HEADER TRANSFERASE/TRANSFERASE INHIBITOR 24-AUG-16 5T2Y TITLE CRYSTAL STRUCTURE OF C. JEJUNI PGLD IN COMPLEX WITH 5-METHYL-4- TITLE 2 (METHYLAMINO)-2-PHENETHYLTHIENO[2,3-D]PYRIMIDINE-6-CARBOXYLIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: UDP-N-ACETYLBACILLOSAMINE N-ACETYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PROTEIN GLYCOSYLATION D,UDP-4-AMINO-4,6-DIDEOXY-N-ACETYL- COMPND 5 ALPHA-D-GLUCOSAMINE N-ACETYLTRANSFERASE; COMPND 6 EC: 2.3.1.203; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAMPYLOBACTER JEJUNI SUBSP. JEJUNI SEROTYPE O:2 SOURCE 3 (STRAIN ATCC 700819 / NCTC 11168); SOURCE 4 ORGANISM_TAXID: 192222; SOURCE 5 STRAIN: ATCC 700819 / NCTC 11168; SOURCE 6 GENE: PGLD, CJ1123C; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CAMPYLOBACTER JEJUNI BACTERIAL ACETYLTRANSFERASE INHIBITOR COMPLEX, KEYWDS 2 TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.W.DE SCHUTTER,B.IMPERIALI REVDAT 5 06-MAR-24 5T2Y 1 REMARK REVDAT 4 27-NOV-19 5T2Y 1 REMARK REVDAT 3 20-SEP-17 5T2Y 1 REMARK REVDAT 2 22-MAR-17 5T2Y 1 JRNL REVDAT 1 22-FEB-17 5T2Y 0 JRNL AUTH J.W.DE SCHUTTER,J.P.MORRISON,M.J.MORRISON,A.CIULLI, JRNL AUTH 2 B.IMPERIALI JRNL TITL TARGETING BACILLOSAMINE BIOSYNTHESIS IN BACTERIAL PATHOGENS: JRNL TITL 2 DEVELOPMENT OF INHIBITORS TO A BACTERIAL AMINO-SUGAR JRNL TITL 3 ACETYLTRANSFERASE FROM CAMPYLOBACTER JEJUNI. JRNL REF J. MED. CHEM. V. 60 2099 2017 JRNL REFN ISSN 1520-4804 JRNL PMID 28182413 JRNL DOI 10.1021/ACS.JMEDCHEM.6B01869 REMARK 2 REMARK 2 RESOLUTION. 1.94 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2155) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.94 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 43477 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.154 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.750 REMARK 3 FREE R VALUE TEST SET COUNT : 1632 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 18.4811 - 4.4245 0.95 3481 141 0.1372 0.1739 REMARK 3 2 4.4245 - 3.5198 0.95 3505 142 0.1199 0.1668 REMARK 3 3 3.5198 - 3.0772 0.95 3465 130 0.1384 0.1954 REMARK 3 4 3.0772 - 2.7969 0.95 3528 146 0.1448 0.2178 REMARK 3 5 2.7969 - 2.5970 0.95 3473 128 0.1686 0.2170 REMARK 3 6 2.5970 - 2.4442 0.94 3496 135 0.1704 0.2071 REMARK 3 7 2.4442 - 2.3221 0.95 3470 138 0.1732 0.1806 REMARK 3 8 2.3221 - 2.2212 0.95 3489 128 0.1811 0.1933 REMARK 3 9 2.2212 - 2.1358 0.95 3500 135 0.1836 0.2158 REMARK 3 10 2.1358 - 2.0622 0.94 3442 138 0.1910 0.2000 REMARK 3 11 2.0622 - 1.9978 0.94 3479 136 0.2120 0.2340 REMARK 3 12 1.9978 - 1.9407 0.95 3477 134 0.2279 0.2696 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.630 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3000 REMARK 3 ANGLE : 0.958 4034 REMARK 3 CHIRALITY : 0.071 459 REMARK 3 PLANARITY : 0.005 555 REMARK 3 DIHEDRAL : 12.676 1808 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5T2Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-AUG-16. REMARK 100 THE DEPOSITION ID IS D_1000223546. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 173 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43477 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.94 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.72000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.680 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG-3350 0.1M NAF 10% GLYCEROL, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 160.04400 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 92.40145 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 184.80289 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 213.39200 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 184.80289 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -53.34800 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 277.20434 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 LYS A 38 REMARK 465 GLY A 39 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 465 LYS B 38 REMARK 465 GLY B 39 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 37 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 41 CG CD CE NZ REMARK 470 SER A 44 CB OG REMARK 470 GLU A 93 CG CD OE1 OE2 REMARK 470 LYS A 179 CD CE NZ REMARK 470 GLU B 5 CG CD OE1 OE2 REMARK 470 LYS B 29 CD CE NZ REMARK 470 LYS B 41 CG CD CE NZ REMARK 470 LYS B 67 CE NZ REMARK 470 LYS B 179 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O1 753 A 201 O1 GOL A 203 1.27 REMARK 500 O HOH B 413 O HOH B 442 2.04 REMARK 500 O HOH A 306 O HOH A 399 2.05 REMARK 500 O HOH A 341 O HOH A 435 2.08 REMARK 500 O HOH B 367 O HOH B 390 2.11 REMARK 500 O HOH A 430 O HOH A 439 2.11 REMARK 500 OG SER A 88 O HOH A 301 2.12 REMARK 500 O HOH A 457 O HOH B 430 2.12 REMARK 500 O HOH B 474 O HOH B 479 2.12 REMARK 500 O HOH B 448 O HOH B 471 2.13 REMARK 500 O HOH B 382 O HOH B 459 2.14 REMARK 500 O HOH B 381 O HOH B 383 2.14 REMARK 500 O HOH A 319 O HOH A 350 2.15 REMARK 500 O HOH B 433 O HOH B 457 2.15 REMARK 500 O HOH A 477 O HOH A 479 2.15 REMARK 500 O HOH A 331 O HOH A 400 2.15 REMARK 500 O HOH B 365 O HOH B 403 2.18 REMARK 500 O HOH A 368 O HOH A 402 2.18 REMARK 500 O3 GOL B 202 O HOH B 301 2.19 REMARK 500 O HOH A 424 O HOH A 438 2.19 REMARK 500 O HOH B 387 O HOH B 420 2.19 REMARK 500 O HOH A 468 O HOH A 473 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 410 O HOH A 410 2765 1.95 REMARK 500 OD1 ASP A 36 OH TYR B 49 1554 2.07 REMARK 500 O HOH A 378 O HOH A 429 2765 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 36 -35.17 76.85 REMARK 500 GLU A 126 -0.60 73.34 REMARK 500 SER B 13 -165.92 -69.88 REMARK 500 ASN B 71 10.78 -65.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 479 DISTANCE = 6.52 ANGSTROMS REMARK 525 HOH A 480 DISTANCE = 8.15 ANGSTROMS REMARK 525 HOH B 480 DISTANCE = 6.61 ANGSTROMS REMARK 525 HOH B 481 DISTANCE = 7.12 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 753 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 753 B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS B 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3BSY RELATED DB: PDB REMARK 900 RELATED ID: 3BSS RELATED DB: PDB DBREF 5T2Y A 1 195 UNP Q0P9D1 PGLD_CAMJE 1 195 DBREF 5T2Y B 1 195 UNP Q0P9D1 PGLD_CAMJE 1 195 SEQADV 5T2Y GLY A -2 UNP Q0P9D1 EXPRESSION TAG SEQADV 5T2Y SER A -1 UNP Q0P9D1 EXPRESSION TAG SEQADV 5T2Y ALA A 0 UNP Q0P9D1 EXPRESSION TAG SEQADV 5T2Y GLY B -2 UNP Q0P9D1 EXPRESSION TAG SEQADV 5T2Y SER B -1 UNP Q0P9D1 EXPRESSION TAG SEQADV 5T2Y ALA B 0 UNP Q0P9D1 EXPRESSION TAG SEQRES 1 A 198 GLY SER ALA MET ALA ARG THR GLU LYS ILE TYR ILE TYR SEQRES 2 A 198 GLY ALA SER GLY HIS GLY LEU VAL CYS GLU ASP VAL ALA SEQRES 3 A 198 LYS ASN MET GLY TYR LYS GLU CYS ILE PHE LEU ASP ASP SEQRES 4 A 198 PHE LYS GLY MET LYS PHE GLU SER THR LEU PRO LYS TYR SEQRES 5 A 198 ASP PHE PHE ILE ALA ILE GLY ASN ASN GLU ILE ARG LYS SEQRES 6 A 198 LYS ILE TYR GLN LYS ILE SER GLU ASN GLY PHE LYS ILE SEQRES 7 A 198 VAL ASN LEU ILE HIS LYS SER ALA LEU ILE SER PRO SER SEQRES 8 A 198 ALA ILE VAL GLU GLU ASN ALA GLY ILE LEU ILE MET PRO SEQRES 9 A 198 TYR VAL VAL ILE ASN ALA LYS ALA LYS ILE GLU LYS GLY SEQRES 10 A 198 VAL ILE LEU ASN THR SER SER VAL ILE GLU HIS GLU CYS SEQRES 11 A 198 VAL ILE GLY GLU PHE SER HIS VAL SER VAL GLY ALA LYS SEQRES 12 A 198 CYS ALA GLY ASN VAL LYS ILE GLY LYS ASN CYS PHE LEU SEQRES 13 A 198 GLY ILE ASN SER CYS VAL LEU PRO ASN LEU SER LEU ALA SEQRES 14 A 198 ASP ASP SER ILE LEU GLY GLY GLY ALA THR LEU VAL LYS SEQRES 15 A 198 ASN GLN ASP GLU LYS GLY VAL PHE VAL GLY VAL PRO ALA SEQRES 16 A 198 LYS ARG MET SEQRES 1 B 198 GLY SER ALA MET ALA ARG THR GLU LYS ILE TYR ILE TYR SEQRES 2 B 198 GLY ALA SER GLY HIS GLY LEU VAL CYS GLU ASP VAL ALA SEQRES 3 B 198 LYS ASN MET GLY TYR LYS GLU CYS ILE PHE LEU ASP ASP SEQRES 4 B 198 PHE LYS GLY MET LYS PHE GLU SER THR LEU PRO LYS TYR SEQRES 5 B 198 ASP PHE PHE ILE ALA ILE GLY ASN ASN GLU ILE ARG LYS SEQRES 6 B 198 LYS ILE TYR GLN LYS ILE SER GLU ASN GLY PHE LYS ILE SEQRES 7 B 198 VAL ASN LEU ILE HIS LYS SER ALA LEU ILE SER PRO SER SEQRES 8 B 198 ALA ILE VAL GLU GLU ASN ALA GLY ILE LEU ILE MET PRO SEQRES 9 B 198 TYR VAL VAL ILE ASN ALA LYS ALA LYS ILE GLU LYS GLY SEQRES 10 B 198 VAL ILE LEU ASN THR SER SER VAL ILE GLU HIS GLU CYS SEQRES 11 B 198 VAL ILE GLY GLU PHE SER HIS VAL SER VAL GLY ALA LYS SEQRES 12 B 198 CYS ALA GLY ASN VAL LYS ILE GLY LYS ASN CYS PHE LEU SEQRES 13 B 198 GLY ILE ASN SER CYS VAL LEU PRO ASN LEU SER LEU ALA SEQRES 14 B 198 ASP ASP SER ILE LEU GLY GLY GLY ALA THR LEU VAL LYS SEQRES 15 B 198 ASN GLN ASP GLU LYS GLY VAL PHE VAL GLY VAL PRO ALA SEQRES 16 B 198 LYS ARG MET HET 753 A 201 23 HET GOL A 202 6 HET GOL A 203 6 HET DMS A 204 4 HET 753 B 201 23 HET GOL B 202 6 HET DMS B 203 4 HETNAM 753 5-METHYL-4-(METHYLAMINO)-2-(2-PHENYLETHYL)THIENO[2,3- HETNAM 2 753 D]PYRIMIDINE-6-CARBOXYLIC ACID HETNAM GOL GLYCEROL HETNAM DMS DIMETHYL SULFOXIDE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 753 2(C17 H17 N3 O2 S) FORMUL 4 GOL 3(C3 H8 O3) FORMUL 6 DMS 2(C2 H6 O S) FORMUL 10 HOH *361(H2 O) HELIX 1 AA1 SER A 13 GLY A 27 1 15 HELIX 2 AA2 ASN A 57 ASN A 71 1 15 HELIX 3 AA3 SER B 13 GLY B 27 1 15 HELIX 4 AA4 ASN B 57 ASN B 71 1 15 SHEET 1 AA1 3 GLU A 30 LEU A 34 0 SHEET 2 AA1 3 LYS A 6 TYR A 10 1 N ILE A 7 O ILE A 32 SHEET 3 AA1 3 ASP A 50 ILE A 53 1 O ASP A 50 N TYR A 8 SHEET 1 AA2 8 LEU A 78 ILE A 79 0 SHEET 2 AA2 8 LEU A 98 ILE A 99 1 O ILE A 99 N LEU A 78 SHEET 3 AA2 8 ILE A 116 LEU A 117 1 O LEU A 117 N LEU A 98 SHEET 4 AA2 8 HIS A 134 VAL A 135 1 O VAL A 135 N ILE A 116 SHEET 5 AA2 8 PHE A 152 LEU A 153 1 O LEU A 153 N HIS A 134 SHEET 6 AA2 8 ILE A 170 LEU A 171 1 O LEU A 171 N PHE A 152 SHEET 7 AA2 8 VAL A 186 VAL A 188 1 O PHE A 187 N ILE A 170 SHEET 8 AA2 8 LYS A 193 ARG A 194 -1 O LYS A 193 N VAL A 188 SHEET 1 AA3 6 LEU A 84 ILE A 85 0 SHEET 2 AA3 6 VAL A 104 ILE A 105 1 O ILE A 105 N LEU A 84 SHEET 3 AA3 6 VAL A 122 ILE A 123 1 O ILE A 123 N VAL A 104 SHEET 4 AA3 6 LYS A 140 CYS A 141 1 O CYS A 141 N VAL A 122 SHEET 5 AA3 6 CYS A 158 VAL A 159 1 O VAL A 159 N LYS A 140 SHEET 6 AA3 6 THR A 176 LEU A 177 1 O LEU A 177 N CYS A 158 SHEET 1 AA4 5 ILE A 90 VAL A 91 0 SHEET 2 AA4 5 LYS A 110 ILE A 111 1 O ILE A 111 N ILE A 90 SHEET 3 AA4 5 VAL A 128 ILE A 129 1 O ILE A 129 N LYS A 110 SHEET 4 AA4 5 LYS A 146 ILE A 147 1 O ILE A 147 N VAL A 128 SHEET 5 AA4 5 SER A 164 LEU A 165 1 O LEU A 165 N LYS A 146 SHEET 1 AA5 4 GLU B 30 LEU B 34 0 SHEET 2 AA5 4 LYS B 6 TYR B 10 1 N ILE B 7 O ILE B 32 SHEET 3 AA5 4 ASP B 50 ILE B 53 1 O PHE B 52 N TYR B 10 SHEET 4 AA5 4 LYS B 74 ILE B 75 1 O LYS B 74 N PHE B 51 SHEET 1 AA6 8 LEU B 78 ILE B 79 0 SHEET 2 AA6 8 LEU B 98 ILE B 99 1 O ILE B 99 N LEU B 78 SHEET 3 AA6 8 ILE B 116 LEU B 117 1 O LEU B 117 N LEU B 98 SHEET 4 AA6 8 HIS B 134 VAL B 135 1 O VAL B 135 N ILE B 116 SHEET 5 AA6 8 PHE B 152 LEU B 153 1 O LEU B 153 N HIS B 134 SHEET 6 AA6 8 ILE B 170 LEU B 171 1 O LEU B 171 N PHE B 152 SHEET 7 AA6 8 VAL B 186 VAL B 188 1 O PHE B 187 N ILE B 170 SHEET 8 AA6 8 LYS B 193 ARG B 194 -1 O LYS B 193 N VAL B 188 SHEET 1 AA7 6 LEU B 84 ILE B 85 0 SHEET 2 AA7 6 VAL B 104 ILE B 105 1 O ILE B 105 N LEU B 84 SHEET 3 AA7 6 VAL B 122 ILE B 123 1 O ILE B 123 N VAL B 104 SHEET 4 AA7 6 LYS B 140 CYS B 141 1 O CYS B 141 N VAL B 122 SHEET 5 AA7 6 CYS B 158 VAL B 159 1 O VAL B 159 N LYS B 140 SHEET 6 AA7 6 THR B 176 LEU B 177 1 O LEU B 177 N CYS B 158 SHEET 1 AA8 5 ILE B 90 VAL B 91 0 SHEET 2 AA8 5 LYS B 110 ILE B 111 1 O ILE B 111 N ILE B 90 SHEET 3 AA8 5 VAL B 128 ILE B 129 1 O ILE B 129 N LYS B 110 SHEET 4 AA8 5 LYS B 146 ILE B 147 1 O ILE B 147 N VAL B 128 SHEET 5 AA8 5 SER B 164 LEU B 165 1 O LEU B 165 N LYS B 146 CISPEP 1 VAL A 190 PRO A 191 0 6.57 CISPEP 2 VAL B 190 PRO B 191 0 -3.08 SITE 1 AC1 13 SER A 136 GLY A 154 ILE A 155 LEU A 160 SITE 2 AC1 13 PRO A 161 GLY A 173 VAL A 178 VAL A 188 SITE 3 AC1 13 PRO A 191 GOL A 203 HOH A 349 HOH A 359 SITE 4 AC1 13 HOH A 398 SITE 1 AC2 4 HOH A 340 HOH A 344 HOH A 382 HOH A 398 SITE 1 AC3 9 HIS A 125 SER A 136 ALA A 142 GLY A 143 SITE 2 AC3 9 PRO A 161 753 A 201 HOH A 359 HOH A 370 SITE 3 AC3 9 HOH A 378 SITE 1 AC4 2 PRO A 101 ASN A 106 SITE 1 AC5 9 SER B 136 PHE B 152 GLY B 154 ILE B 155 SITE 2 AC5 9 GLY B 173 HOH B 308 HOH B 325 HOH B 354 SITE 3 AC5 9 HOH B 357 SITE 1 AC6 3 HOH B 301 HOH B 323 HOH B 357 SITE 1 AC7 5 LEU B 84 SER B 86 ILE B 105 ASN B 106 SITE 2 AC7 5 HOH B 470 CRYST1 106.696 106.696 46.941 90.00 90.00 120.00 P 3 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009372 0.005411 0.000000 0.00000 SCALE2 0.000000 0.010822 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021303 0.00000