data_5SWD
# 
_entry.id   5SWD 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.379 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   5SWD         pdb_00005swd 10.2210/pdb5swd/pdb 
WWPDB D_1000223253 ?            ?                   
# 
loop_
_pdbx_database_related.db_name 
_pdbx_database_related.details 
_pdbx_database_related.db_id 
_pdbx_database_related.content_type 
PDB '5E54 contains the same RNA in the ligand-free state' 5E54 unspecified 
PDB .                                                     5SWE unspecified 
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.status_code_sf                  REL 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.entry_id                        5SWD 
_pdbx_database_status.recvd_initial_deposition_date   2016-08-08 
_pdbx_database_status.SG_entry                        N 
_pdbx_database_status.deposit_site                    RCSB 
_pdbx_database_status.process_site                    RCSB 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.methods_development_category    ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_nmr_data            ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
_audit_author.identifier_ORCID 
'Stagno, J.R.'   1  ?                   
'Wang, Y.-X.'    2  ?                   
'Liu, Y.'        3  ?                   
'Bhandari, Y.R.' 4  ?                   
'Conrad, C.E.'   5  ?                   
'Nelson, G.'     6  ?                   
'Li, C.'         7  ?                   
'Wendel, D.R.'   8  ?                   
'White, T.A.'    9  ?                   
'Barty, A.'      10 ?                   
'Tuckey, R.A.'   11 ?                   
'Zatsepin, N.A.' 12 ?                   
'Grant, T.D.'    13 ?                   
'Fromme, P.'     14 ?                   
'Tan, K.'        15 ?                   
'Ji, X.'         16 0000-0001-6942-1514 
'Spence, J.C.H.' 17 ?                   
# 
_citation.abstract                  ? 
_citation.abstract_id_CAS           ? 
_citation.book_id_ISBN              ? 
_citation.book_publisher            ? 
_citation.book_publisher_city       ? 
_citation.book_title                ? 
_citation.coordinate_linkage        ? 
_citation.country                   UK 
_citation.database_id_Medline       ? 
_citation.details                   ? 
_citation.id                        primary 
_citation.journal_abbrev            Nature 
_citation.journal_id_ASTM           NATUAS 
_citation.journal_id_CSD            0006 
_citation.journal_id_ISSN           1476-4687 
_citation.journal_full              ? 
_citation.journal_issue             ? 
_citation.journal_volume            541 
_citation.language                  ? 
_citation.page_first                242 
_citation.page_last                 246 
_citation.title                     'Structures of riboswitch RNA reaction states by mix-and-inject XFEL serial crystallography.' 
_citation.year                      2017 
_citation.database_id_CSD           ? 
_citation.pdbx_database_id_DOI      10.1038/nature20599 
_citation.pdbx_database_id_PubMed   27841871 
_citation.unpublished_flag          ? 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Stagno, J.R.'        1  ?                   
primary 'Liu, Y.'             2  ?                   
primary 'Bhandari, Y.R.'      3  ?                   
primary 'Conrad, C.E.'        4  ?                   
primary 'Panja, S.'           5  ?                   
primary 'Swain, M.'           6  ?                   
primary 'Fan, L.'             7  ?                   
primary 'Nelson, G.'          8  ?                   
primary 'Li, C.'              9  ?                   
primary 'Wendel, D.R.'        10 ?                   
primary 'White, T.A.'         11 ?                   
primary 'Coe, J.D.'           12 ?                   
primary 'Wiedorn, M.O.'       13 ?                   
primary 'Knoska, J.'          14 ?                   
primary 'Oberthuer, D.'       15 ?                   
primary 'Tuckey, R.A.'        16 ?                   
primary 'Yu, P.'              17 ?                   
primary 'Dyba, M.'            18 ?                   
primary 'Tarasov, S.G.'       19 ?                   
primary 'Weierstall, U.'      20 ?                   
primary 'Grant, T.D.'         21 ?                   
primary 'Schwieters, C.D.'    22 ?                   
primary 'Zhang, J.'           23 ?                   
primary 
;Ferre-D'Amare, A.R.
;
24 ?                   
primary 'Fromme, P.'          25 ?                   
primary 'Draper, D.E.'        26 ?                   
primary 'Liang, M.'           27 ?                   
primary 'Hunter, M.S.'        28 ?                   
primary 'Boutet, S.'          29 ?                   
primary 'Tan, K.'             30 ?                   
primary 'Zuo, X.'             31 ?                   
primary 'Ji, X.'              32 0000-0001-6942-1514 
primary 'Barty, A.'           33 ?                   
primary 'Zatsepin, N.A.'      34 ?                   
primary 'Chapman, H.N.'       35 ?                   
primary 'Spence, J.C.'        36 ?                   
primary 'Woodson, S.A.'       37 ?                   
primary 'Wang, Y.X.'          38 ?                   
# 
_cell.length_a           47.910 
_cell.length_b           46.720 
_cell.length_c           92.250 
_cell.angle_alpha        90.000 
_cell.angle_beta         94.060 
_cell.angle_gamma        90.000 
_cell.entry_id           5SWD 
_cell.Z_PDB              4 
_cell.pdbx_unique_axis   ? 
# 
_symmetry.space_group_name_H-M             'P 1 21 1' 
_symmetry.entry_id                         5SWD 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                4 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer     syn 'Vibrio vulnificus strain 93U204 chromosome II, adenine riboswitch aptamer domain' 22687.383 2  ? ? ? ? 
2 non-polymer syn ADENINE                                                                            135.127   1  ? ? ? ? 
3 non-polymer syn 'MAGNESIUM ION'                                                                    24.305    3  ? ? ? ? 
4 water       nat water                                                                              18.015    15 ? ? ? ? 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           polyribonucleotide 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   no 
_entity_poly.pdbx_seq_one_letter_code       GGGAAGAUAUAAUCCUAAUGAUAUGGUUUGGGAGUUUCUACCAAGAGCCUUAAACUCUUGAUUAUCUUCCC 
_entity_poly.pdbx_seq_one_letter_code_can   GGGAAGAUAUAAUCCUAAUGAUAUGGUUUGGGAGUUUCUACCAAGAGCCUUAAACUCUUGAUUAUCUUCCC 
_entity_poly.pdbx_strand_id                 A,B 
_entity_poly.pdbx_target_identifier         ? 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  G n 
1 2  G n 
1 3  G n 
1 4  A n 
1 5  A n 
1 6  G n 
1 7  A n 
1 8  U n 
1 9  A n 
1 10 U n 
1 11 A n 
1 12 A n 
1 13 U n 
1 14 C n 
1 15 C n 
1 16 U n 
1 17 A n 
1 18 A n 
1 19 U n 
1 20 G n 
1 21 A n 
1 22 U n 
1 23 A n 
1 24 U n 
1 25 G n 
1 26 G n 
1 27 U n 
1 28 U n 
1 29 U n 
1 30 G n 
1 31 G n 
1 32 G n 
1 33 A n 
1 34 G n 
1 35 U n 
1 36 U n 
1 37 U n 
1 38 C n 
1 39 U n 
1 40 A n 
1 41 C n 
1 42 C n 
1 43 A n 
1 44 A n 
1 45 G n 
1 46 A n 
1 47 G n 
1 48 C n 
1 49 C n 
1 50 U n 
1 51 U n 
1 52 A n 
1 53 A n 
1 54 A n 
1 55 C n 
1 56 U n 
1 57 C n 
1 58 U n 
1 59 U n 
1 60 G n 
1 61 A n 
1 62 U n 
1 63 U n 
1 64 A n 
1 65 U n 
1 66 C n 
1 67 U n 
1 68 U n 
1 69 C n 
1 70 C n 
1 71 C n 
# 
_pdbx_entity_src_syn.entity_id              1 
_pdbx_entity_src_syn.pdbx_src_id            1 
_pdbx_entity_src_syn.pdbx_alt_source_flag   sample 
_pdbx_entity_src_syn.pdbx_beg_seq_num       1 
_pdbx_entity_src_syn.pdbx_end_seq_num       71 
_pdbx_entity_src_syn.organism_scientific    'Vibrio vulnificus' 
_pdbx_entity_src_syn.organism_common_name   ? 
_pdbx_entity_src_syn.ncbi_taxonomy_id       672 
_pdbx_entity_src_syn.details                ? 
# 
_struct_ref.id                         1 
_struct_ref.db_name                    PDB 
_struct_ref.db_code                    5SWD 
_struct_ref.pdbx_db_accession          5SWD 
_struct_ref.pdbx_db_isoform            ? 
_struct_ref.entity_id                  1 
_struct_ref.pdbx_seq_one_letter_code   ? 
_struct_ref.pdbx_align_begin           1 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 5SWD A 1 ? 71 ? 5SWD 13 ? 83 ? 13 83 
2 1 5SWD B 1 ? 71 ? 5SWD 13 ? 83 ? 13 83 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
A   'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 
ADE non-polymer   . ADENINE                      ? 'C5 H5 N5'        135.127 
C   'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE"  ? 'C9 H14 N3 O8 P'  323.197 
G   'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 
HOH non-polymer   . WATER                        ? 'H2 O'            18.015  
MG  non-polymer   . 'MAGNESIUM ION'              ? 'Mg 2'            24.305  
U   'RNA linking' y "URIDINE-5'-MONOPHOSPHATE"   ? 'C9 H13 N2 O9 P'  324.181 
# 
_exptl.absorpt_coefficient_mu     ? 
_exptl.absorpt_correction_T_max   ? 
_exptl.absorpt_correction_T_min   ? 
_exptl.absorpt_correction_type    ? 
_exptl.absorpt_process_details    ? 
_exptl.entry_id                   5SWD 
_exptl.crystals_number            1 
_exptl.details                    ? 
_exptl.method                     'X-RAY DIFFRACTION' 
_exptl.method_details             ? 
# 
_exptl_crystal.colour                      ? 
_exptl_crystal.density_diffrn              ? 
_exptl_crystal.density_Matthews            2.27 
_exptl_crystal.density_method              ? 
_exptl_crystal.density_percent_sol         45.81 
_exptl_crystal.description                 ? 
_exptl_crystal.F_000                       ? 
_exptl_crystal.id                          1 
_exptl_crystal.preparation                 ? 
_exptl_crystal.size_max                    ? 
_exptl_crystal.size_mid                    ? 
_exptl_crystal.size_min                    ? 
_exptl_crystal.size_rad                    ? 
_exptl_crystal.colour_lustre               ? 
_exptl_crystal.colour_modifier             ? 
_exptl_crystal.colour_primary              ? 
_exptl_crystal.density_meas                ? 
_exptl_crystal.density_meas_esd            ? 
_exptl_crystal.density_meas_gt             ? 
_exptl_crystal.density_meas_lt             ? 
_exptl_crystal.density_meas_temp           ? 
_exptl_crystal.density_meas_temp_esd       ? 
_exptl_crystal.density_meas_temp_gt        ? 
_exptl_crystal.density_meas_temp_lt        ? 
_exptl_crystal.pdbx_crystal_image_url      ? 
_exptl_crystal.pdbx_crystal_image_format   ? 
_exptl_crystal.pdbx_mosaicity              ? 
_exptl_crystal.pdbx_mosaicity_esd          ? 
# 
_exptl_crystal_grow.apparatus       ? 
_exptl_crystal_grow.atmosphere      ? 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.details         ? 
_exptl_crystal_grow.method          'BATCH MODE' 
_exptl_crystal_grow.method_ref      ? 
_exptl_crystal_grow.pH              6.5 
_exptl_crystal_grow.pressure        ? 
_exptl_crystal_grow.pressure_esd    ? 
_exptl_crystal_grow.seeding         ? 
_exptl_crystal_grow.seeding_ref     ? 
_exptl_crystal_grow.temp            295 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.temp_esd        ? 
_exptl_crystal_grow.time            ? 
_exptl_crystal_grow.pdbx_details    
;40 mM sodium cacodylate, pH 6.5, 80 mM potassium chloride, 100 mM magnesium chloride, 12 mM spermine tetrahydrochloride, 65% v/v (+/-)-2-methyl-2,4-pentanediol
;
_exptl_crystal_grow.pdbx_pH_range   ? 
# 
_diffrn.ambient_environment    ? 
_diffrn.ambient_temp           295 
_diffrn.ambient_temp_details   ? 
_diffrn.ambient_temp_esd       ? 
_diffrn.crystal_id             1 
_diffrn.crystal_support        ? 
_diffrn.crystal_treatment      ? 
_diffrn.details                ? 
_diffrn.id                     1 
_diffrn.ambient_pressure       ? 
_diffrn.ambient_pressure_esd   ? 
_diffrn.ambient_pressure_gt    ? 
_diffrn.ambient_pressure_lt    ? 
_diffrn.ambient_temp_gt        ? 
_diffrn.ambient_temp_lt        ? 
# 
_diffrn_detector.details                      ? 
_diffrn_detector.detector                     PIXEL 
_diffrn_detector.diffrn_id                    1 
_diffrn_detector.type                         'CS-PAD CXI-1' 
_diffrn_detector.area_resol_mean              ? 
_diffrn_detector.dtime                        ? 
_diffrn_detector.pdbx_frames_total            ? 
_diffrn_detector.pdbx_collection_time_total   ? 
_diffrn_detector.pdbx_collection_date         2016-06-14 
# 
_diffrn_radiation.collimation                      ? 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.filter_edge                      ? 
_diffrn_radiation.inhomogeneity                    ? 
_diffrn_radiation.monochromator                    'KB mirror' 
_diffrn_radiation.polarisn_norm                    ? 
_diffrn_radiation.polarisn_ratio                   ? 
_diffrn_radiation.probe                            ? 
_diffrn_radiation.type                             ? 
_diffrn_radiation.xray_symbol                      ? 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   M 
_diffrn_radiation.pdbx_wavelength_list             ? 
_diffrn_radiation.pdbx_wavelength                  ? 
_diffrn_radiation.pdbx_diffrn_protocol             'SINGLE WAVELENGTH' 
_diffrn_radiation.pdbx_analyzer                    ? 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   1.3 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.current                     ? 
_diffrn_source.details                     ? 
_diffrn_source.diffrn_id                   1 
_diffrn_source.power                       ? 
_diffrn_source.size                        ? 
_diffrn_source.source                      'FREE ELECTRON LASER' 
_diffrn_source.target                      ? 
_diffrn_source.type                        'SLAC LCLS BEAMLINE CXI' 
_diffrn_source.voltage                     ? 
_diffrn_source.take-off_angle              ? 
_diffrn_source.pdbx_wavelength_list        1.3 
_diffrn_source.pdbx_wavelength             ? 
_diffrn_source.pdbx_synchrotron_beamline   CXI 
_diffrn_source.pdbx_synchrotron_site       'SLAC LCLS' 
# 
_reflns.B_iso_Wilson_estimate            80.9 
_reflns.entry_id                         5SWD 
_reflns.data_reduction_details           ? 
_reflns.data_reduction_method            ? 
_reflns.d_resolution_high                2.5 
_reflns.d_resolution_low                 31.06 
_reflns.details                          ? 
_reflns.limit_h_max                      ? 
_reflns.limit_h_min                      ? 
_reflns.limit_k_max                      ? 
_reflns.limit_k_min                      ? 
_reflns.limit_l_max                      ? 
_reflns.limit_l_min                      ? 
_reflns.number_all                       ? 
_reflns.number_obs                       14357 
_reflns.observed_criterion               ? 
_reflns.observed_criterion_F_max         ? 
_reflns.observed_criterion_F_min         ? 
_reflns.observed_criterion_I_max         ? 
_reflns.observed_criterion_I_min         ? 
_reflns.observed_criterion_sigma_F       ? 
_reflns.observed_criterion_sigma_I       ? 
_reflns.percent_possible_obs             100 
_reflns.R_free_details                   ? 
_reflns.Rmerge_F_all                     ? 
_reflns.Rmerge_F_obs                     ? 
_reflns.Friedel_coverage                 ? 
_reflns.number_gt                        ? 
_reflns.threshold_expression             ? 
_reflns.pdbx_redundancy                  346.8 
_reflns.pdbx_Rmerge_I_obs                ? 
_reflns.pdbx_Rmerge_I_all                ? 
_reflns.pdbx_Rsym_value                  ? 
_reflns.pdbx_netI_over_av_sigmaI         ? 
_reflns.pdbx_netI_over_sigmaI            3.49 
_reflns.pdbx_res_netI_over_av_sigmaI_2   ? 
_reflns.pdbx_res_netI_over_sigmaI_2      ? 
_reflns.pdbx_chi_squared                 ? 
_reflns.pdbx_scaling_rejects             ? 
_reflns.pdbx_d_res_high_opt              ? 
_reflns.pdbx_d_res_low_opt               ? 
_reflns.pdbx_d_res_opt_method            ? 
_reflns.phase_calculation_details        ? 
_reflns.pdbx_Rrim_I_all                  ? 
_reflns.pdbx_Rpim_I_all                  ? 
_reflns.pdbx_d_opt                       ? 
_reflns.pdbx_number_measured_all         ? 
_reflns.pdbx_diffrn_id                   1 
_reflns.pdbx_ordinal                     1 
_reflns.pdbx_CC_half                     ? 
_reflns.pdbx_R_split                     0.1410 
# 
_reflns_shell.d_res_high                  2.5 
_reflns_shell.d_res_low                   2.59 
_reflns_shell.meanI_over_sigI_all         ? 
_reflns_shell.meanI_over_sigI_obs         ? 
_reflns_shell.number_measured_all         ? 
_reflns_shell.number_measured_obs         ? 
_reflns_shell.number_possible             ? 
_reflns_shell.number_unique_all           1431 
_reflns_shell.number_unique_obs           ? 
_reflns_shell.percent_possible_all        100 
_reflns_shell.percent_possible_obs        ? 
_reflns_shell.Rmerge_F_all                ? 
_reflns_shell.Rmerge_F_obs                ? 
_reflns_shell.Rmerge_I_all                ? 
_reflns_shell.Rmerge_I_obs                ? 
_reflns_shell.meanI_over_sigI_gt          ? 
_reflns_shell.meanI_over_uI_all           ? 
_reflns_shell.meanI_over_uI_gt            ? 
_reflns_shell.number_measured_gt          ? 
_reflns_shell.number_unique_gt            ? 
_reflns_shell.percent_possible_gt         ? 
_reflns_shell.Rmerge_F_gt                 ? 
_reflns_shell.Rmerge_I_gt                 ? 
_reflns_shell.pdbx_redundancy             188.3 
_reflns_shell.pdbx_Rsym_value             ? 
_reflns_shell.pdbx_chi_squared            ? 
_reflns_shell.pdbx_netI_over_sigmaI_all   ? 
_reflns_shell.pdbx_netI_over_sigmaI_obs   ? 
_reflns_shell.pdbx_Rrim_I_all             ? 
_reflns_shell.pdbx_Rpim_I_all             ? 
_reflns_shell.pdbx_rejects                ? 
_reflns_shell.pdbx_ordinal                1 
_reflns_shell.pdbx_diffrn_id              1 
_reflns_shell.pdbx_CC_half                ? 
_reflns_shell.pdbx_R_split                0.8684 
# 
_refine.entry_id                                 5SWD 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.ls_d_res_high                            2.5000 
_refine.ls_d_res_low                             30.9200 
_refine.pdbx_ls_sigma_F                          0.000 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.ls_percent_reflns_obs                    97.6200 
_refine.ls_number_reflns_obs                     13212 
_refine.ls_number_reflns_all                     ? 
_refine.pdbx_ls_cross_valid_method               THROUGHOUT 
_refine.ls_matrix_type                           ? 
_refine.pdbx_R_Free_selection_details            RANDOM 
_refine.details                                  'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT U VALUES      : WITH TLS ADDED' 
_refine.ls_R_factor_all                          ? 
_refine.ls_R_factor_obs                          0.1969 
_refine.ls_R_factor_R_work                       0.1949 
_refine.ls_wR_factor_R_work                      0.2176 
_refine.ls_R_factor_R_free                       0.2294 
_refine.ls_wR_factor_R_free                      0.2579 
_refine.ls_percent_reflns_R_free                 5.5000 
_refine.ls_number_reflns_R_free                  768 
_refine.ls_number_reflns_R_work                  ? 
_refine.ls_R_factor_R_free_error                 ? 
_refine.B_iso_mean                               90.5900 
_refine.solvent_model_param_bsol                 ? 
_refine.solvent_model_param_ksol                 ? 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.aniso_B[1][1]                            -2.7300 
_refine.aniso_B[2][2]                            2.4100 
_refine.aniso_B[3][3]                            0.4000 
_refine.aniso_B[1][2]                            0.0000 
_refine.aniso_B[1][3]                            -0.5800 
_refine.aniso_B[2][3]                            0.0000 
_refine.correlation_coeff_Fo_to_Fc               0.9660 
_refine.correlation_coeff_Fo_to_Fc_free          0.9620 
_refine.overall_SU_R_Cruickshank_DPI             0.6685 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
_refine.overall_SU_R_free                        0.2762 
_refine.pdbx_overall_ESU_R                       0.6690 
_refine.pdbx_overall_ESU_R_Free                  0.2760 
_refine.overall_SU_ML                            0.3420 
_refine.overall_SU_B                             38.4070 
_refine.solvent_model_details                    MASK 
_refine.pdbx_solvent_vdw_probe_radii             1.2000 
_refine.pdbx_solvent_ion_probe_radii             0.8000 
_refine.pdbx_solvent_shrinkage_radii             0.8000 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.pdbx_starting_model                      5E54 
_refine.pdbx_method_to_determine_struct          'MOLECULAR REPLACEMENT' 
_refine.pdbx_stereochemistry_target_values       'MAXIMUM LIKELIHOOD' 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.overall_FOM_work_R_set                   0.6535 
_refine.B_iso_max                                219.210 
_refine.B_iso_min                                46.710 
_refine.pdbx_overall_phase_error                 ? 
_refine.occupancy_max                            ? 
_refine.occupancy_min                            ? 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.pdbx_ls_sigma_I                          ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.ls_R_factor_R_free_error_details         ? 
# 
_refine_hist.cycle_id                         final 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.d_res_high                       2.5000 
_refine_hist.d_res_low                        30.9200 
_refine_hist.pdbx_number_atoms_ligand         13 
_refine_hist.number_atoms_solvent             15 
_refine_hist.number_atoms_total               2854 
_refine_hist.pdbx_number_residues_total       133 
_refine_hist.pdbx_B_iso_mean_ligand           85.09 
_refine_hist.pdbx_B_iso_mean_solvent          70.49 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   2826 
# 
loop_
_refine_ls_restr.pdbx_refine_id 
_refine_ls_restr.type 
_refine_ls_restr.number 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.weight 
_refine_ls_restr.pdbx_restraint_function 
'X-RAY DIFFRACTION' r_bond_refined_d     3218 0.007 0.011 ? ? 
'X-RAY DIFFRACTION' r_angle_refined_deg  5012 1.524 1.289 ? ? 
'X-RAY DIFFRACTION' r_chiral_restr       540  0.101 0.200 ? ? 
'X-RAY DIFFRACTION' r_gen_planes_refined 1391 0.010 0.020 ? ? 
'X-RAY DIFFRACTION' r_scbond_it          3218 5.272 7.064 ? ? 
# 
loop_
_refine_ls_restr_ncs.pdbx_ordinal 
_refine_ls_restr_ncs.pdbx_refine_id 
_refine_ls_restr_ncs.pdbx_ens_id 
_refine_ls_restr_ncs.dom_id 
_refine_ls_restr_ncs.pdbx_type 
_refine_ls_restr_ncs.pdbx_auth_asym_id 
_refine_ls_restr_ncs.pdbx_number 
_refine_ls_restr_ncs.rms_dev_position 
_refine_ls_restr_ncs.weight_position 
_refine_ls_restr_ncs.ncs_model_details 
_refine_ls_restr_ncs.rms_dev_B_iso 
_refine_ls_restr_ncs.weight_B_iso 
_refine_ls_restr_ncs.pdbx_asym_id 
_refine_ls_restr_ncs.pdbx_rms 
_refine_ls_restr_ncs.pdbx_weight 
1 'X-RAY DIFFRACTION' 1 1 'interatomic distance' A 3441 0.050 0.050 ? ? ? ? ? ? 
2 'X-RAY DIFFRACTION' 1 2 'interatomic distance' B 3441 0.050 0.050 ? ? ? ? ? ? 
# 
_refine_ls_shell.d_res_high                       2.5030 
_refine_ls_shell.d_res_low                        2.5680 
_refine_ls_shell.pdbx_total_number_of_bins_used   20 
_refine_ls_shell.percent_reflns_obs               73.3500 
_refine_ls_shell.number_reflns_R_work             735 
_refine_ls_shell.R_factor_all                     ? 
_refine_ls_shell.R_factor_R_work                  0.5480 
_refine_ls_shell.R_factor_R_free                  0.7350 
_refine_ls_shell.percent_reflns_R_free            ? 
_refine_ls_shell.number_reflns_R_free             44 
_refine_ls_shell.R_factor_R_free_error            ? 
_refine_ls_shell.number_reflns_all                779 
_refine_ls_shell.number_reflns_obs                ? 
_refine_ls_shell.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_ls_shell.R_factor_obs                     ? 
# 
loop_
_struct_ncs_dom.pdbx_ens_id 
_struct_ncs_dom.id 
_struct_ncs_dom.details 
1 1 A 
1 2 B 
# 
loop_
_struct_ncs_dom_lim.pdbx_ens_id 
_struct_ncs_dom_lim.dom_id 
_struct_ncs_dom_lim.pdbx_component_id 
_struct_ncs_dom_lim.beg_label_asym_id 
_struct_ncs_dom_lim.beg_label_comp_id 
_struct_ncs_dom_lim.beg_label_seq_id 
_struct_ncs_dom_lim.beg_label_alt_id 
_struct_ncs_dom_lim.end_label_asym_id 
_struct_ncs_dom_lim.end_label_comp_id 
_struct_ncs_dom_lim.end_label_seq_id 
_struct_ncs_dom_lim.end_label_alt_id 
_struct_ncs_dom_lim.beg_auth_asym_id 
_struct_ncs_dom_lim.beg_auth_comp_id 
_struct_ncs_dom_lim.beg_auth_seq_id 
_struct_ncs_dom_lim.end_auth_asym_id 
_struct_ncs_dom_lim.end_auth_comp_id 
_struct_ncs_dom_lim.end_auth_seq_id 
_struct_ncs_dom_lim.pdbx_refine_code 
_struct_ncs_dom_lim.selection_details 
1 1 0 A G 1 . A A 64 . A G 13 A A 76 0 ? 
1 2 0 B G 1 . B A 64 . B G 13 B A 76 0 ? 
# 
_struct_ncs_ens.id        1 
_struct_ncs_ens.details   ? 
# 
_struct.entry_id                     5SWD 
_struct.title                        'Structure of the adenine riboswitch aptamer domain in an intermediate-bound state' 
_struct.pdbx_model_details           ? 
_struct.pdbx_formula_weight          ? 
_struct.pdbx_formula_weight_method   ? 
_struct.pdbx_model_type_details      ? 
_struct.pdbx_CASP_flag               N 
# 
_struct_keywords.entry_id        5SWD 
_struct_keywords.text            
'adenine riboswitch, purine riboswitch, ligand mixing, intermediate state, RNA, gene regulation, X-ray free electron laser' 
_struct_keywords.pdbx_keywords   RNA 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 1 ? 
C N N 2 ? 
D N N 3 ? 
E N N 3 ? 
F N N 3 ? 
G N N 4 ? 
H N N 4 ? 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
metalc1   metalc ? ? A G  25 OP1 ? ? ? 1_555 D MG  .  MG  ? ? A G  37  A MG  102 1_555 ? ? ? ? ? ? ?                    2.282 ? ? 
metalc2   metalc ? ? A A  40 OP1 ? ? ? 1_555 E MG  .  MG  ? ? A A  52  A MG  103 1_555 ? ? ? ? ? ? ?                    1.800 ? ? 
metalc3   metalc ? ? D MG .  MG  ? ? ? 1_555 G HOH .  O   ? ? A MG 102 A HOH 205 1_555 ? ? ? ? ? ? ?                    2.483 ? ? 
metalc4   metalc ? ? D MG .  MG  ? ? ? 1_555 G HOH .  O   ? ? A MG 102 A HOH 206 1_555 ? ? ? ? ? ? ?                    2.377 ? ? 
metalc5   metalc ? ? D MG .  MG  ? ? ? 1_555 B U   56 OP1 ? ? A MG 102 B U   68  1_555 ? ? ? ? ? ? ?                    2.263 ? ? 
metalc6   metalc ? ? D MG .  MG  ? ? ? 1_555 H HOH .  O   ? ? A MG 102 B HOH 204 1_555 ? ? ? ? ? ? ?                    1.875 ? ? 
metalc7   metalc ? ? D MG .  MG  ? ? ? 1_555 H HOH .  O   ? ? A MG 102 B HOH 207 1_555 ? ? ? ? ? ? ?                    1.964 ? ? 
metalc8   metalc ? ? E MG .  MG  ? ? ? 1_555 G HOH .  O   ? ? A MG 103 A HOH 201 1_555 ? ? ? ? ? ? ?                    2.174 ? ? 
metalc9   metalc ? ? E MG .  MG  ? ? ? 1_555 G HOH .  O   ? ? A MG 103 A HOH 207 1_555 ? ? ? ? ? ? ?                    2.552 ? ? 
metalc10  metalc ? ? E MG .  MG  ? ? ? 1_555 H HOH .  O   ? ? A MG 103 B HOH 205 1_555 ? ? ? ? ? ? ?                    2.204 ? ? 
metalc11  metalc ? ? E MG .  MG  ? ? ? 1_555 H HOH .  O   ? ? A MG 103 B HOH 206 1_555 ? ? ? ? ? ? ?                    2.141 ? ? 
metalc12  metalc ? ? E MG .  MG  ? ? ? 1_555 H HOH .  O   ? ? A MG 103 B HOH 208 1_455 ? ? ? ? ? ? ?                    1.733 ? ? 
metalc13  metalc ? ? B A  12 OP2 ? ? ? 1_555 F MG  .  MG  ? ? B A  24  B MG  101 1_555 ? ? ? ? ? ? ?                    2.179 ? ? 
metalc14  metalc ? ? F MG .  MG  ? ? ? 1_555 H HOH .  O   ? ? B MG 101 B HOH 201 1_555 ? ? ? ? ? ? ?                    2.596 ? ? 
metalc15  metalc ? ? F MG .  MG  ? ? ? 1_555 H HOH .  O   ? ? B MG 101 B HOH 202 1_555 ? ? ? ? ? ? ?                    1.877 ? ? 
metalc16  metalc ? ? F MG .  MG  ? ? ? 1_555 H HOH .  O   ? ? B MG 101 B HOH 203 1_555 ? ? ? ? ? ? ?                    1.904 ? ? 
hydrog1   hydrog ? ? A A  7  N6  ? ? ? 1_555 A U   65 O4  ? ? A A  19  A U   77  1_555 ? ? ? ? ? ? 'A-U PAIR'           ?     ? ? 
hydrog2   hydrog ? ? A U  8  N3  ? ? ? 1_555 A A   64 N1  ? ? A U  20  A A   76  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog3   hydrog ? ? A U  8  O4  ? ? ? 1_555 A A   64 N6  ? ? A U  20  A A   76  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog4   hydrog ? ? A A  9  N1  A ? ? 1_555 A U   63 N3  ? ? A A  21  A U   75  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog5   hydrog ? ? A A  9  N6  A ? ? 1_555 A U   63 O4  ? ? A A  21  A U   75  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog6   hydrog ? ? A U  13 N3  ? ? ? 1_555 A A   33 N1  ? ? A U  25  A A   45  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog7   hydrog ? ? A U  13 O4  ? ? ? 1_555 A A   33 N6  ? ? A U  25  A A   45  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog8   hydrog ? ? A C  14 N3  ? ? ? 1_555 A G   32 N1  ? ? A C  26  A G   44  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog9   hydrog ? ? A C  14 N4  ? ? ? 1_555 A G   32 O6  ? ? A C  26  A G   44  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog10  hydrog ? ? A C  14 O2  ? ? ? 1_555 A G   32 N2  ? ? A C  26  A G   44  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog11  hydrog ? ? A C  15 N3  ? ? ? 1_555 A G   31 N1  ? ? A C  27  A G   43  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog12  hydrog ? ? A C  15 N4  ? ? ? 1_555 A G   31 O6  ? ? A C  27  A G   43  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog13  hydrog ? ? A C  15 O2  ? ? ? 1_555 A G   31 N2  ? ? A C  27  A G   43  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog14  hydrog ? ? A U  16 N3  ? ? ? 1_555 A G   30 O6  ? ? A U  28  A G   42  1_555 ? ? ? ? ? ? TYPE_28_PAIR         ?     ? ? 
hydrog15  hydrog ? ? A U  16 O2  ? ? ? 1_555 A G   30 N1  ? ? A U  28  A G   42  1_555 ? ? ? ? ? ? TYPE_28_PAIR         ?     ? ? 
hydrog16  hydrog ? ? A A  17 N1  ? ? ? 1_555 A U   29 N3  ? ? A A  29  A U   41  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog17  hydrog ? ? A A  17 N6  ? ? ? 1_555 A U   29 O4  ? ? A A  29  A U   41  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog18  hydrog ? ? A A  18 N1  ? ? ? 1_555 A U   28 N3  ? ? A A  30  A U   40  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog19  hydrog ? ? A A  18 N6  ? ? ? 1_555 A U   28 O4  ? ? A A  30  A U   40  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog20  hydrog ? ? A U  19 N3  ? ? ? 1_555 A U   27 O4  ? ? A U  31  A U   39  1_555 ? ? ? ? ? ? TYPE_16_PAIR         ?     ? ? 
hydrog21  hydrog ? ? A U  19 O2  ? ? ? 1_555 A U   27 N3  ? ? A U  31  A U   39  1_555 ? ? ? ? ? ? TYPE_16_PAIR         ?     ? ? 
hydrog22  hydrog ? ? A A  21 N1  ? ? ? 1_555 A A   54 N6  ? ? A A  33  A A   66  1_555 ? ? ? ? ? ? TYPE_5_PAIR          ?     ? ? 
hydrog23  hydrog ? ? A A  21 N6  ? ? ? 1_555 A A   54 N7  ? ? A A  33  A A   66  1_555 ? ? ? ? ? ? TYPE_5_PAIR          ?     ? ? 
hydrog24  hydrog ? ? A U  22 N3  ? ? ? 1_555 A A   53 N7  ? ? A U  34  A A   65  1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ?     ? ? 
hydrog25  hydrog ? ? A U  22 O2  ? ? ? 1_555 A A   53 N6  ? ? A U  34  A A   65  1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ?     ? ? 
hydrog26  hydrog ? ? A A  23 N6  ? ? ? 1_555 A A   52 N1  ? ? A A  35  A A   64  1_555 ? ? ? ? ? ? TYPE_5_PAIR          ?     ? ? 
hydrog27  hydrog ? ? A A  23 N7  ? ? ? 1_555 A A   52 N6  ? ? A A  35  A A   64  1_555 ? ? ? ? ? ? TYPE_5_PAIR          ?     ? ? 
hydrog28  hydrog ? ? A G  25 N1  ? ? ? 1_555 A C   49 N3  ? ? A G  37  A C   61  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog29  hydrog ? ? A G  25 N2  ? ? ? 1_555 A C   49 O2  ? ? A G  37  A C   61  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog30  hydrog ? ? A G  25 O6  ? ? ? 1_555 A C   49 N4  ? ? A G  37  A C   61  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog31  hydrog ? ? A G  26 N1  ? ? ? 1_555 A C   48 N3  ? ? A G  38  A C   60  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog32  hydrog ? ? A G  26 N2  ? ? ? 1_555 A C   48 O2  ? ? A G  38  A C   60  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog33  hydrog ? ? A G  26 O6  ? ? ? 1_555 A C   48 N4  ? ? A G  38  A C   60  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog34  hydrog ? ? A G  26 N2  ? ? ? 1_555 A A   54 N1  ? ? A G  38  A A   66  1_555 ? ? ? ? ? ? TYPE_10_PAIR         ?     ? ? 
hydrog35  hydrog ? ? A G  26 N3  ? ? ? 1_555 A A   54 N6  ? ? A G  38  A A   66  1_555 ? ? ? ? ? ? TYPE_10_PAIR         ?     ? ? 
hydrog36  hydrog ? ? A G  34 N1  ? ? ? 1_555 A C   41 N3  ? ? A G  46  A C   53  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog37  hydrog ? ? A G  34 N2  ? ? ? 1_555 A C   41 O2  ? ? A G  46  A C   53  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog38  hydrog ? ? A G  34 O6  ? ? ? 1_555 A C   41 N4  ? ? A G  46  A C   53  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog39  hydrog ? ? A U  35 N3  ? ? ? 1_555 A A   40 N1  ? ? A U  47  A A   52  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog40  hydrog ? ? A U  35 O4  ? ? ? 1_555 A A   40 N6  ? ? A U  47  A A   52  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog41  hydrog ? ? A U  37 N3  ? ? ? 1_555 A A   61 N1  ? ? A U  49  A A   73  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog42  hydrog ? ? A U  37 O4  ? ? ? 1_555 A A   61 N6  ? ? A U  49  A A   73  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog43  hydrog ? ? A C  42 N3  ? ? ? 1_555 A G   60 N1  ? ? A C  54  A G   72  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog44  hydrog ? ? A C  42 N4  ? ? ? 1_555 A G   60 O6  ? ? A C  54  A G   72  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog45  hydrog ? ? A C  42 O2  ? ? ? 1_555 A G   60 N2  ? ? A C  54  A G   72  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog46  hydrog ? ? A A  43 N1  ? ? ? 1_555 A U   59 N3  ? ? A A  55  A U   71  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog47  hydrog ? ? A A  43 N6  ? ? ? 1_555 A U   59 O4  ? ? A A  55  A U   71  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog48  hydrog ? ? A A  44 N1  ? ? ? 1_555 A U   58 N3  ? ? A A  56  A U   70  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog49  hydrog ? ? A A  44 N6  ? ? ? 1_555 A U   58 O4  ? ? A A  56  A U   70  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog50  hydrog ? ? A G  45 N1  ? ? ? 1_555 A C   57 N3  ? ? A G  57  A C   69  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog51  hydrog ? ? A G  45 N2  ? ? ? 1_555 A C   57 O2  ? ? A G  57  A C   69  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog52  hydrog ? ? A G  45 O6  ? ? ? 1_555 A C   57 N4  ? ? A G  57  A C   69  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog53  hydrog ? ? A A  46 N1  ? ? ? 1_555 A U   56 N3  ? ? A A  58  A U   68  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog54  hydrog ? ? A A  46 N6  ? ? ? 1_555 A U   56 O4  ? ? A A  58  A U   68  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog55  hydrog ? ? A G  47 N1  ? ? ? 1_555 A C   55 N3  ? ? A G  59  A C   67  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog56  hydrog ? ? A G  47 N2  ? ? ? 1_555 A C   55 O2  ? ? A G  59  A C   67  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog57  hydrog ? ? A G  47 O6  ? ? ? 1_555 A C   55 N4  ? ? A G  59  A C   67  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog58  hydrog ? ? A C  49 O2  ? ? ? 1_555 A A   53 N6  ? ? A C  61  A A   65  1_555 ? ? ? ? ? ? 'C-A MISPAIR'        ?     ? ? 
hydrog59  hydrog ? ? B A  4  N1  ? ? ? 1_555 B U   68 N3  ? ? B A  16  B U   80  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog60  hydrog ? ? B A  4  N6  ? ? ? 1_555 B U   68 O4  ? ? B A  16  B U   80  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog61  hydrog ? ? B A  5  N1  ? ? ? 1_555 B U   67 N3  ? ? B A  17  B U   79  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog62  hydrog ? ? B A  5  N6  ? ? ? 1_555 B U   67 O4  ? ? B A  17  B U   79  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog63  hydrog ? ? B G  6  N1  ? ? ? 1_555 B C   66 N3  ? ? B G  18  B C   78  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog64  hydrog ? ? B G  6  N2  ? ? ? 1_555 B C   66 O2  ? ? B G  18  B C   78  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog65  hydrog ? ? B G  6  O6  ? ? ? 1_555 B C   66 N4  ? ? B G  18  B C   78  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog66  hydrog ? ? B A  7  N1  ? ? ? 1_555 B U   65 N3  ? ? B A  19  B U   77  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog67  hydrog ? ? B A  7  N6  ? ? ? 1_555 B U   65 O4  ? ? B A  19  B U   77  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog68  hydrog ? ? B U  8  N3  ? ? ? 1_555 B A   64 N1  ? ? B U  20  B A   76  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog69  hydrog ? ? B U  8  O4  ? ? ? 1_555 B A   64 N6  ? ? B U  20  B A   76  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog70  hydrog ? ? B A  9  N1  ? ? ? 1_555 B U   63 N3  ? ? B A  21  B U   75  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog71  hydrog ? ? B A  9  N6  ? ? ? 1_555 B U   63 O4  ? ? B A  21  B U   75  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog72  hydrog ? ? B A  11 N6  ? ? ? 1_555 B U   62 O2  ? ? B A  23  B U   74  1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ?     ? ? 
hydrog73  hydrog ? ? B A  11 N7  ? ? ? 1_555 B U   62 N3  ? ? B A  23  B U   74  1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ?     ? ? 
hydrog74  hydrog ? ? B U  13 N3  ? ? ? 1_555 B A   33 N1  ? ? B U  25  B A   45  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog75  hydrog ? ? B U  13 O4  ? ? ? 1_555 B A   33 N6  ? ? B U  25  B A   45  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog76  hydrog ? ? B C  14 N3  ? ? ? 1_555 B G   32 N1  ? ? B C  26  B G   44  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog77  hydrog ? ? B C  14 N4  ? ? ? 1_555 B G   32 O6  ? ? B C  26  B G   44  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog78  hydrog ? ? B C  14 O2  ? ? ? 1_555 B G   32 N2  ? ? B C  26  B G   44  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog79  hydrog ? ? B C  15 N3  ? ? ? 1_555 B G   31 N1  ? ? B C  27  B G   43  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog80  hydrog ? ? B C  15 N4  ? ? ? 1_555 B G   31 O6  ? ? B C  27  B G   43  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog81  hydrog ? ? B C  15 O2  ? ? ? 1_555 B G   31 N2  ? ? B C  27  B G   43  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog82  hydrog ? ? B U  16 N3  ? ? ? 1_555 B G   30 O6  ? ? B U  28  B G   42  1_555 ? ? ? ? ? ? TYPE_28_PAIR         ?     ? ? 
hydrog83  hydrog ? ? B U  16 O2  ? ? ? 1_555 B G   30 N1  ? ? B U  28  B G   42  1_555 ? ? ? ? ? ? TYPE_28_PAIR         ?     ? ? 
hydrog84  hydrog ? ? B A  17 N1  ? ? ? 1_555 B U   29 N3  ? ? B A  29  B U   41  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog85  hydrog ? ? B A  17 N6  ? ? ? 1_555 B U   29 O4  ? ? B A  29  B U   41  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog86  hydrog ? ? B A  18 N1  ? ? ? 1_555 B U   28 N3  ? ? B A  30  B U   40  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog87  hydrog ? ? B A  18 N6  ? ? ? 1_555 B U   28 O4  ? ? B A  30  B U   40  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog88  hydrog ? ? B U  19 N3  ? ? ? 1_555 B U   27 O4  ? ? B U  31  B U   39  1_555 ? ? ? ? ? ? TYPE_16_PAIR         ?     ? ? 
hydrog89  hydrog ? ? B U  19 O2  ? ? ? 1_555 B U   27 N3  ? ? B U  31  B U   39  1_555 ? ? ? ? ? ? TYPE_16_PAIR         ?     ? ? 
hydrog90  hydrog ? ? B A  21 N1  ? ? ? 1_555 B A   54 N6  ? ? B A  33  B A   66  1_555 ? ? ? ? ? ? TYPE_5_PAIR          ?     ? ? 
hydrog91  hydrog ? ? B A  21 N6  ? ? ? 1_555 B A   54 N7  ? ? B A  33  B A   66  1_555 ? ? ? ? ? ? TYPE_5_PAIR          ?     ? ? 
hydrog92  hydrog ? ? B U  22 N3  ? ? ? 1_555 B A   53 N7  ? ? B U  34  B A   65  1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ?     ? ? 
hydrog93  hydrog ? ? B U  22 O2  ? ? ? 1_555 B A   53 N6  ? ? B U  34  B A   65  1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ?     ? ? 
hydrog94  hydrog ? ? B A  23 N6  ? ? ? 1_555 B A   52 N1  ? ? B A  35  B A   64  1_555 ? ? ? ? ? ? TYPE_5_PAIR          ?     ? ? 
hydrog95  hydrog ? ? B A  23 N7  ? ? ? 1_555 B A   52 N6  ? ? B A  35  B A   64  1_555 ? ? ? ? ? ? TYPE_5_PAIR          ?     ? ? 
hydrog96  hydrog ? ? B G  25 N1  ? ? ? 1_555 B C   49 N3  ? ? B G  37  B C   61  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog97  hydrog ? ? B G  25 N2  ? ? ? 1_555 B C   49 O2  ? ? B G  37  B C   61  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog98  hydrog ? ? B G  25 O6  ? ? ? 1_555 B C   49 N4  ? ? B G  37  B C   61  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog99  hydrog ? ? B G  26 N1  ? ? ? 1_555 B C   48 N3  ? ? B G  38  B C   60  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog100 hydrog ? ? B G  26 N2  ? ? ? 1_555 B C   48 O2  ? ? B G  38  B C   60  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog101 hydrog ? ? B G  26 O6  ? ? ? 1_555 B C   48 N4  ? ? B G  38  B C   60  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog102 hydrog ? ? B G  26 N2  ? ? ? 1_555 B A   54 N1  ? ? B G  38  B A   66  1_555 ? ? ? ? ? ? TYPE_10_PAIR         ?     ? ? 
hydrog103 hydrog ? ? B G  26 N3  ? ? ? 1_555 B A   54 N6  ? ? B G  38  B A   66  1_555 ? ? ? ? ? ? TYPE_10_PAIR         ?     ? ? 
hydrog104 hydrog ? ? B G  34 N1  ? ? ? 1_555 B C   41 N3  ? ? B G  46  B C   53  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog105 hydrog ? ? B G  34 N2  ? ? ? 1_555 B C   41 O2  ? ? B G  46  B C   53  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog106 hydrog ? ? B G  34 O6  ? ? ? 1_555 B C   41 N4  ? ? B G  46  B C   53  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog107 hydrog ? ? B U  35 N3  ? ? ? 1_555 B A   40 N1  ? ? B U  47  B A   52  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog108 hydrog ? ? B U  35 O4  ? ? ? 1_555 B A   40 N6  ? ? B U  47  B A   52  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog109 hydrog ? ? B U  36 N3  ? ? ? 1_555 B U   63 O2  ? ? B U  48  B U   75  1_555 ? ? ? ? ? ? 'U-U MISPAIR'        ?     ? ? 
hydrog110 hydrog ? ? B U  37 N3  ? ? ? 1_555 B A   61 N1  ? ? B U  49  B A   73  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog111 hydrog ? ? B U  37 O4  ? ? ? 1_555 B A   61 N6  ? ? B U  49  B A   73  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog112 hydrog ? ? B C  42 N3  ? ? ? 1_555 B G   60 N1  ? ? B C  54  B G   72  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog113 hydrog ? ? B C  42 N4  ? ? ? 1_555 B G   60 O6  ? ? B C  54  B G   72  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog114 hydrog ? ? B C  42 O2  ? ? ? 1_555 B G   60 N2  ? ? B C  54  B G   72  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog115 hydrog ? ? B A  43 N1  ? ? ? 1_555 B U   59 N3  ? ? B A  55  B U   71  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog116 hydrog ? ? B A  43 N6  ? ? ? 1_555 B U   59 O4  ? ? B A  55  B U   71  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog117 hydrog ? ? B A  44 N1  ? ? ? 1_555 B U   58 N3  ? ? B A  56  B U   70  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog118 hydrog ? ? B A  44 N6  ? ? ? 1_555 B U   58 O4  ? ? B A  56  B U   70  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog119 hydrog ? ? B G  45 N1  ? ? ? 1_555 B C   57 N3  ? ? B G  57  B C   69  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog120 hydrog ? ? B G  45 N2  ? ? ? 1_555 B C   57 O2  ? ? B G  57  B C   69  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog121 hydrog ? ? B G  45 O6  ? ? ? 1_555 B C   57 N4  ? ? B G  57  B C   69  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog122 hydrog ? ? B A  46 N1  ? ? ? 1_555 B U   56 N3  ? ? B A  58  B U   68  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog123 hydrog ? ? B A  46 N6  ? ? ? 1_555 B U   56 O4  ? ? B A  58  B U   68  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog124 hydrog ? ? B G  47 N1  ? ? ? 1_555 B C   55 N3  ? ? B G  59  B C   67  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog125 hydrog ? ? B G  47 N2  ? ? ? 1_555 B C   55 O2  ? ? B G  59  B C   67  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog126 hydrog ? ? B G  47 O6  ? ? ? 1_555 B C   55 N4  ? ? B G  59  B C   67  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     ? ? 
hydrog127 hydrog ? ? B C  49 O2  ? ? ? 1_555 B A   53 N6  ? ? B C  61  B A   65  1_555 ? ? ? ? ? ? 'C-A MISPAIR'        ?     ? ? 
# 
loop_
_struct_conn_type.id 
_struct_conn_type.criteria 
_struct_conn_type.reference 
metalc ? ? 
hydrog ? ? 
# 
loop_
_struct_site.id 
_struct_site.pdbx_evidence_code 
_struct_site.pdbx_auth_asym_id 
_struct_site.pdbx_auth_comp_id 
_struct_site.pdbx_auth_seq_id 
_struct_site.pdbx_auth_ins_code 
_struct_site.pdbx_num_residues 
_struct_site.details 
AC1 Software A ADE 101 ? 7 'binding site for residue ADE A 101' 
AC2 Software A MG  102 ? 6 'binding site for residue MG A 102'  
AC3 Software A MG  103 ? 7 'binding site for residue MG A 103'  
AC4 Software B MG  101 ? 4 'binding site for residue MG B 101'  
# 
loop_
_struct_site_gen.id 
_struct_site_gen.site_id 
_struct_site_gen.pdbx_num_res 
_struct_site_gen.label_comp_id 
_struct_site_gen.label_asym_id 
_struct_site_gen.label_seq_id 
_struct_site_gen.pdbx_auth_ins_code 
_struct_site_gen.auth_comp_id 
_struct_site_gen.auth_asym_id 
_struct_site_gen.auth_seq_id 
_struct_site_gen.label_atom_id 
_struct_site_gen.label_alt_id 
_struct_site_gen.symmetry 
_struct_site_gen.details 
1  AC1 7 A   A 9  ? A   A 21  . ? 1_555 ? 
2  AC1 7 U   A 10 ? U   A 22  . ? 1_555 ? 
3  AC1 7 U   A 36 ? U   A 48  . ? 1_555 ? 
4  AC1 7 U   A 37 ? U   A 49  . ? 1_555 ? 
5  AC1 7 A   A 61 ? A   A 73  . ? 1_555 ? 
6  AC1 7 U   A 62 ? U   A 74  . ? 1_555 ? 
7  AC1 7 HOH G .  ? HOH A 204 . ? 1_555 ? 
8  AC2 6 G   A 25 ? G   A 37  . ? 1_555 ? 
9  AC2 6 HOH G .  ? HOH A 205 . ? 1_555 ? 
10 AC2 6 HOH G .  ? HOH A 206 . ? 1_555 ? 
11 AC2 6 U   B 56 ? U   B 68  . ? 1_555 ? 
12 AC2 6 HOH H .  ? HOH B 204 . ? 1_555 ? 
13 AC2 6 HOH H .  ? HOH B 207 . ? 1_555 ? 
14 AC3 7 U   A 39 ? U   A 51  . ? 1_555 ? 
15 AC3 7 A   A 40 ? A   A 52  . ? 1_555 ? 
16 AC3 7 HOH G .  ? HOH A 201 . ? 1_555 ? 
17 AC3 7 HOH G .  ? HOH A 207 . ? 1_555 ? 
18 AC3 7 HOH H .  ? HOH B 205 . ? 1_555 ? 
19 AC3 7 HOH H .  ? HOH B 206 . ? 1_555 ? 
20 AC3 7 HOH H .  ? HOH B 208 . ? 1_455 ? 
21 AC4 4 A   B 12 ? A   B 24  . ? 1_555 ? 
22 AC4 4 HOH H .  ? HOH B 201 . ? 1_555 ? 
23 AC4 4 HOH H .  ? HOH B 202 . ? 1_555 ? 
24 AC4 4 HOH H .  ? HOH B 203 . ? 1_555 ? 
# 
_atom_sites.entry_id                    5SWD 
_atom_sites.fract_transf_matrix[1][1]   0.020872 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.001482 
_atom_sites.fract_transf_matrix[2][1]   -0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.021404 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   -0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.010867 
_atom_sites.fract_transf_vector[1]      0.000000 
_atom_sites.fract_transf_vector[2]      0.000000 
_atom_sites.fract_transf_vector[3]      0.000000 
# 
loop_
_atom_type.symbol 
C  
MG 
N  
O  
P  
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  G 1  13 13 G G A . n 
A 1 2  G 2  14 14 G G A . n 
A 1 3  G 3  15 15 G G A . n 
A 1 4  A 4  16 16 A A A . n 
A 1 5  A 5  17 17 A A A . n 
A 1 6  G 6  18 18 G G A . n 
A 1 7  A 7  19 19 A A A . n 
A 1 8  U 8  20 20 U U A . n 
A 1 9  A 9  21 21 A A A . n 
A 1 10 U 10 22 22 U U A . n 
A 1 11 A 11 23 23 A A A . n 
A 1 12 A 12 24 24 A A A . n 
A 1 13 U 13 25 25 U U A . n 
A 1 14 C 14 26 26 C C A . n 
A 1 15 C 15 27 27 C C A . n 
A 1 16 U 16 28 28 U U A . n 
A 1 17 A 17 29 29 A A A . n 
A 1 18 A 18 30 30 A A A . n 
A 1 19 U 19 31 31 U U A . n 
A 1 20 G 20 32 32 G G A . n 
A 1 21 A 21 33 33 A A A . n 
A 1 22 U 22 34 34 U U A . n 
A 1 23 A 23 35 35 A A A . n 
A 1 24 U 24 36 36 U U A . n 
A 1 25 G 25 37 37 G G A . n 
A 1 26 G 26 38 38 G G A . n 
A 1 27 U 27 39 39 U U A . n 
A 1 28 U 28 40 40 U U A . n 
A 1 29 U 29 41 41 U U A . n 
A 1 30 G 30 42 42 G G A . n 
A 1 31 G 31 43 43 G G A . n 
A 1 32 G 32 44 44 G G A . n 
A 1 33 A 33 45 45 A A A . n 
A 1 34 G 34 46 46 G G A . n 
A 1 35 U 35 47 47 U U A . n 
A 1 36 U 36 48 48 U U A . n 
A 1 37 U 37 49 49 U U A . n 
A 1 38 C 38 50 50 C C A . n 
A 1 39 U 39 51 51 U U A . n 
A 1 40 A 40 52 52 A A A . n 
A 1 41 C 41 53 53 C C A . n 
A 1 42 C 42 54 54 C C A . n 
A 1 43 A 43 55 55 A A A . n 
A 1 44 A 44 56 56 A A A . n 
A 1 45 G 45 57 57 G G A . n 
A 1 46 A 46 58 58 A A A . n 
A 1 47 G 47 59 59 G G A . n 
A 1 48 C 48 60 60 C C A . n 
A 1 49 C 49 61 61 C C A . n 
A 1 50 U 50 62 62 U U A . n 
A 1 51 U 51 63 63 U U A . n 
A 1 52 A 52 64 64 A A A . n 
A 1 53 A 53 65 65 A A A . n 
A 1 54 A 54 66 66 A A A . n 
A 1 55 C 55 67 67 C C A . n 
A 1 56 U 56 68 68 U U A . n 
A 1 57 C 57 69 69 C C A . n 
A 1 58 U 58 70 70 U U A . n 
A 1 59 U 59 71 71 U U A . n 
A 1 60 G 60 72 72 G G A . n 
A 1 61 A 61 73 73 A A A . n 
A 1 62 U 62 74 74 U U A . n 
A 1 63 U 63 75 75 U U A . n 
A 1 64 A 64 76 76 A A A . n 
A 1 65 U 65 77 77 U U A . n 
A 1 66 C 66 78 ?  ? ? A . n 
A 1 67 U 67 79 ?  ? ? A . n 
A 1 68 U 68 80 ?  ? ? A . n 
A 1 69 C 69 81 ?  ? ? A . n 
A 1 70 C 70 82 ?  ? ? A . n 
A 1 71 C 71 83 ?  ? ? A . n 
B 1 1  G 1  13 13 G G B . n 
B 1 2  G 2  14 14 G G B . n 
B 1 3  G 3  15 15 G G B . n 
B 1 4  A 4  16 16 A A B . n 
B 1 5  A 5  17 17 A A B . n 
B 1 6  G 6  18 18 G G B . n 
B 1 7  A 7  19 19 A A B . n 
B 1 8  U 8  20 20 U U B . n 
B 1 9  A 9  21 21 A A B . n 
B 1 10 U 10 22 22 U U B . n 
B 1 11 A 11 23 23 A A B . n 
B 1 12 A 12 24 24 A A B . n 
B 1 13 U 13 25 25 U U B . n 
B 1 14 C 14 26 26 C C B . n 
B 1 15 C 15 27 27 C C B . n 
B 1 16 U 16 28 28 U U B . n 
B 1 17 A 17 29 29 A A B . n 
B 1 18 A 18 30 30 A A B . n 
B 1 19 U 19 31 31 U U B . n 
B 1 20 G 20 32 32 G G B . n 
B 1 21 A 21 33 33 A A B . n 
B 1 22 U 22 34 34 U U B . n 
B 1 23 A 23 35 35 A A B . n 
B 1 24 U 24 36 36 U U B . n 
B 1 25 G 25 37 37 G G B . n 
B 1 26 G 26 38 38 G G B . n 
B 1 27 U 27 39 39 U U B . n 
B 1 28 U 28 40 40 U U B . n 
B 1 29 U 29 41 41 U U B . n 
B 1 30 G 30 42 42 G G B . n 
B 1 31 G 31 43 43 G G B . n 
B 1 32 G 32 44 44 G G B . n 
B 1 33 A 33 45 45 A A B . n 
B 1 34 G 34 46 46 G G B . n 
B 1 35 U 35 47 47 U U B . n 
B 1 36 U 36 48 48 U U B . n 
B 1 37 U 37 49 49 U U B . n 
B 1 38 C 38 50 50 C C B . n 
B 1 39 U 39 51 51 U U B . n 
B 1 40 A 40 52 52 A A B . n 
B 1 41 C 41 53 53 C C B . n 
B 1 42 C 42 54 54 C C B . n 
B 1 43 A 43 55 55 A A B . n 
B 1 44 A 44 56 56 A A B . n 
B 1 45 G 45 57 57 G G B . n 
B 1 46 A 46 58 58 A A B . n 
B 1 47 G 47 59 59 G G B . n 
B 1 48 C 48 60 60 C C B . n 
B 1 49 C 49 61 61 C C B . n 
B 1 50 U 50 62 62 U U B . n 
B 1 51 U 51 63 63 U U B . n 
B 1 52 A 52 64 64 A A B . n 
B 1 53 A 53 65 65 A A B . n 
B 1 54 A 54 66 66 A A B . n 
B 1 55 C 55 67 67 C C B . n 
B 1 56 U 56 68 68 U U B . n 
B 1 57 C 57 69 69 C C B . n 
B 1 58 U 58 70 70 U U B . n 
B 1 59 U 59 71 71 U U B . n 
B 1 60 G 60 72 72 G G B . n 
B 1 61 A 61 73 73 A A B . n 
B 1 62 U 62 74 74 U U B . n 
B 1 63 U 63 75 75 U U B . n 
B 1 64 A 64 76 76 A A B . n 
B 1 65 U 65 77 77 U U B . n 
B 1 66 C 66 78 78 C C B . n 
B 1 67 U 67 79 79 U U B . n 
B 1 68 U 68 80 80 U U B . n 
B 1 69 C 69 81 ?  ? ? B . n 
B 1 70 C 70 82 ?  ? ? B . n 
B 1 71 C 71 83 ?  ? ? B . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
C 2 ADE 1 101 101 ADE A   A . 
D 3 MG  1 102 1   MG  MG  A . 
E 3 MG  1 103 2   MG  MG  A . 
F 3 MG  1 101 3   MG  MG  B . 
G 4 HOH 1 201 6   HOH HOH A . 
G 4 HOH 2 202 11  HOH HOH A . 
G 4 HOH 3 203 15  HOH HOH A . 
G 4 HOH 4 204 12  HOH HOH A . 
G 4 HOH 5 205 2   HOH HOH A . 
G 4 HOH 6 206 10  HOH HOH A . 
G 4 HOH 7 207 7   HOH HOH A . 
H 4 HOH 1 201 9   HOH HOH B . 
H 4 HOH 2 202 14  HOH HOH B . 
H 4 HOH 3 203 13  HOH HOH B . 
H 4 HOH 4 204 3   HOH HOH B . 
H 4 HOH 5 205 5   HOH HOH B . 
H 4 HOH 6 206 4   HOH HOH B . 
H 4 HOH 7 207 1   HOH HOH B . 
H 4 HOH 8 208 8   HOH HOH B . 
# 
loop_
_pdbx_struct_assembly.id 
_pdbx_struct_assembly.details 
_pdbx_struct_assembly.method_details 
_pdbx_struct_assembly.oligomeric_details 
_pdbx_struct_assembly.oligomeric_count 
1 author_defined_assembly ? monomeric 1 
2 author_defined_assembly ? monomeric 1 
# 
loop_
_pdbx_struct_assembly_gen.assembly_id 
_pdbx_struct_assembly_gen.oper_expression 
_pdbx_struct_assembly_gen.asym_id_list 
1 1 A,C,D,E,G 
2 1 B,F,H     
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
loop_
_pdbx_struct_conn_angle.id 
_pdbx_struct_conn_angle.ptnr1_label_atom_id 
_pdbx_struct_conn_angle.ptnr1_label_alt_id 
_pdbx_struct_conn_angle.ptnr1_label_asym_id 
_pdbx_struct_conn_angle.ptnr1_label_comp_id 
_pdbx_struct_conn_angle.ptnr1_label_seq_id 
_pdbx_struct_conn_angle.ptnr1_auth_atom_id 
_pdbx_struct_conn_angle.ptnr1_auth_asym_id 
_pdbx_struct_conn_angle.ptnr1_auth_comp_id 
_pdbx_struct_conn_angle.ptnr1_auth_seq_id 
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr1_symmetry 
_pdbx_struct_conn_angle.ptnr2_label_atom_id 
_pdbx_struct_conn_angle.ptnr2_label_alt_id 
_pdbx_struct_conn_angle.ptnr2_label_asym_id 
_pdbx_struct_conn_angle.ptnr2_label_comp_id 
_pdbx_struct_conn_angle.ptnr2_label_seq_id 
_pdbx_struct_conn_angle.ptnr2_auth_atom_id 
_pdbx_struct_conn_angle.ptnr2_auth_asym_id 
_pdbx_struct_conn_angle.ptnr2_auth_comp_id 
_pdbx_struct_conn_angle.ptnr2_auth_seq_id 
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr2_symmetry 
_pdbx_struct_conn_angle.ptnr3_label_atom_id 
_pdbx_struct_conn_angle.ptnr3_label_alt_id 
_pdbx_struct_conn_angle.ptnr3_label_asym_id 
_pdbx_struct_conn_angle.ptnr3_label_comp_id 
_pdbx_struct_conn_angle.ptnr3_label_seq_id 
_pdbx_struct_conn_angle.ptnr3_auth_atom_id 
_pdbx_struct_conn_angle.ptnr3_auth_asym_id 
_pdbx_struct_conn_angle.ptnr3_auth_comp_id 
_pdbx_struct_conn_angle.ptnr3_auth_seq_id 
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr3_symmetry 
_pdbx_struct_conn_angle.value 
_pdbx_struct_conn_angle.value_esd 
1  OP1 ? A G   25 ? A G   37  ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O   ? G HOH .  ? A HOH 205 ? 1_555 76.1  ? 
2  OP1 ? A G   25 ? A G   37  ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O   ? G HOH .  ? A HOH 206 ? 1_555 103.7 ? 
3  O   ? G HOH .  ? A HOH 205 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O   ? G HOH .  ? A HOH 206 ? 1_555 73.5  ? 
4  OP1 ? A G   25 ? A G   37  ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 OP1 ? B U   56 ? B U   68  ? 1_555 90.5  ? 
5  O   ? G HOH .  ? A HOH 205 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 OP1 ? B U   56 ? B U   68  ? 1_555 77.5  ? 
6  O   ? G HOH .  ? A HOH 206 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 OP1 ? B U   56 ? B U   68  ? 1_555 143.4 ? 
7  OP1 ? A G   25 ? A G   37  ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O   ? H HOH .  ? B HOH 204 ? 1_555 166.1 ? 
8  O   ? G HOH .  ? A HOH 205 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O   ? H HOH .  ? B HOH 204 ? 1_555 92.8  ? 
9  O   ? G HOH .  ? A HOH 206 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O   ? H HOH .  ? B HOH 204 ? 1_555 80.8  ? 
10 OP1 ? B U   56 ? B U   68  ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O   ? H HOH .  ? B HOH 204 ? 1_555 78.7  ? 
11 OP1 ? A G   25 ? A G   37  ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O   ? H HOH .  ? B HOH 207 ? 1_555 85.7  ? 
12 O   ? G HOH .  ? A HOH 205 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O   ? H HOH .  ? B HOH 207 ? 1_555 152.5 ? 
13 O   ? G HOH .  ? A HOH 206 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O   ? H HOH .  ? B HOH 207 ? 1_555 131.7 ? 
14 OP1 ? B U   56 ? B U   68  ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O   ? H HOH .  ? B HOH 207 ? 1_555 82.3  ? 
15 O   ? H HOH .  ? B HOH 204 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O   ? H HOH .  ? B HOH 207 ? 1_555 101.3 ? 
16 OP1 ? A A   40 ? A A   52  ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O   ? G HOH .  ? A HOH 201 ? 1_555 82.5  ? 
17 OP1 ? A A   40 ? A A   52  ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O   ? G HOH .  ? A HOH 207 ? 1_555 109.3 ? 
18 O   ? G HOH .  ? A HOH 201 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O   ? G HOH .  ? A HOH 207 ? 1_555 72.1  ? 
19 OP1 ? A A   40 ? A A   52  ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O   ? H HOH .  ? B HOH 205 ? 1_555 87.4  ? 
20 O   ? G HOH .  ? A HOH 201 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O   ? H HOH .  ? B HOH 205 ? 1_555 86.7  ? 
21 O   ? G HOH .  ? A HOH 207 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O   ? H HOH .  ? B HOH 205 ? 1_555 150.5 ? 
22 OP1 ? A A   40 ? A A   52  ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O   ? H HOH .  ? B HOH 206 ? 1_555 152.4 ? 
23 O   ? G HOH .  ? A HOH 201 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O   ? H HOH .  ? B HOH 206 ? 1_555 75.7  ? 
24 O   ? G HOH .  ? A HOH 207 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O   ? H HOH .  ? B HOH 206 ? 1_555 80.1  ? 
25 O   ? H HOH .  ? B HOH 205 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O   ? H HOH .  ? B HOH 206 ? 1_555 74.8  ? 
26 OP1 ? A A   40 ? A A   52  ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O   ? H HOH .  ? B HOH 208 ? 1_455 128.6 ? 
27 O   ? G HOH .  ? A HOH 201 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O   ? H HOH .  ? B HOH 208 ? 1_455 146.5 ? 
28 O   ? G HOH .  ? A HOH 207 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O   ? H HOH .  ? B HOH 208 ? 1_455 84.2  ? 
29 O   ? H HOH .  ? B HOH 205 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O   ? H HOH .  ? B HOH 208 ? 1_455 104.7 ? 
30 O   ? H HOH .  ? B HOH 206 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O   ? H HOH .  ? B HOH 208 ? 1_455 77.2  ? 
31 OP2 ? B A   12 ? B A   24  ? 1_555 MG ? F MG . ? B MG 101 ? 1_555 O   ? H HOH .  ? B HOH 201 ? 1_555 157.5 ? 
32 OP2 ? B A   12 ? B A   24  ? 1_555 MG ? F MG . ? B MG 101 ? 1_555 O   ? H HOH .  ? B HOH 202 ? 1_555 73.8  ? 
33 O   ? H HOH .  ? B HOH 201 ? 1_555 MG ? F MG . ? B MG 101 ? 1_555 O   ? H HOH .  ? B HOH 202 ? 1_555 84.0  ? 
34 OP2 ? B A   12 ? B A   24  ? 1_555 MG ? F MG . ? B MG 101 ? 1_555 O   ? H HOH .  ? B HOH 203 ? 1_555 103.0 ? 
35 O   ? H HOH .  ? B HOH 201 ? 1_555 MG ? F MG . ? B MG 101 ? 1_555 O   ? H HOH .  ? B HOH 203 ? 1_555 71.0  ? 
36 O   ? H HOH .  ? B HOH 202 ? 1_555 MG ? F MG . ? B MG 101 ? 1_555 O   ? H HOH .  ? B HOH 203 ? 1_555 86.7  ? 
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2016-11-23 
2 'Structure model' 1 1 2017-01-25 
3 'Structure model' 1 2 2017-10-11 
4 'Structure model' 1 3 2018-02-14 
5 'Structure model' 1 4 2023-08-30 
6 'Structure model' 1 5 2023-10-04 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1  2 'Structure model' 'Data collection'        
2  2 'Structure model' 'Database references'    
3  3 'Structure model' 'Data collection'        
4  4 'Structure model' 'Data collection'        
5  5 'Structure model' 'Data collection'        
6  5 'Structure model' 'Database references'    
7  5 'Structure model' 'Derived calculations'   
8  5 'Structure model' 'Refinement description' 
9  5 'Structure model' 'Structure summary'      
10 6 'Structure model' 'Refinement description' 
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1  3 'Structure model' reflns                        
2  3 'Structure model' reflns_shell                  
3  4 'Structure model' diffrn_source                 
4  5 'Structure model' audit_author                  
5  5 'Structure model' chem_comp_atom                
6  5 'Structure model' chem_comp_bond                
7  5 'Structure model' citation_author               
8  5 'Structure model' database_2                    
9  5 'Structure model' diffrn_radiation_wavelength   
10 5 'Structure model' pdbx_struct_conn_angle        
11 5 'Structure model' struct_conn                   
12 5 'Structure model' struct_ncs_dom_lim            
13 6 'Structure model' pdbx_initial_refinement_model 
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1  3 'Structure model' '_reflns.pdbx_R_split'                        
2  3 'Structure model' '_reflns_shell.pdbx_R_split'                  
3  4 'Structure model' '_diffrn_source.pdbx_synchrotron_site'        
4  5 'Structure model' '_audit_author.identifier_ORCID'              
5  5 'Structure model' '_citation_author.identifier_ORCID'           
6  5 'Structure model' '_database_2.pdbx_DOI'                        
7  5 'Structure model' '_database_2.pdbx_database_accession'         
8  5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id'  
9  5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id'  
10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'   
11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 
12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 
13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 
14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id'  
15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id'  
16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id'  
17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'   
18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 
19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 
20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 
21 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id'  
22 5 'Structure model' '_pdbx_struct_conn_angle.value'               
23 5 'Structure model' '_struct_conn.pdbx_dist_value'                
24 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id'             
25 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id'             
26 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id'              
27 5 'Structure model' '_struct_conn.ptnr1_label_asym_id'            
28 5 'Structure model' '_struct_conn.ptnr1_label_atom_id'            
29 5 'Structure model' '_struct_conn.ptnr1_label_comp_id'            
30 5 'Structure model' '_struct_conn.ptnr1_label_seq_id'             
31 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id'             
32 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id'             
33 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id'              
34 5 'Structure model' '_struct_conn.ptnr2_label_asym_id'            
35 5 'Structure model' '_struct_conn.ptnr2_label_atom_id'            
36 5 'Structure model' '_struct_conn.ptnr2_label_comp_id'            
37 5 'Structure model' '_struct_conn.ptnr2_label_seq_id'             
38 5 'Structure model' '_struct_conn.ptnr2_symmetry'                 
39 5 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id'        
40 5 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id'       
41 5 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id'       
42 5 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id'        
43 5 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id'        
44 5 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id'       
45 5 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id'       
46 5 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id'        
# 
loop_
_pdbx_refine_tls.pdbx_refine_id 
_pdbx_refine_tls.id 
_pdbx_refine_tls.details 
_pdbx_refine_tls.method 
_pdbx_refine_tls.origin_x 
_pdbx_refine_tls.origin_y 
_pdbx_refine_tls.origin_z 
_pdbx_refine_tls.T[1][1] 
_pdbx_refine_tls.T[2][2] 
_pdbx_refine_tls.T[3][3] 
_pdbx_refine_tls.T[1][2] 
_pdbx_refine_tls.T[1][3] 
_pdbx_refine_tls.T[2][3] 
_pdbx_refine_tls.L[1][1] 
_pdbx_refine_tls.L[2][2] 
_pdbx_refine_tls.L[3][3] 
_pdbx_refine_tls.L[1][2] 
_pdbx_refine_tls.L[1][3] 
_pdbx_refine_tls.L[2][3] 
_pdbx_refine_tls.S[1][1] 
_pdbx_refine_tls.S[2][2] 
_pdbx_refine_tls.S[3][3] 
_pdbx_refine_tls.S[1][2] 
_pdbx_refine_tls.S[1][3] 
_pdbx_refine_tls.S[2][3] 
_pdbx_refine_tls.S[2][1] 
_pdbx_refine_tls.S[3][1] 
_pdbx_refine_tls.S[3][2] 
'X-RAY DIFFRACTION' 1 ? refined -2.7437 -0.0121  28.5524 0.0941 0.1413 0.1033 0.0387 -0.0269 0.0757  3.0175 1.3655 1.1423 -0.0517 
-0.6103 0.4111  0.0841 -0.1055 0.0214 0.5586 0.4289  0.1040 -0.2960 -0.2571 -0.1125 
'X-RAY DIFFRACTION' 2 ? refined 7.0972  -21.2493 23.2953 0.0746 0.2179 0.0848 0.0071 -0.0078 -0.1153 3.3817 1.4932 0.8662 -0.1576 
-0.2733 -0.3329 0.0045 -0.0186 0.0142 0.7867 -0.4591 0.0152 -0.3224 0.0843  -0.0418 
# 
loop_
_pdbx_refine_tls_group.pdbx_refine_id 
_pdbx_refine_tls_group.id 
_pdbx_refine_tls_group.refine_tls_id 
_pdbx_refine_tls_group.beg_auth_asym_id 
_pdbx_refine_tls_group.beg_auth_seq_id 
_pdbx_refine_tls_group.end_auth_asym_id 
_pdbx_refine_tls_group.end_auth_seq_id 
_pdbx_refine_tls_group.selection_details 
_pdbx_refine_tls_group.beg_label_asym_id 
_pdbx_refine_tls_group.beg_label_seq_id 
_pdbx_refine_tls_group.end_label_asym_id 
_pdbx_refine_tls_group.end_label_seq_id 
_pdbx_refine_tls_group.selection 
'X-RAY DIFFRACTION' 1 1 A 13 A 77 ? ? ? ? ? ? 
'X-RAY DIFFRACTION' 2 2 B 13 B 80 ? ? ? ? ? ? 
# 
loop_
_software.citation_id 
_software.classification 
_software.compiler_name 
_software.compiler_version 
_software.contact_author 
_software.contact_author_email 
_software.date 
_software.description 
_software.dependencies 
_software.hardware 
_software.language 
_software.location 
_software.mods 
_software.name 
_software.os 
_software.os_version 
_software.type 
_software.version 
_software.pdbx_ordinal 
? refinement        ? ? ? ? ? ? ? ? ? ? ? REFMAC      ? ? ? 5.8.0073 1 
? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.20     2 
? 'data reduction'  ? ? ? ? ? ? ? ? ? ? ? CrystFEL    ? ? ? 0.6.2    3 
? 'data scaling'    ? ? ? ? ? ? ? ? ? ? ? CrystFEL    ? ? ? 0.6.2    4 
? phasing           ? ? ? ? ? ? ? ? ? ? ? PHASER      ? ? ? .        5 
# 
loop_
_pdbx_validate_rmsd_bond.id 
_pdbx_validate_rmsd_bond.PDB_model_num 
_pdbx_validate_rmsd_bond.auth_atom_id_1 
_pdbx_validate_rmsd_bond.auth_asym_id_1 
_pdbx_validate_rmsd_bond.auth_comp_id_1 
_pdbx_validate_rmsd_bond.auth_seq_id_1 
_pdbx_validate_rmsd_bond.PDB_ins_code_1 
_pdbx_validate_rmsd_bond.label_alt_id_1 
_pdbx_validate_rmsd_bond.auth_atom_id_2 
_pdbx_validate_rmsd_bond.auth_asym_id_2 
_pdbx_validate_rmsd_bond.auth_comp_id_2 
_pdbx_validate_rmsd_bond.auth_seq_id_2 
_pdbx_validate_rmsd_bond.PDB_ins_code_2 
_pdbx_validate_rmsd_bond.label_alt_id_2 
_pdbx_validate_rmsd_bond.bond_value 
_pdbx_validate_rmsd_bond.bond_target_value 
_pdbx_validate_rmsd_bond.bond_deviation 
_pdbx_validate_rmsd_bond.bond_standard_deviation 
_pdbx_validate_rmsd_bond.linker_flag 
1 1 P A G 13 ? ? OP3 A G 13 ? ? 1.485 1.607 -0.122 0.012 N 
2 1 P B G 13 ? ? OP3 B G 13 ? ? 1.490 1.607 -0.117 0.012 N 
# 
loop_
_pdbx_unobs_or_zero_occ_residues.id 
_pdbx_unobs_or_zero_occ_residues.PDB_model_num 
_pdbx_unobs_or_zero_occ_residues.polymer_flag 
_pdbx_unobs_or_zero_occ_residues.occupancy_flag 
_pdbx_unobs_or_zero_occ_residues.auth_asym_id 
_pdbx_unobs_or_zero_occ_residues.auth_comp_id 
_pdbx_unobs_or_zero_occ_residues.auth_seq_id 
_pdbx_unobs_or_zero_occ_residues.PDB_ins_code 
_pdbx_unobs_or_zero_occ_residues.label_asym_id 
_pdbx_unobs_or_zero_occ_residues.label_comp_id 
_pdbx_unobs_or_zero_occ_residues.label_seq_id 
1 1 Y 1 A C 78 ? A C 66 
2 1 Y 1 A U 79 ? A U 67 
3 1 Y 1 A U 80 ? A U 68 
4 1 Y 1 A C 81 ? A C 69 
5 1 Y 1 A C 82 ? A C 70 
6 1 Y 1 A C 83 ? A C 71 
7 1 Y 1 B C 81 ? B C 69 
8 1 Y 1 B C 82 ? B C 70 
9 1 Y 1 B C 83 ? B C 71 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
A   OP3    O  N N 1   
A   P      P  N N 2   
A   OP1    O  N N 3   
A   OP2    O  N N 4   
A   "O5'"  O  N N 5   
A   "C5'"  C  N N 6   
A   "C4'"  C  N R 7   
A   "O4'"  O  N N 8   
A   "C3'"  C  N S 9   
A   "O3'"  O  N N 10  
A   "C2'"  C  N R 11  
A   "O2'"  O  N N 12  
A   "C1'"  C  N R 13  
A   N9     N  Y N 14  
A   C8     C  Y N 15  
A   N7     N  Y N 16  
A   C5     C  Y N 17  
A   C6     C  Y N 18  
A   N6     N  N N 19  
A   N1     N  Y N 20  
A   C2     C  Y N 21  
A   N3     N  Y N 22  
A   C4     C  Y N 23  
A   HOP3   H  N N 24  
A   HOP2   H  N N 25  
A   "H5'"  H  N N 26  
A   "H5''" H  N N 27  
A   "H4'"  H  N N 28  
A   "H3'"  H  N N 29  
A   "HO3'" H  N N 30  
A   "H2'"  H  N N 31  
A   "HO2'" H  N N 32  
A   "H1'"  H  N N 33  
A   H8     H  N N 34  
A   H61    H  N N 35  
A   H62    H  N N 36  
A   H2     H  N N 37  
ADE N9     N  Y N 38  
ADE C8     C  Y N 39  
ADE N7     N  Y N 40  
ADE C5     C  Y N 41  
ADE C6     C  Y N 42  
ADE N6     N  N N 43  
ADE N1     N  Y N 44  
ADE C2     C  Y N 45  
ADE N3     N  Y N 46  
ADE C4     C  Y N 47  
ADE HN9    H  N N 48  
ADE H8     H  N N 49  
ADE HN61   H  N N 50  
ADE HN62   H  N N 51  
ADE H2     H  N N 52  
C   OP3    O  N N 53  
C   P      P  N N 54  
C   OP1    O  N N 55  
C   OP2    O  N N 56  
C   "O5'"  O  N N 57  
C   "C5'"  C  N N 58  
C   "C4'"  C  N R 59  
C   "O4'"  O  N N 60  
C   "C3'"  C  N S 61  
C   "O3'"  O  N N 62  
C   "C2'"  C  N R 63  
C   "O2'"  O  N N 64  
C   "C1'"  C  N R 65  
C   N1     N  N N 66  
C   C2     C  N N 67  
C   O2     O  N N 68  
C   N3     N  N N 69  
C   C4     C  N N 70  
C   N4     N  N N 71  
C   C5     C  N N 72  
C   C6     C  N N 73  
C   HOP3   H  N N 74  
C   HOP2   H  N N 75  
C   "H5'"  H  N N 76  
C   "H5''" H  N N 77  
C   "H4'"  H  N N 78  
C   "H3'"  H  N N 79  
C   "HO3'" H  N N 80  
C   "H2'"  H  N N 81  
C   "HO2'" H  N N 82  
C   "H1'"  H  N N 83  
C   H41    H  N N 84  
C   H42    H  N N 85  
C   H5     H  N N 86  
C   H6     H  N N 87  
G   OP3    O  N N 88  
G   P      P  N N 89  
G   OP1    O  N N 90  
G   OP2    O  N N 91  
G   "O5'"  O  N N 92  
G   "C5'"  C  N N 93  
G   "C4'"  C  N R 94  
G   "O4'"  O  N N 95  
G   "C3'"  C  N S 96  
G   "O3'"  O  N N 97  
G   "C2'"  C  N R 98  
G   "O2'"  O  N N 99  
G   "C1'"  C  N R 100 
G   N9     N  Y N 101 
G   C8     C  Y N 102 
G   N7     N  Y N 103 
G   C5     C  Y N 104 
G   C6     C  N N 105 
G   O6     O  N N 106 
G   N1     N  N N 107 
G   C2     C  N N 108 
G   N2     N  N N 109 
G   N3     N  N N 110 
G   C4     C  Y N 111 
G   HOP3   H  N N 112 
G   HOP2   H  N N 113 
G   "H5'"  H  N N 114 
G   "H5''" H  N N 115 
G   "H4'"  H  N N 116 
G   "H3'"  H  N N 117 
G   "HO3'" H  N N 118 
G   "H2'"  H  N N 119 
G   "HO2'" H  N N 120 
G   "H1'"  H  N N 121 
G   H8     H  N N 122 
G   H1     H  N N 123 
G   H21    H  N N 124 
G   H22    H  N N 125 
HOH O      O  N N 126 
HOH H1     H  N N 127 
HOH H2     H  N N 128 
MG  MG     MG N N 129 
U   OP3    O  N N 130 
U   P      P  N N 131 
U   OP1    O  N N 132 
U   OP2    O  N N 133 
U   "O5'"  O  N N 134 
U   "C5'"  C  N N 135 
U   "C4'"  C  N R 136 
U   "O4'"  O  N N 137 
U   "C3'"  C  N S 138 
U   "O3'"  O  N N 139 
U   "C2'"  C  N R 140 
U   "O2'"  O  N N 141 
U   "C1'"  C  N R 142 
U   N1     N  N N 143 
U   C2     C  N N 144 
U   O2     O  N N 145 
U   N3     N  N N 146 
U   C4     C  N N 147 
U   O4     O  N N 148 
U   C5     C  N N 149 
U   C6     C  N N 150 
U   HOP3   H  N N 151 
U   HOP2   H  N N 152 
U   "H5'"  H  N N 153 
U   "H5''" H  N N 154 
U   "H4'"  H  N N 155 
U   "H3'"  H  N N 156 
U   "HO3'" H  N N 157 
U   "H2'"  H  N N 158 
U   "HO2'" H  N N 159 
U   "H1'"  H  N N 160 
U   H3     H  N N 161 
U   H5     H  N N 162 
U   H6     H  N N 163 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A   OP3   P      sing N N 1   
A   OP3   HOP3   sing N N 2   
A   P     OP1    doub N N 3   
A   P     OP2    sing N N 4   
A   P     "O5'"  sing N N 5   
A   OP2   HOP2   sing N N 6   
A   "O5'" "C5'"  sing N N 7   
A   "C5'" "C4'"  sing N N 8   
A   "C5'" "H5'"  sing N N 9   
A   "C5'" "H5''" sing N N 10  
A   "C4'" "O4'"  sing N N 11  
A   "C4'" "C3'"  sing N N 12  
A   "C4'" "H4'"  sing N N 13  
A   "O4'" "C1'"  sing N N 14  
A   "C3'" "O3'"  sing N N 15  
A   "C3'" "C2'"  sing N N 16  
A   "C3'" "H3'"  sing N N 17  
A   "O3'" "HO3'" sing N N 18  
A   "C2'" "O2'"  sing N N 19  
A   "C2'" "C1'"  sing N N 20  
A   "C2'" "H2'"  sing N N 21  
A   "O2'" "HO2'" sing N N 22  
A   "C1'" N9     sing N N 23  
A   "C1'" "H1'"  sing N N 24  
A   N9    C8     sing Y N 25  
A   N9    C4     sing Y N 26  
A   C8    N7     doub Y N 27  
A   C8    H8     sing N N 28  
A   N7    C5     sing Y N 29  
A   C5    C6     sing Y N 30  
A   C5    C4     doub Y N 31  
A   C6    N6     sing N N 32  
A   C6    N1     doub Y N 33  
A   N6    H61    sing N N 34  
A   N6    H62    sing N N 35  
A   N1    C2     sing Y N 36  
A   C2    N3     doub Y N 37  
A   C2    H2     sing N N 38  
A   N3    C4     sing Y N 39  
ADE N9    C8     sing Y N 40  
ADE N9    C4     sing Y N 41  
ADE N9    HN9    sing N N 42  
ADE C8    N7     doub Y N 43  
ADE C8    H8     sing N N 44  
ADE N7    C5     sing Y N 45  
ADE C5    C6     sing Y N 46  
ADE C5    C4     doub Y N 47  
ADE C6    N6     sing N N 48  
ADE C6    N1     doub Y N 49  
ADE N6    HN61   sing N N 50  
ADE N6    HN62   sing N N 51  
ADE N1    C2     sing Y N 52  
ADE C2    N3     doub Y N 53  
ADE C2    H2     sing N N 54  
ADE N3    C4     sing Y N 55  
C   OP3   P      sing N N 56  
C   OP3   HOP3   sing N N 57  
C   P     OP1    doub N N 58  
C   P     OP2    sing N N 59  
C   P     "O5'"  sing N N 60  
C   OP2   HOP2   sing N N 61  
C   "O5'" "C5'"  sing N N 62  
C   "C5'" "C4'"  sing N N 63  
C   "C5'" "H5'"  sing N N 64  
C   "C5'" "H5''" sing N N 65  
C   "C4'" "O4'"  sing N N 66  
C   "C4'" "C3'"  sing N N 67  
C   "C4'" "H4'"  sing N N 68  
C   "O4'" "C1'"  sing N N 69  
C   "C3'" "O3'"  sing N N 70  
C   "C3'" "C2'"  sing N N 71  
C   "C3'" "H3'"  sing N N 72  
C   "O3'" "HO3'" sing N N 73  
C   "C2'" "O2'"  sing N N 74  
C   "C2'" "C1'"  sing N N 75  
C   "C2'" "H2'"  sing N N 76  
C   "O2'" "HO2'" sing N N 77  
C   "C1'" N1     sing N N 78  
C   "C1'" "H1'"  sing N N 79  
C   N1    C2     sing N N 80  
C   N1    C6     sing N N 81  
C   C2    O2     doub N N 82  
C   C2    N3     sing N N 83  
C   N3    C4     doub N N 84  
C   C4    N4     sing N N 85  
C   C4    C5     sing N N 86  
C   N4    H41    sing N N 87  
C   N4    H42    sing N N 88  
C   C5    C6     doub N N 89  
C   C5    H5     sing N N 90  
C   C6    H6     sing N N 91  
G   OP3   P      sing N N 92  
G   OP3   HOP3   sing N N 93  
G   P     OP1    doub N N 94  
G   P     OP2    sing N N 95  
G   P     "O5'"  sing N N 96  
G   OP2   HOP2   sing N N 97  
G   "O5'" "C5'"  sing N N 98  
G   "C5'" "C4'"  sing N N 99  
G   "C5'" "H5'"  sing N N 100 
G   "C5'" "H5''" sing N N 101 
G   "C4'" "O4'"  sing N N 102 
G   "C4'" "C3'"  sing N N 103 
G   "C4'" "H4'"  sing N N 104 
G   "O4'" "C1'"  sing N N 105 
G   "C3'" "O3'"  sing N N 106 
G   "C3'" "C2'"  sing N N 107 
G   "C3'" "H3'"  sing N N 108 
G   "O3'" "HO3'" sing N N 109 
G   "C2'" "O2'"  sing N N 110 
G   "C2'" "C1'"  sing N N 111 
G   "C2'" "H2'"  sing N N 112 
G   "O2'" "HO2'" sing N N 113 
G   "C1'" N9     sing N N 114 
G   "C1'" "H1'"  sing N N 115 
G   N9    C8     sing Y N 116 
G   N9    C4     sing Y N 117 
G   C8    N7     doub Y N 118 
G   C8    H8     sing N N 119 
G   N7    C5     sing Y N 120 
G   C5    C6     sing N N 121 
G   C5    C4     doub Y N 122 
G   C6    O6     doub N N 123 
G   C6    N1     sing N N 124 
G   N1    C2     sing N N 125 
G   N1    H1     sing N N 126 
G   C2    N2     sing N N 127 
G   C2    N3     doub N N 128 
G   N2    H21    sing N N 129 
G   N2    H22    sing N N 130 
G   N3    C4     sing N N 131 
HOH O     H1     sing N N 132 
HOH O     H2     sing N N 133 
U   OP3   P      sing N N 134 
U   OP3   HOP3   sing N N 135 
U   P     OP1    doub N N 136 
U   P     OP2    sing N N 137 
U   P     "O5'"  sing N N 138 
U   OP2   HOP2   sing N N 139 
U   "O5'" "C5'"  sing N N 140 
U   "C5'" "C4'"  sing N N 141 
U   "C5'" "H5'"  sing N N 142 
U   "C5'" "H5''" sing N N 143 
U   "C4'" "O4'"  sing N N 144 
U   "C4'" "C3'"  sing N N 145 
U   "C4'" "H4'"  sing N N 146 
U   "O4'" "C1'"  sing N N 147 
U   "C3'" "O3'"  sing N N 148 
U   "C3'" "C2'"  sing N N 149 
U   "C3'" "H3'"  sing N N 150 
U   "O3'" "HO3'" sing N N 151 
U   "C2'" "O2'"  sing N N 152 
U   "C2'" "C1'"  sing N N 153 
U   "C2'" "H2'"  sing N N 154 
U   "O2'" "HO2'" sing N N 155 
U   "C1'" N1     sing N N 156 
U   "C1'" "H1'"  sing N N 157 
U   N1    C2     sing N N 158 
U   N1    C6     sing N N 159 
U   C2    O2     doub N N 160 
U   C2    N3     sing N N 161 
U   N3    C4     sing N N 162 
U   N3    H3     sing N N 163 
U   C4    O4     doub N N 164 
U   C4    C5     sing N N 165 
U   C5    C6     doub N N 166 
U   C5    H5     sing N N 167 
U   C6    H6     sing N N 168 
# 
loop_
_ndb_struct_conf_na.entry_id 
_ndb_struct_conf_na.feature 
5SWD 'double helix'         
5SWD 'a-form double helix'  
5SWD 'hairpin loop'         
5SWD 'mismatched base pair' 
5SWD 'internal loop'        
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A A 7  1_555 A U 65 1_555 -0.742 0.230  -1.835 -24.700 -12.410 -3.302   1  A_A19:U77_A A 19 ? A 77 ? ?  ? 
1 A U 8  1_555 A A 64 1_555 -0.326 -0.174 -0.003 -2.413  -10.037 0.043    2  A_U20:A76_A A 20 ? A 76 ? 20 1 
1 A A 9  1_555 A U 63 1_555 -0.263 -0.327 0.973  13.373  -4.474  -3.605   3  A_A21:U75_A A 21 ? A 75 ? 20 1 
1 A U 27 1_555 A U 19 1_555 -2.532 -1.950 0.303  -2.956  -20.084 16.208   4  A_U39:U31_A A 39 ? A 31 ? 16 1 
1 A U 28 1_555 A A 18 1_555 0.022  -0.238 0.074  -9.796  -11.921 5.875    5  A_U40:A30_A A 40 ? A 30 ? 20 1 
1 A U 29 1_555 A A 17 1_555 0.095  -0.296 -0.002 1.405   -5.735  2.564    6  A_U41:A29_A A 41 ? A 29 ? 20 1 
1 A G 30 1_555 A U 16 1_555 -2.625 -0.678 0.260  4.610   -8.527  -0.195   7  A_G42:U28_A A 42 ? A 28 ? 28 1 
1 A G 31 1_555 A C 15 1_555 -0.268 -0.267 0.082  -0.536  -5.732  2.416    8  A_G43:C27_A A 43 ? A 27 ? 19 1 
1 A G 32 1_555 A C 14 1_555 -0.444 -0.321 -0.278 -6.835  -11.950 2.731    9  A_G44:C26_A A 44 ? A 26 ? 19 1 
1 A A 33 1_555 A U 13 1_555 0.179  -0.292 0.043  -3.501  -2.226  1.746    10 A_A45:U25_A A 45 ? A 25 ? 20 1 
1 A G 34 1_555 A C 41 1_555 -0.636 -0.205 -0.231 -15.285 -7.879  1.463    11 A_G46:C53_A A 46 ? A 53 ? 19 1 
1 A U 35 1_555 A A 40 1_555 -0.065 -0.090 -0.021 12.645  3.711   5.328    12 A_U47:A52_A A 47 ? A 52 ? 20 1 
1 A A 23 1_555 A A 52 1_555 -4.230 1.091  0.367  -7.282  1.476   -106.130 13 A_A35:A64_A A 35 ? A 64 ? 5  4 
1 A C 49 1_555 A G 25 1_555 0.080  -0.346 0.636  -1.691  -15.136 -5.579   14 A_C61:G37_A A 61 ? A 37 ? 19 1 
1 A U 22 1_555 A A 53 1_555 4.030  -1.664 -0.407 -5.790  -6.950  -102.299 15 A_U34:A65_A A 34 ? A 65 ? 24 4 
1 A U 37 1_555 A A 61 1_555 -0.111 -0.042 -0.052 -19.126 -8.389  12.043   16 A_U49:A73_A A 49 ? A 73 ? 20 1 
1 A G 26 1_555 A C 48 1_555 0.128  -0.093 0.504  14.743  -14.651 -3.424   17 A_G38:C60_A A 38 ? A 60 ? 19 1 
1 A C 55 1_555 A G 47 1_555 0.109  -0.407 -0.111 10.583  -21.145 3.561    18 A_C67:G59_A A 67 ? A 59 ? 19 1 
1 A U 56 1_555 A A 46 1_555 0.166  -0.295 0.306  -3.566  -8.752  2.766    19 A_U68:A58_A A 68 ? A 58 ? 20 1 
1 A C 57 1_555 A G 45 1_555 0.210  -0.218 0.345  2.390   -11.851 0.284    20 A_C69:G57_A A 69 ? A 57 ? 19 1 
1 A U 58 1_555 A A 44 1_555 -0.234 -0.334 0.584  -5.735  -9.728  -4.148   21 A_U70:A56_A A 70 ? A 56 ? 20 1 
1 A U 59 1_555 A A 43 1_555 0.571  -0.160 0.282  4.353   -13.505 1.031    22 A_U71:A55_A A 71 ? A 55 ? 20 1 
1 A G 60 1_555 A C 42 1_555 -0.291 -0.281 -0.109 6.373   -4.335  1.580    23 A_G72:C54_A A 72 ? A 54 ? 19 1 
1 B A 4  1_555 B U 68 1_555 0.575  0.352  -0.667 -18.874 10.090  -3.232   24 B_A16:U80_B B 16 ? B 80 ? 20 1 
1 B A 5  1_555 B U 67 1_555 -0.962 -0.392 -0.905 -14.259 -24.563 -9.415   25 B_A17:U79_B B 17 ? B 79 ? 20 1 
1 B G 6  1_555 B C 66 1_555 -0.043 0.038  -0.403 -12.924 -24.789 1.175    26 B_G18:C78_B B 18 ? B 78 ? 19 1 
1 B A 7  1_555 B U 65 1_555 -0.134 -0.395 -0.117 -5.859  -15.927 1.321    27 B_A19:U77_B B 19 ? B 77 ? 20 1 
1 B U 8  1_555 B A 64 1_555 -0.380 -0.128 0.191  -10.669 -14.196 -0.360   28 B_U20:A76_B B 20 ? B 76 ? 20 1 
1 B A 9  1_555 B U 63 1_555 -0.313 -0.275 0.760  5.041   -12.396 -3.620   29 B_A21:U75_B B 21 ? B 75 ? 20 1 
1 B A 11 1_555 B U 62 1_555 -4.509 -2.929 -0.681 21.019  -9.987  -92.483  30 B_A23:U74_B B 23 ? B 74 ? 24 4 
1 B U 37 1_555 B A 61 1_555 -0.053 -0.048 0.424  -20.561 -13.568 8.025    31 B_U49:A73_B B 49 ? B 73 ? 20 1 
1 B C 42 1_555 B G 60 1_555 0.230  -0.289 -0.135 -9.924  -1.626  0.528    32 B_C54:G72_B B 54 ? B 72 ? 19 1 
1 B A 43 1_555 B U 59 1_555 -0.564 -0.148 0.260  -6.384  -11.655 0.451    33 B_A55:U71_B B 55 ? B 71 ? 20 1 
1 B A 44 1_555 B U 58 1_555 0.249  -0.346 0.560  5.114   -9.197  -4.759   34 B_A56:U70_B B 56 ? B 70 ? 20 1 
1 B G 45 1_555 B C 57 1_555 -0.163 -0.210 0.308  -3.056  -12.225 -1.978   35 B_G57:C69_B B 57 ? B 69 ? 19 1 
1 B A 46 1_555 B U 56 1_555 -0.110 -0.327 0.338  3.438   -10.073 -0.078   36 B_A58:U68_B B 58 ? B 68 ? 20 1 
1 B G 47 1_555 B C 55 1_555 -0.149 -0.462 -0.057 -10.983 -21.572 1.439    37 B_G59:C67_B B 59 ? B 67 ? 19 1 
1 B C 48 1_555 B G 26 1_555 -0.203 -0.085 0.559  -15.077 -15.653 -3.958   38 B_C60:G38_B B 60 ? B 38 ? 19 1 
1 B C 49 1_555 B G 25 1_555 -0.035 -0.280 0.595  -1.934  -14.420 -6.451   39 B_C61:G37_B B 61 ? B 37 ? 19 1 
1 B A 52 1_555 B A 23 1_555 4.231  1.057  0.337  8.374   0.406   -106.051 40 B_A64:A35_B B 64 ? B 35 ? 5  4 
1 B U 27 1_555 B U 19 1_555 -2.581 -1.944 0.293  -3.748  -19.136 16.385   41 B_U39:U31_B B 39 ? B 31 ? 16 1 
1 B U 28 1_555 B A 18 1_555 0.011  -0.252 0.062  -9.711  -11.624 4.384    42 B_U40:A30_B B 40 ? B 30 ? 20 1 
1 B U 29 1_555 B A 17 1_555 0.059  -0.280 -0.010 1.403   -6.306  1.912    43 B_U41:A29_B B 41 ? B 29 ? 20 1 
1 B G 30 1_555 B U 16 1_555 -2.581 -0.722 0.248  4.044   -7.976  -1.974   44 B_G42:U28_B B 42 ? B 28 ? 28 1 
1 B G 31 1_555 B C 15 1_555 -0.217 -0.280 0.024  -1.698  -5.703  -0.365   45 B_G43:C27_B B 43 ? B 27 ? 19 1 
1 B G 32 1_555 B C 14 1_555 -0.416 -0.349 -0.231 -5.936  -10.388 1.445    46 B_G44:C26_B B 44 ? B 26 ? 19 1 
1 B A 33 1_555 B U 13 1_555 0.233  -0.308 0.127  -0.679  -1.671  1.830    47 B_A45:U25_B B 45 ? B 25 ? 20 1 
1 B G 34 1_555 B C 41 1_555 -0.617 -0.187 -0.284 -18.530 -5.673  0.120    48 B_G46:C53_B B 46 ? B 53 ? 19 1 
1 B U 35 1_555 B A 40 1_555 0.082  -0.099 0.023  11.155  4.681   3.810    49 B_U47:A52_B B 47 ? B 52 ? 20 1 
1 B U 22 1_555 B A 53 1_555 4.063  -1.784 -0.384 -4.979  -6.284  -100.995 50 B_U34:A65_B B 34 ? B 65 ? 24 4 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A A 7  1_555 A U 65 1_555 A U 8  1_555 A A 64 1_555 0.731  -0.647 2.684  -13.155 14.121  34.934   -2.187  -2.225 1.912  21.606  
20.129  39.764   1  AA_A19U20:A76U77_AA A 19 ? A 77 ? A 20 ? A 76 ? 
1 A U 8  1_555 A A 64 1_555 A A 9  1_555 A U 63 1_555 0.631  -1.520 2.584  -2.677  8.091   31.053   -3.791  -1.486 2.072  14.768  
4.886   32.174   2  AA_U20A21:U75A76_AA A 20 ? A 76 ? A 21 ? A 75 ? 
1 A U 27 1_555 A U 19 1_555 A U 28 1_555 A A 18 1_555 -0.652 -1.017 3.394  0.445   7.574   44.870   -1.992  0.883  3.184  9.840   
-0.578  45.474   3  AA_U39U40:A30U31_AA A 39 ? A 31 ? A 40 ? A 30 ? 
1 A U 28 1_555 A A 18 1_555 A U 29 1_555 A A 17 1_555 -0.004 -1.814 3.084  2.945   1.401   23.650   -4.809  0.902  2.951  3.397   
-7.141  23.871   4  AA_U40U41:A29A30_AA A 40 ? A 30 ? A 41 ? A 29 ? 
1 A U 29 1_555 A A 17 1_555 A G 30 1_555 A U 16 1_555 0.375  -2.010 3.051  -2.110  7.787   19.060   -8.342  -1.789 2.026  22.269  
6.035   20.682   5  AA_U41G42:U28A29_AA A 41 ? A 29 ? A 42 ? A 28 ? 
1 A G 30 1_555 A U 16 1_555 A G 31 1_555 A C 15 1_555 0.240  -1.681 3.410  -0.940  4.437   40.540   -2.908  -0.449 3.210  6.379   
1.352   40.782   6  AA_G42G43:C27U28_AA A 42 ? A 28 ? A 43 ? A 27 ? 
1 A G 31 1_555 A C 15 1_555 A G 32 1_555 A C 14 1_555 0.257  -1.948 3.419  3.458   9.044   28.523   -5.532  0.185  2.700  17.723  
-6.776  30.089   7  AA_G43G44:C26C27_AA A 43 ? A 27 ? A 44 ? A 26 ? 
1 A G 32 1_555 A C 14 1_555 A A 33 1_555 A U 13 1_555 0.009  -1.795 3.153  -4.394  2.718   34.711   -3.363  -0.636 2.985  4.524   
7.315   35.082   8  AA_G44A45:U25C26_AA A 44 ? A 26 ? A 45 ? A 25 ? 
1 A A 33 1_555 A U 13 1_555 A G 34 1_555 A C 41 1_555 2.266  -0.734 3.404  11.659  12.674  47.035   -1.882  -1.753 3.543  15.294  
-14.069 49.919   9  AA_A45G46:C53U25_AA A 45 ? A 25 ? A 46 ? A 53 ? 
1 A G 34 1_555 A C 41 1_555 A U 35 1_555 A A 40 1_555 0.144  -0.295 2.673  -2.485  18.406  24.807   -3.382  -0.653 1.970  36.946  
4.988   30.902   10 AA_G46U47:A52C53_AA A 46 ? A 53 ? A 47 ? A 52 ? 
1 A A 23 1_555 A A 52 1_555 A C 49 1_555 A G 25 1_555 4.214  0.276  -3.724 -0.705  -4.903  135.116  0.114   -2.274 -3.739 -2.652  
0.381   135.161  11 AA_A35C61:G37A64_AA A 35 ? A 64 ? A 61 ? A 37 ? 
1 A C 49 1_555 A G 25 1_555 A U 22 1_555 A A 53 1_555 -5.494 -4.617 0.983  -4.315  -22.185 -114.313 2.772   -3.252 0.275  13.133  
-2.554  -115.742 12 AA_C61U34:A65G37_AA A 61 ? A 37 ? A 34 ? A 65 ? 
1 A G 26 1_555 A C 48 1_555 A C 55 1_555 A G 47 1_555 -1.646 -0.357 3.271  1.402   1.137   54.474   -0.459  1.882  3.223  1.242   
-1.531  54.501   13 AA_G38C67:G59C60_AA A 38 ? A 60 ? A 67 ? A 59 ? 
1 A C 55 1_555 A G 47 1_555 A U 56 1_555 A A 46 1_555 -0.624 -1.845 3.511  -5.319  8.881   34.061   -4.344  0.230  3.011  14.745  
8.830   35.555   14 AA_C67U68:A58G59_AA A 67 ? A 59 ? A 68 ? A 58 ? 
1 A U 56 1_555 A A 46 1_555 A C 57 1_555 A G 45 1_555 -0.305 -1.498 3.103  -0.254  -0.112  31.484   -2.742  0.518  3.110  -0.207  
0.467   31.485   15 AA_U68C69:G57A58_AA A 68 ? A 58 ? A 69 ? A 57 ? 
1 A C 57 1_555 A G 45 1_555 A U 58 1_555 A A 44 1_555 -0.372 -1.590 3.444  -2.818  2.828   30.008   -3.638  0.121  3.304  5.432   
5.412   30.267   16 AA_C69U70:A56G57_AA A 69 ? A 57 ? A 70 ? A 56 ? 
1 A U 58 1_555 A A 44 1_555 A U 59 1_555 A A 43 1_555 0.044  -1.278 2.980  2.032   -1.539  36.796   -1.829  0.183  3.027  -2.434  
-3.214  36.881   17 AA_U70U71:A55A56_AA A 70 ? A 56 ? A 71 ? A 55 ? 
1 A U 59 1_555 A A 43 1_555 A G 60 1_555 A C 42 1_555 0.017  -1.531 3.201  1.851   7.409   25.870   -5.019  0.398  2.662  16.108  
-4.024  26.955   18 AA_U71G72:C54A55_AA A 71 ? A 55 ? A 72 ? A 54 ? 
1 B A 4  1_555 B U 68 1_555 B A 5  1_555 B U 67 1_555 -0.033 -1.683 3.495  1.998   15.926  23.732   -6.735  0.484  1.985  34.171  
-4.287  28.586   19 BB_A16A17:U79U80_BB B 16 ? B 80 ? B 17 ? B 79 ? 
1 B A 5  1_555 B U 67 1_555 B G 6  1_555 B C 66 1_555 0.846  -1.324 3.433  -4.166  15.600  35.785   -3.770  -1.742 2.551  23.943  
6.393   39.151   20 BB_A17G18:C78U79_BB B 17 ? B 79 ? B 18 ? B 78 ? 
1 B G 6  1_555 B C 66 1_555 B A 7  1_555 B U 65 1_555 0.022  -1.348 3.188  -3.017  4.036   30.151   -3.316  -0.609 2.970  7.691   
5.749   30.559   21 BB_G18A19:U77C78_BB B 18 ? B 78 ? B 19 ? B 77 ? 
1 B A 7  1_555 B U 65 1_555 B U 8  1_555 B A 64 1_555 0.469  -1.290 3.379  -0.529  13.368  32.936   -4.000  -0.844 2.664  22.459  
0.889   35.480   22 BB_A19U20:A76U77_BB B 19 ? B 77 ? B 20 ? B 76 ? 
1 B U 8  1_555 B A 64 1_555 B A 9  1_555 B U 63 1_555 0.612  -1.710 2.600  2.427   13.759  28.201   -4.933  -0.818 1.652  26.294  
-4.637  31.409   23 BB_U20A21:U75A76_BB B 20 ? B 76 ? B 21 ? B 75 ? 
1 B A 9  1_555 B U 63 1_555 B A 11 1_555 B U 62 1_555 -3.077 -2.848 3.090  2.430   12.557  -1.001   -14.481 -8.502 3.612  -83.984 
16.254  -12.829  24 BB_A21A23:U74U75_BB B 21 ? B 75 ? B 23 ? B 74 ? 
1 B A 11 1_555 B U 62 1_555 B U 37 1_555 B A 61 1_555 1.467  -2.514 4.013  -12.120 5.838   96.682   -1.790  -1.218 3.741  3.893   
8.082   97.382   25 BB_A23U49:A73U74_BB B 23 ? B 74 ? B 49 ? B 73 ? 
1 B U 37 1_555 B A 61 1_555 B C 42 1_555 B G 60 1_555 -0.912 -3.069 6.770  34.559  5.228   36.640   -4.356  5.963  4.100  6.738   
-44.541 50.219   26 BB_U49C54:G72A73_BB B 49 ? B 73 ? B 54 ? B 72 ? 
1 B C 42 1_555 B G 60 1_555 B A 43 1_555 B U 59 1_555 -0.027 -1.606 3.216  -1.180  5.596   25.332   -5.011  -0.243 2.800  12.557  
2.648   25.959   27 BB_C54A55:U71G72_BB B 54 ? B 72 ? B 55 ? B 71 ? 
1 B A 43 1_555 B U 59 1_555 B A 44 1_555 B U 58 1_555 -0.083 -1.304 2.978  -1.749  -2.091  35.873   -1.836  -0.096 3.047  -3.389  
2.835   35.973   28 BB_A55A56:U70U71_BB B 55 ? B 71 ? B 56 ? B 70 ? 
1 B A 44 1_555 B U 58 1_555 B G 45 1_555 B C 57 1_555 0.306  -1.599 3.454  3.162   3.198   30.323   -3.678  0.068  3.286  6.071   
-6.003  30.647   29 BB_A56G57:C69U70_BB B 56 ? B 70 ? B 57 ? B 69 ? 
1 B G 45 1_555 B C 57 1_555 B A 46 1_555 B U 56 1_555 0.241  -1.451 3.078  0.044   -0.750  32.595   -2.461  -0.423 3.110  -1.336  
-0.078  32.604   30 BB_G57A58:U68C69_BB B 57 ? B 69 ? B 58 ? B 68 ? 
1 B A 46 1_555 B U 56 1_555 B G 47 1_555 B C 55 1_555 0.625  -1.806 3.488  5.273   8.539   35.617   -4.021  -0.261 3.048  13.629  
-8.416  36.960   31 BB_A58G59:C67U68_BB B 58 ? B 68 ? B 59 ? B 67 ? 
1 B G 47 1_555 B C 55 1_555 B C 48 1_555 B G 26 1_555 1.701  -0.334 3.234  -1.154  2.004   54.830   -0.480  -1.913 3.187  2.175   
1.253   54.875   32 BB_G59C60:G38C67_BB B 59 ? B 67 ? B 60 ? B 38 ? 
1 B C 48 1_555 B G 26 1_555 B C 49 1_555 B G 25 1_555 -0.553 -0.907 3.114  -2.077  8.134   28.459   -3.353  0.677  2.786  16.108  
4.114   29.647   33 BB_C60C61:G37G38_BB B 60 ? B 38 ? B 61 ? B 37 ? 
1 B C 49 1_555 B G 25 1_555 B A 52 1_555 B A 23 1_555 -3.859 -0.344 4.090  -66.929 161.783 154.393  -0.604  1.751  4.244  80.948  
33.488  178.910  34 BB_C61A64:A35G37_BB B 61 ? B 37 ? B 64 ? B 35 ? 
1 B U 27 1_555 B U 19 1_555 B U 28 1_555 B A 18 1_555 -0.728 -0.974 3.384  0.626   6.974   45.038   -1.879  0.996  3.197  9.039   
-0.812  45.551   35 BB_U39U40:A30U31_BB B 39 ? B 31 ? B 40 ? B 30 ? 
1 B U 28 1_555 B A 18 1_555 B U 29 1_555 B A 17 1_555 -0.110 -1.677 3.087  2.937   1.155   26.500   -3.915  0.951  2.983  2.508   
-6.379  26.684   36 BB_U40U41:A29A30_BB B 40 ? B 30 ? B 41 ? B 29 ? 
1 B U 29 1_555 B A 17 1_555 B G 30 1_555 B U 16 1_555 0.360  -1.973 3.088  -2.324  7.218   19.617   -7.944  -1.803 2.174  20.235  
6.514   21.018   37 BB_U41G42:U28A29_BB B 41 ? B 29 ? B 42 ? B 28 ? 
1 B G 30 1_555 B U 16 1_555 B G 31 1_555 B C 15 1_555 0.224  -1.689 3.444  -0.066  4.198   41.489   -2.828  -0.321 3.265  5.908   
0.093   41.692   38 BB_G42G43:C27U28_BB B 42 ? B 28 ? B 43 ? B 27 ? 
1 B G 31 1_555 B C 15 1_555 B G 32 1_555 B C 14 1_555 0.256  -1.930 3.400  2.551   7.786   27.886   -5.501  0.030  2.782  15.731  
-5.155  29.041   39 BB_G43G44:C26C27_BB B 43 ? B 27 ? B 44 ? B 26 ? 
1 B G 32 1_555 B C 14 1_555 B A 33 1_555 B U 13 1_555 0.042  -1.833 3.114  -4.955  2.404   34.750   -3.367  -0.758 2.951  3.994   
8.232   35.170   40 BB_G44A45:U25C26_BB B 44 ? B 26 ? B 45 ? B 25 ? 
1 B A 33 1_555 B U 13 1_555 B G 34 1_555 B C 41 1_555 2.346  -0.751 3.510  14.866  11.927  47.511   -1.834  -1.526 3.763  14.158  
-17.646 50.984   41 BB_A45G46:C53U25_BB B 45 ? B 25 ? B 46 ? B 53 ? 
1 B G 34 1_555 B C 41 1_555 B U 35 1_555 B A 40 1_555 0.177  -0.306 2.671  -2.803  16.850  25.831   -3.165  -0.764 2.062  33.437  
5.562   30.888   42 BB_G46U47:A52C53_BB B 46 ? B 53 ? B 47 ? B 52 ? 
# 
loop_
_pdbx_entity_nonpoly.entity_id 
_pdbx_entity_nonpoly.name 
_pdbx_entity_nonpoly.comp_id 
2 ADENINE         ADE 
3 'MAGNESIUM ION' MG  
4 water           HOH 
# 
_pdbx_initial_refinement_model.id               1 
_pdbx_initial_refinement_model.entity_id_list   ? 
_pdbx_initial_refinement_model.type             'experimental model' 
_pdbx_initial_refinement_model.source_name      PDB 
_pdbx_initial_refinement_model.accession_code   5E54 
_pdbx_initial_refinement_model.details          ? 
#