data_5T01 # _entry.id 5T01 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5T01 pdb_00005t01 10.2210/pdb5t01/pdb WWPDB D_1000223389 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 5SZX _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5T01 _pdbx_database_status.recvd_initial_deposition_date 2016-08-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Hong, S.' 1 ? 'Horton, J.R.' 2 ? 'Cheng, X.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 45 _citation.language ? _citation.page_first 2503 _citation.page_last 2515 _citation.title ;Methyl-dependent and spatial-specific DNA recognition by the orthologous transcription factors human AP-1 and Epstein-Barr virus Zta. ; _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkx057 _citation.pdbx_database_id_PubMed 28158710 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hong, S.' 1 ? primary 'Wang, D.' 2 ? primary 'Horton, J.R.' 3 ? primary 'Zhang, X.' 4 ? primary 'Speck, S.H.' 5 ? primary 'Blumenthal, R.M.' 6 ? primary 'Cheng, X.' 7 ? # _cell.entry_id 5T01 _cell.length_a 158.871 _cell.length_b 42.490 _cell.length_c 45.167 _cell.angle_alpha 90.00 _cell.angle_beta 98.01 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5T01 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(P*CP*TP*CP*CP*TP*AP*TP*GP*AP*CP*TP*CP*GP*TP*CP*CP*AP*T)-3') ; 5706.697 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*AP*AP*TP*GP*GP*AP*(5CM)P*GP*AP*GP*TP*CP*AP*TP*AP*GP*GP*AP*G)-3') ; 5956.901 1 ? ? ? ? 3 polymer man 'Transcription factor AP-1' 7591.038 2 ? C269S 'DNA binding domain (UNP residues 254-315)' ? 4 water nat water 18.015 120 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'Activator protein 1,AP1,Proto-oncogene c-Jun,V-jun avian sarcoma virus 17 oncogene homolog,p39' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DT)(DC)(DT)(DC)(DC)(DT)(DA)(DT)(DG)(DA)(DC)(DT)(DC)(DG)(DT)(DC)(DC)(DA)(DT)' TCTCCTATGACTCGTCCAT C ? 2 polydeoxyribonucleotide no yes '(DA)(DA)(DT)(DG)(DG)(DA)(5CM)(DG)(DA)(DG)(DT)(DC)(DA)(DT)(DA)(DG)(DG)(DA)(DG)' AATGGACGAGTCATAGGAG D ? 3 'polypeptide(L)' no no HMKAERKRMRNRIAASKSRKRKLERIARLEEKVKTLKAQNSELASTANMLREQVAQLKQKVMNH HMKAERKRMRNRIAASKSRKRKLERIARLEEKVKTLKAQNSELASTANMLREQVAQLKQKVMNH A,B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DC n 1 3 DT n 1 4 DC n 1 5 DC n 1 6 DT n 1 7 DA n 1 8 DT n 1 9 DG n 1 10 DA n 1 11 DC n 1 12 DT n 1 13 DC n 1 14 DG n 1 15 DT n 1 16 DC n 1 17 DC n 1 18 DA n 1 19 DT n 2 1 DA n 2 2 DA n 2 3 DT n 2 4 DG n 2 5 DG n 2 6 DA n 2 7 5CM n 2 8 DG n 2 9 DA n 2 10 DG n 2 11 DT n 2 12 DC n 2 13 DA n 2 14 DT n 2 15 DA n 2 16 DG n 2 17 DG n 2 18 DA n 2 19 DG n 3 1 HIS n 3 2 MET n 3 3 LYS n 3 4 ALA n 3 5 GLU n 3 6 ARG n 3 7 LYS n 3 8 ARG n 3 9 MET n 3 10 ARG n 3 11 ASN n 3 12 ARG n 3 13 ILE n 3 14 ALA n 3 15 ALA n 3 16 SER n 3 17 LYS n 3 18 SER n 3 19 ARG n 3 20 LYS n 3 21 ARG n 3 22 LYS n 3 23 LEU n 3 24 GLU n 3 25 ARG n 3 26 ILE n 3 27 ALA n 3 28 ARG n 3 29 LEU n 3 30 GLU n 3 31 GLU n 3 32 LYS n 3 33 VAL n 3 34 LYS n 3 35 THR n 3 36 LEU n 3 37 LYS n 3 38 ALA n 3 39 GLN n 3 40 ASN n 3 41 SER n 3 42 GLU n 3 43 LEU n 3 44 ALA n 3 45 SER n 3 46 THR n 3 47 ALA n 3 48 ASN n 3 49 MET n 3 50 LEU n 3 51 ARG n 3 52 GLU n 3 53 GLN n 3 54 VAL n 3 55 ALA n 3 56 GLN n 3 57 LEU n 3 58 LYS n 3 59 GLN n 3 60 LYS n 3 61 VAL n 3 62 MET n 3 63 ASN n 3 64 HIS n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 64 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene JUN _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 19 'synthetic construct' ? 32630 ? 2 1 sample 1 19 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 5T01 5T01 ? 1 ? 1 2 PDB 5T01 5T01 ? 2 ? 1 3 UNP JUN_HUMAN P05412 ? 3 KAERKRMRNRIAASKCRKRKLERIARLEEKVKTLKAQNSELASTANMLREQVAQLKQKVMNH 254 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5T01 C 1 ? 19 ? 5T01 0 ? 18 ? 0 18 2 2 5T01 D 1 ? 19 ? 5T01 23 ? 41 ? 23 41 3 3 5T01 A 3 ? 64 ? P05412 254 ? 315 ? 254 315 4 3 5T01 B 3 ? 64 ? P05412 254 ? 315 ? 254 315 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 3 5T01 HIS A 1 ? UNP P05412 ? ? 'expression tag' 252 1 3 5T01 MET A 2 ? UNP P05412 ? ? 'expression tag' 253 2 3 5T01 SER A 18 ? UNP P05412 CYS 269 'engineered mutation' 269 3 4 5T01 HIS B 1 ? UNP P05412 ? ? 'expression tag' 252 4 4 5T01 MET B 2 ? UNP P05412 ? ? 'expression tag' 253 5 4 5T01 SER B 18 ? UNP P05412 CYS 269 'engineered mutation' 269 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5CM 'DNA linking' n "5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O7 P' 321.224 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5T01 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.81 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 56.25 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.05 M Citric acid 0.05 M Bis-Tris propane 16% PEG3350 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX300-HS' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-02-27 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5T01 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.89 _reflns.d_resolution_low 35 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 23735 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.5 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.9 _reflns.pdbx_Rmerge_I_obs 0.083 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 20.3 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.89 _reflns_shell.d_res_low 1.96 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.63 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 90.1 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.800 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 4.2 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5T01 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 23712 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.750 _refine.ls_d_res_high 1.89 _refine.ls_percent_reflns_obs 97.97 _refine.ls_R_factor_obs 0.1949 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1931 _refine.ls_R_factor_R_free 0.2271 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.01 _refine.ls_number_reflns_R_free 1187 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model 1FOS _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.24 _refine.pdbx_overall_phase_error 28.09 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1012 _refine_hist.pdbx_number_atoms_nucleic_acid 758 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 120 _refine_hist.number_atoms_total 1890 _refine_hist.d_res_high 1.89 _refine_hist.d_res_low 27.750 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.014 ? ? 1861 'X-RAY DIFFRACTION' ? f_angle_d 1.374 ? ? 2638 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 23.914 ? ? 802 'X-RAY DIFFRACTION' ? f_chiral_restr 0.058 ? ? 296 'X-RAY DIFFRACTION' ? f_plane_restr 0.007 ? ? 205 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 1.8896 1.9755 2485 0.2980 87.00 0.3226 . . 131 . . . . 'X-RAY DIFFRACTION' . 1.9755 2.0797 2777 0.2695 98.00 0.2908 . . 147 . . . . 'X-RAY DIFFRACTION' . 2.0797 2.2099 2858 0.2403 100.00 0.2835 . . 150 . . . . 'X-RAY DIFFRACTION' . 2.2099 2.3804 2872 0.2248 100.00 0.2851 . . 151 . . . . 'X-RAY DIFFRACTION' . 2.3804 2.6198 2849 0.2380 100.00 0.2734 . . 150 . . . . 'X-RAY DIFFRACTION' . 2.6198 2.9985 2875 0.2336 100.00 0.2497 . . 152 . . . . 'X-RAY DIFFRACTION' . 2.9985 3.7763 2875 0.1798 100.00 0.2292 . . 151 . . . . 'X-RAY DIFFRACTION' . 3.7763 27.7531 2934 0.1496 99.00 0.1767 . . 155 . . . . # _struct.entry_id 5T01 _struct.title 'Human c-Jun DNA binding domain homodimer in complex with methylated DNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5T01 _struct_keywords.text ;Zta, Zebra, BZLF-1, AP-1, Epstein-Barr virus, EBV, 5-methylcytosine, 5mC, DNA methylation, transcription factor, basic leucine-zipper, bZIP, TRANSCRIPTION REGULATOR-DNA complex ; _struct_keywords.pdbx_keywords 'TRANSCRIPTION REGULATOR/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LYS C 3 ? LYS C 60 ? LYS A 254 LYS A 311 1 ? 58 HELX_P HELX_P2 AA2 LYS D 3 ? MET D 62 ? LYS B 254 MET B 313 1 ? 60 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DA 6 "O3'" ? ? ? 1_555 B 5CM 7 P ? ? D DA 28 D 5CM 29 1_555 ? ? ? ? ? ? ? 1.612 ? ? covale2 covale both ? B 5CM 7 "O3'" ? ? ? 1_555 B DG 8 P ? ? D 5CM 29 D DG 30 1_555 ? ? ? ? ? ? ? 1.619 ? ? hydrog1 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 19 N1 ? ? C DC 1 D DG 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 19 O6 ? ? C DC 1 D DG 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 19 N2 ? ? C DC 1 D DG 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 18 N1 ? ? C DT 2 D DA 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 18 N6 ? ? C DT 2 D DA 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 4 N3 ? ? ? 1_555 B DG 17 N1 ? ? C DC 3 D DG 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B DG 17 O6 ? ? C DC 3 D DG 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B DG 17 N2 ? ? C DC 3 D DG 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 16 N1 ? ? C DC 4 D DG 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 16 O6 ? ? C DC 4 D DG 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 16 N2 ? ? C DC 4 D DG 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 6 N3 ? ? ? 1_555 B DA 15 N1 ? ? C DT 5 D DA 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 6 O4 ? ? ? 1_555 B DA 15 N6 ? ? C DT 5 D DA 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 14 N3 ? ? C DA 6 D DT 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 14 O4 ? ? C DA 6 D DT 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 13 N1 ? ? C DT 7 D DA 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 13 N6 ? ? C DT 7 D DA 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 12 N3 ? ? C DG 8 D DC 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 12 O2 ? ? C DG 8 D DC 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 12 N4 ? ? C DG 8 D DC 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DA 10 N1 ? ? ? 1_555 B DT 11 N3 ? ? C DA 9 D DT 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DA 10 N6 ? ? ? 1_555 B DT 11 O4 ? ? C DA 9 D DT 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 10 N1 ? ? C DC 10 D DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 10 O6 ? ? C DC 10 D DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 10 N2 ? ? C DC 10 D DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DT 12 N3 ? ? ? 1_555 B DA 9 N1 ? ? C DT 11 D DA 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DT 12 O4 ? ? ? 1_555 B DA 9 N6 ? ? C DT 11 D DA 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 13 N3 ? ? ? 1_555 B DG 8 N1 ? ? C DC 12 D DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 13 N4 ? ? ? 1_555 B DG 8 O6 ? ? C DC 12 D DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DC 13 O2 ? ? ? 1_555 B DG 8 N2 ? ? C DC 12 D DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 14 N1 ? ? ? 1_555 B 5CM 7 N3 ? ? C DG 13 D 5CM 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DG 14 N2 ? ? ? 1_555 B 5CM 7 O2 ? ? C DG 13 D 5CM 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DG 14 O6 ? ? ? 1_555 B 5CM 7 N4 ? ? C DG 13 D 5CM 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DT 15 N3 ? ? ? 1_555 B DA 6 N1 ? ? C DT 14 D DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DT 15 O4 ? ? ? 1_555 B DA 6 N6 ? ? C DT 14 D DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DC 16 N3 ? ? ? 1_555 B DG 5 N1 ? ? C DC 15 D DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DC 16 N4 ? ? ? 1_555 B DG 5 O6 ? ? C DC 15 D DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DC 16 O2 ? ? ? 1_555 B DG 5 N2 ? ? C DC 15 D DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DC 17 N3 ? ? ? 1_555 B DG 4 N1 ? ? C DC 16 D DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DC 17 N4 ? ? ? 1_555 B DG 4 O6 ? ? C DC 16 D DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DC 17 O2 ? ? ? 1_555 B DG 4 N2 ? ? C DC 16 D DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DA 18 N1 ? ? ? 1_555 B DT 3 N3 ? ? C DA 17 D DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DA 18 N6 ? ? ? 1_555 B DT 3 O4 ? ? C DA 17 D DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DT 19 N3 ? ? ? 1_555 B DA 2 N1 ? ? C DT 18 D DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A DT 19 O4 ? ? ? 1_555 B DA 2 N6 ? ? C DT 18 D DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _atom_sites.entry_id 5T01 _atom_sites.fract_transf_matrix[1][1] 0.006294 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000886 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023535 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022358 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 0 ? ? ? C . n A 1 2 DC 2 1 1 DC DC C . n A 1 3 DT 3 2 2 DT DT C . n A 1 4 DC 4 3 3 DC DC C . n A 1 5 DC 5 4 4 DC DC C . n A 1 6 DT 6 5 5 DT DT C . n A 1 7 DA 7 6 6 DA DA C . n A 1 8 DT 8 7 7 DT DT C . n A 1 9 DG 9 8 8 DG DG C . n A 1 10 DA 10 9 9 DA DA C . n A 1 11 DC 11 10 10 DC DC C . n A 1 12 DT 12 11 11 DT DT C . n A 1 13 DC 13 12 12 DC DC C . n A 1 14 DG 14 13 13 DG DG C . n A 1 15 DT 15 14 14 DT DT C . n A 1 16 DC 16 15 15 DC DC C . n A 1 17 DC 17 16 16 DC DC C . n A 1 18 DA 18 17 17 DA DA C . n A 1 19 DT 19 18 18 DT DT C . n B 2 1 DA 1 23 23 DA DA D . n B 2 2 DA 2 24 24 DA DA D . n B 2 3 DT 3 25 25 DT DT D . n B 2 4 DG 4 26 26 DG DG D . n B 2 5 DG 5 27 27 DG DG D . n B 2 6 DA 6 28 28 DA DA D . n B 2 7 5CM 7 29 29 5CM 5CM D . n B 2 8 DG 8 30 30 DG DG D . n B 2 9 DA 9 31 31 DA DA D . n B 2 10 DG 10 32 32 DG DG D . n B 2 11 DT 11 33 33 DT DT D . n B 2 12 DC 12 34 34 DC DC D . n B 2 13 DA 13 35 35 DA DA D . n B 2 14 DT 14 36 36 DT DT D . n B 2 15 DA 15 37 37 DA DA D . n B 2 16 DG 16 38 38 DG DG D . n B 2 17 DG 17 39 39 DG DG D . n B 2 18 DA 18 40 40 DA DA D . n B 2 19 DG 19 41 41 DG DG D . n C 3 1 HIS 1 252 252 HIS HIS A . n C 3 2 MET 2 253 253 MET MET A . n C 3 3 LYS 3 254 254 LYS LYS A . n C 3 4 ALA 4 255 255 ALA ALA A . n C 3 5 GLU 5 256 256 GLU GLU A . n C 3 6 ARG 6 257 257 ARG ARG A . n C 3 7 LYS 7 258 258 LYS LYS A . n C 3 8 ARG 8 259 259 ARG ARG A . n C 3 9 MET 9 260 260 MET MET A . n C 3 10 ARG 10 261 261 ARG ARG A . n C 3 11 ASN 11 262 262 ASN ASN A . n C 3 12 ARG 12 263 263 ARG ARG A . n C 3 13 ILE 13 264 264 ILE ILE A . n C 3 14 ALA 14 265 265 ALA ALA A . n C 3 15 ALA 15 266 266 ALA ALA A . n C 3 16 SER 16 267 267 SER SER A . n C 3 17 LYS 17 268 268 LYS LYS A . n C 3 18 SER 18 269 269 SER SER A . n C 3 19 ARG 19 270 270 ARG ARG A . n C 3 20 LYS 20 271 271 LYS LYS A . n C 3 21 ARG 21 272 272 ARG ARG A . n C 3 22 LYS 22 273 273 LYS LYS A . n C 3 23 LEU 23 274 274 LEU LEU A . n C 3 24 GLU 24 275 275 GLU GLU A . n C 3 25 ARG 25 276 276 ARG ARG A . n C 3 26 ILE 26 277 277 ILE ILE A . n C 3 27 ALA 27 278 278 ALA ALA A . n C 3 28 ARG 28 279 279 ARG ARG A . n C 3 29 LEU 29 280 280 LEU LEU A . n C 3 30 GLU 30 281 281 GLU GLU A . n C 3 31 GLU 31 282 282 GLU GLU A . n C 3 32 LYS 32 283 283 LYS LYS A . n C 3 33 VAL 33 284 284 VAL VAL A . n C 3 34 LYS 34 285 285 LYS LYS A . n C 3 35 THR 35 286 286 THR THR A . n C 3 36 LEU 36 287 287 LEU LEU A . n C 3 37 LYS 37 288 288 LYS LYS A . n C 3 38 ALA 38 289 289 ALA ALA A . n C 3 39 GLN 39 290 290 GLN GLN A . n C 3 40 ASN 40 291 291 ASN ASN A . n C 3 41 SER 41 292 292 SER SER A . n C 3 42 GLU 42 293 293 GLU GLU A . n C 3 43 LEU 43 294 294 LEU LEU A . n C 3 44 ALA 44 295 295 ALA ALA A . n C 3 45 SER 45 296 296 SER SER A . n C 3 46 THR 46 297 297 THR THR A . n C 3 47 ALA 47 298 298 ALA ALA A . n C 3 48 ASN 48 299 299 ASN ASN A . n C 3 49 MET 49 300 300 MET MET A . n C 3 50 LEU 50 301 301 LEU LEU A . n C 3 51 ARG 51 302 302 ARG ARG A . n C 3 52 GLU 52 303 303 GLU GLU A . n C 3 53 GLN 53 304 304 GLN GLN A . n C 3 54 VAL 54 305 305 VAL VAL A . n C 3 55 ALA 55 306 306 ALA ALA A . n C 3 56 GLN 56 307 307 GLN GLN A . n C 3 57 LEU 57 308 308 LEU LEU A . n C 3 58 LYS 58 309 309 LYS LYS A . n C 3 59 GLN 59 310 310 GLN GLN A . n C 3 60 LYS 60 311 311 LYS LYS A . n C 3 61 VAL 61 312 312 VAL VAL A . n C 3 62 MET 62 313 313 MET MET A . n C 3 63 ASN 63 314 ? ? ? A . n C 3 64 HIS 64 315 ? ? ? A . n D 3 1 HIS 1 252 252 HIS HIS B . n D 3 2 MET 2 253 253 MET MET B . n D 3 3 LYS 3 254 254 LYS LYS B . n D 3 4 ALA 4 255 255 ALA ALA B . n D 3 5 GLU 5 256 256 GLU GLU B . n D 3 6 ARG 6 257 257 ARG ARG B . n D 3 7 LYS 7 258 258 LYS LYS B . n D 3 8 ARG 8 259 259 ARG ARG B . n D 3 9 MET 9 260 260 MET MET B . n D 3 10 ARG 10 261 261 ARG ARG B . n D 3 11 ASN 11 262 262 ASN ASN B . n D 3 12 ARG 12 263 263 ARG ARG B . n D 3 13 ILE 13 264 264 ILE ILE B . n D 3 14 ALA 14 265 265 ALA ALA B . n D 3 15 ALA 15 266 266 ALA ALA B . n D 3 16 SER 16 267 267 SER SER B . n D 3 17 LYS 17 268 268 LYS LYS B . n D 3 18 SER 18 269 269 SER SER B . n D 3 19 ARG 19 270 270 ARG ARG B . n D 3 20 LYS 20 271 271 LYS LYS B . n D 3 21 ARG 21 272 272 ARG ARG B . n D 3 22 LYS 22 273 273 LYS LYS B . n D 3 23 LEU 23 274 274 LEU LEU B . n D 3 24 GLU 24 275 275 GLU GLU B . n D 3 25 ARG 25 276 276 ARG ARG B . n D 3 26 ILE 26 277 277 ILE ILE B . n D 3 27 ALA 27 278 278 ALA ALA B . n D 3 28 ARG 28 279 279 ARG ARG B . n D 3 29 LEU 29 280 280 LEU LEU B . n D 3 30 GLU 30 281 281 GLU GLU B . n D 3 31 GLU 31 282 282 GLU GLU B . n D 3 32 LYS 32 283 283 LYS LYS B . n D 3 33 VAL 33 284 284 VAL VAL B . n D 3 34 LYS 34 285 285 LYS LYS B . n D 3 35 THR 35 286 286 THR THR B . n D 3 36 LEU 36 287 287 LEU LEU B . n D 3 37 LYS 37 288 288 LYS LYS B . n D 3 38 ALA 38 289 289 ALA ALA B . n D 3 39 GLN 39 290 290 GLN GLN B . n D 3 40 ASN 40 291 291 ASN ASN B . n D 3 41 SER 41 292 292 SER SER B . n D 3 42 GLU 42 293 293 GLU GLU B . n D 3 43 LEU 43 294 294 LEU LEU B . n D 3 44 ALA 44 295 295 ALA ALA B . n D 3 45 SER 45 296 296 SER SER B . n D 3 46 THR 46 297 297 THR THR B . n D 3 47 ALA 47 298 298 ALA ALA B . n D 3 48 ASN 48 299 299 ASN ASN B . n D 3 49 MET 49 300 300 MET MET B . n D 3 50 LEU 50 301 301 LEU LEU B . n D 3 51 ARG 51 302 302 ARG ARG B . n D 3 52 GLU 52 303 303 GLU GLU B . n D 3 53 GLN 53 304 304 GLN GLN B . n D 3 54 VAL 54 305 305 VAL VAL B . n D 3 55 ALA 55 306 306 ALA ALA B . n D 3 56 GLN 56 307 307 GLN GLN B . n D 3 57 LEU 57 308 308 LEU LEU B . n D 3 58 LYS 58 309 309 LYS LYS B . n D 3 59 GLN 59 310 310 GLN GLN B . n D 3 60 LYS 60 311 311 LYS ALA B . n D 3 61 VAL 61 312 312 VAL VAL B . n D 3 62 MET 62 313 313 MET MET B . n D 3 63 ASN 63 314 ? ? ? B . n D 3 64 HIS 64 315 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 HOH 1 101 234 HOH HOH C . E 4 HOH 2 102 40 HOH HOH C . E 4 HOH 3 103 91 HOH HOH C . E 4 HOH 4 104 237 HOH HOH C . E 4 HOH 5 105 177 HOH HOH C . E 4 HOH 6 106 60 HOH HOH C . E 4 HOH 7 107 42 HOH HOH C . E 4 HOH 8 108 8 HOH HOH C . E 4 HOH 9 109 160 HOH HOH C . E 4 HOH 10 110 31 HOH HOH C . E 4 HOH 11 111 68 HOH HOH C . E 4 HOH 12 112 43 HOH HOH C . E 4 HOH 13 113 213 HOH HOH C . E 4 HOH 14 114 236 HOH HOH C . E 4 HOH 15 115 67 HOH HOH C . E 4 HOH 16 116 20 HOH HOH C . E 4 HOH 17 117 84 HOH HOH C . E 4 HOH 18 118 222 HOH HOH C . E 4 HOH 19 119 106 HOH HOH C . E 4 HOH 20 120 13 HOH HOH C . E 4 HOH 21 121 228 HOH HOH C . E 4 HOH 22 122 21 HOH HOH C . E 4 HOH 23 123 3 HOH HOH C . E 4 HOH 24 124 33 HOH HOH C . E 4 HOH 25 125 232 HOH HOH C . E 4 HOH 26 126 36 HOH HOH C . E 4 HOH 27 127 235 HOH HOH C . E 4 HOH 28 128 233 HOH HOH C . E 4 HOH 29 129 126 HOH HOH C . E 4 HOH 30 130 224 HOH HOH C . E 4 HOH 31 131 216 HOH HOH C . E 4 HOH 32 132 54 HOH HOH C . E 4 HOH 33 133 207 HOH HOH C . E 4 HOH 34 134 12 HOH HOH C . E 4 HOH 35 135 204 HOH HOH C . E 4 HOH 36 136 230 HOH HOH C . E 4 HOH 37 137 212 HOH HOH C . E 4 HOH 38 138 229 HOH HOH C . E 4 HOH 39 139 85 HOH HOH C . F 4 HOH 1 101 198 HOH HOH D . F 4 HOH 2 102 10 HOH HOH D . F 4 HOH 3 103 25 HOH HOH D . F 4 HOH 4 104 62 HOH HOH D . F 4 HOH 5 105 55 HOH HOH D . F 4 HOH 6 106 45 HOH HOH D . F 4 HOH 7 107 133 HOH HOH D . F 4 HOH 8 108 243 HOH HOH D . F 4 HOH 9 109 218 HOH HOH D . F 4 HOH 10 110 29 HOH HOH D . F 4 HOH 11 111 214 HOH HOH D . F 4 HOH 12 112 9 HOH HOH D . F 4 HOH 13 113 30 HOH HOH D . F 4 HOH 14 114 19 HOH HOH D . F 4 HOH 15 115 32 HOH HOH D . F 4 HOH 16 116 242 HOH HOH D . F 4 HOH 17 117 231 HOH HOH D . F 4 HOH 18 118 175 HOH HOH D . F 4 HOH 19 119 24 HOH HOH D . F 4 HOH 20 120 4 HOH HOH D . F 4 HOH 21 121 217 HOH HOH D . F 4 HOH 22 122 49 HOH HOH D . F 4 HOH 23 123 227 HOH HOH D . F 4 HOH 24 124 39 HOH HOH D . F 4 HOH 25 125 186 HOH HOH D . F 4 HOH 26 126 208 HOH HOH D . F 4 HOH 27 127 206 HOH HOH D . F 4 HOH 28 128 130 HOH HOH D . F 4 HOH 29 129 220 HOH HOH D . G 4 HOH 1 401 244 HOH HOH A . G 4 HOH 2 402 240 HOH HOH A . G 4 HOH 3 403 37 HOH HOH A . G 4 HOH 4 404 35 HOH HOH A . G 4 HOH 5 405 61 HOH HOH A . G 4 HOH 6 406 210 HOH HOH A . G 4 HOH 7 407 74 HOH HOH A . G 4 HOH 8 408 2 HOH HOH A . G 4 HOH 9 409 81 HOH HOH A . G 4 HOH 10 410 27 HOH HOH A . G 4 HOH 11 411 59 HOH HOH A . G 4 HOH 12 412 41 HOH HOH A . G 4 HOH 13 413 87 HOH HOH A . G 4 HOH 14 414 94 HOH HOH A . G 4 HOH 15 415 225 HOH HOH A . G 4 HOH 16 416 22 HOH HOH A . G 4 HOH 17 417 16 HOH HOH A . G 4 HOH 18 418 26 HOH HOH A . G 4 HOH 19 419 6 HOH HOH A . G 4 HOH 20 420 239 HOH HOH A . G 4 HOH 21 421 69 HOH HOH A . G 4 HOH 22 422 147 HOH HOH A . G 4 HOH 23 423 144 HOH HOH A . G 4 HOH 24 424 72 HOH HOH A . G 4 HOH 25 425 38 HOH HOH A . G 4 HOH 26 426 134 HOH HOH A . H 4 HOH 1 401 209 HOH HOH B . H 4 HOH 2 402 245 HOH HOH B . H 4 HOH 3 403 223 HOH HOH B . H 4 HOH 4 404 17 HOH HOH B . H 4 HOH 5 405 1 HOH HOH B . H 4 HOH 6 406 172 HOH HOH B . H 4 HOH 7 407 78 HOH HOH B . H 4 HOH 8 408 5 HOH HOH B . H 4 HOH 9 409 7 HOH HOH B . H 4 HOH 10 410 141 HOH HOH B . H 4 HOH 11 411 47 HOH HOH B . H 4 HOH 12 412 14 HOH HOH B . H 4 HOH 13 413 44 HOH HOH B . H 4 HOH 14 414 226 HOH HOH B . H 4 HOH 15 415 48 HOH HOH B . H 4 HOH 16 416 119 HOH HOH B . H 4 HOH 17 417 58 HOH HOH B . H 4 HOH 18 418 197 HOH HOH B . H 4 HOH 19 419 97 HOH HOH B . H 4 HOH 20 420 127 HOH HOH B . H 4 HOH 21 421 215 HOH HOH B . H 4 HOH 22 422 238 HOH HOH B . H 4 HOH 23 423 159 HOH HOH B . H 4 HOH 24 424 221 HOH HOH B . H 4 HOH 25 425 53 HOH HOH B . H 4 HOH 26 426 191 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7000 ? 1 MORE -42 ? 1 'SSA (A^2)' 15190 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-03-01 2 'Structure model' 1 1 2017-05-03 3 'Structure model' 1 2 2017-09-27 4 'Structure model' 1 3 2019-12-04 5 'Structure model' 1 4 2023-10-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 4 'Structure model' 'Author supporting evidence' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' diffrn_detector 2 4 'Structure model' pdbx_audit_support 3 5 'Structure model' chem_comp_atom 4 5 'Structure model' chem_comp_bond 5 5 'Structure model' database_2 6 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_diffrn_detector.detector' 2 4 'Structure model' '_pdbx_audit_support.funding_organization' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -24.4193 _pdbx_refine_tls.origin_y 16.7252 _pdbx_refine_tls.origin_z 20.1421 _pdbx_refine_tls.T[1][1] 0.3690 _pdbx_refine_tls.T[2][2] 0.3422 _pdbx_refine_tls.T[3][3] 0.3577 _pdbx_refine_tls.T[1][2] -0.0006 _pdbx_refine_tls.T[1][3] -0.0670 _pdbx_refine_tls.T[2][3] 0.0003 _pdbx_refine_tls.L[1][1] 0.4259 _pdbx_refine_tls.L[2][2] 0.3155 _pdbx_refine_tls.L[3][3] 0.3373 _pdbx_refine_tls.L[1][2] 0.3658 _pdbx_refine_tls.L[1][3] -0.0501 _pdbx_refine_tls.L[2][3] 0.6462 _pdbx_refine_tls.S[1][1] 0.0810 _pdbx_refine_tls.S[1][2] -0.0335 _pdbx_refine_tls.S[1][3] -0.0295 _pdbx_refine_tls.S[2][1] 0.2442 _pdbx_refine_tls.S[2][2] -0.0105 _pdbx_refine_tls.S[2][3] -0.2212 _pdbx_refine_tls.S[3][1] 0.0741 _pdbx_refine_tls.S[3][2] 0.1651 _pdbx_refine_tls.S[3][3] 0.0061 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 1 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 2 ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? SERGUI ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 5 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 6 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" C DT 11 ? ? "C3'" C DT 11 ? ? 1.363 1.419 -0.056 0.006 N 2 1 "O3'" C DC 15 ? ? "C3'" C DC 15 ? ? 1.382 1.419 -0.037 0.006 N 3 1 "O3'" D DA 31 ? ? "C3'" D DA 31 ? ? 1.358 1.419 -0.061 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" C DT 18 ? ? "C1'" C DT 18 ? ? N1 C DT 18 ? ? 110.20 108.30 1.90 0.30 N 2 1 "O4'" D DG 41 ? ? "C1'" D DG 41 ? ? N9 D DG 41 ? ? 110.64 108.30 2.34 0.30 N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B LYS 311 ? CG ? D LYS 60 CG 2 1 Y 1 B LYS 311 ? CD ? D LYS 60 CD 3 1 Y 1 B LYS 311 ? CE ? D LYS 60 CE 4 1 Y 1 B LYS 311 ? NZ ? D LYS 60 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C DT 0 ? A DT 1 2 1 Y 1 A ASN 314 ? C ASN 63 3 1 Y 1 A HIS 315 ? C HIS 64 4 1 Y 1 B ASN 314 ? D ASN 63 5 1 Y 1 B HIS 315 ? D HIS 64 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5CM N1 N N N 1 5CM C2 C N N 2 5CM N3 N N N 3 5CM C4 C N N 4 5CM C5 C N N 5 5CM C5A C N N 6 5CM C6 C N N 7 5CM O2 O N N 8 5CM N4 N N N 9 5CM "C1'" C N R 10 5CM "C2'" C N N 11 5CM "C3'" C N S 12 5CM "C4'" C N R 13 5CM "O4'" O N N 14 5CM "O3'" O N N 15 5CM "C5'" C N N 16 5CM "O5'" O N N 17 5CM P P N N 18 5CM OP1 O N N 19 5CM OP2 O N N 20 5CM OP3 O N N 21 5CM H5A1 H N N 22 5CM H5A2 H N N 23 5CM H5A3 H N N 24 5CM H6 H N N 25 5CM HN41 H N N 26 5CM HN42 H N N 27 5CM "H1'" H N N 28 5CM "H2'" H N N 29 5CM "H2''" H N N 30 5CM "H3'" H N N 31 5CM "H4'" H N N 32 5CM "HO3'" H N N 33 5CM "H5'" H N N 34 5CM "H5''" H N N 35 5CM HOP2 H N N 36 5CM HOP3 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 CYS N N N N 95 CYS CA C N R 96 CYS C C N N 97 CYS O O N N 98 CYS CB C N N 99 CYS SG S N N 100 CYS OXT O N N 101 CYS H H N N 102 CYS H2 H N N 103 CYS HA H N N 104 CYS HB2 H N N 105 CYS HB3 H N N 106 CYS HG H N N 107 CYS HXT H N N 108 DA OP3 O N N 109 DA P P N N 110 DA OP1 O N N 111 DA OP2 O N N 112 DA "O5'" O N N 113 DA "C5'" C N N 114 DA "C4'" C N R 115 DA "O4'" O N N 116 DA "C3'" C N S 117 DA "O3'" O N N 118 DA "C2'" C N N 119 DA "C1'" C N R 120 DA N9 N Y N 121 DA C8 C Y N 122 DA N7 N Y N 123 DA C5 C Y N 124 DA C6 C Y N 125 DA N6 N N N 126 DA N1 N Y N 127 DA C2 C Y N 128 DA N3 N Y N 129 DA C4 C Y N 130 DA HOP3 H N N 131 DA HOP2 H N N 132 DA "H5'" H N N 133 DA "H5''" H N N 134 DA "H4'" H N N 135 DA "H3'" H N N 136 DA "HO3'" H N N 137 DA "H2'" H N N 138 DA "H2''" H N N 139 DA "H1'" H N N 140 DA H8 H N N 141 DA H61 H N N 142 DA H62 H N N 143 DA H2 H N N 144 DC OP3 O N N 145 DC P P N N 146 DC OP1 O N N 147 DC OP2 O N N 148 DC "O5'" O N N 149 DC "C5'" C N N 150 DC "C4'" C N R 151 DC "O4'" O N N 152 DC "C3'" C N S 153 DC "O3'" O N N 154 DC "C2'" C N N 155 DC "C1'" C N R 156 DC N1 N N N 157 DC C2 C N N 158 DC O2 O N N 159 DC N3 N N N 160 DC C4 C N N 161 DC N4 N N N 162 DC C5 C N N 163 DC C6 C N N 164 DC HOP3 H N N 165 DC HOP2 H N N 166 DC "H5'" H N N 167 DC "H5''" H N N 168 DC "H4'" H N N 169 DC "H3'" H N N 170 DC "HO3'" H N N 171 DC "H2'" H N N 172 DC "H2''" H N N 173 DC "H1'" H N N 174 DC H41 H N N 175 DC H42 H N N 176 DC H5 H N N 177 DC H6 H N N 178 DG OP3 O N N 179 DG P P N N 180 DG OP1 O N N 181 DG OP2 O N N 182 DG "O5'" O N N 183 DG "C5'" C N N 184 DG "C4'" C N R 185 DG "O4'" O N N 186 DG "C3'" C N S 187 DG "O3'" O N N 188 DG "C2'" C N N 189 DG "C1'" C N R 190 DG N9 N Y N 191 DG C8 C Y N 192 DG N7 N Y N 193 DG C5 C Y N 194 DG C6 C N N 195 DG O6 O N N 196 DG N1 N N N 197 DG C2 C N N 198 DG N2 N N N 199 DG N3 N N N 200 DG C4 C Y N 201 DG HOP3 H N N 202 DG HOP2 H N N 203 DG "H5'" H N N 204 DG "H5''" H N N 205 DG "H4'" H N N 206 DG "H3'" H N N 207 DG "HO3'" H N N 208 DG "H2'" H N N 209 DG "H2''" H N N 210 DG "H1'" H N N 211 DG H8 H N N 212 DG H1 H N N 213 DG H21 H N N 214 DG H22 H N N 215 DT OP3 O N N 216 DT P P N N 217 DT OP1 O N N 218 DT OP2 O N N 219 DT "O5'" O N N 220 DT "C5'" C N N 221 DT "C4'" C N R 222 DT "O4'" O N N 223 DT "C3'" C N S 224 DT "O3'" O N N 225 DT "C2'" C N N 226 DT "C1'" C N R 227 DT N1 N N N 228 DT C2 C N N 229 DT O2 O N N 230 DT N3 N N N 231 DT C4 C N N 232 DT O4 O N N 233 DT C5 C N N 234 DT C7 C N N 235 DT C6 C N N 236 DT HOP3 H N N 237 DT HOP2 H N N 238 DT "H5'" H N N 239 DT "H5''" H N N 240 DT "H4'" H N N 241 DT "H3'" H N N 242 DT "HO3'" H N N 243 DT "H2'" H N N 244 DT "H2''" H N N 245 DT "H1'" H N N 246 DT H3 H N N 247 DT H71 H N N 248 DT H72 H N N 249 DT H73 H N N 250 DT H6 H N N 251 GLN N N N N 252 GLN CA C N S 253 GLN C C N N 254 GLN O O N N 255 GLN CB C N N 256 GLN CG C N N 257 GLN CD C N N 258 GLN OE1 O N N 259 GLN NE2 N N N 260 GLN OXT O N N 261 GLN H H N N 262 GLN H2 H N N 263 GLN HA H N N 264 GLN HB2 H N N 265 GLN HB3 H N N 266 GLN HG2 H N N 267 GLN HG3 H N N 268 GLN HE21 H N N 269 GLN HE22 H N N 270 GLN HXT H N N 271 GLU N N N N 272 GLU CA C N S 273 GLU C C N N 274 GLU O O N N 275 GLU CB C N N 276 GLU CG C N N 277 GLU CD C N N 278 GLU OE1 O N N 279 GLU OE2 O N N 280 GLU OXT O N N 281 GLU H H N N 282 GLU H2 H N N 283 GLU HA H N N 284 GLU HB2 H N N 285 GLU HB3 H N N 286 GLU HG2 H N N 287 GLU HG3 H N N 288 GLU HE2 H N N 289 GLU HXT H N N 290 HIS N N N N 291 HIS CA C N S 292 HIS C C N N 293 HIS O O N N 294 HIS CB C N N 295 HIS CG C Y N 296 HIS ND1 N Y N 297 HIS CD2 C Y N 298 HIS CE1 C Y N 299 HIS NE2 N Y N 300 HIS OXT O N N 301 HIS H H N N 302 HIS H2 H N N 303 HIS HA H N N 304 HIS HB2 H N N 305 HIS HB3 H N N 306 HIS HD1 H N N 307 HIS HD2 H N N 308 HIS HE1 H N N 309 HIS HE2 H N N 310 HIS HXT H N N 311 HOH O O N N 312 HOH H1 H N N 313 HOH H2 H N N 314 ILE N N N N 315 ILE CA C N S 316 ILE C C N N 317 ILE O O N N 318 ILE CB C N S 319 ILE CG1 C N N 320 ILE CG2 C N N 321 ILE CD1 C N N 322 ILE OXT O N N 323 ILE H H N N 324 ILE H2 H N N 325 ILE HA H N N 326 ILE HB H N N 327 ILE HG12 H N N 328 ILE HG13 H N N 329 ILE HG21 H N N 330 ILE HG22 H N N 331 ILE HG23 H N N 332 ILE HD11 H N N 333 ILE HD12 H N N 334 ILE HD13 H N N 335 ILE HXT H N N 336 LEU N N N N 337 LEU CA C N S 338 LEU C C N N 339 LEU O O N N 340 LEU CB C N N 341 LEU CG C N N 342 LEU CD1 C N N 343 LEU CD2 C N N 344 LEU OXT O N N 345 LEU H H N N 346 LEU H2 H N N 347 LEU HA H N N 348 LEU HB2 H N N 349 LEU HB3 H N N 350 LEU HG H N N 351 LEU HD11 H N N 352 LEU HD12 H N N 353 LEU HD13 H N N 354 LEU HD21 H N N 355 LEU HD22 H N N 356 LEU HD23 H N N 357 LEU HXT H N N 358 LYS N N N N 359 LYS CA C N S 360 LYS C C N N 361 LYS O O N N 362 LYS CB C N N 363 LYS CG C N N 364 LYS CD C N N 365 LYS CE C N N 366 LYS NZ N N N 367 LYS OXT O N N 368 LYS H H N N 369 LYS H2 H N N 370 LYS HA H N N 371 LYS HB2 H N N 372 LYS HB3 H N N 373 LYS HG2 H N N 374 LYS HG3 H N N 375 LYS HD2 H N N 376 LYS HD3 H N N 377 LYS HE2 H N N 378 LYS HE3 H N N 379 LYS HZ1 H N N 380 LYS HZ2 H N N 381 LYS HZ3 H N N 382 LYS HXT H N N 383 MET N N N N 384 MET CA C N S 385 MET C C N N 386 MET O O N N 387 MET CB C N N 388 MET CG C N N 389 MET SD S N N 390 MET CE C N N 391 MET OXT O N N 392 MET H H N N 393 MET H2 H N N 394 MET HA H N N 395 MET HB2 H N N 396 MET HB3 H N N 397 MET HG2 H N N 398 MET HG3 H N N 399 MET HE1 H N N 400 MET HE2 H N N 401 MET HE3 H N N 402 MET HXT H N N 403 SER N N N N 404 SER CA C N S 405 SER C C N N 406 SER O O N N 407 SER CB C N N 408 SER OG O N N 409 SER OXT O N N 410 SER H H N N 411 SER H2 H N N 412 SER HA H N N 413 SER HB2 H N N 414 SER HB3 H N N 415 SER HG H N N 416 SER HXT H N N 417 THR N N N N 418 THR CA C N S 419 THR C C N N 420 THR O O N N 421 THR CB C N R 422 THR OG1 O N N 423 THR CG2 C N N 424 THR OXT O N N 425 THR H H N N 426 THR H2 H N N 427 THR HA H N N 428 THR HB H N N 429 THR HG1 H N N 430 THR HG21 H N N 431 THR HG22 H N N 432 THR HG23 H N N 433 THR HXT H N N 434 VAL N N N N 435 VAL CA C N S 436 VAL C C N N 437 VAL O O N N 438 VAL CB C N N 439 VAL CG1 C N N 440 VAL CG2 C N N 441 VAL OXT O N N 442 VAL H H N N 443 VAL H2 H N N 444 VAL HA H N N 445 VAL HB H N N 446 VAL HG11 H N N 447 VAL HG12 H N N 448 VAL HG13 H N N 449 VAL HG21 H N N 450 VAL HG22 H N N 451 VAL HG23 H N N 452 VAL HXT H N N 453 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5CM N1 C2 sing N N 1 5CM N1 C6 sing N N 2 5CM N1 "C1'" sing N N 3 5CM C2 N3 sing N N 4 5CM C2 O2 doub N N 5 5CM N3 C4 doub N N 6 5CM C4 C5 sing N N 7 5CM C4 N4 sing N N 8 5CM C5 C5A sing N N 9 5CM C5 C6 doub N N 10 5CM C5A H5A1 sing N N 11 5CM C5A H5A2 sing N N 12 5CM C5A H5A3 sing N N 13 5CM C6 H6 sing N N 14 5CM N4 HN41 sing N N 15 5CM N4 HN42 sing N N 16 5CM "C1'" "C2'" sing N N 17 5CM "C1'" "O4'" sing N N 18 5CM "C1'" "H1'" sing N N 19 5CM "C2'" "C3'" sing N N 20 5CM "C2'" "H2'" sing N N 21 5CM "C2'" "H2''" sing N N 22 5CM "C3'" "C4'" sing N N 23 5CM "C3'" "O3'" sing N N 24 5CM "C3'" "H3'" sing N N 25 5CM "C4'" "O4'" sing N N 26 5CM "C4'" "C5'" sing N N 27 5CM "C4'" "H4'" sing N N 28 5CM "O3'" "HO3'" sing N N 29 5CM "C5'" "O5'" sing N N 30 5CM "C5'" "H5'" sing N N 31 5CM "C5'" "H5''" sing N N 32 5CM "O5'" P sing N N 33 5CM P OP1 doub N N 34 5CM P OP2 sing N N 35 5CM P OP3 sing N N 36 5CM OP2 HOP2 sing N N 37 5CM OP3 HOP3 sing N N 38 ALA N CA sing N N 39 ALA N H sing N N 40 ALA N H2 sing N N 41 ALA CA C sing N N 42 ALA CA CB sing N N 43 ALA CA HA sing N N 44 ALA C O doub N N 45 ALA C OXT sing N N 46 ALA CB HB1 sing N N 47 ALA CB HB2 sing N N 48 ALA CB HB3 sing N N 49 ALA OXT HXT sing N N 50 ARG N CA sing N N 51 ARG N H sing N N 52 ARG N H2 sing N N 53 ARG CA C sing N N 54 ARG CA CB sing N N 55 ARG CA HA sing N N 56 ARG C O doub N N 57 ARG C OXT sing N N 58 ARG CB CG sing N N 59 ARG CB HB2 sing N N 60 ARG CB HB3 sing N N 61 ARG CG CD sing N N 62 ARG CG HG2 sing N N 63 ARG CG HG3 sing N N 64 ARG CD NE sing N N 65 ARG CD HD2 sing N N 66 ARG CD HD3 sing N N 67 ARG NE CZ sing N N 68 ARG NE HE sing N N 69 ARG CZ NH1 sing N N 70 ARG CZ NH2 doub N N 71 ARG NH1 HH11 sing N N 72 ARG NH1 HH12 sing N N 73 ARG NH2 HH21 sing N N 74 ARG NH2 HH22 sing N N 75 ARG OXT HXT sing N N 76 ASN N CA sing N N 77 ASN N H sing N N 78 ASN N H2 sing N N 79 ASN CA C sing N N 80 ASN CA CB sing N N 81 ASN CA HA sing N N 82 ASN C O doub N N 83 ASN C OXT sing N N 84 ASN CB CG sing N N 85 ASN CB HB2 sing N N 86 ASN CB HB3 sing N N 87 ASN CG OD1 doub N N 88 ASN CG ND2 sing N N 89 ASN ND2 HD21 sing N N 90 ASN ND2 HD22 sing N N 91 ASN OXT HXT sing N N 92 CYS N CA sing N N 93 CYS N H sing N N 94 CYS N H2 sing N N 95 CYS CA C sing N N 96 CYS CA CB sing N N 97 CYS CA HA sing N N 98 CYS C O doub N N 99 CYS C OXT sing N N 100 CYS CB SG sing N N 101 CYS CB HB2 sing N N 102 CYS CB HB3 sing N N 103 CYS SG HG sing N N 104 CYS OXT HXT sing N N 105 DA OP3 P sing N N 106 DA OP3 HOP3 sing N N 107 DA P OP1 doub N N 108 DA P OP2 sing N N 109 DA P "O5'" sing N N 110 DA OP2 HOP2 sing N N 111 DA "O5'" "C5'" sing N N 112 DA "C5'" "C4'" sing N N 113 DA "C5'" "H5'" sing N N 114 DA "C5'" "H5''" sing N N 115 DA "C4'" "O4'" sing N N 116 DA "C4'" "C3'" sing N N 117 DA "C4'" "H4'" sing N N 118 DA "O4'" "C1'" sing N N 119 DA "C3'" "O3'" sing N N 120 DA "C3'" "C2'" sing N N 121 DA "C3'" "H3'" sing N N 122 DA "O3'" "HO3'" sing N N 123 DA "C2'" "C1'" sing N N 124 DA "C2'" "H2'" sing N N 125 DA "C2'" "H2''" sing N N 126 DA "C1'" N9 sing N N 127 DA "C1'" "H1'" sing N N 128 DA N9 C8 sing Y N 129 DA N9 C4 sing Y N 130 DA C8 N7 doub Y N 131 DA C8 H8 sing N N 132 DA N7 C5 sing Y N 133 DA C5 C6 sing Y N 134 DA C5 C4 doub Y N 135 DA C6 N6 sing N N 136 DA C6 N1 doub Y N 137 DA N6 H61 sing N N 138 DA N6 H62 sing N N 139 DA N1 C2 sing Y N 140 DA C2 N3 doub Y N 141 DA C2 H2 sing N N 142 DA N3 C4 sing Y N 143 DC OP3 P sing N N 144 DC OP3 HOP3 sing N N 145 DC P OP1 doub N N 146 DC P OP2 sing N N 147 DC P "O5'" sing N N 148 DC OP2 HOP2 sing N N 149 DC "O5'" "C5'" sing N N 150 DC "C5'" "C4'" sing N N 151 DC "C5'" "H5'" sing N N 152 DC "C5'" "H5''" sing N N 153 DC "C4'" "O4'" sing N N 154 DC "C4'" "C3'" sing N N 155 DC "C4'" "H4'" sing N N 156 DC "O4'" "C1'" sing N N 157 DC "C3'" "O3'" sing N N 158 DC "C3'" "C2'" sing N N 159 DC "C3'" "H3'" sing N N 160 DC "O3'" "HO3'" sing N N 161 DC "C2'" "C1'" sing N N 162 DC "C2'" "H2'" sing N N 163 DC "C2'" "H2''" sing N N 164 DC "C1'" N1 sing N N 165 DC "C1'" "H1'" sing N N 166 DC N1 C2 sing N N 167 DC N1 C6 sing N N 168 DC C2 O2 doub N N 169 DC C2 N3 sing N N 170 DC N3 C4 doub N N 171 DC C4 N4 sing N N 172 DC C4 C5 sing N N 173 DC N4 H41 sing N N 174 DC N4 H42 sing N N 175 DC C5 C6 doub N N 176 DC C5 H5 sing N N 177 DC C6 H6 sing N N 178 DG OP3 P sing N N 179 DG OP3 HOP3 sing N N 180 DG P OP1 doub N N 181 DG P OP2 sing N N 182 DG P "O5'" sing N N 183 DG OP2 HOP2 sing N N 184 DG "O5'" "C5'" sing N N 185 DG "C5'" "C4'" sing N N 186 DG "C5'" "H5'" sing N N 187 DG "C5'" "H5''" sing N N 188 DG "C4'" "O4'" sing N N 189 DG "C4'" "C3'" sing N N 190 DG "C4'" "H4'" sing N N 191 DG "O4'" "C1'" sing N N 192 DG "C3'" "O3'" sing N N 193 DG "C3'" "C2'" sing N N 194 DG "C3'" "H3'" sing N N 195 DG "O3'" "HO3'" sing N N 196 DG "C2'" "C1'" sing N N 197 DG "C2'" "H2'" sing N N 198 DG "C2'" "H2''" sing N N 199 DG "C1'" N9 sing N N 200 DG "C1'" "H1'" sing N N 201 DG N9 C8 sing Y N 202 DG N9 C4 sing Y N 203 DG C8 N7 doub Y N 204 DG C8 H8 sing N N 205 DG N7 C5 sing Y N 206 DG C5 C6 sing N N 207 DG C5 C4 doub Y N 208 DG C6 O6 doub N N 209 DG C6 N1 sing N N 210 DG N1 C2 sing N N 211 DG N1 H1 sing N N 212 DG C2 N2 sing N N 213 DG C2 N3 doub N N 214 DG N2 H21 sing N N 215 DG N2 H22 sing N N 216 DG N3 C4 sing N N 217 DT OP3 P sing N N 218 DT OP3 HOP3 sing N N 219 DT P OP1 doub N N 220 DT P OP2 sing N N 221 DT P "O5'" sing N N 222 DT OP2 HOP2 sing N N 223 DT "O5'" "C5'" sing N N 224 DT "C5'" "C4'" sing N N 225 DT "C5'" "H5'" sing N N 226 DT "C5'" "H5''" sing N N 227 DT "C4'" "O4'" sing N N 228 DT "C4'" "C3'" sing N N 229 DT "C4'" "H4'" sing N N 230 DT "O4'" "C1'" sing N N 231 DT "C3'" "O3'" sing N N 232 DT "C3'" "C2'" sing N N 233 DT "C3'" "H3'" sing N N 234 DT "O3'" "HO3'" sing N N 235 DT "C2'" "C1'" sing N N 236 DT "C2'" "H2'" sing N N 237 DT "C2'" "H2''" sing N N 238 DT "C1'" N1 sing N N 239 DT "C1'" "H1'" sing N N 240 DT N1 C2 sing N N 241 DT N1 C6 sing N N 242 DT C2 O2 doub N N 243 DT C2 N3 sing N N 244 DT N3 C4 sing N N 245 DT N3 H3 sing N N 246 DT C4 O4 doub N N 247 DT C4 C5 sing N N 248 DT C5 C7 sing N N 249 DT C5 C6 doub N N 250 DT C7 H71 sing N N 251 DT C7 H72 sing N N 252 DT C7 H73 sing N N 253 DT C6 H6 sing N N 254 GLN N CA sing N N 255 GLN N H sing N N 256 GLN N H2 sing N N 257 GLN CA C sing N N 258 GLN CA CB sing N N 259 GLN CA HA sing N N 260 GLN C O doub N N 261 GLN C OXT sing N N 262 GLN CB CG sing N N 263 GLN CB HB2 sing N N 264 GLN CB HB3 sing N N 265 GLN CG CD sing N N 266 GLN CG HG2 sing N N 267 GLN CG HG3 sing N N 268 GLN CD OE1 doub N N 269 GLN CD NE2 sing N N 270 GLN NE2 HE21 sing N N 271 GLN NE2 HE22 sing N N 272 GLN OXT HXT sing N N 273 GLU N CA sing N N 274 GLU N H sing N N 275 GLU N H2 sing N N 276 GLU CA C sing N N 277 GLU CA CB sing N N 278 GLU CA HA sing N N 279 GLU C O doub N N 280 GLU C OXT sing N N 281 GLU CB CG sing N N 282 GLU CB HB2 sing N N 283 GLU CB HB3 sing N N 284 GLU CG CD sing N N 285 GLU CG HG2 sing N N 286 GLU CG HG3 sing N N 287 GLU CD OE1 doub N N 288 GLU CD OE2 sing N N 289 GLU OE2 HE2 sing N N 290 GLU OXT HXT sing N N 291 HIS N CA sing N N 292 HIS N H sing N N 293 HIS N H2 sing N N 294 HIS CA C sing N N 295 HIS CA CB sing N N 296 HIS CA HA sing N N 297 HIS C O doub N N 298 HIS C OXT sing N N 299 HIS CB CG sing N N 300 HIS CB HB2 sing N N 301 HIS CB HB3 sing N N 302 HIS CG ND1 sing Y N 303 HIS CG CD2 doub Y N 304 HIS ND1 CE1 doub Y N 305 HIS ND1 HD1 sing N N 306 HIS CD2 NE2 sing Y N 307 HIS CD2 HD2 sing N N 308 HIS CE1 NE2 sing Y N 309 HIS CE1 HE1 sing N N 310 HIS NE2 HE2 sing N N 311 HIS OXT HXT sing N N 312 HOH O H1 sing N N 313 HOH O H2 sing N N 314 ILE N CA sing N N 315 ILE N H sing N N 316 ILE N H2 sing N N 317 ILE CA C sing N N 318 ILE CA CB sing N N 319 ILE CA HA sing N N 320 ILE C O doub N N 321 ILE C OXT sing N N 322 ILE CB CG1 sing N N 323 ILE CB CG2 sing N N 324 ILE CB HB sing N N 325 ILE CG1 CD1 sing N N 326 ILE CG1 HG12 sing N N 327 ILE CG1 HG13 sing N N 328 ILE CG2 HG21 sing N N 329 ILE CG2 HG22 sing N N 330 ILE CG2 HG23 sing N N 331 ILE CD1 HD11 sing N N 332 ILE CD1 HD12 sing N N 333 ILE CD1 HD13 sing N N 334 ILE OXT HXT sing N N 335 LEU N CA sing N N 336 LEU N H sing N N 337 LEU N H2 sing N N 338 LEU CA C sing N N 339 LEU CA CB sing N N 340 LEU CA HA sing N N 341 LEU C O doub N N 342 LEU C OXT sing N N 343 LEU CB CG sing N N 344 LEU CB HB2 sing N N 345 LEU CB HB3 sing N N 346 LEU CG CD1 sing N N 347 LEU CG CD2 sing N N 348 LEU CG HG sing N N 349 LEU CD1 HD11 sing N N 350 LEU CD1 HD12 sing N N 351 LEU CD1 HD13 sing N N 352 LEU CD2 HD21 sing N N 353 LEU CD2 HD22 sing N N 354 LEU CD2 HD23 sing N N 355 LEU OXT HXT sing N N 356 LYS N CA sing N N 357 LYS N H sing N N 358 LYS N H2 sing N N 359 LYS CA C sing N N 360 LYS CA CB sing N N 361 LYS CA HA sing N N 362 LYS C O doub N N 363 LYS C OXT sing N N 364 LYS CB CG sing N N 365 LYS CB HB2 sing N N 366 LYS CB HB3 sing N N 367 LYS CG CD sing N N 368 LYS CG HG2 sing N N 369 LYS CG HG3 sing N N 370 LYS CD CE sing N N 371 LYS CD HD2 sing N N 372 LYS CD HD3 sing N N 373 LYS CE NZ sing N N 374 LYS CE HE2 sing N N 375 LYS CE HE3 sing N N 376 LYS NZ HZ1 sing N N 377 LYS NZ HZ2 sing N N 378 LYS NZ HZ3 sing N N 379 LYS OXT HXT sing N N 380 MET N CA sing N N 381 MET N H sing N N 382 MET N H2 sing N N 383 MET CA C sing N N 384 MET CA CB sing N N 385 MET CA HA sing N N 386 MET C O doub N N 387 MET C OXT sing N N 388 MET CB CG sing N N 389 MET CB HB2 sing N N 390 MET CB HB3 sing N N 391 MET CG SD sing N N 392 MET CG HG2 sing N N 393 MET CG HG3 sing N N 394 MET SD CE sing N N 395 MET CE HE1 sing N N 396 MET CE HE2 sing N N 397 MET CE HE3 sing N N 398 MET OXT HXT sing N N 399 SER N CA sing N N 400 SER N H sing N N 401 SER N H2 sing N N 402 SER CA C sing N N 403 SER CA CB sing N N 404 SER CA HA sing N N 405 SER C O doub N N 406 SER C OXT sing N N 407 SER CB OG sing N N 408 SER CB HB2 sing N N 409 SER CB HB3 sing N N 410 SER OG HG sing N N 411 SER OXT HXT sing N N 412 THR N CA sing N N 413 THR N H sing N N 414 THR N H2 sing N N 415 THR CA C sing N N 416 THR CA CB sing N N 417 THR CA HA sing N N 418 THR C O doub N N 419 THR C OXT sing N N 420 THR CB OG1 sing N N 421 THR CB CG2 sing N N 422 THR CB HB sing N N 423 THR OG1 HG1 sing N N 424 THR CG2 HG21 sing N N 425 THR CG2 HG22 sing N N 426 THR CG2 HG23 sing N N 427 THR OXT HXT sing N N 428 VAL N CA sing N N 429 VAL N H sing N N 430 VAL N H2 sing N N 431 VAL CA C sing N N 432 VAL CA CB sing N N 433 VAL CA HA sing N N 434 VAL C O doub N N 435 VAL C OXT sing N N 436 VAL CB CG1 sing N N 437 VAL CB CG2 sing N N 438 VAL CB HB sing N N 439 VAL CG1 HG11 sing N N 440 VAL CG1 HG12 sing N N 441 VAL CG1 HG13 sing N N 442 VAL CG2 HG21 sing N N 443 VAL CG2 HG22 sing N N 444 VAL CG2 HG23 sing N N 445 VAL OXT HXT sing N N 446 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5T01 'double helix' 5T01 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 2 1_555 B DG 19 1_555 0.222 -0.177 0.513 12.610 -28.603 -3.182 1 C_DC1:DG41_D C 1 ? D 41 ? 19 1 1 A DT 3 1_555 B DA 18 1_555 -0.139 -0.204 -0.042 2.236 -16.149 -0.010 2 C_DT2:DA40_D C 2 ? D 40 ? 20 1 1 A DC 4 1_555 B DG 17 1_555 0.343 -0.085 -0.092 6.694 -14.954 3.881 3 C_DC3:DG39_D C 3 ? D 39 ? 19 1 1 A DC 5 1_555 B DG 16 1_555 0.133 -0.176 0.191 -6.379 -12.748 -0.804 4 C_DC4:DG38_D C 4 ? D 38 ? 19 1 1 A DT 6 1_555 B DA 15 1_555 -0.130 -0.178 0.007 -2.390 -11.488 -3.395 5 C_DT5:DA37_D C 5 ? D 37 ? 20 1 1 A DA 7 1_555 B DT 14 1_555 0.189 -0.136 -0.048 -10.080 -6.527 3.229 6 C_DA6:DT36_D C 6 ? D 36 ? 20 1 1 A DT 8 1_555 B DA 13 1_555 -0.155 -0.147 0.058 0.337 -11.116 -1.958 7 C_DT7:DA35_D C 7 ? D 35 ? 20 1 1 A DG 9 1_555 B DC 12 1_555 -0.424 -0.136 -0.027 -0.157 -8.515 -0.717 8 C_DG8:DC34_D C 8 ? D 34 ? 19 1 1 A DA 10 1_555 B DT 11 1_555 -0.122 -0.170 0.128 0.508 -14.556 4.307 9 C_DA9:DT33_D C 9 ? D 33 ? 20 1 1 A DC 11 1_555 B DG 10 1_555 0.355 -0.274 0.346 -8.540 -10.200 -1.025 10 C_DC10:DG32_D C 10 ? D 32 ? 19 1 1 A DT 12 1_555 B DA 9 1_555 -0.216 -0.097 0.160 -7.485 -9.879 1.409 11 C_DT11:DA31_D C 11 ? D 31 ? 20 1 1 A DC 13 1_555 B DG 8 1_555 0.203 -0.204 0.071 -1.428 -7.405 -3.695 12 C_DC12:DG30_D C 12 ? D 30 ? 19 1 1 A DG 14 1_555 B 5CM 7 1_555 -0.320 -0.167 -0.060 -0.225 -7.988 -0.247 13 C_DG13:5CM29_D C 13 ? D 29 ? 19 1 1 A DT 15 1_555 B DA 6 1_555 0.023 -0.139 0.052 6.574 -13.995 4.042 14 C_DT14:DA28_D C 14 ? D 28 ? 20 1 1 A DC 16 1_555 B DG 5 1_555 0.278 -0.212 -0.127 2.961 -16.814 1.036 15 C_DC15:DG27_D C 15 ? D 27 ? 19 1 1 A DC 17 1_555 B DG 4 1_555 0.220 -0.213 0.382 -14.261 -6.968 -0.810 16 C_DC16:DG26_D C 16 ? D 26 ? 19 1 1 A DA 18 1_555 B DT 3 1_555 0.166 -0.132 -0.124 -9.596 -7.741 4.528 17 C_DA17:DT25_D C 17 ? D 25 ? 20 1 1 A DT 19 1_555 B DA 2 1_555 -0.050 -0.136 -0.112 3.160 -5.309 1.537 18 C_DT18:DA24_D C 18 ? D 24 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 2 1_555 B DG 19 1_555 A DT 3 1_555 B DA 18 1_555 -1.077 -1.013 3.533 4.031 7.521 30.803 -3.239 2.706 3.045 13.829 -7.413 31.935 1 CC_DC1DT2:DA40DG41_DD C 1 ? D 41 ? C 2 ? D 40 ? 1 A DT 3 1_555 B DA 18 1_555 A DC 4 1_555 B DG 17 1_555 0.138 -0.179 3.175 1.040 5.551 32.807 -1.208 -0.074 3.107 9.737 -1.824 33.276 2 CC_DT2DC3:DG39DA40_DD C 2 ? D 40 ? C 3 ? D 39 ? 1 A DC 4 1_555 B DG 17 1_555 A DC 5 1_555 B DG 16 1_555 0.054 -0.219 3.472 -1.262 6.422 33.905 -1.419 -0.298 3.372 10.887 2.140 34.513 3 CC_DC3DC4:DG38DG39_DD C 3 ? D 39 ? C 4 ? D 38 ? 1 A DC 5 1_555 B DG 16 1_555 A DT 6 1_555 B DA 15 1_555 -0.518 -0.267 3.245 1.737 5.192 32.448 -1.343 1.207 3.134 9.210 -3.081 32.894 4 CC_DC4DT5:DA37DG38_DD C 4 ? D 38 ? C 5 ? D 37 ? 1 A DT 6 1_555 B DA 15 1_555 A DA 7 1_555 B DT 14 1_555 0.439 0.483 3.390 0.102 4.228 45.645 0.237 -0.554 3.420 5.436 -0.131 45.830 5 CC_DT5DA6:DT36DA37_DD C 5 ? D 37 ? C 6 ? D 36 ? 1 A DA 7 1_555 B DT 14 1_555 A DT 8 1_555 B DA 13 1_555 -0.497 -0.442 3.034 -0.207 1.940 24.467 -1.592 1.110 2.995 4.568 0.488 24.543 6 CC_DA6DT7:DA35DT36_DD C 6 ? D 36 ? C 7 ? D 35 ? 1 A DT 8 1_555 B DA 13 1_555 A DG 9 1_555 B DC 12 1_555 -0.559 0.668 3.236 -3.264 6.319 37.935 0.220 0.438 3.335 9.617 4.968 38.571 7 CC_DT7DG8:DC34DA35_DD C 7 ? D 35 ? C 8 ? D 34 ? 1 A DG 9 1_555 B DC 12 1_555 A DA 10 1_555 B DT 11 1_555 0.395 -0.116 3.243 -2.350 6.517 36.697 -1.030 -0.923 3.147 10.239 3.692 37.323 8 CC_DG8DA9:DT33DC34_DD C 8 ? D 34 ? C 9 ? D 33 ? 1 A DA 10 1_555 B DT 11 1_555 A DC 11 1_555 B DG 10 1_555 -0.388 -0.585 3.497 -2.919 -1.151 34.602 -0.790 0.170 3.534 -1.931 4.895 34.740 9 CC_DA9DC10:DG32DT33_DD C 9 ? D 33 ? C 10 ? D 32 ? 1 A DC 11 1_555 B DG 10 1_555 A DT 12 1_555 B DA 9 1_555 0.555 -0.197 3.266 4.960 4.823 34.614 -1.045 -0.176 3.256 8.007 -8.234 35.278 10 CC_DC10DT11:DA31DG32_DD C 10 ? D 32 ? C 11 ? D 31 ? 1 A DT 12 1_555 B DA 9 1_555 A DC 13 1_555 B DG 8 1_555 -0.628 -0.101 3.266 1.265 2.138 31.163 -0.589 1.404 3.225 3.971 -2.350 31.259 11 CC_DT11DC12:DG30DA31_DD C 11 ? D 31 ? C 12 ? D 30 ? 1 A DC 13 1_555 B DG 8 1_555 A DG 14 1_555 B 5CM 7 1_555 0.792 0.723 3.376 3.494 1.916 38.392 0.846 -0.747 3.463 2.904 -5.295 38.590 12 CC_DC12DG13:5CM29DG30_DD C 12 ? D 30 ? C 13 ? D 29 ? 1 A DG 14 1_555 B 5CM 7 1_555 A DT 15 1_555 B DA 6 1_555 0.128 -0.414 3.157 -1.989 2.204 29.250 -1.270 -0.661 3.103 4.349 3.925 29.397 13 CC_DG13DT14:DA285CM29_DD C 13 ? D 29 ? C 14 ? D 28 ? 1 A DT 15 1_555 B DA 6 1_555 A DC 16 1_555 B DG 5 1_555 -0.313 -0.223 3.338 0.740 0.660 39.011 -0.416 0.559 3.327 0.989 -1.108 39.023 14 CC_DT14DC15:DG27DA28_DD C 14 ? D 28 ? C 15 ? D 27 ? 1 A DC 16 1_555 B DG 5 1_555 A DC 17 1_555 B DG 4 1_555 -0.310 -0.723 3.698 -3.729 8.294 33.567 -2.620 -0.115 3.441 14.045 6.314 34.742 15 CC_DC15DC16:DG26DG27_DD C 15 ? D 27 ? C 16 ? D 26 ? 1 A DC 17 1_555 B DG 4 1_555 A DA 18 1_555 B DT 3 1_555 1.142 0.640 3.169 6.888 5.298 37.736 0.307 -0.867 3.375 8.060 -10.481 38.688 16 CC_DC16DA17:DT25DG26_DD C 16 ? D 26 ? C 17 ? D 25 ? 1 A DA 18 1_555 B DT 3 1_555 A DT 19 1_555 B DA 2 1_555 -0.170 -0.159 2.992 0.725 5.346 23.118 -1.992 0.632 2.875 13.111 -1.778 23.731 17 CC_DA17DT18:DA24DT25_DD C 17 ? D 25 ? C 18 ? D 24 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1FOS _pdbx_initial_refinement_model.details ? #