HEADER IMMUNE SYSTEM 06-SEP-16 5T80 TITLE CRYSTAL STRUCTURE OF 10E8 FAB IN COMPLEX WITH THE MPER EPITOPE TITLE 2 SCAFFOLD T117V2 AND PHOSPHATIDIC ACID (06:0 PA) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTIBODY 10E8 FAB HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ANTIBODY 10E8 FAB LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: 10E8 EPITOPE SCAFFOLD T117V2; COMPND 11 CHAIN: G; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 GENE: IGHV3-15*05; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 7 EXPRESSION_SYSTEM_CELL_LINE: HEK 293S; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PHCMV3; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: IGLV3-19*01; SOURCE 14 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 16 EXPRESSION_SYSTEM_CELL: HEK 293S; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PHCMV3; SOURCE 19 MOL_ID: 3; SOURCE 20 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 21 ORGANISM_TAXID: 32630; SOURCE 22 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 23 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 24 EXPRESSION_SYSTEM_STRAIN: BL-21 STAR; SOURCE 25 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 26 EXPRESSION_SYSTEM_PLASMID: PET29 KEYWDS HIV-1 GP41 MPER, 10E8 FAB, LIPID MEMBRANE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR A.IRIMIA,I.A.WILSON REVDAT 4 04-OCT-23 5T80 1 REMARK REVDAT 3 11-DEC-19 5T80 1 REMARK REVDAT 2 20-SEP-17 5T80 1 REMARK REVDAT 1 08-MAR-17 5T80 0 JRNL AUTH A.IRIMIA,A.M.SERRA,A.SARKAR,R.JACAK,O.KALYUZHNIY,D.SOK, JRNL AUTH 2 K.L.SAYE-FRANCISCO,T.SCHIFFNER,R.TINGLE,M.KUBITZ,Y.ADACHI, JRNL AUTH 3 R.L.STANFIELD,M.C.DELLER,D.R.BURTON,W.R.SCHIEF,I.A.WILSON JRNL TITL LIPID INTERACTIONS AND ANGLE OF APPROACH TO THE HIV-1 VIRAL JRNL TITL 2 MEMBRANE OF BROADLY NEUTRALIZING ANTIBODY 10E8: INSIGHTS FOR JRNL TITL 3 VACCINE AND THERAPEUTIC DESIGN. JRNL REF PLOS PATHOG. V. 13 06212 2017 JRNL REFN ESSN 1553-7374 JRNL PMID 28225819 JRNL DOI 10.1371/JOURNAL.PPAT.1006212 REMARK 2 REMARK 2 RESOLUTION. 2.62 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.62 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.97 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 3 NUMBER OF REFLECTIONS : 21841 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1091 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.9755 - 5.2453 0.95 2723 144 0.1662 0.2002 REMARK 3 2 5.2453 - 4.1642 0.98 2662 139 0.1445 0.1962 REMARK 3 3 4.1642 - 3.6380 0.96 2608 138 0.1783 0.2802 REMARK 3 4 3.6380 - 3.3055 0.98 2642 138 0.2078 0.2673 REMARK 3 5 3.3055 - 3.0686 0.98 2607 136 0.2254 0.2904 REMARK 3 6 3.0686 - 2.8877 0.98 2609 138 0.2594 0.3378 REMARK 3 7 2.8877 - 2.7431 0.99 2610 138 0.2712 0.3515 REMARK 3 8 2.7431 - 2.6237 0.86 2289 120 0.3064 0.4036 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.950 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 75.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 4702 REMARK 3 ANGLE : 1.087 6417 REMARK 3 CHIRALITY : 0.043 710 REMARK 3 PLANARITY : 0.006 834 REMARK 3 DIHEDRAL : 14.327 1673 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'H' AND ((RESSEQ 114:214)) REMARK 3 ORIGIN FOR THE GROUP (A): 5.8298 1.2030 49.8686 REMARK 3 T TENSOR REMARK 3 T11: 0.7486 T22: 0.6398 REMARK 3 T33: 0.8300 T12: 0.0437 REMARK 3 T13: 0.0721 T23: -0.0025 REMARK 3 L TENSOR REMARK 3 L11: 1.3759 L22: 5.1490 REMARK 3 L33: 3.3039 L12: -0.0955 REMARK 3 L13: -0.5709 L23: -0.4596 REMARK 3 S TENSOR REMARK 3 S11: 0.2599 S12: -0.0780 S13: 0.1464 REMARK 3 S21: 0.0706 S22: -0.1231 S23: -0.5885 REMARK 3 S31: -0.1091 S32: 0.2264 S33: -0.1778 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'G' REMARK 3 ORIGIN FOR THE GROUP (A): 50.8484 1.8236 0.5224 REMARK 3 T TENSOR REMARK 3 T11: 0.6850 T22: 0.7274 REMARK 3 T33: 0.7472 T12: 0.0632 REMARK 3 T13: -0.0269 T23: 0.0395 REMARK 3 L TENSOR REMARK 3 L11: 5.1069 L22: 4.4893 REMARK 3 L33: 3.7108 L12: 1.9805 REMARK 3 L13: -0.0658 L23: 1.0091 REMARK 3 S TENSOR REMARK 3 S11: 0.3816 S12: 0.0152 S13: 0.6186 REMARK 3 S21: 0.1618 S22: -0.2093 S23: -0.0518 REMARK 3 S31: -0.0276 S32: 0.1275 S33: -0.1324 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'H' AND ((RESSEQ 1:113)) REMARK 3 ORIGIN FOR THE GROUP (A): 24.0293 8.7490 21.6699 REMARK 3 T TENSOR REMARK 3 T11: 0.6746 T22: 0.6595 REMARK 3 T33: 0.7226 T12: -0.0511 REMARK 3 T13: 0.0465 T23: -0.1034 REMARK 3 L TENSOR REMARK 3 L11: 2.9785 L22: 3.6365 REMARK 3 L33: 3.1282 L12: -1.4880 REMARK 3 L13: -2.7278 L23: 0.3493 REMARK 3 S TENSOR REMARK 3 S11: 0.0744 S12: -0.0397 S13: 0.3143 REMARK 3 S21: 0.1240 S22: 0.2460 S23: -0.1448 REMARK 3 S31: -0.4318 S32: 0.1214 S33: -0.2533 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'L' AND ((RESSEQ 1:107)) REMARK 3 ORIGIN FOR THE GROUP (A): 20.3648 -10.2716 16.3839 REMARK 3 T TENSOR REMARK 3 T11: 0.7024 T22: 0.7323 REMARK 3 T33: 0.6426 T12: 0.0158 REMARK 3 T13: 0.0496 T23: -0.0069 REMARK 3 L TENSOR REMARK 3 L11: 3.5055 L22: 4.4786 REMARK 3 L33: 3.3429 L12: -1.0207 REMARK 3 L13: -0.9297 L23: 0.1157 REMARK 3 S TENSOR REMARK 3 S11: -0.1666 S12: 0.1112 S13: -0.0587 REMARK 3 S21: 0.3201 S22: 0.1916 S23: -0.0237 REMARK 3 S31: 0.1099 S32: -0.3016 S33: -0.0208 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'L' AND ((RESSEQ 108:220)) REMARK 3 ORIGIN FOR THE GROUP (A): -5.3055 -9.1401 43.9416 REMARK 3 T TENSOR REMARK 3 T11: 0.8234 T22: 0.6199 REMARK 3 T33: 0.7225 T12: -0.0056 REMARK 3 T13: 0.0992 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 1.9017 L22: 5.0195 REMARK 3 L33: 3.1591 L12: -0.6128 REMARK 3 L13: -0.5277 L23: 0.7152 REMARK 3 S TENSOR REMARK 3 S11: 0.0041 S12: -0.0759 S13: 0.1263 REMARK 3 S21: -0.6101 S22: 0.0469 S23: 0.2959 REMARK 3 S31: -0.1366 S32: -0.0027 S33: -0.0009 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5T80 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1000223834. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97950 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 2.3.7 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 2.3.7 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21918 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.624 REMARK 200 RESOLUTION RANGE LOW (A) : 46.968 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07500 REMARK 200 FOR THE DATA SET : 9.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.62 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.66600 REMARK 200 R SYM FOR SHELL (I) : 0.66600 REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.3.0 REMARK 200 STARTING MODEL: 4G6F, 3LF6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50% PEG 400, 0.2M NACL, 0.1 M CHES PH REMARK 280 9.5, VAPOR DIFFUSION, TEMPERATURE 295.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.61050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 98.42150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.63100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 98.42150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.61050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.63100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER H 215 REMARK 465 CYS H 216 REMARK 465 ASP H 217 REMARK 465 LYS H 218 REMARK 465 SER L 1 REMARK 465 CYS L 212 REMARK 465 SER L 213 REMARK 465 ASN G 7 REMARK 465 ALA G 8 REMARK 465 MET G 9 REMARK 465 SER G 160 REMARK 465 GLU G 161 REMARK 465 LEU G 162 REMARK 465 GLU G 163 REMARK 465 HIS G 164 REMARK 465 HIS G 165 REMARK 465 HIS G 166 REMARK 465 HIS G 167 REMARK 465 HIS G 168 REMARK 465 HIS G 169 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS L 93 CE NZ REMARK 470 LYS L 130 CD CE NZ REMARK 470 LYS L 150 CD CE NZ REMARK 470 LYS L 157 CD CE NZ REMARK 470 GLU L 184 CG CD OE1 OE2 REMARK 470 LYS L 187 CD CE NZ REMARK 470 ARG L 190 CG CD NE CZ NH1 NH2 REMARK 470 LYS G 24 CD CE NZ REMARK 470 GLU G 25 CG CD OE1 OE2 REMARK 470 GLU G 93 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO H 62 5.13 -69.52 REMARK 500 PRO H 100G 47.16 -96.62 REMARK 500 ASP H 144 64.48 61.87 REMARK 500 THR H 191 -69.38 -136.25 REMARK 500 ASN L 52 42.75 -160.40 REMARK 500 ALA L 84 -167.82 -167.65 REMARK 500 SER L 108 -138.70 65.54 REMARK 500 GLN L 109 124.67 57.72 REMARK 500 LYS L 111 135.53 -33.28 REMARK 500 ASP L 152 -98.74 54.05 REMARK 500 PRO L 209 93.93 -62.50 REMARK 500 THR L 210 97.16 -177.87 REMARK 500 ALA G 116 74.11 -115.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 44E L 301 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 44E L 301 DBREF 5T80 H 1 218 PDB 5T80 5T80 1 218 DBREF 5T80 L 1 213 PDB 5T80 5T80 1 213 DBREF 5T80 G 7 169 PDB 5T80 5T80 7 169 SEQRES 1 H 236 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL LYS SEQRES 2 H 236 PRO GLY GLY SER LEU ARG LEU SER CYS SER ALA SER GLY SEQRES 3 H 236 PHE ASP PHE ASP ASN ALA TRP MET THR TRP VAL ARG GLN SEQRES 4 H 236 PRO PRO GLY LYS GLY LEU GLU TRP VAL GLY ARG ILE THR SEQRES 5 H 236 GLY PRO GLY GLU GLY TRP SER VAL ASP TYR ALA ALA PRO SEQRES 6 H 236 VAL GLU GLY ARG PHE THR ILE SER ARG LEU ASN SER ILE SEQRES 7 H 236 ASN PHE LEU TYR LEU GLU MET ASN ASN LEU ARG MET GLU SEQRES 8 H 236 ASP SER GLY LEU TYR PHE CYS ALA ARG THR GLY LYS TYR SEQRES 9 H 236 TYR ASP PHE TRP SER GLY TYR PRO PRO GLY GLU GLU TYR SEQRES 10 H 236 PHE GLN ASP TRP GLY ARG GLY THR LEU VAL THR VAL SER SEQRES 11 H 236 SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA SEQRES 12 H 236 PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU SEQRES 13 H 236 GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR SEQRES 14 H 236 VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS SEQRES 15 H 236 THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER SEQRES 16 H 236 LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY SEQRES 17 H 236 THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER SEQRES 18 H 236 ASN THR LYS VAL ASP LYS ARG VAL GLU PRO LYS SER CYS SEQRES 19 H 236 ASP LYS SEQRES 1 L 215 SER TYR GLU LEU THR GLN GLU THR GLY VAL SER VAL ALA SEQRES 2 L 215 LEU GLY ARG THR VAL THR ILE THR CYS ARG GLY ASP SER SEQRES 3 L 215 LEU ARG SER HIS TYR ALA SER TRP TYR GLN LYS LYS PRO SEQRES 4 L 215 GLY GLN ALA PRO ILE LEU LEU PHE TYR GLY LYS ASN ASN SEQRES 5 L 215 ARG PRO SER GLY VAL PRO ASP ARG PHE SER GLY SER ALA SEQRES 6 L 215 SER GLY ASN ARG ALA SER LEU THR ILE SER GLY ALA GLN SEQRES 7 L 215 ALA GLU ASP ASP ALA GLU TYR TYR CYS SER SER ARG ASP SEQRES 8 L 215 LYS SER GLY SER ARG LEU SER VAL PHE GLY GLY GLY THR SEQRES 9 L 215 LYS LEU THR VAL LEU SER GLN PRO LYS ALA ALA PRO SER SEQRES 10 L 215 VAL THR LEU PHE PRO PRO SER SER GLU GLU LEU GLN ALA SEQRES 11 L 215 ASN LYS ALA THR LEU VAL CYS LEU ILE SER ASP PHE TYR SEQRES 12 L 215 PRO GLY ALA VAL THR VAL ALA TRP LYS ALA ASP SER SER SEQRES 13 L 215 PRO VAL LYS ALA GLY VAL GLU THR THR THR PRO SER LYS SEQRES 14 L 215 GLN SER ASN ASN LYS TYR ALA ALA SER SER TYR LEU SER SEQRES 15 L 215 LEU THR PRO GLU GLN TRP LYS SER HIS ARG SER TYR SER SEQRES 16 L 215 CYS GLN VAL THR HIS GLU GLY SER THR VAL GLU LYS THR SEQRES 17 L 215 VAL ALA PRO THR GLU CYS SER SEQRES 1 G 163 ASN ALA MET GLN GLY ILE HIS PHE ARG ARG HIS TYR VAL SEQRES 2 G 163 ARG HIS LEU PRO LYS GLU VAL SER GLN ASN ASP ILE ILE SEQRES 3 G 163 LYS ALA LEU ALA SER PRO LEU ILE ASN ASP GLY MET VAL SEQRES 4 G 163 VAL SER ASP PHE ALA ASP HIS VAL ILE THR ARG GLU GLN SEQRES 5 G 163 ASN PHE PRO THR GLY LEU PRO VAL GLU PRO VAL GLY VAL SEQRES 6 G 163 ALA ILE PRO HIS THR ASP SER LYS TYR VAL ARG GLN ASN SEQRES 7 G 163 ALA ILE SER VAL GLY ILE LEU ALA GLU PRO VAL ASN PHE SEQRES 8 G 163 GLU ASP ALA GLY GLY GLU PRO ASP PRO VAL PRO VAL ARG SEQRES 9 G 163 VAL VAL PHE MET LEU ALA LEU GLY ASN TRP PHE ASP ILE SEQRES 10 G 163 THR ASN VAL LEU TRP TRP ILE LYS ALA VAL ILE GLN ASP SEQRES 11 G 163 GLU ASP PHE MET GLN GLN LEU LEU VAL MET ASN ASP ASP SEQRES 12 G 163 GLU ILE TYR GLN SER ILE TYR THR ARG ILE SER GLU LEU SEQRES 13 G 163 GLU HIS HIS HIS HIS HIS HIS HET 44E L 301 11 HETNAM 44E (2R)-3-(PHOSPHONOOXY)PROPANE-1,2-DIYL DIHEXANOATE FORMUL 4 44E C15 H29 O8 P FORMUL 5 HOH *59(H2 O) HELIX 1 AA1 ARG H 83 SER H 87 5 5 HELIX 2 AA2 SER H 156 ALA H 158 5 3 HELIX 3 AA3 SER H 187 THR H 191 5 5 HELIX 4 AA4 LYS H 201 ASN H 204 5 4 HELIX 5 AA5 ASP L 26 SER L 30 5 5 HELIX 6 AA6 SER L 122 GLN L 127 1 6 HELIX 7 AA7 THR L 182 SER L 188 1 7 HELIX 8 AA8 ARG G 15 HIS G 17 5 3 HELIX 9 AA9 SER G 27 ASP G 42 1 16 HELIX 10 AB1 ASP G 48 PHE G 60 1 13 HELIX 11 AB2 ASP G 77 VAL G 81 5 5 HELIX 12 AB3 ASN G 119 ILE G 134 1 16 HELIX 13 AB4 ASP G 136 MET G 146 1 11 HELIX 14 AB5 ASN G 147 THR G 157 1 11 SHEET 1 AA1 4 GLN H 3 SER H 7 0 SHEET 2 AA1 4 LEU H 18 SER H 25 -1 O SER H 21 N SER H 7 SHEET 3 AA1 4 PHE H 77 MET H 82 -1 O MET H 82 N LEU H 18 SHEET 4 AA1 4 PHE H 67 LEU H 72 -1 N THR H 68 O GLU H 81 SHEET 1 AA2 6 LEU H 11 VAL H 12 0 SHEET 2 AA2 6 THR H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 AA2 6 GLY H 88 TYR H 98 -1 N TYR H 90 O THR H 107 SHEET 4 AA2 6 TRP H 33 GLN H 39 -1 N VAL H 37 O PHE H 91 SHEET 5 AA2 6 GLU H 46 ILE H 51 -1 O GLY H 49 N TRP H 36 SHEET 6 AA2 6 VAL H 57 TYR H 59 -1 O ASP H 58 N ARG H 50 SHEET 1 AA3 4 LEU H 11 VAL H 12 0 SHEET 2 AA3 4 THR H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 AA3 4 GLY H 88 TYR H 98 -1 N TYR H 90 O THR H 107 SHEET 4 AA3 4 GLU H 100I TRP H 103 -1 O TYR H 100K N GLY H 96 SHEET 1 AA4 4 SER H 120 SER H 127 0 SHEET 2 AA4 4 THR H 135 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AA4 4 TYR H 176 PRO H 185 -1 O SER H 180 N CYS H 140 SHEET 4 AA4 4 VAL H 163 THR H 165 -1 N HIS H 164 O VAL H 181 SHEET 1 AA5 4 SER H 120 SER H 127 0 SHEET 2 AA5 4 THR H 135 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AA5 4 TYR H 176 PRO H 185 -1 O SER H 180 N CYS H 140 SHEET 4 AA5 4 VAL H 169 LEU H 170 -1 N VAL H 169 O SER H 177 SHEET 1 AA6 3 THR H 151 TRP H 154 0 SHEET 2 AA6 3 TYR H 194 HIS H 200 -1 O ASN H 197 N SER H 153 SHEET 3 AA6 3 THR H 205 VAL H 211 -1 O VAL H 211 N TYR H 194 SHEET 1 AA7 4 THR L 5 GLN L 6 0 SHEET 2 AA7 4 VAL L 19 ARG L 24 -1 O ARG L 24 N THR L 5 SHEET 3 AA7 4 ARG L 70 ILE L 75 -1 O ALA L 71 N CYS L 23 SHEET 4 AA7 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AA8 5 GLY L 9 ALA L 14 0 SHEET 2 AA8 5 THR L 102 LEU L 107 1 O LEU L 107 N VAL L 13 SHEET 3 AA8 5 ALA L 84 ARG L 91 -1 N TYR L 86 O THR L 102 SHEET 4 AA8 5 SER L 34 LYS L 38 -1 N LYS L 38 O GLU L 85 SHEET 5 AA8 5 ILE L 45 PHE L 48 -1 O LEU L 47 N TRP L 35 SHEET 1 AA9 4 GLY L 9 ALA L 14 0 SHEET 2 AA9 4 THR L 102 LEU L 107 1 O LEU L 107 N VAL L 13 SHEET 3 AA9 4 ALA L 84 ARG L 91 -1 N TYR L 86 O THR L 102 SHEET 4 AA9 4 SER L 96 PHE L 98 -1 O VAL L 97 N SER L 90 SHEET 1 AB1 4 SER L 115 PHE L 119 0 SHEET 2 AB1 4 ALA L 131 PHE L 140 -1 O VAL L 134 N PHE L 119 SHEET 3 AB1 4 TYR L 173 LEU L 181 -1 O LEU L 181 N ALA L 131 SHEET 4 AB1 4 VAL L 160 THR L 162 -1 N GLU L 161 O TYR L 178 SHEET 1 AB2 4 SER L 115 PHE L 119 0 SHEET 2 AB2 4 ALA L 131 PHE L 140 -1 O VAL L 134 N PHE L 119 SHEET 3 AB2 4 TYR L 173 LEU L 181 -1 O LEU L 181 N ALA L 131 SHEET 4 AB2 4 SER L 166 LYS L 167 -1 N SER L 166 O ALA L 174 SHEET 1 AB3 4 SER L 154 VAL L 156 0 SHEET 2 AB3 4 THR L 146 ALA L 151 -1 N ALA L 151 O SER L 154 SHEET 3 AB3 4 TYR L 192 HIS L 198 -1 O GLN L 195 N ALA L 148 SHEET 4 AB3 4 SER L 201 VAL L 207 -1 O SER L 201 N HIS L 198 SHEET 1 AB4 5 VAL G 19 LEU G 22 0 SHEET 2 AB4 5 ALA G 85 PHE G 97 1 O ILE G 90 N LEU G 22 SHEET 3 AB4 5 VAL G 107 ALA G 116 -1 O VAL G 112 N GLY G 89 SHEET 4 AB4 5 GLY G 70 ALA G 72 1 N GLY G 70 O ARG G 110 SHEET 5 AB4 5 GLY G 63 LEU G 64 -1 N LEU G 64 O VAL G 71 SSBOND 1 CYS H 22 CYS H 92 1555 1555 2.04 SSBOND 2 CYS H 140 CYS H 196 1555 1555 2.03 SSBOND 3 CYS L 23 CYS L 88 1555 1555 2.03 SSBOND 4 CYS L 135 CYS L 194 1555 1555 2.03 CISPEP 1 PRO H 100F PRO H 100G 0 4.21 CISPEP 2 PHE H 146 PRO H 147 0 -5.17 CISPEP 3 GLU H 148 PRO H 149 0 1.16 CISPEP 4 PRO H 213 LYS H 214 0 1.59 CISPEP 5 TYR L 141 PRO L 142 0 4.68 CISPEP 6 GLU G 67 PRO G 68 0 -2.10 SITE 1 AC1 2 ASP G 105 ARG L 29 CRYST1 55.221 67.262 196.843 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018109 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014867 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005080 0.00000