data_5R5Y # _entry.id 5R5Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.334 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5R5Y WWPDB D_1001402811 # _pdbx_database_status.entry_id 5R5Y _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.recvd_initial_deposition_date 2020-02-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Coker, J.A.' 1 'Bezerra, G.A.' 2 'von Delft, F.' 3 'Arrowsmith, C.H.' 4 'Bountra, C.' 5 'Edwards, A.M.' 6 'Yue, W.W.' 7 'Marsden, B.D.' 8 # _citation.id primary _citation.title 'PanDDA analysis group deposition' _citation.journal_abbrev 'To Be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.identifier_ORCID _citation_author.ordinal primary 'Coker, J.A.' ? 1 primary 'Bezerra, G.A.' ? 2 primary 'von Delft, F.' ? 3 primary 'Arrowsmith, C.H.' ? 4 primary 'Bountra, C.' ? 5 primary 'Edwards, A.M.' ? 6 primary 'Yue, W.W.' ? 7 primary 'Marsden, B.D.' ? 8 # _cell.entry_id 5R5Y _cell.length_a 77.220 _cell.length_b 77.220 _cell.length_c 71.620 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5R5Y _symmetry.Int_Tables_number 92 _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Tenascin C (Hexabrachion), isoform CRA_a' 25183.938 1 ? ? ? ? 2 non-polymer syn 'N-[(4-cyanophenyl)methyl]morpholine-4-carboxamide' 245.277 1 ? ? ? ? 3 water nat water 18.015 173 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMPFPKDCSQAMLNGDTTSGLYTIYLNGDKAQALEVFCDMTSDGGGWIVFLRRKNGRENFYQNWKAYAAGFGDRREEFWL GLDNLNKITAQGQYELRVDLRDHGETAFAVYDKFSVGDAKTRYKLKVEGYSGTAGDSMAYHNGRSFSTFDKDTDSAITNC ALSYKGAFWYRNCHRVNLMGRYGDNNHSQGVNWFHWKGHEHSIQFAEMKLRPSNFRNLEG ; _entity_poly.pdbx_seq_one_letter_code_can ;SMPFPKDCSQAMLNGDTTSGLYTIYLNGDKAQALEVFCDMTSDGGGWIVFLRRKNGRENFYQNWKAYAAGFGDRREEFWL GLDNLNKITAQGQYELRVDLRDHGETAFAVYDKFSVGDAKTRYKLKVEGYSGTAGDSMAYHNGRSFSTFDKDTDSAITNC ALSYKGAFWYRNCHRVNLMGRYGDNNHSQGVNWFHWKGHEHSIQFAEMKLRPSNFRNLEG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 PRO n 1 4 PHE n 1 5 PRO n 1 6 LYS n 1 7 ASP n 1 8 CYS n 1 9 SER n 1 10 GLN n 1 11 ALA n 1 12 MET n 1 13 LEU n 1 14 ASN n 1 15 GLY n 1 16 ASP n 1 17 THR n 1 18 THR n 1 19 SER n 1 20 GLY n 1 21 LEU n 1 22 TYR n 1 23 THR n 1 24 ILE n 1 25 TYR n 1 26 LEU n 1 27 ASN n 1 28 GLY n 1 29 ASP n 1 30 LYS n 1 31 ALA n 1 32 GLN n 1 33 ALA n 1 34 LEU n 1 35 GLU n 1 36 VAL n 1 37 PHE n 1 38 CYS n 1 39 ASP n 1 40 MET n 1 41 THR n 1 42 SER n 1 43 ASP n 1 44 GLY n 1 45 GLY n 1 46 GLY n 1 47 TRP n 1 48 ILE n 1 49 VAL n 1 50 PHE n 1 51 LEU n 1 52 ARG n 1 53 ARG n 1 54 LYS n 1 55 ASN n 1 56 GLY n 1 57 ARG n 1 58 GLU n 1 59 ASN n 1 60 PHE n 1 61 TYR n 1 62 GLN n 1 63 ASN n 1 64 TRP n 1 65 LYS n 1 66 ALA n 1 67 TYR n 1 68 ALA n 1 69 ALA n 1 70 GLY n 1 71 PHE n 1 72 GLY n 1 73 ASP n 1 74 ARG n 1 75 ARG n 1 76 GLU n 1 77 GLU n 1 78 PHE n 1 79 TRP n 1 80 LEU n 1 81 GLY n 1 82 LEU n 1 83 ASP n 1 84 ASN n 1 85 LEU n 1 86 ASN n 1 87 LYS n 1 88 ILE n 1 89 THR n 1 90 ALA n 1 91 GLN n 1 92 GLY n 1 93 GLN n 1 94 TYR n 1 95 GLU n 1 96 LEU n 1 97 ARG n 1 98 VAL n 1 99 ASP n 1 100 LEU n 1 101 ARG n 1 102 ASP n 1 103 HIS n 1 104 GLY n 1 105 GLU n 1 106 THR n 1 107 ALA n 1 108 PHE n 1 109 ALA n 1 110 VAL n 1 111 TYR n 1 112 ASP n 1 113 LYS n 1 114 PHE n 1 115 SER n 1 116 VAL n 1 117 GLY n 1 118 ASP n 1 119 ALA n 1 120 LYS n 1 121 THR n 1 122 ARG n 1 123 TYR n 1 124 LYS n 1 125 LEU n 1 126 LYS n 1 127 VAL n 1 128 GLU n 1 129 GLY n 1 130 TYR n 1 131 SER n 1 132 GLY n 1 133 THR n 1 134 ALA n 1 135 GLY n 1 136 ASP n 1 137 SER n 1 138 MET n 1 139 ALA n 1 140 TYR n 1 141 HIS n 1 142 ASN n 1 143 GLY n 1 144 ARG n 1 145 SER n 1 146 PHE n 1 147 SER n 1 148 THR n 1 149 PHE n 1 150 ASP n 1 151 LYS n 1 152 ASP n 1 153 THR n 1 154 ASP n 1 155 SER n 1 156 ALA n 1 157 ILE n 1 158 THR n 1 159 ASN n 1 160 CYS n 1 161 ALA n 1 162 LEU n 1 163 SER n 1 164 TYR n 1 165 LYS n 1 166 GLY n 1 167 ALA n 1 168 PHE n 1 169 TRP n 1 170 TYR n 1 171 ARG n 1 172 ASN n 1 173 CYS n 1 174 HIS n 1 175 ARG n 1 176 VAL n 1 177 ASN n 1 178 LEU n 1 179 MET n 1 180 GLY n 1 181 ARG n 1 182 TYR n 1 183 GLY n 1 184 ASP n 1 185 ASN n 1 186 ASN n 1 187 HIS n 1 188 SER n 1 189 GLN n 1 190 GLY n 1 191 VAL n 1 192 ASN n 1 193 TRP n 1 194 PHE n 1 195 HIS n 1 196 TRP n 1 197 LYS n 1 198 GLY n 1 199 HIS n 1 200 GLU n 1 201 HIS n 1 202 SER n 1 203 ILE n 1 204 GLN n 1 205 PHE n 1 206 ALA n 1 207 GLU n 1 208 MET n 1 209 LYS n 1 210 LEU n 1 211 ARG n 1 212 PRO n 1 213 SER n 1 214 ASN n 1 215 PHE n 1 216 ARG n 1 217 ASN n 1 218 LEU n 1 219 GLU n 1 220 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 220 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'TNC, hCG_29852' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A024R884_HUMAN _struct_ref.pdbx_db_accession A0A024R884 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PFPKDCSQAMLNGDTTSGLYTIYLNGDKAQALEVFCDMTSDGGGWIVFLRRKNGRENFYQNWKAYAAGFGDRREEFWLGL DNLNKITAQGQYELRVDLRDHGETAFAVYDKFSVGDAKTRYKLKVEGYSGTAGDSMAYHNGRSFSTFDKDTDSAITNCAL SYKGAFWYRNCHRVNLMGRYGDNNHSQGVNWFHWKGHEHSIQFAEMKLRPSNFRNLEG ; _struct_ref.pdbx_align_begin 1979 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5R5Y _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 220 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0A024R884 _struct_ref_seq.db_align_beg 1979 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 2196 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1979 _struct_ref_seq.pdbx_auth_seq_align_end 2196 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5R5Y SER A 1 ? UNP A0A024R884 ? ? 'expression tag' -1 1 1 5R5Y MET A 2 ? UNP A0A024R884 ? ? 'expression tag' 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 JGG non-polymer . 'N-[(4-cyanophenyl)methyl]morpholine-4-carboxamide' ? 'C13 H15 N3 O2' 245.277 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 5R5Y _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity 0.000 _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.12 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 41.97 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details 'MORPHEUS 0.09M NPS, 0.1M BUFFER SYSTEM 3 PH = 8.5, 50% V/V PRECIPITANT MIX 1' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.crystal_id 1 _diffrn.ambient_temp_details ? # _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2019-05-20 _diffrn_detector.diffrn_id 1 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91587 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I04-1' _diffrn_source.pdbx_wavelength_list 0.91587 _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I04-1 _diffrn_source.pdbx_wavelength ? # _reflns.entry_id 5R5Y _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 54.600 _reflns.d_resolution_high 1.570 _reflns.number_obs 30855 _reflns.number_all ? _reflns.percent_possible_obs 99.900 _reflns.pdbx_Rmerge_I_obs 0.106 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.200 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 12.000 _reflns.pdbx_Rrim_I_all 0.111 _reflns.pdbx_Rpim_I_all 0.032 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_number_measured_all 371477 _reflns.pdbx_scaling_rejects 3 _reflns.pdbx_chi_squared ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.details ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_CC_half 1 1 1.570 1.610 ? 20799 ? ? 2.008 ? ? ? 9.300 ? 1.100 ? 2236 ? ? ? ? 99.800 2.126 0.693 0.603 1 2 7.020 54.600 ? 4487 ? ? 0.056 ? ? ? 10.500 ? 38.300 ? 426 ? ? ? ? 100.000 0.059 0.017 0.999 # _refine.entry_id 5R5Y _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 1.5700 _refine.ls_d_res_low 54.6000 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.8200 _refine.ls_number_reflns_obs 29371 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1755 _refine.ls_R_factor_R_work 0.1739 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2096 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.6000 _refine.ls_number_reflns_R_free 1430 _refine.ls_number_reflns_R_work ? _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 23.2850 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 1.0000 _refine.aniso_B[2][2] 1.0000 _refine.aniso_B[3][3] -2.0100 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] -0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9690 _refine.correlation_coeff_Fo_to_Fc_free 0.9570 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.0810 _refine.pdbx_overall_ESU_R_Free 0.0850 _refine.overall_SU_ML 0.0620 _refine.overall_SU_B 1.8600 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 6QNV _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 101.160 _refine.B_iso_min 15.320 _refine.pdbx_overall_phase_error ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_R_factor_R_free_error_details ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.5700 _refine_hist.d_res_low 54.6000 _refine_hist.pdbx_number_atoms_ligand 18 _refine_hist.number_atoms_solvent 173 _refine_hist.number_atoms_total 1868 _refine_hist.pdbx_number_residues_total 211 _refine_hist.pdbx_B_iso_mean_ligand 36.14 _refine_hist.pdbx_B_iso_mean_solvent 38.59 _refine_hist.pdbx_number_atoms_protein 1677 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' r_bond_refined_d 1755 0.012 0.013 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1478 0.001 0.017 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2365 1.796 1.653 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 3413 1.571 1.598 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 210 7.176 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 106 30.104 22.170 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 261 12.350 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 11 16.472 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 203 0.094 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2069 0.011 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 436 0.002 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 848 1.879 2.303 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 847 1.875 2.302 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1055 2.701 3.443 ? ? # _refine_ls_shell.d_res_high 1.5700 _refine_ls_shell.d_res_low 1.6110 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.7800 _refine_ls_shell.number_reflns_R_work 2113 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.3030 _refine_ls_shell.R_factor_R_free 0.3020 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 116 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2229 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 5R5Y _struct.title ;PanDDA analysis group deposition -- Crystal Structure of FIBRINOGEN-LIKE GLOBE DOMAIN OF HUMAN TENASCIN-C in complex with Z509756472 ; _struct.pdbx_descriptor 'Tenascin C (Hexabrachion), isoform CRA_a' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5R5Y _struct_keywords.text ;SGC - Diamond I04-1 fragment screening, PanDDA, XChemExplorer, FIBRINOGEN-RELATED PROTEIN (FREP), PRO-INFLAMMATORY, DAMAGE-ASSOCIATED MOLECULAR PATTERN (DAMP), IMMUNE SYSTEM ; _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 7 ? ASN A 14 ? ASP A 1983 ASN A 1990 1 ? 8 HELX_P HELX_P2 AA2 ASN A 27 ? ASP A 29 ? ASN A 2003 ASP A 2005 5 ? 3 HELX_P HELX_P3 AA3 THR A 41 ? GLY A 45 ? THR A 2017 GLY A 2021 5 ? 5 HELX_P HELX_P4 AA4 ASN A 63 ? GLY A 70 ? ASN A 2039 GLY A 2046 1 ? 8 HELX_P HELX_P5 AA5 GLY A 81 ? ALA A 90 ? GLY A 2057 ALA A 2066 1 ? 10 HELX_P HELX_P6 AA6 ASP A 118 ? ARG A 122 ? ASP A 2094 ARG A 2098 5 ? 5 HELX_P HELX_P7 AA7 MET A 138 ? ASN A 142 ? MET A 2114 ASN A 2118 5 ? 5 HELX_P HELX_P8 AA8 CYS A 160 ? LYS A 165 ? CYS A 2136 LYS A 2141 1 ? 6 HELX_P HELX_P9 AA9 PHE A 194 ? GLY A 198 ? PHE A 2170 GLY A 2174 1 ? 5 HELX_P HELX_P10 AB1 ASN A 214 ? LEU A 218 ? ASN A 2190 LEU A 2194 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 8 SG ? ? ? 1_555 A CYS 38 SG ? ? A CYS 1984 A CYS 2014 1_555 ? ? ? ? ? ? ? 2.021 ? ? disulf2 disulf ? ? A CYS 160 SG ? ? ? 1_555 A CYS 173 SG ? ? A CYS 2136 A CYS 2149 1_555 ? ? ? ? ? ? ? 2.079 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASN _struct_mon_prot_cis.label_seq_id 172 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASN _struct_mon_prot_cis.auth_seq_id 2148 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 CYS _struct_mon_prot_cis.pdbx_label_seq_id_2 173 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 CYS _struct_mon_prot_cis.pdbx_auth_seq_id_2 2149 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 4.72 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 7 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLY A 20 ? TYR A 25 ? GLY A 1996 TYR A 2001 AA1 2 ALA A 33 ? ASP A 39 ? ALA A 2009 ASP A 2015 AA1 3 TRP A 47 ? ARG A 53 ? TRP A 2023 ARG A 2029 AA1 4 PHE A 78 ? TRP A 79 ? PHE A 2054 TRP A 2055 AA1 5 PHE A 71 ? GLY A 72 ? PHE A 2047 GLY A 2048 AA2 1 GLY A 20 ? TYR A 25 ? GLY A 1996 TYR A 2001 AA2 2 ALA A 33 ? ASP A 39 ? ALA A 2009 ASP A 2015 AA2 3 TRP A 47 ? ARG A 53 ? TRP A 2023 ARG A 2029 AA2 4 PHE A 205 ? PRO A 212 ? PHE A 2181 PRO A 2188 AA2 5 TYR A 94 ? ASP A 102 ? TYR A 2070 ASP A 2078 AA2 6 GLU A 105 ? VAL A 116 ? GLU A 2081 VAL A 2092 AA2 7 LEU A 125 ? GLY A 132 ? LEU A 2101 GLY A 2108 AA3 1 VAL A 176 ? ASN A 177 ? VAL A 2152 ASN A 2153 AA3 2 ASN A 192 ? TRP A 193 ? ASN A 2168 TRP A 2169 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLY A 20 ? N GLY A 1996 O CYS A 38 ? O CYS A 2014 AA1 2 3 N PHE A 37 ? N PHE A 2013 O VAL A 49 ? O VAL A 2025 AA1 3 4 N ARG A 52 ? N ARG A 2028 O PHE A 78 ? O PHE A 2054 AA1 4 5 O TRP A 79 ? O TRP A 2055 N PHE A 71 ? N PHE A 2047 AA2 1 2 N GLY A 20 ? N GLY A 1996 O CYS A 38 ? O CYS A 2014 AA2 2 3 N PHE A 37 ? N PHE A 2013 O VAL A 49 ? O VAL A 2025 AA2 3 4 N PHE A 50 ? N PHE A 2026 O MET A 208 ? O MET A 2184 AA2 4 5 O ARG A 211 ? O ARG A 2187 N GLU A 95 ? N GLU A 2071 AA2 5 6 N VAL A 98 ? N VAL A 2074 O ALA A 109 ? O ALA A 2085 AA2 6 7 N VAL A 110 ? N VAL A 2086 O SER A 131 ? O SER A 2107 AA3 1 2 N ASN A 177 ? N ASN A 2153 O ASN A 192 ? O ASN A 2168 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id JGG _struct_site.pdbx_auth_seq_id 2401 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 10 _struct_site.details 'binding site for residue JGG A 2401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 GLY A 70 ? GLY A 2046 . ? 1_555 ? 2 AC1 10 PHE A 71 ? PHE A 2047 . ? 1_555 ? 3 AC1 10 GLY A 72 ? GLY A 2048 . ? 1_555 ? 4 AC1 10 ARG A 74 ? ARG A 2050 . ? 1_555 ? 5 AC1 10 PHE A 78 ? PHE A 2054 . ? 1_555 ? 6 AC1 10 TRP A 79 ? TRP A 2055 . ? 1_555 ? 7 AC1 10 LEU A 80 ? LEU A 2056 . ? 1_555 ? 8 AC1 10 HOH C . ? HOH A 2504 . ? 1_555 ? 9 AC1 10 HOH C . ? HOH A 2571 . ? 1_555 ? 10 AC1 10 HOH C . ? HOH A 2589 . ? 1_555 ? # _atom_sites.entry_id 5R5Y _atom_sites.fract_transf_matrix[1][1] 0.012950 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012950 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013963 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -1 -1 SER SER A . n A 1 2 MET 2 0 0 MET MET A . n A 1 3 PRO 3 1979 1979 PRO PRO A . n A 1 4 PHE 4 1980 1980 PHE PHE A . n A 1 5 PRO 5 1981 1981 PRO PRO A . n A 1 6 LYS 6 1982 1982 LYS LYS A . n A 1 7 ASP 7 1983 1983 ASP ASP A . n A 1 8 CYS 8 1984 1984 CYS CYS A . n A 1 9 SER 9 1985 1985 SER SER A . n A 1 10 GLN 10 1986 1986 GLN GLN A . n A 1 11 ALA 11 1987 1987 ALA ALA A . n A 1 12 MET 12 1988 1988 MET MET A . n A 1 13 LEU 13 1989 1989 LEU LEU A . n A 1 14 ASN 14 1990 1990 ASN ASN A . n A 1 15 GLY 15 1991 1991 GLY GLY A . n A 1 16 ASP 16 1992 1992 ASP ASP A . n A 1 17 THR 17 1993 1993 THR THR A . n A 1 18 THR 18 1994 1994 THR THR A . n A 1 19 SER 19 1995 1995 SER SER A . n A 1 20 GLY 20 1996 1996 GLY GLY A . n A 1 21 LEU 21 1997 1997 LEU LEU A . n A 1 22 TYR 22 1998 1998 TYR TYR A . n A 1 23 THR 23 1999 1999 THR THR A . n A 1 24 ILE 24 2000 2000 ILE ILE A . n A 1 25 TYR 25 2001 2001 TYR TYR A . n A 1 26 LEU 26 2002 2002 LEU LEU A . n A 1 27 ASN 27 2003 2003 ASN ASN A . n A 1 28 GLY 28 2004 2004 GLY GLY A . n A 1 29 ASP 29 2005 2005 ASP ASP A . n A 1 30 LYS 30 2006 2006 LYS LYS A . n A 1 31 ALA 31 2007 2007 ALA ALA A . n A 1 32 GLN 32 2008 2008 GLN GLN A . n A 1 33 ALA 33 2009 2009 ALA ALA A . n A 1 34 LEU 34 2010 2010 LEU LEU A . n A 1 35 GLU 35 2011 2011 GLU GLU A . n A 1 36 VAL 36 2012 2012 VAL VAL A . n A 1 37 PHE 37 2013 2013 PHE PHE A . n A 1 38 CYS 38 2014 2014 CYS CYS A . n A 1 39 ASP 39 2015 2015 ASP ASP A . n A 1 40 MET 40 2016 2016 MET MET A . n A 1 41 THR 41 2017 2017 THR THR A . n A 1 42 SER 42 2018 2018 SER SER A . n A 1 43 ASP 43 2019 2019 ASP ASP A . n A 1 44 GLY 44 2020 2020 GLY GLY A . n A 1 45 GLY 45 2021 2021 GLY GLY A . n A 1 46 GLY 46 2022 2022 GLY GLY A . n A 1 47 TRP 47 2023 2023 TRP TRP A . n A 1 48 ILE 48 2024 2024 ILE ILE A . n A 1 49 VAL 49 2025 2025 VAL VAL A . n A 1 50 PHE 50 2026 2026 PHE PHE A . n A 1 51 LEU 51 2027 2027 LEU LEU A . n A 1 52 ARG 52 2028 2028 ARG ARG A . n A 1 53 ARG 53 2029 2029 ARG ARG A . n A 1 54 LYS 54 2030 2030 LYS LYS A . n A 1 55 ASN 55 2031 2031 ASN ASN A . n A 1 56 GLY 56 2032 2032 GLY GLY A . n A 1 57 ARG 57 2033 2033 ARG ARG A . n A 1 58 GLU 58 2034 2034 GLU GLU A . n A 1 59 ASN 59 2035 2035 ASN ASN A . n A 1 60 PHE 60 2036 2036 PHE PHE A . n A 1 61 TYR 61 2037 2037 TYR TYR A . n A 1 62 GLN 62 2038 2038 GLN GLN A . n A 1 63 ASN 63 2039 2039 ASN ASN A . n A 1 64 TRP 64 2040 2040 TRP TRP A . n A 1 65 LYS 65 2041 2041 LYS LYS A . n A 1 66 ALA 66 2042 2042 ALA ALA A . n A 1 67 TYR 67 2043 2043 TYR TYR A . n A 1 68 ALA 68 2044 2044 ALA ALA A . n A 1 69 ALA 69 2045 2045 ALA ALA A . n A 1 70 GLY 70 2046 2046 GLY GLY A . n A 1 71 PHE 71 2047 2047 PHE PHE A . n A 1 72 GLY 72 2048 2048 GLY GLY A . n A 1 73 ASP 73 2049 2049 ASP ASP A . n A 1 74 ARG 74 2050 2050 ARG ARG A . n A 1 75 ARG 75 2051 2051 ARG ARG A . n A 1 76 GLU 76 2052 2052 GLU GLU A . n A 1 77 GLU 77 2053 2053 GLU GLU A . n A 1 78 PHE 78 2054 2054 PHE PHE A . n A 1 79 TRP 79 2055 2055 TRP TRP A . n A 1 80 LEU 80 2056 2056 LEU LEU A . n A 1 81 GLY 81 2057 2057 GLY GLY A . n A 1 82 LEU 82 2058 2058 LEU LEU A . n A 1 83 ASP 83 2059 2059 ASP ASP A . n A 1 84 ASN 84 2060 2060 ASN ASN A . n A 1 85 LEU 85 2061 2061 LEU LEU A . n A 1 86 ASN 86 2062 2062 ASN ASN A . n A 1 87 LYS 87 2063 2063 LYS LYS A . n A 1 88 ILE 88 2064 2064 ILE ILE A . n A 1 89 THR 89 2065 2065 THR THR A . n A 1 90 ALA 90 2066 2066 ALA ALA A . n A 1 91 GLN 91 2067 2067 GLN GLN A . n A 1 92 GLY 92 2068 2068 GLY GLY A . n A 1 93 GLN 93 2069 2069 GLN GLN A . n A 1 94 TYR 94 2070 2070 TYR TYR A . n A 1 95 GLU 95 2071 2071 GLU GLU A . n A 1 96 LEU 96 2072 2072 LEU LEU A . n A 1 97 ARG 97 2073 2073 ARG ARG A . n A 1 98 VAL 98 2074 2074 VAL VAL A . n A 1 99 ASP 99 2075 2075 ASP ASP A . n A 1 100 LEU 100 2076 2076 LEU LEU A . n A 1 101 ARG 101 2077 2077 ARG ARG A . n A 1 102 ASP 102 2078 2078 ASP ASP A . n A 1 103 HIS 103 2079 2079 HIS HIS A . n A 1 104 GLY 104 2080 2080 GLY GLY A . n A 1 105 GLU 105 2081 2081 GLU GLU A . n A 1 106 THR 106 2082 2082 THR THR A . n A 1 107 ALA 107 2083 2083 ALA ALA A . n A 1 108 PHE 108 2084 2084 PHE PHE A . n A 1 109 ALA 109 2085 2085 ALA ALA A . n A 1 110 VAL 110 2086 2086 VAL VAL A . n A 1 111 TYR 111 2087 2087 TYR TYR A . n A 1 112 ASP 112 2088 2088 ASP ASP A . n A 1 113 LYS 113 2089 2089 LYS LYS A . n A 1 114 PHE 114 2090 2090 PHE PHE A . n A 1 115 SER 115 2091 2091 SER SER A . n A 1 116 VAL 116 2092 2092 VAL VAL A . n A 1 117 GLY 117 2093 2093 GLY GLY A . n A 1 118 ASP 118 2094 2094 ASP ASP A . n A 1 119 ALA 119 2095 2095 ALA ALA A . n A 1 120 LYS 120 2096 2096 LYS LYS A . n A 1 121 THR 121 2097 2097 THR THR A . n A 1 122 ARG 122 2098 2098 ARG ARG A . n A 1 123 TYR 123 2099 2099 TYR TYR A . n A 1 124 LYS 124 2100 2100 LYS LYS A . n A 1 125 LEU 125 2101 2101 LEU LEU A . n A 1 126 LYS 126 2102 2102 LYS LYS A . n A 1 127 VAL 127 2103 2103 VAL VAL A . n A 1 128 GLU 128 2104 2104 GLU GLU A . n A 1 129 GLY 129 2105 2105 GLY GLY A . n A 1 130 TYR 130 2106 2106 TYR TYR A . n A 1 131 SER 131 2107 2107 SER SER A . n A 1 132 GLY 132 2108 2108 GLY GLY A . n A 1 133 THR 133 2109 2109 THR THR A . n A 1 134 ALA 134 2110 2110 ALA ALA A . n A 1 135 GLY 135 2111 2111 GLY GLY A . n A 1 136 ASP 136 2112 2112 ASP ASP A . n A 1 137 SER 137 2113 2113 SER SER A . n A 1 138 MET 138 2114 2114 MET MET A . n A 1 139 ALA 139 2115 2115 ALA ALA A . n A 1 140 TYR 140 2116 2116 TYR TYR A . n A 1 141 HIS 141 2117 2117 HIS HIS A . n A 1 142 ASN 142 2118 2118 ASN ASN A . n A 1 143 GLY 143 2119 2119 GLY GLY A . n A 1 144 ARG 144 2120 2120 ARG ARG A . n A 1 145 SER 145 2121 2121 SER SER A . n A 1 146 PHE 146 2122 2122 PHE PHE A . n A 1 147 SER 147 2123 2123 SER SER A . n A 1 148 THR 148 2124 2124 THR THR A . n A 1 149 PHE 149 2125 2125 PHE PHE A . n A 1 150 ASP 150 2126 2126 ASP ASP A . n A 1 151 LYS 151 2127 2127 LYS LYS A . n A 1 152 ASP 152 2128 ? ? ? A . n A 1 153 THR 153 2129 ? ? ? A . n A 1 154 ASP 154 2130 ? ? ? A . n A 1 155 SER 155 2131 ? ? ? A . n A 1 156 ALA 156 2132 ? ? ? A . n A 1 157 ILE 157 2133 ? ? ? A . n A 1 158 THR 158 2134 ? ? ? A . n A 1 159 ASN 159 2135 2135 ASN ASN A . n A 1 160 CYS 160 2136 2136 CYS CYS A . n A 1 161 ALA 161 2137 2137 ALA ALA A . n A 1 162 LEU 162 2138 2138 LEU LEU A . n A 1 163 SER 163 2139 2139 SER SER A . n A 1 164 TYR 164 2140 2140 TYR TYR A . n A 1 165 LYS 165 2141 2141 LYS LYS A . n A 1 166 GLY 166 2142 2142 GLY GLY A . n A 1 167 ALA 167 2143 2143 ALA ALA A . n A 1 168 PHE 168 2144 2144 PHE PHE A . n A 1 169 TRP 169 2145 2145 TRP TRP A . n A 1 170 TYR 170 2146 2146 TYR TYR A . n A 1 171 ARG 171 2147 2147 ARG ARG A . n A 1 172 ASN 172 2148 2148 ASN ASN A . n A 1 173 CYS 173 2149 2149 CYS CYS A . n A 1 174 HIS 174 2150 2150 HIS HIS A . n A 1 175 ARG 175 2151 2151 ARG ARG A . n A 1 176 VAL 176 2152 2152 VAL VAL A . n A 1 177 ASN 177 2153 2153 ASN ASN A . n A 1 178 LEU 178 2154 2154 LEU LEU A . n A 1 179 MET 179 2155 2155 MET MET A . n A 1 180 GLY 180 2156 2156 GLY GLY A . n A 1 181 ARG 181 2157 2157 ARG ARG A . n A 1 182 TYR 182 2158 2158 TYR TYR A . n A 1 183 GLY 183 2159 2159 GLY GLY A . n A 1 184 ASP 184 2160 2160 ASP ASP A . n A 1 185 ASN 185 2161 2161 ASN ASN A . n A 1 186 ASN 186 2162 2162 ASN ASN A . n A 1 187 HIS 187 2163 2163 HIS HIS A . n A 1 188 SER 188 2164 2164 SER SER A . n A 1 189 GLN 189 2165 2165 GLN GLN A . n A 1 190 GLY 190 2166 2166 GLY GLY A . n A 1 191 VAL 191 2167 2167 VAL VAL A . n A 1 192 ASN 192 2168 2168 ASN ASN A . n A 1 193 TRP 193 2169 2169 TRP TRP A . n A 1 194 PHE 194 2170 2170 PHE PHE A . n A 1 195 HIS 195 2171 2171 HIS HIS A . n A 1 196 TRP 196 2172 2172 TRP TRP A . n A 1 197 LYS 197 2173 2173 LYS LYS A . n A 1 198 GLY 198 2174 2174 GLY GLY A . n A 1 199 HIS 199 2175 2175 HIS HIS A . n A 1 200 GLU 200 2176 2176 GLU GLU A . n A 1 201 HIS 201 2177 2177 HIS HIS A . n A 1 202 SER 202 2178 2178 SER SER A . n A 1 203 ILE 203 2179 2179 ILE ILE A . n A 1 204 GLN 204 2180 2180 GLN GLN A . n A 1 205 PHE 205 2181 2181 PHE PHE A . n A 1 206 ALA 206 2182 2182 ALA ALA A . n A 1 207 GLU 207 2183 2183 GLU GLU A . n A 1 208 MET 208 2184 2184 MET MET A . n A 1 209 LYS 209 2185 2185 LYS LYS A . n A 1 210 LEU 210 2186 2186 LEU LEU A . n A 1 211 ARG 211 2187 2187 ARG ARG A . n A 1 212 PRO 212 2188 2188 PRO PRO A . n A 1 213 SER 213 2189 2189 SER SER A . n A 1 214 ASN 214 2190 2190 ASN ASN A . n A 1 215 PHE 215 2191 2191 PHE PHE A . n A 1 216 ARG 216 2192 2192 ARG ARG A . n A 1 217 ASN 217 2193 2193 ASN ASN A . n A 1 218 LEU 218 2194 2194 LEU LEU A . n A 1 219 GLU 219 2195 ? ? ? A . n A 1 220 GLY 220 2196 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 JGG 1 2401 2401 JGG LIG A . C 3 HOH 1 2501 2203 HOH HOH A . C 3 HOH 2 2502 2202 HOH HOH A . C 3 HOH 3 2503 2201 HOH HOH A . C 3 HOH 4 2504 2366 HOH HOH A . C 3 HOH 5 2505 2221 HOH HOH A . C 3 HOH 6 2506 2232 HOH HOH A . C 3 HOH 7 2507 2210 HOH HOH A . C 3 HOH 8 2508 2236 HOH HOH A . C 3 HOH 9 2509 2254 HOH HOH A . C 3 HOH 10 2510 2204 HOH HOH A . C 3 HOH 11 2511 2238 HOH HOH A . C 3 HOH 12 2512 2211 HOH HOH A . C 3 HOH 13 2513 2222 HOH HOH A . C 3 HOH 14 2514 2235 HOH HOH A . C 3 HOH 15 2515 2274 HOH HOH A . C 3 HOH 16 2516 2217 HOH HOH A . C 3 HOH 17 2517 2220 HOH HOH A . C 3 HOH 18 2518 2223 HOH HOH A . C 3 HOH 19 2519 2245 HOH HOH A . C 3 HOH 20 2520 2206 HOH HOH A . C 3 HOH 21 2521 2219 HOH HOH A . C 3 HOH 22 2522 2228 HOH HOH A . C 3 HOH 23 2523 2268 HOH HOH A . C 3 HOH 24 2524 2231 HOH HOH A . C 3 HOH 25 2525 2209 HOH HOH A . C 3 HOH 26 2526 2227 HOH HOH A . C 3 HOH 27 2527 2214 HOH HOH A . C 3 HOH 28 2528 2215 HOH HOH A . C 3 HOH 29 2529 2297 HOH HOH A . C 3 HOH 30 2530 2234 HOH HOH A . C 3 HOH 31 2531 2212 HOH HOH A . C 3 HOH 32 2532 2213 HOH HOH A . C 3 HOH 33 2533 2229 HOH HOH A . C 3 HOH 34 2534 2255 HOH HOH A . C 3 HOH 35 2535 2224 HOH HOH A . C 3 HOH 36 2536 2252 HOH HOH A . C 3 HOH 37 2537 2242 HOH HOH A . C 3 HOH 38 2538 2290 HOH HOH A . C 3 HOH 39 2539 2251 HOH HOH A . C 3 HOH 40 2540 2226 HOH HOH A . C 3 HOH 41 2541 2267 HOH HOH A . C 3 HOH 42 2542 2257 HOH HOH A . C 3 HOH 43 2543 2263 HOH HOH A . C 3 HOH 44 2544 2218 HOH HOH A . C 3 HOH 45 2545 2256 HOH HOH A . C 3 HOH 46 2546 2279 HOH HOH A . C 3 HOH 47 2547 2248 HOH HOH A . C 3 HOH 48 2548 2237 HOH HOH A . C 3 HOH 49 2549 2244 HOH HOH A . C 3 HOH 50 2550 2299 HOH HOH A . C 3 HOH 51 2551 2225 HOH HOH A . C 3 HOH 52 2552 2243 HOH HOH A . C 3 HOH 53 2553 2240 HOH HOH A . C 3 HOH 54 2554 2216 HOH HOH A . C 3 HOH 55 2555 2310 HOH HOH A . C 3 HOH 56 2556 2322 HOH HOH A . C 3 HOH 57 2557 2284 HOH HOH A . C 3 HOH 58 2558 2280 HOH HOH A . C 3 HOH 59 2559 2205 HOH HOH A . C 3 HOH 60 2560 2291 HOH HOH A . C 3 HOH 61 2561 2239 HOH HOH A . C 3 HOH 62 2562 2292 HOH HOH A . C 3 HOH 63 2563 2285 HOH HOH A . C 3 HOH 64 2564 2230 HOH HOH A . C 3 HOH 65 2565 2269 HOH HOH A . C 3 HOH 66 2566 2249 HOH HOH A . C 3 HOH 67 2567 2266 HOH HOH A . C 3 HOH 68 2568 2241 HOH HOH A . C 3 HOH 69 2569 2276 HOH HOH A . C 3 HOH 70 2570 2208 HOH HOH A . C 3 HOH 71 2571 2340 HOH HOH A . C 3 HOH 72 2572 2250 HOH HOH A . C 3 HOH 73 2573 2264 HOH HOH A . C 3 HOH 74 2574 2306 HOH HOH A . C 3 HOH 75 2575 2288 HOH HOH A . C 3 HOH 76 2576 2247 HOH HOH A . C 3 HOH 77 2577 2258 HOH HOH A . C 3 HOH 78 2578 2275 HOH HOH A . C 3 HOH 79 2579 2265 HOH HOH A . C 3 HOH 80 2580 2261 HOH HOH A . C 3 HOH 81 2581 2207 HOH HOH A . C 3 HOH 82 2582 2298 HOH HOH A . C 3 HOH 83 2583 2270 HOH HOH A . C 3 HOH 84 2584 2271 HOH HOH A . C 3 HOH 85 2585 2286 HOH HOH A . C 3 HOH 86 2586 2260 HOH HOH A . C 3 HOH 87 2587 2332 HOH HOH A . C 3 HOH 88 2588 2281 HOH HOH A . C 3 HOH 89 2589 2346 HOH HOH A . C 3 HOH 90 2590 2331 HOH HOH A . C 3 HOH 91 2591 2283 HOH HOH A . C 3 HOH 92 2592 2302 HOH HOH A . C 3 HOH 93 2593 2282 HOH HOH A . C 3 HOH 94 2594 2296 HOH HOH A . C 3 HOH 95 2595 2273 HOH HOH A . C 3 HOH 96 2596 2259 HOH HOH A . C 3 HOH 97 2597 2233 HOH HOH A . C 3 HOH 98 2598 2334 HOH HOH A . C 3 HOH 99 2599 2246 HOH HOH A . C 3 HOH 100 2600 2314 HOH HOH A . C 3 HOH 101 2601 2318 HOH HOH A . C 3 HOH 102 2602 2328 HOH HOH A . C 3 HOH 103 2603 2300 HOH HOH A . C 3 HOH 104 2604 2289 HOH HOH A . C 3 HOH 105 2605 2287 HOH HOH A . C 3 HOH 106 2606 2278 HOH HOH A . C 3 HOH 107 2607 2315 HOH HOH A . C 3 HOH 108 2608 2304 HOH HOH A . C 3 HOH 109 2609 2253 HOH HOH A . C 3 HOH 110 2610 2323 HOH HOH A . C 3 HOH 111 2611 2326 HOH HOH A . C 3 HOH 112 2612 2316 HOH HOH A . C 3 HOH 113 2613 2312 HOH HOH A . C 3 HOH 114 2614 2309 HOH HOH A . C 3 HOH 115 2615 2325 HOH HOH A . C 3 HOH 116 2616 2303 HOH HOH A . C 3 HOH 117 2617 2311 HOH HOH A . C 3 HOH 118 2618 2294 HOH HOH A . C 3 HOH 119 2619 2301 HOH HOH A . C 3 HOH 120 2620 2319 HOH HOH A . C 3 HOH 121 2621 2324 HOH HOH A . C 3 HOH 122 2622 2307 HOH HOH A . C 3 HOH 123 2623 2368 HOH HOH A . C 3 HOH 124 2624 2321 HOH HOH A . C 3 HOH 125 2625 2337 HOH HOH A . C 3 HOH 126 2626 2317 HOH HOH A . C 3 HOH 127 2627 2293 HOH HOH A . C 3 HOH 128 2628 2339 HOH HOH A . C 3 HOH 129 2629 2305 HOH HOH A . C 3 HOH 130 2630 2308 HOH HOH A . C 3 HOH 131 2631 2335 HOH HOH A . C 3 HOH 132 2632 2313 HOH HOH A . C 3 HOH 133 2633 2329 HOH HOH A . C 3 HOH 134 2634 2320 HOH HOH A . C 3 HOH 135 2635 2327 HOH HOH A . C 3 HOH 136 2636 2338 HOH HOH A . C 3 HOH 137 2637 2348 HOH HOH A . C 3 HOH 138 2638 2295 HOH HOH A . C 3 HOH 139 2639 2333 HOH HOH A . C 3 HOH 140 2640 2330 HOH HOH A . C 3 HOH 141 2641 2272 HOH HOH A . C 3 HOH 142 2642 2345 HOH HOH A . C 3 HOH 143 2643 2336 HOH HOH A . C 3 HOH 144 2644 2344 HOH HOH A . C 3 HOH 145 2645 2350 HOH HOH A . C 3 HOH 146 2646 2352 HOH HOH A . C 3 HOH 147 2647 2341 HOH HOH A . C 3 HOH 148 2648 2342 HOH HOH A . C 3 HOH 149 2649 2343 HOH HOH A . C 3 HOH 150 2650 2349 HOH HOH A . C 3 HOH 151 2651 2353 HOH HOH A . C 3 HOH 152 2652 2347 HOH HOH A . C 3 HOH 153 2653 2355 HOH HOH A . C 3 HOH 154 2654 2359 HOH HOH A . C 3 HOH 155 2655 2365 HOH HOH A . C 3 HOH 156 2656 2361 HOH HOH A . C 3 HOH 157 2657 2362 HOH HOH A . C 3 HOH 158 2658 2360 HOH HOH A . C 3 HOH 159 2659 2351 HOH HOH A . C 3 HOH 160 2660 2372 HOH HOH A . C 3 HOH 161 2661 2354 HOH HOH A . C 3 HOH 162 2662 2358 HOH HOH A . C 3 HOH 163 2663 2364 HOH HOH A . C 3 HOH 164 2664 2356 HOH HOH A . C 3 HOH 165 2665 2363 HOH HOH A . C 3 HOH 166 2666 2370 HOH HOH A . C 3 HOH 167 2667 2367 HOH HOH A . C 3 HOH 168 2668 2374 HOH HOH A . C 3 HOH 169 2669 2357 HOH HOH A . C 3 HOH 170 2670 2369 HOH HOH A . C 3 HOH 171 2671 2371 HOH HOH A . C 3 HOH 172 2672 2373 HOH HOH A . C 3 HOH 173 2673 2375 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2020-10-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 REFMAC 5.8.0238 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 2 Aimless 0.7.4 13/12/18 program 'Phil Evans' ? 'data scaling' http://www.mrc-lmb.cam.ac.uk/harry/pre/aimless.html ? ? 3 PDB_EXTRACT 3.23 'SEP. 23, 2016' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 XDS . ? program ? ? 'data reduction' ? ? ? 5 REFMAC . ? program ? ? phasing ? ? ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 2629 ? ? O A HOH 2660 ? ? 1.54 2 1 OE1 A GLU 2011 ? ? O A HOH 2501 ? ? 1.96 3 1 O A HOH 2617 ? ? O A HOH 2631 ? ? 2.03 4 1 OD2 A ASP 2019 ? ? O A HOH 2502 ? ? 2.12 5 1 O A THR 2065 ? ? O A HOH 2503 ? ? 2.17 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 2511 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 2657 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_545 _pdbx_validate_symm_contact.dist 2.13 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C A MET 0 ? ? N A PRO 1979 ? ? 1.473 1.338 0.135 0.019 Y 2 1 CD A GLU 2011 ? ? OE2 A GLU 2011 ? ? 1.337 1.252 0.085 0.011 N 3 1 CD A GLU 2071 ? ? OE2 A GLU 2071 ? ? 1.344 1.252 0.092 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C A MET 0 ? ? N A PRO 1979 ? ? CA A PRO 1979 ? ? 109.05 119.30 -10.25 1.50 Y 2 1 NE A ARG 2120 ? ? CZ A ARG 2120 ? ? NH2 A ARG 2120 ? ? 116.98 120.30 -3.32 0.50 N 3 1 CB A TYR 2140 ? ? CA A TYR 2140 ? ? C A TYR 2140 ? ? 122.69 110.40 12.29 2.00 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 1990 ? ? -66.82 3.61 2 1 ASP A 2019 ? ? 34.48 62.18 3 1 LYS A 2030 ? ? -158.52 -18.12 4 1 ASN A 2031 ? ? -152.91 -4.32 5 1 GLU A 2052 ? ? -131.77 -126.39 6 1 ARG A 2147 ? ? -118.69 -95.27 7 1 ASN A 2148 ? ? -154.42 59.58 8 1 ASN A 2153 ? ? -141.10 51.22 9 1 ASN A 2193 ? ? -149.26 42.46 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 2033 ? CD ? A ARG 57 CD 2 1 Y 1 A ARG 2033 ? NE ? A ARG 57 NE 3 1 Y 1 A ARG 2033 ? CZ ? A ARG 57 CZ 4 1 Y 1 A ARG 2033 ? NH1 ? A ARG 57 NH1 5 1 Y 1 A ARG 2033 ? NH2 ? A ARG 57 NH2 6 1 Y 1 A LYS 2041 ? CG ? A LYS 65 CG 7 1 Y 1 A LYS 2041 ? CD ? A LYS 65 CD 8 1 Y 1 A LYS 2041 ? CE ? A LYS 65 CE 9 1 Y 1 A LYS 2041 ? NZ ? A LYS 65 NZ 10 1 Y 1 A ARG 2077 ? NE ? A ARG 101 NE 11 1 Y 1 A ARG 2077 ? CZ ? A ARG 101 CZ 12 1 Y 1 A ARG 2077 ? NH1 ? A ARG 101 NH1 13 1 Y 1 A ARG 2077 ? NH2 ? A ARG 101 NH2 14 1 Y 1 A LYS 2096 ? CG ? A LYS 120 CG 15 1 Y 1 A LYS 2096 ? CD ? A LYS 120 CD 16 1 Y 1 A LYS 2096 ? CE ? A LYS 120 CE 17 1 Y 1 A LYS 2096 ? NZ ? A LYS 120 NZ 18 1 Y 1 A ARG 2098 ? CZ ? A ARG 122 CZ 19 1 Y 1 A ARG 2098 ? NH1 ? A ARG 122 NH1 20 1 Y 1 A ARG 2098 ? NH2 ? A ARG 122 NH2 21 1 Y 1 A LYS 2102 ? CE ? A LYS 126 CE 22 1 Y 1 A LYS 2102 ? NZ ? A LYS 126 NZ 23 1 Y 1 A LYS 2141 ? CG ? A LYS 165 CG 24 1 Y 1 A LYS 2141 ? CD ? A LYS 165 CD 25 1 Y 1 A LYS 2141 ? CE ? A LYS 165 CE 26 1 Y 1 A LYS 2141 ? NZ ? A LYS 165 NZ 27 1 Y 1 A GLN 2165 ? CD ? A GLN 189 CD 28 1 Y 1 A GLN 2165 ? OE1 ? A GLN 189 OE1 29 1 Y 1 A GLN 2165 ? NE2 ? A GLN 189 NE2 30 1 Y 1 A ARG 2192 ? CG ? A ARG 216 CG 31 1 Y 1 A ARG 2192 ? CD ? A ARG 216 CD 32 1 Y 1 A ARG 2192 ? NE ? A ARG 216 NE 33 1 Y 1 A ARG 2192 ? CZ ? A ARG 216 CZ 34 1 Y 1 A ARG 2192 ? NH1 ? A ARG 216 NH1 35 1 Y 1 A ARG 2192 ? NH2 ? A ARG 216 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 2128 ? A ASP 152 2 1 Y 1 A THR 2129 ? A THR 153 3 1 Y 1 A ASP 2130 ? A ASP 154 4 1 Y 1 A SER 2131 ? A SER 155 5 1 Y 1 A ALA 2132 ? A ALA 156 6 1 Y 1 A ILE 2133 ? A ILE 157 7 1 Y 1 A THR 2134 ? A THR 158 8 1 Y 1 A GLU 2195 ? A GLU 219 9 1 Y 1 A GLY 2196 ? A GLY 220 # _pdbx_deposit_group.group_id G_1002131 _pdbx_deposit_group.group_description ;FIBRINOGEN-LIKE GLOBE DOMAIN OF HUMAN TENASCIN-C screened against the DSI Fragment Library by X-ray Crystallography at the XChem facility of Diamond Light Source beamline I04-1 ; _pdbx_deposit_group.group_title 'PanDDA analysis group deposition' _pdbx_deposit_group.group_type 'changed state' # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'N-[(4-cyanophenyl)methyl]morpholine-4-carboxamide' JGG 3 water HOH #