HEADER OXIDOREDUCTASE 14-SEP-16 5TCE TITLE N-TERMINAL MICRODOMAIN OF 34-MERS FROM HSDHODH - N-T(DH) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDROOROTATE DEHYDROGENASE (QUINONE), MITOCHONDRIAL; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 32-65; COMPND 5 SYNONYM: DHODEHASE,DIHYDROOROTATE OXIDASE; COMPND 6 EC: 1.3.5.2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 4 ORGANISM_COMMON: HUMAN; SOURCE 5 ORGANISM_TAXID: 9606 KEYWDS MICELLES, OXIDOREDUCTASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR E.CRUSCA,C.E.MUNTE REVDAT 5 16-OCT-24 5TCE 1 REMARK REVDAT 4 14-JUN-23 5TCE 1 REMARK REVDAT 3 01-JAN-20 5TCE 1 REMARK REVDAT 2 17-APR-19 5TCE 1 REMARK REVDAT 1 20-SEP-17 5TCE 0 JRNL AUTH E.F.VICENTE,I.D.SAHU,A.J.COSTA-FILHO,E.M.CILLI,G.A.LORIGAN JRNL TITL CONFORMATIONAL CHANGES OF THE HSDHODH N-TERMINAL MICRODOMAIN JRNL TITL 2 VIA DEER SPECTROSCOPY. JRNL REF J PHYS CHEM B V. 119 8693 2015 JRNL REFN ISSN 1520-5207 JRNL PMID 26086954 JRNL DOI 10.1021/ACS.JPCB.5B01706 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5TCE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1000223735. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 310 REMARK 210 PH : 7.4 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : AMBIENT ATM REMARK 210 SAMPLE CONTENTS : 700 UM PEPTIDE, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H TOCSY; 2D DQF-COSY; 2D REMARK 210 1H-1H NOESY; 2D 1H-15N HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN, NMRVIEW, CYANA 2.1 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 500 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 2 -70.72 -141.62 REMARK 500 1 LEU A 10 -43.86 -130.22 REMARK 500 1 LEU A 18 24.94 -159.02 REMARK 500 2 ASP A 2 -70.18 -139.64 REMARK 500 2 LEU A 10 -43.32 -130.95 REMARK 500 2 LEU A 18 24.67 -157.87 REMARK 500 3 ASP A 2 -70.19 -139.49 REMARK 500 3 LEU A 10 -43.32 -131.04 REMARK 500 3 LEU A 18 25.11 -158.20 REMARK 500 4 ASP A 2 -69.54 -139.24 REMARK 500 4 LEU A 10 -43.32 -130.97 REMARK 500 4 LEU A 18 24.84 -158.17 REMARK 500 5 ASP A 2 -70.14 -139.24 REMARK 500 5 LEU A 10 -43.35 -130.91 REMARK 500 5 LEU A 18 27.55 -160.50 REMARK 500 6 ASP A 2 -70.21 -139.87 REMARK 500 6 LEU A 10 -43.02 -131.78 REMARK 500 6 LEU A 18 24.76 -157.44 REMARK 500 7 ASP A 2 -70.00 -138.89 REMARK 500 7 LEU A 10 -43.87 -130.38 REMARK 500 7 LEU A 18 27.05 -160.28 REMARK 500 8 ASP A 2 -70.19 -139.45 REMARK 500 8 LEU A 10 -43.18 -131.38 REMARK 500 8 LEU A 18 24.63 -157.86 REMARK 500 9 ASP A 2 -69.54 -139.52 REMARK 500 9 LEU A 10 -43.27 -131.00 REMARK 500 9 LEU A 18 24.67 -157.72 REMARK 500 10 ASP A 2 -70.16 -139.57 REMARK 500 10 LEU A 10 -43.25 -131.05 REMARK 500 10 LEU A 18 24.43 -158.22 REMARK 500 11 ASP A 2 -70.03 -139.25 REMARK 500 11 LEU A 10 -43.31 -130.98 REMARK 500 11 LEU A 18 24.43 -158.14 REMARK 500 11 LEU A 33 19.35 58.56 REMARK 500 12 ASP A 2 -70.24 -139.87 REMARK 500 12 LEU A 10 -43.24 -131.03 REMARK 500 12 LEU A 18 35.78 -162.61 REMARK 500 13 ASP A 2 -70.14 -139.59 REMARK 500 13 LEU A 10 -44.20 -134.82 REMARK 500 13 LEU A 18 22.05 -155.25 REMARK 500 14 ASP A 2 -70.09 -139.32 REMARK 500 14 LEU A 10 -43.20 -131.32 REMARK 500 14 LEU A 18 24.52 -158.56 REMARK 500 15 ASP A 2 -69.58 -139.40 REMARK 500 15 LEU A 10 -43.38 -130.86 REMARK 500 15 LEU A 18 30.20 -158.52 REMARK 500 15 PRO A 20 1.92 -69.85 REMARK 500 16 ASP A 2 -70.12 -139.34 REMARK 500 16 LEU A 10 -43.23 -130.99 REMARK 500 16 LEU A 18 23.57 -156.92 REMARK 500 REMARK 500 THIS ENTRY HAS 63 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30180 RELATED DB: BMRB REMARK 900 N-TERMINAL MICRODOMAIN OF 34-MERS FROM HSDHODH - N-T(DH) DBREF 5TCE A 1 34 UNP Q02127 PYRD_HUMAN 32 65 SEQADV 5TCE NH2 A 35 UNP Q02127 AMIDATION SEQRES 1 A 35 GLY ASP GLU ARG PHE TYR ALA GLU HIS LEU MET PRO THR SEQRES 2 A 35 LEU GLN GLY LEU LEU ASP PRO GLU SER ALA HIS ARG LEU SEQRES 3 A 35 ALA VAL ARG PHE THR SER LEU GLY NH2 HET NH2 A 35 3 HETNAM NH2 AMINO GROUP FORMUL 1 NH2 H2 N HELIX 1 AA1 LEU A 10 GLN A 15 1 6 HELIX 2 AA2 GLU A 21 SER A 32 1 12 LINK C GLY A 34 N NH2 A 35 1555 1555 1.23 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1