLN A 286 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 3 ? AA3 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 6 ? GLN A 11 ? VAL A 5 GLN A 10 AA1 2 LEU A 206 ? ASN A 213 ? LEU A 205 ASN A 212 AA1 3 ALA A 220 ? GLN A 227 ? ALA A 219 GLN A 226 AA1 4 GLY A 123 ? ALA A 129 ? GLY A 122 ALA A 128 AA1 5 GLY A 155 ? GLY A 156 ? GLY A 154 GLY A 155 AA2 1 ILE A 22 ? LEU A 26 ? ILE A 21 LEU A 25 AA2 2 LEU A 79 ? SER A 87 ? LEU A 78 SER A 86 AA2 3 PRO A 60 ? LEU A 69 ? PRO A 59 LEU A 68 AA3 1 VAL A 151 ? ASP A 152 ? VAL A 150 ASP A 151 AA3 2 PHE A 134 ? ARG A 139 ? PHE A 133 ARG A 138 AA3 3 GLY A 251 ? GLU A 256 ? GLY A 250 GLU A 255 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N THR A 7 ? N THR A 6 O ARG A 212 ? O ARG A 211 AA1 2 3 N ALA A 211 ? N ALA A 210 O SER A 221 ? O SER A 220 AA1 3 4 O PHE A 224 ? O PHE A 223 N ALA A 127 ? N ALA A 126 AA1 4 5 N VAL A 124 ? N VAL A 123 O GLY A 156 ? O GLY A 155 AA2 1 2 N GLU A 25 ? N GLU A 24 O LEU A 81 ? O LEU A 80 AA2 2 3 O ARG A 82 ? O ARG A 81 N SER A 66 ? N SER A 65 AA3 1 2 O ASP A 152 ? O ASP A 151 N LEU A 138 ? N LEU A 137 AA3 2 3 N PHE A 137 ? N PHE A 136 O PHE A 253 ? O PHE A 252 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A RYP 401 ? 9 'binding site for residue RYP A 401' AC2 Software A DMS 402 ? 2 'binding site for residue DMS A 402' AC3 Software A DMS 403 ? 3 'binding site for residue DMS A 403' AC4 Software A DMS 404 ? 6 'binding site for residue DMS A 404' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 VAL A 124 ? VAL A 123 . ? 1_555 ? 2 AC1 9 GLY A 125 ? GLY A 124 . ? 1_555 ? 3 AC1 9 ASP A 152 ? ASP A 151 . ? 1_555 ? 4 AC1 9 VAL A 153 ? VAL A 152 . ? 1_555 ? 5 AC1 9 GLY A 155 ? GLY A 154 . ? 1_555 ? 6 AC1 9 GLY A 156 ? GLY A 155 . ? 1_555 ? 7 AC1 9 SER A 221 ? SER A 220 . ? 1_555 ? 8 AC1 9 GLU A 223 ? GLU A 222 . ? 1_555 ? 9 AC1 9 SER A 275 ? SER A 274 . ? 1_555 ? 10 AC2 2 ARG A 142 ? ARG A 141 . ? 1_555 ? 11 AC2 2 HOH F . ? HOH A 521 . ? 1_555 ? 12 AC3 3 LEU A 188 ? LEU A 187 . ? 1_555 ? 13 AC3 3 LEU A 199 ? LEU A 198 . ? 1_555 ? 14 AC3 3 LEU A 202 ? LEU A 201 . ? 1_555 ? 15 AC4 6 THR A 109 ? THR A 108 . ? 1_555 ? 16 AC4 6 ASP A 110 ? ASP A 109 . ? 1_555 ? 17 AC4 6 PRO A 244 ? PRO A 243 . ? 1_565 ? 18 AC4 6 HIS A 247 ? HIS A 246 . ? 1_565 ? 19 AC4 6 THR A 250 ? THR A 249 . ? 1_565 ? 20 AC4 6 HOH F . ? HOH A 584 . ? 1_565 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 551 ? ? O A HOH 579 ? ? 1.22 2 1 O A HOH 536 ? ? O A HOH 640 ? ? 1.49 3 1 NH1 A ARG 88 ? ? O A HOH 501 ? ? 1.54 4 1 O A HOH 519 ? ? O A HOH 587 ? ? 1.59 5 1 CD A ARG 88 ? ? O A HOH 501 ? ? 1.61 6 1 OE1 A GLU 255 ? ? O A HOH 502 ? ? 1.65 7 1 O A HOH 529 ? ? O A HOH 542 ? ? 1.76 8 1 NE A ARG 88 ? ? O A HOH 501 ? ? 1.78 9 1 CZ A ARG 88 ? ? O A HOH 501 ? ? 1.81 10 1 O A HOH 591 ? ? O A HOH 608 ? ? 2.04 11 1 CG A ARG 88 ? ? O A HOH 501 ? ? 2.06 12 1 O A ALA 69 ? ? O A HOH 503 ? ? 2.08 13 1 OD2 A ASP 192 ? ? O A HOH 504 ? ? 2.09 14 1 O A HOH 647 ? ? O A HOH 654 ? ? 2.17 15 1 O A HOH 546 ? ? O A HOH 586 ? ? 2.18 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 519 ? ? 1_555 O A HOH 570 ? ? 3_655 1.67 2 1 O A HOH 640 ? ? 1_555 O A HOH 641 ? ? 4_565 1.80 3 1 O A HOH 514 ? ? 1_555 O A HOH 579 ? ? 2_564 2.09 4 1 O A HOH 507 ? ? 1_555 O A HOH 587 ? ? 3_645 2.12 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CD _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 GLU _pdbx_validate_rmsd_bond.auth_seq_id_1 255 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OE1 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 GLU _pdbx_validate_rmsd_bond.auth_seq_id_2 255 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.385 _pdbx_validate_rmsd_bond.bond_target_value 1.252 _pdbx_validate_rmsd_bond.bond_deviation 0.133 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.011 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 93 ? ? -127.88 -85.07 2 1 ASP A 132 ? A 70.37 57.59 3 1 ASP A 132 ? B 81.96 43.49 4 1 SER A 288 ? ? 35.10 80.99 # _phasing.method MR # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 659 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 8.03 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 0 ? A SER 1 2 1 Y 1 A MET 1 ? A MET 2 3 1 Y 1 A ALA 161 ? A ALA 162 4 1 Y 1 A LEU 162 ? A LEU 163 5 1 Y 1 A CYS 163 ? A CYS 164 6 1 Y 1 A PRO 164 ? A PRO 165 7 1 Y 1 A GLY 165 ? A GLY 166 8 1 Y 1 A GLY 166 ? A GLY 167 9 1 Y 1 A SER 167 ? A SER 168 10 1 Y 1 A PRO 168 ? A PRO 169 11 1 Y 1 A GLN 169 ? A GLN 170 12 1 Y 1 A HIS 170 ? A HIS 171 13 1 Y 1 A GLN 171 ? A GLN 172 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DMS S S N N 88 DMS O O N N 89 DMS C1 C N N 90 DMS C2 C N N 91 DMS H11 H N N 92 DMS H12 H N N 93 DMS H13 H N N 94 DMS H21 H N N 95 DMS H22 H N N 96 DMS H23 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 HIS N N N N 147 HIS CA C N S 148 HIS C C N N 149 HIS O O N N 150 HIS CB C N N 151 HIS CG C Y N 152 HIS ND1 N Y N 153 HIS CD2 C Y N 154 HIS CE1 C Y N 155 HIS NE2 N Y N 156 HIS OXT O N N 157 HIS H H N N 158 HIS H2 H N N 159 HIS HA H N N 160 HIS HB2 H N N 161 HIS HB3 H N N 162 HIS HD1 H N N 163 HIS HD2 H N N 164 HIS HE1 H N N 165 HIS HE2 H N N 166 HIS HXT H N N 167 HOH O O N N 168 HOH H1 H N N 169 HOH H2 H N N 170 ILE N N N N 171 ILE CA C N S 172 ILE C C N N 173 ILE O O N N 174 ILE CB C N S 175 ILE CG1 C N N 176 ILE CG2 C N N 177 ILE CD1 C N N 178 ILE OXT O N N 179 ILE H H N N 180 ILE H2 H N N 181 ILE HA H N N 182 ILE HB H N N 183 ILE HG12 H N N 184 ILE HG13 H N N 185 ILE HG21 H N N 186 ILE HG22 H N N 187 ILE HG23 H N N 188 ILE HD11 H N N 189 ILE HD12 H N N 190 ILE HD13 H N N 191 ILE HXT H N N 192 LEU N N N N 193 LEU CA C N S 194 LEU C C N N 195 LEU O O N N 196 LEU CB C N N 197 LEU CG C N N 198 LEU CD1 C N N 199 LEU CD2 C N N 200 LEU OXT O N N 201 LEU H H N N 202 LEU H2 H N N 203 LEU HA H N N 204 LEU HB2 H N N 205 LEU HB3 H N N 206 LEU HG H N N 207 LEU HD11 H N N 208 LEU HD12 H N N 209 LEU HD13 H N N 210 LEU HD21 H N N 211 LEU HD22 H N N 212 LEU HD23 H N N 213 LEU HXT H N N 214 LYS N N N N 215 LYS CA C N S 216 LYS C C N N 217 LYS O O N N 218 LYS CB C N N 219 LYS CG C N N 220 LYS CD C N N 221 LYS CE C N N 222 LYS NZ N N N 223 LYS OXT O N N 224 LYS H H N N 225 LYS H2 H N N 226 LYS HA H N N 227 LYS HB2 H N N 228 LYS HB3 H N N 229 LYS HG2 H N N 230 LYS HG3 H N N 231 LYS HD2 H N N 232 LYS HD3 H N N 233 LYS HE2 H N N 234 LYS HE3 H N N 235 LYS HZ1 H N N 236 LYS HZ2 H N N 237 LYS HZ3 H N N 238 LYS HXT H N N 239 MET N N N N 240 MET CA C N S 241 MET C C N N 242 MET O O N N 243 MET CB C N N 244 MET CG C N N 245 MET SD S N N 246 MET CE C N N 247 MET OXT O N N 248 MET H H N N 249 MET H2 H N N 250 MET HA H N N 251 MET HB2 H N N 252 MET HB3 H N N 253 MET HG2 H N N 254 MET HG3 H N N 255 MET HE1 H N N 256 MET HE2 H N N 257 MET HE3 H N N 258 MET HXT H N N 259 PHE N N N N 260 PHE CA C N S 261 PHE C C N N 262 PHE O O N N 263 PHE CB C N N 264 PHE CG C Y N 265 PHE CD1 C Y N 266 PHE CD2 C Y N 267 PHE CE1 C Y N 268 PHE CE2 C Y N 269 PHE CZ C Y N 270 PHE OXT O N N 271 PHE H H N N 272 PHE H2 H N N 273 PHE HA H N N 274 PHE HB2 H N N 275 PHE HB3 H N N 276 PHE HD1 H N N 277 PHE HD2 H N N 278 PHE HE1 H N N 279 PHE HE2 H N N 280 PHE HZ H N N 281 PHE HXT H N N 282 PRO N N N N 283 PRO CA C N S 284 PRO C C N N 285 PRO O O N N 286 PRO CB C N N 287 PRO CG C N N 288 PRO CD C N N 289 PRO OXT O N N 290 PRO H H N N 291 PRO HA H N N 292 PRO HB2 H N N 293 PRO HB3 H N N 294 PRO HG2 H N N 295 PRO HG3 H N N 296 PRO HD2 H N N 297 PRO HD3 H N N 298 PRO HXT H N N 299 RYP C01 C N N 300 RYP C03 C N N 301 RYP C04 C Y N 302 RYP C05 C Y N 303 RYP C06 C Y N 304 RYP C08 C Y N 305 RYP C09 C Y N 306 RYP N02 N N N 307 RYP N07 N Y N 308 RYP H1 H N N 309 RYP H2 H N N 310 RYP H3 H N N 311 RYP H4 H N N 312 RYP H5 H N N 313 RYP H6 H N N 314 RYP H7 H N N 315 RYP H8 H N N 316 RYP H9 H N N 317 RYP H10 H N N 318 SER N N N N 319 SER CA C N S 320 SER C C N N 321 SER O O N N 322 SER CB C N N 323 SER OG O N N 324 SER OXT O N N 325 SER H H N N 326 SER H2 H N N 327 SER HA H N N 328 SER HB2 H N N 329 SER HB3 H N N 330 SER HG H N N 331 SER HXT H N N 332 THR N N N N 333 THR CA C N S 334 THR C C N N 335 THR O O N N 336 THR CB C N R 337 THR OG1 O N N 338 THR CG2 C N N 339 THR OXT O N N 340 THR H H N N 341 THR H2 H N N 342 THR HA H N N 343 THR HB H N N 344 THR HG1 H N N 345 THR HG21 H N N 346 THR HG22 H N N 347 THR HG23 H N N 348 THR HXT H N N 349 TRP N N N N 350 TRP CA C N S 351 TRP C C N N 352 TRP O O N N 353 TRP CB C N N 354 TRP CG C Y N 355 TRP CD1 C Y N 356 TRP CD2 C Y N 357 TRP NE1 N Y N 358 TRP CE2 C Y N 359 TRP CE3 C Y N 360 TRP CZ2 C Y N 361 TRP CZ3 C Y N 362 TRP CH2 C Y N 363 TRP OXT O N N 364 TRP H H N N 365 TRP H2 H N N 366 TRP HA H N N 367 TRP HB2 H N N 368 TRP HB3 H N N 369 TRP HD1 H N N 370 TRP HE1 H N N 371 TRP HE3 H N N 372 TRP HZ2 H N N 373 TRP HZ3 H N N 374 TRP HH2 H N N 375 TRP HXT H N N 376 TYR N N N N 377 TYR CA C N S 378 TYR C C N N 379 TYR O O N N 380 TYR CB C N N 381 TYR CG C Y N 382 TYR CD1 C Y N 383 TYR CD2 C Y N 384 TYR CE1 C Y N 385 TYR CE2 C Y N 386 TYR CZ C Y N 387 TYR OH O N N 388 TYR OXT O N N 389 TYR H H N N 390 TYR H2 H N N 391 TYR HA H N N 392 TYR HB2 H N N 393 TYR HB3 H N N 394 TYR HD1 H N N 395 TYR HD2 H N N 396 TYR HE1 H N N 397 TYR HE2 H N N 398 TYR HH H N N 399 TYR HXT H N N 400 VAL N N N N 401 VAL CA C N S 402 VAL C C N N 403 VAL O O N N 404 VAL CB C N N 405 VAL CG1 C N N 406 VAL CG2 C N N 407 VAL OXT O N N 408 VAL H H N N 409 VAL H2 H N N 410 VAL HA H N N 411 VAL HB H N N 412 VAL HG11 H N N 413 VAL HG12 H N N 414 VAL HG13 H N N 415 VAL HG21 H N N 416 VAL HG22 H N N 417 VAL HG23 H N N 418 VAL HXT H N N 419 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DMS S O doub N N 83 DMS S C1 sing N N 84 DMS S C2 sing N N 85 DMS C1 H11 sing N N 86 DMS C1 H12 sing N N 87 DMS C1 H13 sing N N 88 DMS C2 H21 sing N N 89 DMS C2 H22 sing N N 90 DMS C2 H23 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 ILE N CA sing N N 161 ILE N H sing N N 162 ILE N H2 sing N N 163 ILE CA C sing N N 164 ILE CA CB sing N N 165 ILE CA HA sing N N 166 ILE C O doub N N 167 ILE C OXT sing N N 168 ILE CB CG1 sing N N 169 ILE CB CG2 sing N N 170 ILE CB HB sing N N 171 ILE CG1 CD1 sing N N 172 ILE CG1 HG12 sing N N 173 ILE CG1 HG13 sing N N 174 ILE CG2 HG21 sing N N 175 ILE CG2 HG22 sing N N 176 ILE CG2 HG23 sing N N 177 ILE CD1 HD11 sing N N 178 ILE CD1 HD12 sing N N 179 ILE CD1 HD13 sing N N 180 ILE OXT HXT sing N N 181 LEU N CA sing N N 182 LEU N H sing N N 183 LEU N H2 sing N N 184 LEU CA C sing N N 185 LEU CA CB sing N N 186 LEU CA HA sing N N 187 LEU C O doub N N 188 LEU C OXT sing N N 189 LEU CB CG sing N N 190 LEU CB HB2 sing N N 191 LEU CB HB3 sing N N 192 LEU CG CD1 sing N N 193 LEU CG CD2 sing N N 194 LEU CG HG sing N N 195 LEU CD1 HD11 sing N N 196 LEU CD1 HD12 sing N N 197 LEU CD1 HD13 sing N N 198 LEU CD2 HD21 sing N N 199 LEU CD2 HD22 sing N N 200 LEU CD2 HD23 sing N N 201 LEU OXT HXT sing N N 202 LYS N CA sing N N 203 LYS N H sing N N 204 LYS N H2 sing N N 205 LYS CA C sing N N 206 LYS CA CB sing N N 207 LYS CA HA sing N N 208 LYS C O doub N N 209 LYS C OXT sing N N 210 LYS CB CG sing N N 211 LYS CB HB2 sing N N 212 LYS CB HB3 sing N N 213 LYS CG CD sing N N 214 LYS CG HG2 sing N N 215 LYS CG HG3 sing N N 216 LYS CD CE sing N N 217 LYS CD HD2 sing N N 218 LYS CD HD3 sing N N 219 LYS CE NZ sing N N 220 LYS CE HE2 sing N N 221 LYS CE HE3 sing N N 222 LYS NZ HZ1 sing N N 223 LYS NZ HZ2 sing N N 224 LYS NZ HZ3 sing N N 225 LYS OXT HXT sing N N 226 MET N CA sing N N 227 MET N H sing N N 228 MET N H2 sing N N 229 MET CA C sing N N 230 MET CA CB sing N N 231 MET CA HA sing N N 232 MET C O doub N N 233 MET C OXT sing N N 234 MET CB CG sing N N 235 MET CB HB2 sing N N 236 MET CB HB3 sing N N 237 MET CG SD sing N N 238 MET CG HG2 sing N N 239 MET CG HG3 sing N N 240 MET SD CE sing N N 241 MET CE HE1 sing N N 242 MET CE HE2 sing N N 243 MET CE HE3 sing N N 244 MET OXT HXT sing N N 245 PHE N CA sing N N 246 PHE N H sing N N 247 PHE N H2 sing N N 248 PHE CA C sing N N 249 PHE CA CB sing N N 250 PHE CA HA sing N N 251 PHE C O doub N N 252 PHE C OXT sing N N 253 PHE CB CG sing N N 254 PHE CB HB2 sing N N 255 PHE CB HB3 sing N N 256 PHE CG CD1 doub Y N 257 PHE CG CD2 sing Y N 258 PHE CD1 CE1 sing Y N 259 PHE CD1 HD1 sing N N 260 PHE CD2 CE2 doub Y N 261 PHE CD2 HD2 sing N N 262 PHE CE1 CZ doub Y N 263 PHE CE1 HE1 sing N N 264 PHE CE2 CZ sing Y N 265 PHE CE2 HE2 sing N N 266 PHE CZ HZ sing N N 267 PHE OXT HXT sing N N 268 PRO N CA sing N N 269 PRO N CD sing N N 270 PRO N H sing N N 271 PRO CA C sing N N 272 PRO CA CB sing N N 273 PRO CA HA sing N N 274 PRO C O doub N N 275 PRO C OXT sing N N 276 PRO CB CG sing N N 277 PRO CB HB2 sing N N 278 PRO CB HB3 sing N N 279 PRO CG CD sing N N 280 PRO CG HG2 sing N N 281 PRO CG HG3 sing N N 282 PRO CD HD2 sing N N 283 PRO CD HD3 sing N N 284 PRO OXT HXT sing N N 285 RYP C01 N02 sing N N 286 RYP N02 C03 sing N N 287 RYP C03 C04 sing N N 288 RYP C04 C09 doub Y N 289 RYP C04 C05 sing Y N 290 RYP C09 C08 sing Y N 291 RYP C05 C06 doub Y N 292 RYP C08 N07 doub Y N 293 RYP C06 N07 sing Y N 294 RYP C01 H1 sing N N 295 RYP C01 H2 sing N N 296 RYP C01 H3 sing N N 297 RYP C03 H4 sing N N 298 RYP C03 H5 sing N N 299 RYP C05 H6 sing N N 300 RYP C06 H7 sing N N 301 RYP C08 H8 sing N N 302 RYP C09 H9 sing N N 303 RYP N02 H10 sing N N 304 SER N CA sing N N 305 SER N H sing N N 306 SER N H2 sing N N 307 SER CA C sing N N 308 SER CA CB sing N N 309 SER CA HA sing N N 310 SER C O doub N N 311 SER C OXT sing N N 312 SER CB OG sing N N 313 SER CB HB2 sing N N 314 SER CB HB3 sing N N 315 SER OG HG sing N N 316 SER OXT HXT sing N N 317 THR N CA sing N N 318 THR N H sing N N 319 THR N H2 sing N N 320 THR CA C sing N N 321 THR CA CB sing N N 322 THR CA HA sing N N 323 THR C O doub N N 324 THR C OXT sing N N 325 THR CB OG1 sing N N 326 THR CB CG2 sing N N 327 THR CB HB sing N N 328 THR OG1 HG1 sing N N 329 THR CG2 HG21 sing N N 330 THR CG2 HG22 sing N N 331 THR CG2 HG23 sing N N 332 THR OXT HXT sing N N 333 TRP N CA sing N N 334 TRP N H sing N N 335 TRP N H2 sing N N 336 TRP CA C sing N N 337 TRP CA CB sing N N 338 TRP CA HA sing N N 339 TRP C O doub N N 340 TRP C OXT sing N N 341 TRP CB CG sing N N 342 TRP CB HB2 sing N N 343 TRP CB HB3 sing N N 344 TRP CG CD1 doub Y N 345 TRP CG CD2 sing Y N 346 TRP CD1 NE1 sing Y N 347 TRP CD1 HD1 sing N N 348 TRP CD2 CE2 doub Y N 349 TRP CD2 CE3 sing Y N 350 TRP NE1 CE2 sing Y N 351 TRP NE1 HE1 sing N N 352 TRP CE2 CZ2 sing Y N 353 TRP CE3 CZ3 doub Y N 354 TRP CE3 HE3 sing N N 355 TRP CZ2 CH2 doub Y N 356 TRP CZ2 HZ2 sing N N 357 TRP CZ3 CH2 sing Y N 358 TRP CZ3 HZ3 sing N N 359 TRP CH2 HH2 sing N N 360 TRP OXT HXT sing N N 361 TYR N CA sing N N 362 TYR N H sing N N 363 TYR N H2 sing N N 364 TYR CA C sing N N 365 TYR CA CB sing N N 366 TYR CA HA sing N N 367 TYR C O doub N N 368 TYR C OXT sing N N 369 TYR CB CG sing N N 370 TYR CB HB2 sing N N 371 TYR CB HB3 sing N N 372 TYR CG CD1 doub Y N 373 TYR CG CD2 sing Y N 374 TYR CD1 CE1 sing Y N 375 TYR CD1 HD1 sing N N 376 TYR CD2 CE2 doub Y N 377 TYR CD2 HD2 sing N N 378 TYR CE1 CZ doub Y N 379 TYR CE1 HE1 sing N N 380 TYR CE2 CZ sing Y N 381 TYR CE2 HE2 sing N N 382 TYR CZ OH sing N N 383 TYR OH HH sing N N 384 TYR OXT HXT sing N N 385 VAL N CA sing N N 386 VAL N H sing N N 387 VAL N H2 sing N N 388 VAL CA C sing N N 389 VAL CA CB sing N N 390 VAL CA HA sing N N 391 VAL C O doub N N 392 VAL C OXT sing N N 393 VAL CB CG1 sing N N 394 VAL CB CG2 sing N N 395 VAL CB HB sing N N 396 VAL CG1 HG11 sing N N 397 VAL CG1 HG12 sing N N 398 VAL CG1 HG13 sing N N 399 VAL CG2 HG21 sing N N 400 VAL CG2 HG22 sing N N 401 VAL CG2 HG23 sing N N 402 VAL OXT HXT sing N N 403 # _pdbx_deposit_group.group_id G_1002128 _pdbx_deposit_group.group_description ;human NUDT22 screened against the DSPL fragment library by X-ray Crystallography at the XChem facility of Diamond Light Source beamline I04-1 ; _pdbx_deposit_group.group_title 'PanDDA analysis group deposition' _pdbx_deposit_group.group_type 'changed state' # _atom_sites.entry_id 5R55 _atom_sites.fract_transf_matrix[1][1] 0.020113 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019095 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009815 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_