data_5T86 # _entry.id 5T86 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.320 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5T86 WWPDB D_1000221876 # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type TargetTrack . MCSG-APC111439 unspecified TargetTrack . MCSG-APC111453 unspecified PDB . 5T87 unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5T86 _pdbx_database_status.recvd_initial_deposition_date 2016-09-06 _pdbx_database_status.SG_entry Y _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Michalska, K.' 1 'Stols, L.' 2 'Jedrzejczak, R.' 3 'Hayes, C.S.' 4 'Goulding, C.W.' 5 'Joachimiak, A.' 6 'Structure-Function Analysis of Polymorphic CDI Toxin-Immunity Protein Complexes (UC4CDI)' 7 'Midwest Center for Structural Genomics (MCSG)' 8 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Crystal structure of CDI complex from E. coli A0 34/86' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Michalska, K.' 1 ? primary 'Stols, L.' 2 ? primary 'Jedrzejczak, R.' 3 ? primary 'Hayes, C.S.' 4 ? primary 'Goulding, C.W.' 5 ? primary 'Joachimiak, A.' 6 ? primary 'Structure-Function Analysis of Polymorphic CDI Toxin-Immunity Protein Complexes (UC4CDI)' 7 ? primary 'Midwest Center for Structural Genomics (MCSG)' 8 ? # _cell.entry_id 5T86 _cell.length_a 57.934 _cell.length_b 59.652 _cell.length_c 71.074 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5T86 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CdiA toxin' 11733.242 1 ? ? 'catalytic domain' ;The cloned fragment starts with V3033 of the original sequence. The purified complex was trypsin-treated and the sequence of most likely cleavage product is provided. ; 2 polymer man 'CdiI immunity protein' 15051.525 1 ? ? ? ? 3 non-polymer syn 'ACETATE ION' 59.044 5 ? ? ? ? 4 water nat water 18.015 106 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;IEQILKPEKNWETARNKALDLVGNLGADSKPVIGRLEVSAGNGKVIGRQSSDGKVGWRVDYDPEKGTHINIWDYSQGKGP GKAVKQVIPFEGNEKSFETILKQLNR ; ;IEQILKPEKNWETARNKALDLVGNLGADSKPVIGRLEVSAGNGKVIGRQSSDGKVGWRVDYDPEKGTHINIWDYSQGKGP GKAVKQVIPFEGNEKSFETILKQLNR ; A MCSG-APC111453 2 'polypeptide(L)' no yes ;(MSE)TLFDECREALSADFNIVEGLAQQEALGILNKYPLAKGSVTWSEIRHSDYESFDELLSANSVKNDD(MSE)FVFAD DASIPVFRSNLRLIAENIYDVTALSPKLFIFNDEVIIQPLFPTD(MSE)FRLGIKKHHHHHH ; ;MTLFDECREALSADFNIVEGLAQQEALGILNKYPLAKGSVTWSEIRHSDYESFDELLSANSVKNDDMFVFADDASIPVFR SNLRLIAENIYDVTALSPKLFIFNDEVIIQPLFPTDMFRLGIKKHHHHHH ; I MCSG-APC111439 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 GLU n 1 3 GLN n 1 4 ILE n 1 5 LEU n 1 6 LYS n 1 7 PRO n 1 8 GLU n 1 9 LYS n 1 10 ASN n 1 11 TRP n 1 12 GLU n 1 13 THR n 1 14 ALA n 1 15 ARG n 1 16 ASN n 1 17 LYS n 1 18 ALA n 1 19 LEU n 1 20 ASP n 1 21 LEU n 1 22 VAL n 1 23 GLY n 1 24 ASN n 1 25 LEU n 1 26 GLY n 1 27 ALA n 1 28 ASP n 1 29 SER n 1 30 LYS n 1 31 PRO n 1 32 VAL n 1 33 ILE n 1 34 GLY n 1 35 ARG n 1 36 LEU n 1 37 GLU n 1 38 VAL n 1 39 SER n 1 40 ALA n 1 41 GLY n 1 42 ASN n 1 43 GLY n 1 44 LYS n 1 45 VAL n 1 46 ILE n 1 47 GLY n 1 48 ARG n 1 49 GLN n 1 50 SER n 1 51 SER n 1 52 ASP n 1 53 GLY n 1 54 LYS n 1 55 VAL n 1 56 GLY n 1 57 TRP n 1 58 ARG n 1 59 VAL n 1 60 ASP n 1 61 TYR n 1 62 ASP n 1 63 PRO n 1 64 GLU n 1 65 LYS n 1 66 GLY n 1 67 THR n 1 68 HIS n 1 69 ILE n 1 70 ASN n 1 71 ILE n 1 72 TRP n 1 73 ASP n 1 74 TYR n 1 75 SER n 1 76 GLN n 1 77 GLY n 1 78 LYS n 1 79 GLY n 1 80 PRO n 1 81 GLY n 1 82 LYS n 1 83 ALA n 1 84 VAL n 1 85 LYS n 1 86 GLN n 1 87 VAL n 1 88 ILE n 1 89 PRO n 1 90 PHE n 1 91 GLU n 1 92 GLY n 1 93 ASN n 1 94 GLU n 1 95 LYS n 1 96 SER n 1 97 PHE n 1 98 GLU n 1 99 THR n 1 100 ILE n 1 101 LEU n 1 102 LYS n 1 103 GLN n 1 104 LEU n 1 105 ASN n 1 106 ARG n 2 1 MSE n 2 2 THR n 2 3 LEU n 2 4 PHE n 2 5 ASP n 2 6 GLU n 2 7 CYS n 2 8 ARG n 2 9 GLU n 2 10 ALA n 2 11 LEU n 2 12 SER n 2 13 ALA n 2 14 ASP n 2 15 PHE n 2 16 ASN n 2 17 ILE n 2 18 VAL n 2 19 GLU n 2 20 GLY n 2 21 LEU n 2 22 ALA n 2 23 GLN n 2 24 GLN n 2 25 GLU n 2 26 ALA n 2 27 LEU n 2 28 GLY n 2 29 ILE n 2 30 LEU n 2 31 ASN n 2 32 LYS n 2 33 TYR n 2 34 PRO n 2 35 LEU n 2 36 ALA n 2 37 LYS n 2 38 GLY n 2 39 SER n 2 40 VAL n 2 41 THR n 2 42 TRP n 2 43 SER n 2 44 GLU n 2 45 ILE n 2 46 ARG n 2 47 HIS n 2 48 SER n 2 49 ASP n 2 50 TYR n 2 51 GLU n 2 52 SER n 2 53 PHE n 2 54 ASP n 2 55 GLU n 2 56 LEU n 2 57 LEU n 2 58 SER n 2 59 ALA n 2 60 ASN n 2 61 SER n 2 62 VAL n 2 63 LYS n 2 64 ASN n 2 65 ASP n 2 66 ASP n 2 67 MSE n 2 68 PHE n 2 69 VAL n 2 70 PHE n 2 71 ALA n 2 72 ASP n 2 73 ASP n 2 74 ALA n 2 75 SER n 2 76 ILE n 2 77 PRO n 2 78 VAL n 2 79 PHE n 2 80 ARG n 2 81 SER n 2 82 ASN n 2 83 LEU n 2 84 ARG n 2 85 LEU n 2 86 ILE n 2 87 ALA n 2 88 GLU n 2 89 ASN n 2 90 ILE n 2 91 TYR n 2 92 ASP n 2 93 VAL n 2 94 THR n 2 95 ALA n 2 96 LEU n 2 97 SER n 2 98 PRO n 2 99 LYS n 2 100 LEU n 2 101 PHE n 2 102 ILE n 2 103 PHE n 2 104 ASN n 2 105 ASP n 2 106 GLU n 2 107 VAL n 2 108 ILE n 2 109 ILE n 2 110 GLN n 2 111 PRO n 2 112 LEU n 2 113 PHE n 2 114 PRO n 2 115 THR n 2 116 ASP n 2 117 MSE n 2 118 PHE n 2 119 ARG n 2 120 LEU n 2 121 GLY n 2 122 ILE n 2 123 LYS n 2 124 LYS n 2 125 HIS n 2 126 HIS n 2 127 HIS n 2 128 HIS n 2 129 HIS n 2 130 HIS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 106 ? ? eco1013 ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? 'Escherichia coli' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? pMCSG81 ? ? 2 1 sample 'Biological sequence' 1 130 ? ? AGA26_04870 ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? 'Escherichia coli' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? pMCSG81 ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP Q1RPM1_ECOLX Q1RPM1 ? 1 ;IEQILKPEKNWETARNKALDLVGNLGADSKPVIGRLEVSAGNGKVIGRQSSDGKVGWRVDYDPEKGTHINIWDYSQGKGP GKAVKQVIPFEGNEKSFETILKQLNR ; 3182 2 UNP A0A0B0W5A7_ECOLX A0A0B0W5A7 ? 2 ;MTLFDECREALSADFNIVEGLAQQEALGILNKYPLAKGSVTWSEIWHSDYESFDELLCANSVKNDDMFVFADDASIPVFR SNLRLIAENIYDVTALSPKLFIFNDEVIIQPLFPTDMFRLGIKK ; 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5T86 A 1 ? 106 ? Q1RPM1 3182 ? 3287 ? 150 255 2 2 5T86 I 1 ? 124 ? A0A0B0W5A7 1 ? 124 ? 1 124 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 2 5T86 ARG I 46 ? UNP A0A0B0W5A7 TRP 46 'SEE REMARK 999' 46 1 2 5T86 SER I 58 ? UNP A0A0B0W5A7 CYS 58 'SEE REMARK 999' 58 2 2 5T86 HIS I 125 ? UNP A0A0B0W5A7 ? ? 'expression tag' 125 3 2 5T86 HIS I 126 ? UNP A0A0B0W5A7 ? ? 'expression tag' 126 4 2 5T86 HIS I 127 ? UNP A0A0B0W5A7 ? ? 'expression tag' 127 5 2 5T86 HIS I 128 ? UNP A0A0B0W5A7 ? ? 'expression tag' 128 6 2 5T86 HIS I 129 ? UNP A0A0B0W5A7 ? ? 'expression tag' 129 7 2 5T86 HIS I 130 ? UNP A0A0B0W5A7 ? ? 'expression tag' 130 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5T86 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.30 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 46.63 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '2% tacsimate pH 4.0, 0.1 M Na acetate, 16% PEG3350, cryo 19% glycerol' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details mirrors _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-08-23 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'SI (111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9793 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9793 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5T86 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.0 _reflns.d_resolution_low 30.0 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 17148 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3 _reflns.percent_possible_obs 99.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.0 _reflns.pdbx_Rmerge_I_obs 0.104 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16.17 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.03 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.94 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 99.5 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.743 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 5.1 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5T86 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 15909 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.00 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 97.43 _refine.ls_R_factor_obs 0.18507 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18278 _refine.ls_R_factor_R_free 0.23396 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 799 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.956 _refine.correlation_coeff_Fo_to_Fc_free 0.917 _refine.B_iso_mean 29.680 _refine.aniso_B[1][1] -0.63 _refine.aniso_B[2][2] -0.17 _refine.aniso_B[3][3] 0.80 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.183 _refine.pdbx_overall_ESU_R_Free 0.168 _refine.overall_SU_ML 0.119 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 8.826 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 1794 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 20 _refine_hist.number_atoms_solvent 106 _refine_hist.number_atoms_total 1920 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 30.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.019 ? 1856 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 1789 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.562 1.969 ? 2501 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.943 3.000 ? 4118 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.544 5.000 ? 226 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 32.786 24.944 ? 89 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.760 15.000 ? 322 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.531 15.000 ? 11 'X-RAY DIFFRACTION' ? r_chiral_restr 0.093 0.200 ? 271 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.021 ? 2111 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 416 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.681 1.690 ? 915 'X-RAY DIFFRACTION' ? r_mcbond_other 0.659 1.670 ? 909 'X-RAY DIFFRACTION' ? r_mcangle_it 1.064 2.502 ? 1134 'X-RAY DIFFRACTION' ? r_mcangle_other 1.063 2.503 ? 1135 'X-RAY DIFFRACTION' ? r_scbond_it 1.131 1.827 ? 941 'X-RAY DIFFRACTION' ? r_scbond_other 1.131 1.830 ? 942 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other 1.695 2.691 ? 1368 'X-RAY DIFFRACTION' ? r_long_range_B_refined 3.861 20.113 ? 2064 'X-RAY DIFFRACTION' ? r_long_range_B_other 3.860 20.122 ? 2065 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 2.003 _refine_ls_shell.d_res_low 2.111 _refine_ls_shell.number_reflns_R_work 1969 _refine_ls_shell.R_factor_R_work 0.236 _refine_ls_shell.percent_reflns_obs 84.64 _refine_ls_shell.R_factor_R_free 0.268 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 103 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 5T86 _struct.title 'Crystal structure of CDI complex from E. coli A0 34/86' _struct.pdbx_descriptor 'CdiA toxin, Uncharacterized protein' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5T86 _struct_keywords.text ;Contact-dependent growth inhibition, toxin, antitoxin, immunity protein, Structural Genomics, PSI-Biology, Midwest Center for Structural Genomics, MCSG, Structure-Function Analysis of Polymorphic CDI Toxin-Immunity Protein Complexes, UC4CDI ; _struct_keywords.pdbx_keywords TOXIN # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 4 ? I N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 10 ? GLY A 23 ? ASN A 159 GLY A 172 1 ? 14 HELX_P HELX_P2 AA2 ASN A 93 ? ASN A 105 ? ASN A 242 ASN A 254 1 ? 13 HELX_P HELX_P3 AA3 LEU B 3 ? LEU B 11 ? LEU I 3 LEU I 11 1 ? 9 HELX_P HELX_P4 AA4 SER B 12 ? PHE B 15 ? SER I 12 PHE I 15 5 ? 4 HELX_P HELX_P5 AA5 GLY B 20 ? LYS B 32 ? GLY I 20 LYS I 32 1 ? 13 HELX_P HELX_P6 AA6 TRP B 42 ? ILE B 45 ? TRP I 42 ILE I 45 5 ? 4 HELX_P HELX_P7 AA7 SER B 52 ? ASN B 60 ? SER I 52 ASN I 60 1 ? 9 HELX_P HELX_P8 AA8 LEU B 83 ? ASN B 89 ? LEU I 83 ASN I 89 1 ? 7 HELX_P HELX_P9 AA9 ASN B 89 ? ALA B 95 ? ASN I 89 ALA I 95 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? B ASP 66 C ? ? ? 1_555 B MSE 67 N ? ? I ASP 66 I MSE 67 1_555 ? ? ? ? ? ? ? 1.324 ? covale2 covale both ? B MSE 67 C ? ? ? 1_555 B PHE 68 N ? ? I MSE 67 I PHE 68 1_555 ? ? ? ? ? ? ? 1.343 ? covale3 covale both ? B ASP 116 C ? ? ? 1_555 B MSE 117 N ? ? I ASP 116 I MSE 117 1_555 ? ? ? ? ? ? ? 1.344 ? covale4 covale both ? B MSE 117 C ? ? ? 1_555 B PHE 118 N ? ? I MSE 117 I PHE 118 1_555 ? ? ? ? ? ? ? 1.324 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PHE _struct_mon_prot_cis.label_seq_id 113 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PHE _struct_mon_prot_cis.auth_seq_id 113 _struct_mon_prot_cis.auth_asym_id I _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 114 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 114 _struct_mon_prot_cis.pdbx_auth_asym_id_2 I _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 10.03 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 7 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS A 30 ? ILE A 33 ? LYS A 179 ILE A 182 AA1 2 VAL A 45 ? GLN A 49 ? VAL A 194 GLN A 198 AA1 3 VAL A 55 ? ASP A 62 ? VAL A 204 ASP A 211 AA1 4 GLY A 66 ? ASP A 73 ? GLY A 215 ASP A 222 AA1 5 VAL A 84 ? PRO A 89 ? VAL A 233 PRO A 238 AA2 1 ASN B 16 ? VAL B 18 ? ASN I 16 VAL I 18 AA2 2 VAL B 78 ? ASN B 82 ? VAL I 78 ASN I 82 AA2 3 ASP B 66 ? ALA B 71 ? ASP I 66 ALA I 71 AA2 4 LEU B 100 ? PHE B 103 ? LEU I 100 PHE I 103 AA2 5 VAL B 107 ? PRO B 111 ? VAL I 107 PRO I 111 AA2 6 PHE B 118 ? ILE B 122 ? PHE I 118 ILE I 122 AA2 7 HIS B 47 ? TYR B 50 ? HIS I 47 TYR I 50 AA3 1 LEU B 35 ? ALA B 36 ? LEU I 35 ALA I 36 AA3 2 SER B 39 ? VAL B 40 ? SER I 39 VAL I 40 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 32 ? N VAL A 181 O ILE A 46 ? O ILE A 195 AA1 2 3 N ILE A 46 ? N ILE A 195 O VAL A 59 ? O VAL A 208 AA1 3 4 N ASP A 62 ? N ASP A 211 O GLY A 66 ? O GLY A 215 AA1 4 5 N ILE A 71 ? N ILE A 220 O GLN A 86 ? O GLN A 235 AA2 1 2 N VAL B 18 ? N VAL I 18 O VAL B 78 ? O VAL I 78 AA2 2 3 O PHE B 79 ? O PHE I 79 N VAL B 69 ? N VAL I 69 AA2 3 4 N PHE B 68 ? N PHE I 68 O PHE B 103 ? O PHE I 103 AA2 4 5 N ILE B 102 ? N ILE I 102 O ILE B 109 ? O ILE I 109 AA2 5 6 N ILE B 108 ? N ILE I 108 O GLY B 121 ? O GLY I 121 AA2 6 7 O LEU B 120 ? O LEU I 120 N SER B 48 ? N SER I 48 AA3 1 2 N ALA B 36 ? N ALA I 36 O SER B 39 ? O SER I 39 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ACT 301 ? 6 'binding site for residue ACT A 301' AC2 Software A ACT 302 ? 2 'binding site for residue ACT A 302' AC3 Software A ACT 303 ? 3 'binding site for residue ACT A 303' AC4 Software A ACT 304 ? 4 'binding site for residue ACT A 304' AC5 Software I ACT 201 ? 2 'binding site for residue ACT I 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 LYS A 65 ? LYS A 214 . ? 1_555 ? 2 AC1 6 HIS A 68 ? HIS A 217 . ? 1_555 ? 3 AC1 6 ASN A 70 ? ASN A 219 . ? 1_555 ? 4 AC1 6 PRO B 98 ? PRO I 98 . ? 1_555 ? 5 AC1 6 LYS B 99 ? LYS I 99 . ? 1_555 ? 6 AC1 6 HOH I . ? HOH I 304 . ? 1_555 ? 7 AC2 2 GLU A 12 ? GLU A 161 . ? 1_555 ? 8 AC2 2 ALA A 27 ? ALA A 176 . ? 4_446 ? 9 AC3 3 LYS A 102 ? LYS A 251 . ? 1_555 ? 10 AC3 3 ASN A 105 ? ASN A 254 . ? 1_555 ? 11 AC3 3 GLU B 25 ? GLU I 25 . ? 3_646 ? 12 AC4 4 SER A 50 ? SER A 199 . ? 1_555 ? 13 AC4 4 ASP A 52 ? ASP A 201 . ? 1_555 ? 14 AC4 4 HOH H . ? HOH A 413 . ? 1_555 ? 15 AC4 4 LEU B 21 ? LEU I 21 . ? 2_654 ? 16 AC5 2 GLU A 37 ? GLU A 186 . ? 1_555 ? 17 AC5 2 ASN B 31 ? ASN I 31 . ? 1_555 ? # _atom_sites.entry_id 5T86 _atom_sites.fract_transf_matrix[1][1] 0.017261 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016764 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014070 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 150 ? ? ? A . n A 1 2 GLU 2 151 ? ? ? A . n A 1 3 GLN 3 152 152 GLN GLN A . n A 1 4 ILE 4 153 153 ILE ILE A . n A 1 5 LEU 5 154 154 LEU LEU A . n A 1 6 LYS 6 155 155 LYS LYS A . n A 1 7 PRO 7 156 156 PRO PRO A . n A 1 8 GLU 8 157 157 GLU GLU A . n A 1 9 LYS 9 158 158 LYS LYS A . n A 1 10 ASN 10 159 159 ASN ASN A . n A 1 11 TRP 11 160 160 TRP TRP A . n A 1 12 GLU 12 161 161 GLU GLU A . n A 1 13 THR 13 162 162 THR THR A . n A 1 14 ALA 14 163 163 ALA ALA A . n A 1 15 ARG 15 164 164 ARG ARG A . n A 1 16 ASN 16 165 165 ASN ASN A . n A 1 17 LYS 17 166 166 LYS LYS A . n A 1 18 ALA 18 167 167 ALA ALA A . n A 1 19 LEU 19 168 168 LEU LEU A . n A 1 20 ASP 20 169 169 ASP ASP A . n A 1 21 LEU 21 170 170 LEU LEU A . n A 1 22 VAL 22 171 171 VAL VAL A . n A 1 23 GLY 23 172 172 GLY GLY A . n A 1 24 ASN 24 173 173 ASN ASN A . n A 1 25 LEU 25 174 174 LEU LEU A . n A 1 26 GLY 26 175 175 GLY GLY A . n A 1 27 ALA 27 176 176 ALA ALA A . n A 1 28 ASP 28 177 177 ASP ASP A . n A 1 29 SER 29 178 178 SER SER A . n A 1 30 LYS 30 179 179 LYS LYS A . n A 1 31 PRO 31 180 180 PRO PRO A . n A 1 32 VAL 32 181 181 VAL VAL A . n A 1 33 ILE 33 182 182 ILE ILE A . n A 1 34 GLY 34 183 183 GLY GLY A . n A 1 35 ARG 35 184 184 ARG ARG A . n A 1 36 LEU 36 185 185 LEU LEU A . n A 1 37 GLU 37 186 186 GLU GLU A . n A 1 38 VAL 38 187 187 VAL VAL A . n A 1 39 SER 39 188 188 SER SER A . n A 1 40 ALA 40 189 189 ALA ALA A . n A 1 41 GLY 41 190 190 GLY GLY A . n A 1 42 ASN 42 191 191 ASN ASN A . n A 1 43 GLY 43 192 192 GLY GLY A . n A 1 44 LYS 44 193 193 LYS LYS A . n A 1 45 VAL 45 194 194 VAL VAL A . n A 1 46 ILE 46 195 195 ILE ILE A . n A 1 47 GLY 47 196 196 GLY GLY A . n A 1 48 ARG 48 197 197 ARG ARG A . n A 1 49 GLN 49 198 198 GLN GLN A . n A 1 50 SER 50 199 199 SER SER A . n A 1 51 SER 51 200 200 SER SER A . n A 1 52 ASP 52 201 201 ASP ASP A . n A 1 53 GLY 53 202 202 GLY GLY A . n A 1 54 LYS 54 203 203 LYS LYS A . n A 1 55 VAL 55 204 204 VAL VAL A . n A 1 56 GLY 56 205 205 GLY GLY A . n A 1 57 TRP 57 206 206 TRP TRP A . n A 1 58 ARG 58 207 207 ARG ARG A . n A 1 59 VAL 59 208 208 VAL VAL A . n A 1 60 ASP 60 209 209 ASP ASP A . n A 1 61 TYR 61 210 210 TYR TYR A . n A 1 62 ASP 62 211 211 ASP ASP A . n A 1 63 PRO 63 212 212 PRO PRO A . n A 1 64 GLU 64 213 213 GLU GLU A . n A 1 65 LYS 65 214 214 LYS LYS A . n A 1 66 GLY 66 215 215 GLY GLY A . n A 1 67 THR 67 216 216 THR THR A . n A 1 68 HIS 68 217 217 HIS HIS A . n A 1 69 ILE 69 218 218 ILE ILE A . n A 1 70 ASN 70 219 219 ASN ASN A . n A 1 71 ILE 71 220 220 ILE ILE A . n A 1 72 TRP 72 221 221 TRP TRP A . n A 1 73 ASP 73 222 222 ASP ASP A . n A 1 74 TYR 74 223 223 TYR TYR A . n A 1 75 SER 75 224 224 SER SER A . n A 1 76 GLN 76 225 225 GLN GLN A . n A 1 77 GLY 77 226 226 GLY GLY A . n A 1 78 LYS 78 227 227 LYS LYS A . n A 1 79 GLY 79 228 228 GLY GLY A . n A 1 80 PRO 80 229 229 PRO PRO A . n A 1 81 GLY 81 230 230 GLY GLY A . n A 1 82 LYS 82 231 231 LYS LYS A . n A 1 83 ALA 83 232 232 ALA ALA A . n A 1 84 VAL 84 233 233 VAL VAL A . n A 1 85 LYS 85 234 234 LYS LYS A . n A 1 86 GLN 86 235 235 GLN GLN A . n A 1 87 VAL 87 236 236 VAL VAL A . n A 1 88 ILE 88 237 237 ILE ILE A . n A 1 89 PRO 89 238 238 PRO PRO A . n A 1 90 PHE 90 239 239 PHE PHE A . n A 1 91 GLU 91 240 240 GLU GLU A . n A 1 92 GLY 92 241 241 GLY GLY A . n A 1 93 ASN 93 242 242 ASN ASN A . n A 1 94 GLU 94 243 243 GLU GLU A . n A 1 95 LYS 95 244 244 LYS LYS A . n A 1 96 SER 96 245 245 SER SER A . n A 1 97 PHE 97 246 246 PHE PHE A . n A 1 98 GLU 98 247 247 GLU GLU A . n A 1 99 THR 99 248 248 THR THR A . n A 1 100 ILE 100 249 249 ILE ILE A . n A 1 101 LEU 101 250 250 LEU LEU A . n A 1 102 LYS 102 251 251 LYS LYS A . n A 1 103 GLN 103 252 252 GLN GLN A . n A 1 104 LEU 104 253 253 LEU LEU A . n A 1 105 ASN 105 254 254 ASN ASN A . n A 1 106 ARG 106 255 255 ARG ARG A . n B 2 1 MSE 1 1 ? ? ? I . n B 2 2 THR 2 2 2 THR THR I . n B 2 3 LEU 3 3 3 LEU LEU I . n B 2 4 PHE 4 4 4 PHE PHE I . n B 2 5 ASP 5 5 5 ASP ASP I . n B 2 6 GLU 6 6 6 GLU GLU I . n B 2 7 CYS 7 7 7 CYS CYS I . n B 2 8 ARG 8 8 8 ARG ARG I . n B 2 9 GLU 9 9 9 GLU GLU I . n B 2 10 ALA 10 10 10 ALA ALA I . n B 2 11 LEU 11 11 11 LEU LEU I . n B 2 12 SER 12 12 12 SER SER I . n B 2 13 ALA 13 13 13 ALA ALA I . n B 2 14 ASP 14 14 14 ASP ASP I . n B 2 15 PHE 15 15 15 PHE PHE I . n B 2 16 ASN 16 16 16 ASN ASN I . n B 2 17 ILE 17 17 17 ILE ILE I . n B 2 18 VAL 18 18 18 VAL VAL I . n B 2 19 GLU 19 19 19 GLU GLU I . n B 2 20 GLY 20 20 20 GLY GLY I . n B 2 21 LEU 21 21 21 LEU LEU I . n B 2 22 ALA 22 22 22 ALA ALA I . n B 2 23 GLN 23 23 23 GLN GLN I . n B 2 24 GLN 24 24 24 GLN GLN I . n B 2 25 GLU 25 25 25 GLU GLU I . n B 2 26 ALA 26 26 26 ALA ALA I . n B 2 27 LEU 27 27 27 LEU LEU I . n B 2 28 GLY 28 28 28 GLY GLY I . n B 2 29 ILE 29 29 29 ILE ILE I . n B 2 30 LEU 30 30 30 LEU LEU I . n B 2 31 ASN 31 31 31 ASN ASN I . n B 2 32 LYS 32 32 32 LYS LYS I . n B 2 33 TYR 33 33 33 TYR TYR I . n B 2 34 PRO 34 34 34 PRO PRO I . n B 2 35 LEU 35 35 35 LEU LEU I . n B 2 36 ALA 36 36 36 ALA ALA I . n B 2 37 LYS 37 37 37 LYS LYS I . n B 2 38 GLY 38 38 38 GLY GLY I . n B 2 39 SER 39 39 39 SER SER I . n B 2 40 VAL 40 40 40 VAL VAL I . n B 2 41 THR 41 41 41 THR THR I . n B 2 42 TRP 42 42 42 TRP TRP I . n B 2 43 SER 43 43 43 SER SER I . n B 2 44 GLU 44 44 44 GLU GLU I . n B 2 45 ILE 45 45 45 ILE ILE I . n B 2 46 ARG 46 46 46 ARG ARG I . n B 2 47 HIS 47 47 47 HIS HIS I . n B 2 48 SER 48 48 48 SER SER I . n B 2 49 ASP 49 49 49 ASP ASP I . n B 2 50 TYR 50 50 50 TYR TYR I . n B 2 51 GLU 51 51 51 GLU GLU I . n B 2 52 SER 52 52 52 SER SER I . n B 2 53 PHE 53 53 53 PHE PHE I . n B 2 54 ASP 54 54 54 ASP ASP I . n B 2 55 GLU 55 55 55 GLU GLU I . n B 2 56 LEU 56 56 56 LEU LEU I . n B 2 57 LEU 57 57 57 LEU LEU I . n B 2 58 SER 58 58 58 SER SER I . n B 2 59 ALA 59 59 59 ALA ALA I . n B 2 60 ASN 60 60 60 ASN ASN I . n B 2 61 SER 61 61 61 SER SER I . n B 2 62 VAL 62 62 62 VAL VAL I . n B 2 63 LYS 63 63 63 LYS LYS I . n B 2 64 ASN 64 64 64 ASN ASN I . n B 2 65 ASP 65 65 65 ASP ASP I . n B 2 66 ASP 66 66 66 ASP ASP I . n B 2 67 MSE 67 67 67 MSE MSE I . n B 2 68 PHE 68 68 68 PHE PHE I . n B 2 69 VAL 69 69 69 VAL VAL I . n B 2 70 PHE 70 70 70 PHE PHE I . n B 2 71 ALA 71 71 71 ALA ALA I . n B 2 72 ASP 72 72 72 ASP ASP I . n B 2 73 ASP 73 73 73 ASP ASP I . n B 2 74 ALA 74 74 74 ALA ALA I . n B 2 75 SER 75 75 75 SER SER I . n B 2 76 ILE 76 76 76 ILE ILE I . n B 2 77 PRO 77 77 77 PRO PRO I . n B 2 78 VAL 78 78 78 VAL VAL I . n B 2 79 PHE 79 79 79 PHE PHE I . n B 2 80 ARG 80 80 80 ARG ARG I . n B 2 81 SER 81 81 81 SER SER I . n B 2 82 ASN 82 82 82 ASN ASN I . n B 2 83 LEU 83 83 83 LEU LEU I . n B 2 84 ARG 84 84 84 ARG ARG I . n B 2 85 LEU 85 85 85 LEU LEU I . n B 2 86 ILE 86 86 86 ILE ILE I . n B 2 87 ALA 87 87 87 ALA ALA I . n B 2 88 GLU 88 88 88 GLU GLU I . n B 2 89 ASN 89 89 89 ASN ASN I . n B 2 90 ILE 90 90 90 ILE ILE I . n B 2 91 TYR 91 91 91 TYR TYR I . n B 2 92 ASP 92 92 92 ASP ASP I . n B 2 93 VAL 93 93 93 VAL VAL I . n B 2 94 THR 94 94 94 THR THR I . n B 2 95 ALA 95 95 95 ALA ALA I . n B 2 96 LEU 96 96 96 LEU LEU I . n B 2 97 SER 97 97 97 SER SER I . n B 2 98 PRO 98 98 98 PRO PRO I . n B 2 99 LYS 99 99 99 LYS LYS I . n B 2 100 LEU 100 100 100 LEU LEU I . n B 2 101 PHE 101 101 101 PHE PHE I . n B 2 102 ILE 102 102 102 ILE ILE I . n B 2 103 PHE 103 103 103 PHE PHE I . n B 2 104 ASN 104 104 104 ASN ASN I . n B 2 105 ASP 105 105 105 ASP ASP I . n B 2 106 GLU 106 106 106 GLU GLU I . n B 2 107 VAL 107 107 107 VAL VAL I . n B 2 108 ILE 108 108 108 ILE ILE I . n B 2 109 ILE 109 109 109 ILE ILE I . n B 2 110 GLN 110 110 110 GLN GLN I . n B 2 111 PRO 111 111 111 PRO PRO I . n B 2 112 LEU 112 112 112 LEU LEU I . n B 2 113 PHE 113 113 113 PHE PHE I . n B 2 114 PRO 114 114 114 PRO PRO I . n B 2 115 THR 115 115 115 THR THR I . n B 2 116 ASP 116 116 116 ASP ASP I . n B 2 117 MSE 117 117 117 MSE MSE I . n B 2 118 PHE 118 118 118 PHE PHE I . n B 2 119 ARG 119 119 119 ARG ARG I . n B 2 120 LEU 120 120 120 LEU LEU I . n B 2 121 GLY 121 121 121 GLY GLY I . n B 2 122 ILE 122 122 122 ILE ILE I . n B 2 123 LYS 123 123 123 LYS LYS I . n B 2 124 LYS 124 124 124 LYS LYS I . n B 2 125 HIS 125 125 ? ? ? I . n B 2 126 HIS 126 126 ? ? ? I . n B 2 127 HIS 127 127 ? ? ? I . n B 2 128 HIS 128 128 ? ? ? I . n B 2 129 HIS 129 129 ? ? ? I . n B 2 130 HIS 130 130 ? ? ? I . n # loop_ _pdbx_SG_project.id _pdbx_SG_project.project_name _pdbx_SG_project.full_name_of_center _pdbx_SG_project.initial_of_center 1 PSI:Biology 'Midwest Center for Structural Genomics' MCSG 2 PSI:Biology 'Structure-Function Analysis of Polymorphic CDI Toxin-Immunity Protein Complexes' UC4CDI # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ACT 1 301 1 ACT ACT A . D 3 ACT 1 302 2 ACT ACT A . E 3 ACT 1 303 3 ACT ACT A . F 3 ACT 1 304 4 ACT ACT A . G 3 ACT 1 201 5 ACT ACT I . H 4 HOH 1 401 18 HOH HOH A . H 4 HOH 2 402 54 HOH HOH A . H 4 HOH 3 403 52 HOH HOH A . H 4 HOH 4 404 24 HOH HOH A . H 4 HOH 5 405 59 HOH HOH A . H 4 HOH 6 406 5 HOH HOH A . H 4 HOH 7 407 21 HOH HOH A . H 4 HOH 8 408 77 HOH HOH A . H 4 HOH 9 409 31 HOH HOH A . H 4 HOH 10 410 35 HOH HOH A . H 4 HOH 11 411 60 HOH HOH A . H 4 HOH 12 412 9 HOH HOH A . H 4 HOH 13 413 36 HOH HOH A . H 4 HOH 14 414 41 HOH HOH A . H 4 HOH 15 415 15 HOH HOH A . H 4 HOH 16 416 62 HOH HOH A . H 4 HOH 17 417 19 HOH HOH A . H 4 HOH 18 418 71 HOH HOH A . H 4 HOH 19 419 56 HOH HOH A . H 4 HOH 20 420 7 HOH HOH A . H 4 HOH 21 421 20 HOH HOH A . H 4 HOH 22 422 103 HOH HOH A . H 4 HOH 23 423 49 HOH HOH A . H 4 HOH 24 424 55 HOH HOH A . H 4 HOH 25 425 61 HOH HOH A . H 4 HOH 26 426 58 HOH HOH A . H 4 HOH 27 427 106 HOH HOH A . H 4 HOH 28 428 34 HOH HOH A . H 4 HOH 29 429 82 HOH HOH A . H 4 HOH 30 430 84 HOH HOH A . H 4 HOH 31 431 80 HOH HOH A . H 4 HOH 32 432 105 HOH HOH A . H 4 HOH 33 433 85 HOH HOH A . I 4 HOH 1 301 30 HOH HOH I . I 4 HOH 2 302 27 HOH HOH I . I 4 HOH 3 303 104 HOH HOH I . I 4 HOH 4 304 53 HOH HOH I . I 4 HOH 5 305 4 HOH HOH I . I 4 HOH 6 306 95 HOH HOH I . I 4 HOH 7 307 29 HOH HOH I . I 4 HOH 8 308 88 HOH HOH I . I 4 HOH 9 309 97 HOH HOH I . I 4 HOH 10 310 65 HOH HOH I . I 4 HOH 11 311 13 HOH HOH I . I 4 HOH 12 312 33 HOH HOH I . I 4 HOH 13 313 26 HOH HOH I . I 4 HOH 14 314 93 HOH HOH I . I 4 HOH 15 315 37 HOH HOH I . I 4 HOH 16 316 94 HOH HOH I . I 4 HOH 17 317 96 HOH HOH I . I 4 HOH 18 318 78 HOH HOH I . I 4 HOH 19 319 39 HOH HOH I . I 4 HOH 20 320 69 HOH HOH I . I 4 HOH 21 321 8 HOH HOH I . I 4 HOH 22 322 17 HOH HOH I . I 4 HOH 23 323 32 HOH HOH I . I 4 HOH 24 324 47 HOH HOH I . I 4 HOH 25 325 3 HOH HOH I . I 4 HOH 26 326 90 HOH HOH I . I 4 HOH 27 327 40 HOH HOH I . I 4 HOH 28 328 86 HOH HOH I . I 4 HOH 29 329 1 HOH HOH I . I 4 HOH 30 330 67 HOH HOH I . I 4 HOH 31 331 100 HOH HOH I . I 4 HOH 32 332 81 HOH HOH I . I 4 HOH 33 333 23 HOH HOH I . I 4 HOH 34 334 42 HOH HOH I . I 4 HOH 35 335 70 HOH HOH I . I 4 HOH 36 336 45 HOH HOH I . I 4 HOH 37 337 10 HOH HOH I . I 4 HOH 38 338 6 HOH HOH I . I 4 HOH 39 339 12 HOH HOH I . I 4 HOH 40 340 11 HOH HOH I . I 4 HOH 41 341 14 HOH HOH I . I 4 HOH 42 342 92 HOH HOH I . I 4 HOH 43 343 63 HOH HOH I . I 4 HOH 44 344 2 HOH HOH I . I 4 HOH 45 345 87 HOH HOH I . I 4 HOH 46 346 74 HOH HOH I . I 4 HOH 47 347 25 HOH HOH I . I 4 HOH 48 348 79 HOH HOH I . I 4 HOH 49 349 99 HOH HOH I . I 4 HOH 50 350 16 HOH HOH I . I 4 HOH 51 351 38 HOH HOH I . I 4 HOH 52 352 48 HOH HOH I . I 4 HOH 53 353 83 HOH HOH I . I 4 HOH 54 354 66 HOH HOH I . I 4 HOH 55 355 89 HOH HOH I . I 4 HOH 56 356 22 HOH HOH I . I 4 HOH 57 357 75 HOH HOH I . I 4 HOH 58 358 28 HOH HOH I . I 4 HOH 59 359 73 HOH HOH I . I 4 HOH 60 360 91 HOH HOH I . I 4 HOH 61 361 68 HOH HOH I . I 4 HOH 62 362 50 HOH HOH I . I 4 HOH 63 363 57 HOH HOH I . I 4 HOH 64 364 76 HOH HOH I . I 4 HOH 65 365 44 HOH HOH I . I 4 HOH 66 366 98 HOH HOH I . I 4 HOH 67 367 101 HOH HOH I . I 4 HOH 68 368 102 HOH HOH I . I 4 HOH 69 369 64 HOH HOH I . I 4 HOH 70 370 51 HOH HOH I . I 4 HOH 71 371 43 HOH HOH I . I 4 HOH 72 372 72 HOH HOH I . I 4 HOH 73 373 46 HOH HOH I . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 B MSE 67 I MSE 67 ? MET 'modified residue' 2 B MSE 117 I MSE 117 ? MET 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3740 ? 1 MORE -13 ? 1 'SSA (A^2)' 10700 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-09-13 2 'Structure model' 1 1 2017-09-27 3 'Structure model' 1 2 2019-12-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Author supporting evidence' 2 3 'Structure model' 'Author supporting evidence' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_audit_support 2 3 'Structure model' pdbx_audit_support # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_audit_support.funding_organization' 2 3 'Structure model' '_pdbx_audit_support.funding_organization' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 25.8078 -4.4478 25.9223 0.2921 0.6160 0.0236 -0.1803 0.0005 -0.0316 6.8465 10.3785 9.1741 3.2027 0.0702 -4.5115 -0.7239 1.5985 -0.0021 -1.3441 0.8897 0.1358 0.5706 -0.8909 -0.1658 'X-RAY DIFFRACTION' 2 ? refined 29.4561 -11.0214 28.2805 0.1251 0.1111 0.0874 -0.0372 0.0070 -0.0181 10.0971 2.4068 2.7369 -0.4557 -0.9254 0.0113 0.1086 0.1325 0.0546 -0.1688 -0.0504 -0.0226 0.3883 -0.1053 -0.0583 'X-RAY DIFFRACTION' 3 ? refined 39.2432 -11.6883 39.3332 0.1851 0.1380 0.2029 0.0664 0.0665 0.0989 5.1803 6.5327 2.8065 -2.7544 -0.3859 2.0914 -0.2473 -0.1698 -0.4915 -0.1319 0.1376 -0.4068 0.2569 0.5441 0.1097 'X-RAY DIFFRACTION' 4 ? refined 28.9235 0.9155 48.5547 0.3898 0.2774 0.3702 -0.0398 0.1042 -0.0216 5.0149 2.4891 1.9971 -3.5045 -3.1492 2.2277 0.1314 0.2126 0.0973 0.0100 -0.1445 0.0232 -0.0208 -0.1436 0.0131 'X-RAY DIFFRACTION' 5 ? refined 36.0127 -2.5937 35.3257 0.0724 0.0303 0.0103 -0.0272 0.0226 -0.0134 7.3473 0.5669 4.1086 0.9912 -3.2699 0.5455 -0.0018 -0.0003 0.1194 -0.0282 0.0564 -0.0087 0.0911 0.0367 -0.0546 'X-RAY DIFFRACTION' 6 ? refined 35.7448 -0.6572 27.8452 0.0858 0.0542 0.0194 0.0120 0.0046 -0.0018 11.4712 1.7811 1.3727 2.7082 -0.1962 -0.7106 -0.0949 0.3341 0.0534 -0.1543 0.0619 0.0176 0.0069 -0.0898 0.0330 'X-RAY DIFFRACTION' 7 ? refined 16.2814 -1.8201 37.0633 0.0582 0.0910 0.1207 -0.0322 -0.0183 0.0243 5.7676 4.9414 9.5981 -3.7345 0.7421 0.7798 -0.1430 -0.0647 -0.0597 -0.0565 0.0216 0.3281 -0.3509 -0.4786 0.1214 'X-RAY DIFFRACTION' 8 ? refined 22.5593 -9.1944 42.4627 0.1187 0.0113 0.0472 -0.0148 0.0500 0.0080 10.3144 11.5280 6.6734 -5.3259 5.2496 -8.6353 0.1479 -0.0776 -0.0937 0.0278 0.1209 0.4001 0.0198 -0.0891 -0.2688 'X-RAY DIFFRACTION' 9 ? refined 51.0834 1.7242 43.2742 0.0425 0.0980 0.0639 0.0154 0.0003 0.0184 3.2813 11.3782 2.7359 3.1174 2.5135 2.0204 0.0934 -0.0991 -0.1119 0.1168 -0.1312 0.0374 0.0951 0.1711 0.0378 'X-RAY DIFFRACTION' 10 ? refined 40.7762 11.1135 53.7745 0.0567 0.0399 0.0351 0.0199 -0.0163 0.0071 3.2343 1.8840 3.9776 -0.9823 -1.0720 -0.9578 -0.0434 -0.2674 -0.2291 0.1245 0.1067 0.0322 -0.0512 0.0916 -0.0634 'X-RAY DIFFRACTION' 11 ? refined 25.8932 11.8461 43.2140 0.1113 0.1404 0.1091 -0.0257 0.0378 -0.0236 1.5291 8.4782 1.5908 2.5945 -0.8586 -3.5680 -0.0788 -0.0337 -0.2958 -0.1084 0.0960 -0.1193 0.0600 -0.0986 -0.0172 'X-RAY DIFFRACTION' 12 ? refined 28.0565 21.3871 38.9856 0.0524 0.0917 0.0776 0.0080 -0.0108 -0.0109 5.4798 1.5514 8.5781 -0.5530 -2.4744 1.0904 -0.0050 -0.5136 0.4475 0.0274 0.1119 -0.0302 -0.1155 0.0991 -0.1070 'X-RAY DIFFRACTION' 13 ? refined 41.7284 19.4035 31.8414 0.0338 0.0539 0.0277 0.0060 0.0227 0.0210 9.9944 8.7683 4.2659 3.1356 1.8483 -0.1902 0.0574 0.3936 0.2064 -0.4858 -0.0094 -0.2628 0.0106 0.2682 -0.0480 'X-RAY DIFFRACTION' 14 ? refined 43.5948 25.5392 43.4009 0.2822 0.1748 0.1730 -0.0212 0.0239 -0.0058 8.6084 8.6425 6.3683 1.5321 5.5533 -3.8405 -0.2215 0.6288 0.4424 1.3999 -0.0926 0.0389 -0.9785 0.5275 0.3142 'X-RAY DIFFRACTION' 15 ? refined 42.4564 10.6371 42.7874 0.0820 0.0416 0.0182 0.0233 -0.0024 0.0006 2.4626 0.5519 3.2911 -0.9049 -1.0050 -0.3726 -0.0067 -0.1708 0.1606 0.0880 0.0693 -0.0583 -0.1482 0.1275 -0.0626 'X-RAY DIFFRACTION' 16 ? refined 35.4281 16.0401 36.3665 0.0837 0.0375 0.0735 0.0009 -0.0156 0.0213 3.6875 12.6132 5.0295 -1.8888 -2.0847 0.4207 0.1179 0.1388 0.4759 -0.5139 -0.0255 -0.0706 -0.5272 -0.0961 -0.0924 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 152 ? ? A 161 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 162 ? ? A 170 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 171 ? ? A 183 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 184 ? ? A 193 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 194 ? ? A 230 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 A 231 ? ? A 239 ? ? ? ? 'X-RAY DIFFRACTION' 7 7 A 240 ? ? A 245 ? ? ? ? 'X-RAY DIFFRACTION' 8 8 A 246 ? ? A 255 ? ? ? ? 'X-RAY DIFFRACTION' 9 9 I 2 ? ? I 11 ? ? ? ? 'X-RAY DIFFRACTION' 10 10 I 12 ? ? I 33 ? ? ? ? 'X-RAY DIFFRACTION' 11 11 I 34 ? ? I 42 ? ? ? ? 'X-RAY DIFFRACTION' 12 12 I 43 ? ? I 48 ? ? ? ? 'X-RAY DIFFRACTION' 13 13 I 49 ? ? I 59 ? ? ? ? 'X-RAY DIFFRACTION' 14 14 I 60 ? ? I 65 ? ? ? ? 'X-RAY DIFFRACTION' 15 15 I 66 ? ? I 112 ? ? ? ? 'X-RAY DIFFRACTION' 16 16 I 113 ? ? I 124 ? ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0155 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 4 ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? SBC-Collect ? ? ? . 5 # _pdbx_entry_details.compound_details ? _pdbx_entry_details.entry_id 5T86 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'The protein sequence for this particular strain is not yet in the UNP database' _pdbx_entry_details.source_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 242 ? ? -119.28 -169.28 2 1 ASP I 14 ? ? -159.69 88.23 3 1 ALA I 36 ? ? -172.46 147.99 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ILE 150 ? A ILE 1 2 1 Y 1 A GLU 151 ? A GLU 2 3 1 Y 1 I MSE 1 ? B MSE 1 4 1 Y 1 I HIS 125 ? B HIS 125 5 1 Y 1 I HIS 126 ? B HIS 126 6 1 Y 1 I HIS 127 ? B HIS 127 7 1 Y 1 I HIS 128 ? B HIS 128 8 1 Y 1 I HIS 129 ? B HIS 129 9 1 Y 1 I HIS 130 ? B HIS 130 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number GM115586 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ACETATE ION' ACT 4 water HOH #